CmoCh02G005530 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G005530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRed chlorophyll catabolite reductase
LocationCmo_Chr02 : 3136909 .. 3140009 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAACGGCATCGTTTTGCTTAGATCCATTTCGATTGCCTTCTTCTTAATCATAAGGTCTCTCTTCTCCAACAAACTCCTTTCATTACCATCTTCAATCTCCCTTCCACCATTACTACACAACTCCATCCATATCCTCAACACCTCTTTCGAGATCGGACCGATTTCCTCACGGATAATCTCTTCCACACGCCCCGATTCGCTCTCCTCACACTTCACACTCACTAGAATTCCGGTCGACGAAACAACTTTTCGAAAGAAGAGCGACGACGAGAAGTACGGGCTTACTTCCGGCACGCTGTCGAGTCGGCGTCGATACTTCTCGAGCTCAGTTTCCTCGTAGAAAGTGGTGAGGTAGTCGGGATGGAGGACGATATCGACTCGAGGGATCAAATCGAGGAAGAAGATTAGAAAAGTAGGGCTGCATTGAACTAACTCGAATTGGAAATGAGGAATGTCGTTTGTGGTTTTCAGGTAGCCGGCGATGTTGGTTATGTTGAACGCGCCGCCGTGTGGTTGCTTTAAGTGTAACCAACTTGCAATCATGAAATCAATCTGAAATTCCGAGAAAGTTGGAACAATTTAATTTTTTTAAAAAAAATTAAATTACAACCAAAAGAAAGTTACCGGCGACGGTGGAAGGGCAGATCGGATGAGGAGAGTGCCCTGTGAAGTGCCGGGTTGGTTCTGATAATACTCTACATCCGACGGAACCGTCGACGGAAGTAGATGCTCTCCGACCCCATCATCGACGGCTTGGATTAAATCCACCATCAGATCTCTGTGCGCAGCCGTCAGATGCGGAAACTCCATCAGCTTCGACGCCGGCCGACCACTCCCCATCGCCGCGGACGGCAGCTCCGCCTTGATTACTTGCCGTGTTCTTCCTCTACTTCCTCCTTGGAAACGCAATGGTGGAAGACAATAACAAGCTCTTGGGACCAGCGTCAAGGTTGTCAAAGCCATTTGTGGCCTCTCATTGCTTCATTATCTTTATTTATTTATTTTATTTTTTATTCATAAAAAAATATATTTTAATCATTTTCATTTTCAAATTATTTATAAAGAGGAATGAAACACATTTATAATTATTTTTTAAATTTATTTATACAATTTTATTAAAATCTTTTTTTTTAAGCATAGTTTTTAATATTAAATATTAAAAATAAAAAAATATATACTAAAATTTTCATTTTAATTAGAATTTAGTTATTCACCACATACGAGGATCCATGGATCCATGCCTATGGGTGAGTAGTTATTCACCATTTTAATTAGAATTTAGTTATTCACCGTATAGGAGAATTAATTTAAAATATTTTAATATTGACGTAACAAAAGTAAAGTAGTTAATAATTAATTATTTAATATTAGCTAATGTAATAATTATTTTTTAAATAATTTGTTTATATTCGTAAATACAATTATTTGATTATATTATTCATTTTTTTGGAATTTTTTTCTAGACGCAATGAACAAAATTTTAAACTAAACAGAGTTGTGGGGCCCGAAGAAACCTAACTGAGCAGATATTTTCGTTATCCCTAATCCAATCCGAGCTATCCCATCTTCGACACGGATGAAAATAAGATGCCAAACATGGCGTTGATGGTTTATCCATCTGCAAAAGCTTTCAGTCTTCCGCCGCCGGTGGAATCCCGTTTCAGAGAATTAGTGATAAGGAACGCAGCGTCGAACATGGCGGAGAATGTGCCGATCCGGCCGGGATCGTCGTCGAAGCTGAAGGAGTTTCCACATCTGTCGGCTTCTCATAGAGCTCTGATGACTGATCTCGTCGGCGCCACTGAATCTCGACTCGAAGATCGTCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTGTATGCGTCTCTATGTCTCTGTCTCTTAAGAAATTTAGATAATCAAACTGTTTCGAGTGTACTCTGATCTGCTCCCAATTTTAGCGTTCCGGAATTGAGGATTTAAAATTTAAATTTCTTTCATAGTCTGCAGATCGATTAGATAGAAAATTGATTGTTTATGCATCTGTTAAATACTTTTTGAATCCAAATTTATCAAATCTCCAACGCTTAGCATGTTAGATACCACGGATTATTGAGTTATTACATTAATCAAAATCTCTAGCGGTTTGTAATTGTTTTGTTAAGCATTTGAACTAAAATTCTAATGTAAGTGTTTCCAACAAATCAAGAGTATGAGATAATTGTGAAAATTTTGTAGCAGCAGATCCAAATTCAAACTAACAAATTGGTAATGAGATTGTGTTCGTTATTTAATCTATGTTTCTTAACTTTTGTGTTAGATTAATTTCATATTGGGAAGTTGGTTGCATAGCCAGCTACCAACAGGAGCATCATTAAACATTGCAAGCCTTTCTGCCTACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGCTCAATCCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGCCATGTCCTCTCTCTTCTTCCGCTCCTTAGTTTCTCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGGACCCGAACGCATGGAGGAGATTATAGCGAACCATGTCGGTCCCGTTGCAAGAGATGTGATTCGGGTGTGGTTGGATGAATGTGCTTGCAAGGAGAGAGGGGTTGGAGAGATGGAAAGAGGGAACATTGAGAAGAGGGATGAGTTGGTTAAGAAGAAAACCATTGATATAGACTTGGGTTCTAGTTTGCCAAGATTGTTTGGCCAGGAAATAGCAGATAGAGTAGTGGCAGCCATCCAACAAATCTTTGAAGCATGAAATGGTTTTGCTTTGCTTGTTGGTTGTAAATGTATAATGTATTATTTAGATGCTTAATGAAGTTAATTTCATTTATGATTTTAGCGTTGAACGGATAAAAAGGTTAATAAGACTAAGTA

mRNA sequence

GCAACGGCATCGTTTTGCTTAGATCCATTTCGATTGCCTTCTTCTTAATCATAAGGTCTCTCTTCTCCAACAAACTCCTTTCATTACCATCTTCAATCTCCCTTCCACCATTACTACACAACTCCATCCATATCCTCAACACCTCTTTCGAGATCGGACCGATTTCCTCACGGATAATCTCTTCCACACGCCCCGATTCGCTCTCCTCACACTTCACACTCACTAGAATTCCGGTCGACGAAACAACTTTTCGAAAGAAGAGCGACGACGAGAAGTACGGGCTTACTTCCGGCACGCTGTCGAGTCGGCGTCGATACTTCTCGAGCTCAGTTTCCTCGTAGAAAGTGGTGAGGTAGTCGGGATGGAGGACGATATCGACTCGAGGGATCAAATCGAGGAAGAAGATTAGAAAAGTAGGGCTGCATTGAACTAACTCGAATTGGAAATGAGGAATGTCGTTTGTGGTTTTCAGGTAGCCGGCGATGTTGGTTATGTTGAACGCGCCGCCGTGTGGTTGCTTTAAGTGTAACCAACTTGCAATCATGAAATCAATCTGAAATTCCGAGAAAGTTGGAACAATTTAATTTTTTTAAAAAAAATTAAATTACAACCAAAAGAAAGTTACCGGCGACGGTGGAAGGGCAGATCGGATGAGGAGAGTGCCCTGTGAAGTGCCGGGTTGGTTCTGATAATACTCTACATCCGACGGAACCGTCGACGGAAGTAGATGCTCTCCGACCCCATCATCGACGGCTTGGATTAAATCCACCATCAGATCTCTGTGCGCAGCCGTCAGATGCGGAAACTCCATCAGCTTCGACGCCGGCCGACCACTCCCCATCGCCGCGGACGGCAGCTCCGCCTTGATTACTTGCCGTGTTCTTCCTCTACTTCCTCCTTGGAAACGCAATGGTGGAAGACAATAACAAGCTCTTGGGACCAGCGTCAAGAGTTGTGGGGCCCGAAGAAACCTAACTGAGCAGATATTTTCGTTATCCCTAATCCAATCCGAGCTATCCCATCTTCGACACGGATGAAAATAAGATGCCAAACATGGCGTTGATGGTTTATCCATCTGCAAAAGCTTTCAGTCTTCCGCCGCCGGTGGAATCCCGTTTCAGAGAATTAGTGATAAGGAACGCAGCGTCGAACATGGCGGAGAATGTGCCGATCCGGCCGGGATCGTCGTCGAAGCTGAAGGAGTTTCCACATCTGTCGGCTTCTCATAGAGCTCTGATGACTGATCTCGTCGGCGCCACTGAATCTCGACTCGAAGATCGTCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTATTAATTTCATATTGGGAAGTTGGTTGCATAGCCAGCTACCAACAGGAGCATCATTAAACATTGCAAGCCTTTCTGCCTACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGCTCAATCCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGCCATGTCCTCTCTCTTCTTCCGCTCCTTAGTTTCTCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGGACCCGAACGCATGGAGGAGATTATAGCGAACCATGTCGGTCCCGTTGCAAGAGATGTGATTCGGGTGTGGTTGGATGAATGTGCTTGCAAGGAGAGAGGGGTTGGAGAGATGGAAAGAGGGAACATTGAGAAGAGGGATGAGTTGGTTAAGAAGAAAACCATTGATATAGACTTGGGTTCTAGTTTGCCAAGATTGTTTGGCCAGGAAATAGCAGATAGAGTAGTGGCAGCCATCCAACAAATCTTTGAAGCATGAAATGGTTTTGCTTTGCTTGTTGGTTGTAAATGTATAATGTATTATTTAGATGCTTAATGAAGTTAATTTCATTTATGATTTTAGCGTTGAACGGATAAAAAGGTTAATAAGACTAAGTA

Coding sequence (CDS)

ATGCCAAACATGGCGTTGATGGTTTATCCATCTGCAAAAGCTTTCAGTCTTCCGCCGCCGGTGGAATCCCGTTTCAGAGAATTAGTGATAAGGAACGCAGCGTCGAACATGGCGGAGAATGTGCCGATCCGGCCGGGATCGTCGTCGAAGCTGAAGGAGTTTCCACATCTGTCGGCTTCTCATAGAGCTCTGATGACTGATCTCGTCGGCGCCACTGAATCTCGACTCGAAGATCGTCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTATTAATTTCATATTGGGAAGTTGGTTGCATAGCCAGCTACCAACAGGAGCATCATTAAACATTGCAAGCCTTTCTGCCTACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGCTCAATCCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGCCATGTCCTCTCTCTTCTTCCGCTCCTTAGTTTCTCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGGACCCGAACGCATGGAGGAGATTATAGCGAACCATGTCGGTCCCGTTGCAAGAGATGTGATTCGGGTGTGGTTGGATGAATGTGCTTGCAAGGAGAGAGGGGTTGGAGAGATGGAAAGAGGGAACATTGAGAAGAGGGATGAGTTGGTTAAGAAGAAAACCATTGATATAGACTTGGGTTCTAGTTTGCCAAGATTGTTTGGCCAGGAAATAGCAGATAGAGTAGTGGCAGCCATCCAACAAATCTTTGAAGCATGA
Homology
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BLAST of CmoCh02G005530 vs. Swiss-Prot
Match: RCCR_ARATH (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=RCCR PE=1 SV=2)

HSP 1 Score: 285.4 bits (729), Expect = 7.5e-76
Identity = 135/268 (50.37%), Postives = 194/268 (72.39%), Query Frame = 1 

Query: 50  KLKEFPHLSASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGS 109
           K  EFP++S + + LM DL+   E+RL+ +LLPC LPPDV  F N NG+++ +L IRSG 
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 110 PDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLP 169
             S I+F++GSW+H ++PTG SLNI S+S +L  ST APNF++E IQSS  SL+LILDLP
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 170 PRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTE 229
            RKDLVLNPDYL+ +Y+DT LD +R+++ +LPEV PY   SLF RS  SPT+ ++++D E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

Query: 230 SGGPERMEEIIANHVGPVARDVIRVWLDECACKERG---VGEMERGNIEKRDELVKKKTI 289
               +++EEI+ +HV P A++V+ VWL+ C  +E     VGE ER  +E+RD+  ++K+I
Sbjct: 231 E--EDKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 290

Query: 290 DIDLGSSLPRLFGQEIADRVVAAIQQIF 315
           + DL    PR+FG+E++ RVV AI++ F
Sbjct: 291 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316

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BLAST of CmoCh02G005530 vs. Swiss-Prot
Match: RCCR_HORVU (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-49
Identity = 94/201 (46.77%), Postives = 142/201 (70.65%), Query Frame = 1 

Query: 114 INFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD 173
           I+F+L S LH ++P GA ++I SL   L  STDAP+F++EFIQ SPTS++++LDL PRKD
Sbjct: 1   IDFMLQSSLHCKVPNGA-IDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKD 60

Query: 174 LVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGP 233
           L L+P+Y++ +YEDT +DK RK IE+LP+ RPY   SLF RS  SPT++   +D   GG 
Sbjct: 61  LALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGE 120

Query: 234 ERMEEIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSS 293
             +EEI+  H+  V + ++++WLD CA     + E ER  + KRD  V+ K+I++DL ++
Sbjct: 121 GTLEEIVHGHLASVVKGILQIWLDTCASDASEMEEGEREIMVKRDRTVRSKSIEVDLTAN 180

Query: 294 LPRLFGQEIADRVVAAIQQIF 315
           LPR+FG +++ R++A I++ F
Sbjct: 181 LPRMFGPDVSGRIIAEIRKAF 200

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BLAST of CmoCh02G005530 vs. TrEMBL
Match: D1MWY7_CITLA (Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris GN=CitRCCR PE=2 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 2.1e-141
Identity = 263/319 (82.45%), Postives = 282/319 (88.40%), Query Frame = 1 

Query: 4   MALMVYPSAKAFSLPPPVE------SRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MA MVY SAK FSLPPPV       +R    VIR+AAS+MAE      GSSSKLKEFPHL
Sbjct: 1   MASMVYASAKPFSLPPPVPVQSCFTARKPATVIRSAASHMAE------GSSSKLKEFPHL 60

Query: 64  SASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S SHRALM DL+GA E RLEDRLLPC LPPDVEY++NQ+GTS+GALL+RSGSPDSSINFI
Sbjct: 61  SGSHRALMADLIGAIEDRLEDRLLPCALPPDVEYYRNQSGTSEGALLVRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD+PPRKD VLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDMPPRKDPVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQLFYEDT LD YRK IEELPE RPY MSSL+FRSLVSPTSII RVDTESGGPERME
Sbjct: 181 PDYLQLFYEDTRLDTYRKTIEELPETRPYVMSSLYFRSLVSPTSIISRVDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NH+GPVARDV++VWL+ECACKER VG +ER ++EKRDELVKKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHIGPVARDVLQVWLNECACKEREVGMVERVDLEKRDELVKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFEA 317
           FGQEIADRVVAAIQQ+FEA
Sbjct: 301 FGQEIADRVVAAIQQVFEA 313

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BLAST of CmoCh02G005530 vs. TrEMBL
Match: A0A0A0LJH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285300 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.5e-139
Identity = 261/318 (82.08%), Postives = 278/318 (87.42%), Query Frame = 1 

Query: 4   MALMVYPSAKAFSLPP--PVESRFREL----VIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MALMVY SAK FSLPP  P +S FR      VIR+ AS+MAE      GSSSKLK+FPHL
Sbjct: 1   MALMVYASAKPFSLPPLVPAQSSFRATKPARVIRSTASHMAE------GSSSKLKDFPHL 60

Query: 64  SASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S+S RALM DL+ A E R EDRLLPCTLPPDVEY+QNQ+G S+GALLIRSGSPDSSINFI
Sbjct: 61  SSSQRALMGDLINAIEDRFEDRLLPCTLPPDVEYYQNQSGNSEGALLIRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQ FYEDT LD YRK IEELPE RPY MSSLFFRSLVSPTSII RVDTESGGPERME
Sbjct: 181 PDYLQSFYEDTRLDTYRKTIEELPEARPYIMSSLFFRSLVSPTSIISRVDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NHVGP+ARD++RVW+DECACKER VG MER  IEKRD L+KKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHVGPIARDMVRVWVDECACKEREVGMMERVEIEKRDGLIKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFE 316
           FGQE+ADRVVAAIQQ+F+
Sbjct: 301 FGQEVADRVVAAIQQVFD 312

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BLAST of CmoCh02G005530 vs. TrEMBL
Match: D7SVY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00680 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95
Identity = 173/298 (58.05%), Postives = 227/298 (76.17%), Query Frame = 1 

Query: 18  PPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSASHRALMTDLVGATESRLE 77
           PPP+ +         ++S+ +   P   G  S+  EFPH+SA HR LM +LV A E+RL+
Sbjct: 33  PPPIMAA--------SSSSPSLTDPQYGGGRSRFMEFPHVSAPHRDLMVELVSAVEARLD 92

Query: 78  DRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGSWLHSQLPTGASLNIASL 137
             LLPCTLPPDV+Y++NQ+GT+Q  L +RSG   S I+F+LGSW+H QLP+G +LNI SL
Sbjct: 93  SYLLPCTLPPDVQYYENQSGTAQATLHVRSGHDSSPIDFVLGSWIHCQLPSGGALNITSL 152

Query: 138 SAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDYLQLFYEDTGLDKYRKAI 197
           S YL PSTDAPNFLIE I+SSPTSL+LILDLPPRKDL L+PDYLQ FYEDT L+  R+ +
Sbjct: 153 STYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKDLALHPDYLQTFYEDTKLESRRQLL 212

Query: 198 EELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEIIANHVGPVARDVIRVWLD 257
           E++PE +PY  SSL+ R +VSPT+I+ R++TE+GG ERMEEI+ +HVGPVA +V+ +WLD
Sbjct: 213 EKIPESQPYFSSSLYIRCIVSPTAIMTRIETEAGGVERMEEILQSHVGPVAMEVLGIWLD 272

Query: 258 ECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRLFGQEIADRVVAAIQQIFE 316
           +CA  ER VG+ E   +EKRD L++ KTI+IDLGSSLPRLFG E A RV+ A++ +F+
Sbjct: 273 QCAFGEREVGDSEISYLEKRDRLIRSKTIEIDLGSSLPRLFGPETAGRVLEAMRGVFK 322

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BLAST of CmoCh02G005530 vs. TrEMBL
Match: A0A067GHQ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020001mg PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.0e-91
Identity = 179/321 (55.76%), Postives = 227/321 (70.72%), Query Frame = 1 

Query: 9   YPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSS---------SKLKEFPHLSA 68
           +PSA A     P  S+       + +S    N    P SS          K  EFP+ S 
Sbjct: 18  HPSAPACRYLSPSRSK------SSTSSTAKVNCSAAPSSSPMDSHNEGRKKFMEFPYASG 77

Query: 69  SHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILG 128
             R LM DLV   E+ L+ +LLPCTLPPDV+Y++NQNGT+Q +L IRSG   S I+FILG
Sbjct: 78  PVRQLMVDLVSTVENTLDSQLLPCTLPPDVQYYENQNGTAQASLQIRSGLKSSLIDFILG 137

Query: 129 SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPD 188
           SW+HS+LPTGA+LNI SLSAYL  STDAPN LIE IQSSP+SL+LILDL PRKDLVL+PD
Sbjct: 138 SWVHSELPTGAALNITSLSAYLNSSTDAPNLLIELIQSSPSSLVLILDLSPRKDLVLHPD 197

Query: 189 YLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTE----SGGPER 248
           YLQ FYE T LD+YR+ +E++PEVRPY  SSL+ R ++SP++I+VRVDTE    +G   R
Sbjct: 198 YLQTFYESTRLDEYRQMLEKVPEVRPYFSSSLYLRCVISPSAIMVRVDTETETGAGESTR 257

Query: 249 MEEIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLP 308
           ++ II NHV PVA+ VI +WL++CAC  R VGE ++  +EKRD L+K KTI+IDLGSS P
Sbjct: 258 LDYIITNHVHPVAKQVIGIWLNQCACGGRHVGESDKAYLEKRDGLIKNKTIEIDLGSSFP 317

Query: 309 RLFGQEIADRVVAAIQQIFEA 317
           RLFG ++A RV+  IQ++F A
Sbjct: 318 RLFGPQVASRVLGEIQKVFTA 332

[Close]
BLAST of CmoCh02G005530 vs. TrEMBL
Match: V4RWD5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026041mg PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.0e-91
Identity = 179/321 (55.76%), Postives = 227/321 (70.72%), Query Frame = 1 

Query: 9   YPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSS---------SKLKEFPHLSA 68
           +PSA A     P  S+       + +S    N    P SS          K  EFP+ S 
Sbjct: 18  HPSAPACRYLSPSRSK------SSTSSTAKVNCSAAPSSSPMDSHNEGRKKFMEFPYASG 77

Query: 69  SHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILG 128
             R LM DLV   E+ L+ +LLPCTLPPDV+Y++NQNGT+Q +L IRSG   S I+FILG
Sbjct: 78  PVRQLMVDLVSTVENTLDSQLLPCTLPPDVQYYENQNGTAQASLQIRSGLKSSLIDFILG 137

Query: 129 SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPD 188
           SW+HS+LPTGA+LNI SLSAYL  STDAPN LIE IQSSP+SL+LILDL PRKDLVL+PD
Sbjct: 138 SWVHSELPTGAALNITSLSAYLNSSTDAPNLLIELIQSSPSSLVLILDLSPRKDLVLHPD 197

Query: 189 YLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTE----SGGPER 248
           YLQ FYE T LD+YR+ +E++PEVRPY  SSL+ R ++SP++I+VRVDTE    +G   R
Sbjct: 198 YLQTFYESTRLDEYRQMLEKVPEVRPYFSSSLYLRCVISPSAIMVRVDTETETGAGESTR 257

Query: 249 MEEIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLP 308
           ++ II NHV PVA+ VI +WL++CAC  R VGE ++  +EKRD L+K KTI+IDLGSS P
Sbjct: 258 LDYIITNHVHPVAKQVIGIWLNQCACGGRHVGESDKAYLEKRDGLIKNKTIEIDLGSSFP 317

Query: 309 RLFGQEIADRVVAAIQQIFEA 317
           RLFG ++A RV+  IQ++F A
Sbjct: 318 RLFGPQVASRVLGEIQKVFTA 332

[Close]
BLAST of CmoCh02G005530 vs. TAIR10
Match: AT4G37000.1 (AT4G37000.1 accelerated cell death 2 (ACD2))

HSP 1 Score: 285.4 bits (729), Expect = 4.2e-77
Identity = 135/268 (50.37%), Postives = 194/268 (72.39%), Query Frame = 1 

Query: 50  KLKEFPHLSASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGS 109
           K  EFP++S + + LM DL+   E+RL+ +LLPC LPPDV  F N NG+++ +L IRSG 
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 110 PDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLP 169
             S I+F++GSW+H ++PTG SLNI S+S +L  ST APNF++E IQSS  SL+LILDLP
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 170 PRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTE 229
            RKDLVLNPDYL+ +Y+DT LD +R+++ +LPEV PY   SLF RS  SPT+ ++++D E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

Query: 230 SGGPERMEEIIANHVGPVARDVIRVWLDECACKERG---VGEMERGNIEKRDELVKKKTI 289
               +++EEI+ +HV P A++V+ VWL+ C  +E     VGE ER  +E+RD+  ++K+I
Sbjct: 231 E--EDKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 290

Query: 290 DIDLGSSLPRLFGQEIADRVVAAIQQIF 315
           + DL    PR+FG+E++ RVV AI++ F
Sbjct: 291 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316

[Close]
BLAST of CmoCh02G005530 vs. NCBI nr
Match: gi|270308988|dbj|BAI52947.1| (red chlorophyll catabolite reductase [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 510.0 bits (1312), Expect = 3.0e-141
Identity = 263/319 (82.45%), Postives = 282/319 (88.40%), Query Frame = 1 

Query: 4   MALMVYPSAKAFSLPPPVE------SRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MA MVY SAK FSLPPPV       +R    VIR+AAS+MAE      GSSSKLKEFPHL
Sbjct: 1   MASMVYASAKPFSLPPPVPVQSCFTARKPATVIRSAASHMAE------GSSSKLKEFPHL 60

Query: 64  SASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S SHRALM DL+GA E RLEDRLLPC LPPDVEY++NQ+GTS+GALL+RSGSPDSSINFI
Sbjct: 61  SGSHRALMADLIGAIEDRLEDRLLPCALPPDVEYYRNQSGTSEGALLVRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD+PPRKD VLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDMPPRKDPVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQLFYEDT LD YRK IEELPE RPY MSSL+FRSLVSPTSII RVDTESGGPERME
Sbjct: 181 PDYLQLFYEDTRLDTYRKTIEELPETRPYVMSSLYFRSLVSPTSIISRVDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NH+GPVARDV++VWL+ECACKER VG +ER ++EKRDELVKKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHIGPVARDVLQVWLNECACKEREVGMVERVDLEKRDELVKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFEA 317
           FGQEIADRVVAAIQQ+FEA
Sbjct: 301 FGQEIADRVVAAIQQVFEA 313

[Close]
BLAST of CmoCh02G005530 vs. NCBI nr
Match: gi|778669988|ref|XP_011649338.1| (PREDICTED: red chlorophyll catabolite reductase [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 2.1e-139
Identity = 261/318 (82.08%), Postives = 278/318 (87.42%), Query Frame = 1 

Query: 4   MALMVYPSAKAFSLPP--PVESRFREL----VIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MALMVY SAK FSLPP  P +S FR      VIR+ AS+MAE      GSSSKLK+FPHL
Sbjct: 1   MALMVYASAKPFSLPPLVPAQSSFRATKPARVIRSTASHMAE------GSSSKLKDFPHL 60

Query: 64  SASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S+S RALM DL+ A E R EDRLLPCTLPPDVEY+QNQ+G S+GALLIRSGSPDSSINFI
Sbjct: 61  SSSQRALMGDLINAIEDRFEDRLLPCTLPPDVEYYQNQSGNSEGALLIRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQ FYEDT LD YRK IEELPE RPY MSSLFFRSLVSPTSII RVDTESGGPERME
Sbjct: 181 PDYLQSFYEDTRLDTYRKTIEELPEARPYIMSSLFFRSLVSPTSIISRVDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NHVGP+ARD++RVW+DECACKER VG MER  IEKRD L+KKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHVGPIARDMVRVWVDECACKEREVGMMERVEIEKRDGLIKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFE 316
           FGQE+ADRVVAAIQQ+F+
Sbjct: 301 FGQEVADRVVAAIQQVFD 312

[Close]
BLAST of CmoCh02G005530 vs. NCBI nr
Match: gi|659116001|ref|XP_008457849.1| (PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 4.5e-137
Identity = 258/318 (81.13%), Postives = 277/318 (87.11%), Query Frame = 1 

Query: 4   MALMVYPSAKAFSLPPPV--ESRFR----ELVIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MALMVY SAK FSLP  V  +S FR      V+R+ +S+MAE      GSSSKLKEFPHL
Sbjct: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAE------GSSSKLKEFPHL 60

Query: 64  SASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S S RALM DL+ A E R EDRLLPCTLPPDVEY+QNQ+GTS+GALLIRSGSPDSSINFI
Sbjct: 61  STSQRALMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD VLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQ FYEDT LD YRK IEELPE RPY MSSLFFRSLVSPTSII R+DTESGGPERME
Sbjct: 181 PDYLQSFYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NHVGP+ARDV+RVW+DECACKER VG MER  +EKRD+LVKKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHVGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFE 316
           FGQE+ADRVVAAIQ++F+
Sbjct: 301 FGQEVADRVVAAIQRVFD 312

[Close]
BLAST of CmoCh02G005530 vs. NCBI nr
Match: gi|225438706|ref|XP_002277744.1| (PREDICTED: red chlorophyll catabolite reductase [Vitis vinifera])

HSP 1 Score: 357.5 bits (916), Expect = 2.5e-95
Identity = 173/298 (58.05%), Postives = 227/298 (76.17%), Query Frame = 1 

Query: 18  PPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSASHRALMTDLVGATESRLE 77
           PPP+ +         ++S+ +   P   G  S+  EFPH+SA HR LM +LV A E+RL+
Sbjct: 33  PPPIMAA--------SSSSPSLTDPQYGGGRSRFMEFPHVSAPHRDLMVELVSAVEARLD 92

Query: 78  DRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGSWLHSQLPTGASLNIASL 137
             LLPCTLPPDV+Y++NQ+GT+Q  L +RSG   S I+F+LGSW+H QLP+G +LNI SL
Sbjct: 93  SYLLPCTLPPDVQYYENQSGTAQATLHVRSGHDSSPIDFVLGSWIHCQLPSGGALNITSL 152

Query: 138 SAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDYLQLFYEDTGLDKYRKAI 197
           S YL PSTDAPNFLIE I+SSPTSL+LILDLPPRKDL L+PDYLQ FYEDT L+  R+ +
Sbjct: 153 STYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKDLALHPDYLQTFYEDTKLESRRQLL 212

Query: 198 EELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEIIANHVGPVARDVIRVWLD 257
           E++PE +PY  SSL+ R +VSPT+I+ R++TE+GG ERMEEI+ +HVGPVA +V+ +WLD
Sbjct: 213 EKIPESQPYFSSSLYIRCIVSPTAIMTRIETEAGGVERMEEILQSHVGPVAMEVLGIWLD 272

Query: 258 ECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRLFGQEIADRVVAAIQQIFE 316
           +CA  ER VG+ E   +EKRD L++ KTI+IDLGSSLPRLFG E A RV+ A++ +F+
Sbjct: 273 QCAFGEREVGDSEISYLEKRDRLIRSKTIEIDLGSSLPRLFGPETAGRVLEAMRGVFK 322

[Close]
BLAST of CmoCh02G005530 vs. NCBI nr
Match: gi|1009145038|ref|XP_015890117.1| (PREDICTED: red chlorophyll catabolite reductase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 352.8 bits (904), Expect = 6.1e-94
Identity = 176/306 (57.52%), Postives = 225/306 (73.53%), Query Frame = 1 

Query: 9   YPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSASHRALMTDL 68
           +PS  +FS   P         +   AS ++        +SS + EFP++S  HR LM DL
Sbjct: 10  HPSLSSFSSSKPYSLTSASPSLPLRASRLSRPRISASSTSSPIMEFPYVSPPHRDLMVDL 69

Query: 69  VGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGSWLHSQLPT 128
           +   E+RL+ +LLP TLPPDV+ FQNQ+GT+ G+L IRSG   S I+FILGSWLH +LPT
Sbjct: 70  LSTVETRLDSQLLPSTLPPDVQSFQNQSGTAHGSLHIRSGHDSSPIDFILGSWLHCELPT 129

Query: 129 GASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDYLQLFYEDT 188
           G +LNI SLS+YL  STDAPNFLIE IQSSPTSLILILDLPPRKDL L+PDYLQ FYEDT
Sbjct: 130 GGALNITSLSSYLNSSTDAPNFLIELIQSSPTSLILILDLPPRKDLALHPDYLQTFYEDT 189

Query: 189 GLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEIIANHVGPVA 248
            LD  R+ +E +PEV+PY  SSL+ RS+VSPT+I VR++ ++G   R+EEII  H+ P+A
Sbjct: 190 KLDAPRQTLEIIPEVKPYFSSSLYIRSVVSPTAITVRIEGDAGDSGRLEEIIKQHLDPIA 249

Query: 249 RDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRLFGQEIADRVVA 308
           + V+ +WLD+CA  +R VGE ER  +E RD+L+K KTI+IDLGS+ PRLFG+EIADRV+ 
Sbjct: 250 KQVLGIWLDQCASGKRQVGESERAGLENRDKLIKSKTIEIDLGSNFPRLFGREIADRVLG 309

Query: 309 AIQQIF 315
            IQ+IF
Sbjct: 310 TIQEIF 315

The following BLAST results are available for this feature:
BLAST of CmoCh02G005530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RCCR_ARATH7.5e-7650.37Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=R... [more]
RCCR_HORVU1.2e-4946.77Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 ... [more]
BLAST of CmoCh02G005530 vs. TrEMBL
Match NameE-valueIdentityDescription
D1MWY7_CITLA2.1e-14182.45Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris GN=Cit... [more]
A0A0A0LJH4_CUCSA1.5e-13982.08Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285300 PE=4 SV=1[more]
D7SVY1_VITVI1.7e-9558.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00680 PE=4 SV=... [more]
A0A067GHQ3_CITSI2.0e-9155.76Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020001mg PE=4 SV=1[more]
V4RWD5_9ROSI2.0e-9155.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026041mg PE=4 SV=1[more]
BLAST of CmoCh02G005530 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37000.14.2e-7750.37 accelerated cell death 2 (ACD2)[more]
BLAST of CmoCh02G005530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|270308988|dbj|BAI52947.1|3.0e-14182.45red chlorophyll catabolite reductase [Citrullus lanatus subsp. vulgaris][more]
gi|778669988|ref|XP_011649338.1|2.1e-13982.08PREDICTED: red chlorophyll catabolite reductase [Cucumis sativus][more]
gi|659116001|ref|XP_008457849.1|4.5e-13781.13PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo][more]
gi|225438706|ref|XP_002277744.1|2.5e-9558.05PREDICTED: red chlorophyll catabolite reductase [Vitis vinifera][more]
gi|1009145038|ref|XP_015890117.1|6.1e-9457.52PREDICTED: red chlorophyll catabolite reductase, chloroplastic-like [Ziziphus ju... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009439RCC_reductase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0008150 biological_process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006364 rRNA processing
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0015996 chlorophyll catabolic process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0051743 red chlorophyll catabolite reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G005530.1CmoCh02G005530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 61..311
score: 2.7E
NoneNo IPR availablePANTHERPTHR34685FAMILY NOT NAMEDcoord: 4..315
score: 3.4E
NoneNo IPR availablePANTHERPTHR34685:SF2RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 4..315
score: 3.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G005530Cucsa.367000Cucumber (Gy14) v1cgycmoB1019
CmoCh02G005530CmaCh02G005410Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G005530Cla020208Watermelon (97103) v1cmowmB598
CmoCh02G005530MELO3C020913Melon (DHL92) v3.5.1cmomeB544
CmoCh02G005530ClCG02G012600Watermelon (Charleston Gray)cmowcgB549
CmoCh02G005530Lsi10G005480Bottle gourd (USVL1VR-Ls)cmolsiB539
CmoCh02G005530Cp4.1LG05g11430Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G005530MELO3C020913.2Melon (DHL92) v3.6.1cmomedB622
CmoCh02G005530CsaV3_2G016720Cucumber (Chinese Long) v3cmocucB0693
CmoCh02G005530Cla97C02G038270Watermelon (97103) v2cmowmbB613
CmoCh02G005530Bhi10G001709Wax gourdcmowgoB0744
CmoCh02G005530CsGy2G014060Cucumber (Gy14) v2cgybcmoB226
CmoCh02G005530Carg11617Silver-seed gourdcarcmoB1422
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G005530Cucumber (Gy14) v1cgycmoB1020
CmoCh02G005530Wild cucumber (PI 183967)cmocpiB576
CmoCh02G005530Cucumber (Chinese Long) v2cmocuB571
CmoCh02G005530Melon (DHL92) v3.5.1cmomeB533
CmoCh02G005530Watermelon (Charleston Gray)cmowcgB532
CmoCh02G005530Watermelon (97103) v1cmowmB581
CmoCh02G005530Bottle gourd (USVL1VR-Ls)cmolsiB530
CmoCh02G005530Cucumber (Gy14) v2cgybcmoB217
CmoCh02G005530Melon (DHL92) v3.6.1cmomedB611
CmoCh02G005530Cucumber (Chinese Long) v3cmocucB0682
CmoCh02G005530Cucumber (Chinese Long) v3cmocucB0685
CmoCh02G005530Watermelon (97103) v2cmowmbB594