Cp4.1LG05g11430 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g11430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRed chlorophyll catabolite reductase
LocationCp4.1LG05 : 7736956 .. 7739456 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTAGTTTGAATTTGGTTCTGCTGCTACAAAATTTTCACAATTATCTCATACTCTTGATTTGTTAGAAACACTTACATTAGAATTTTAGTTTAAATGCTTAACAAAACAATTACATATCGCTAGAGATTTTGATTAATGTAATAACTCAATAATCCGTGGTATCTAACATGCTAAGCGTTGGAGATATGATAAATTTGGATTCAAAAAGTATTTAACAGATGCATAAACAATCAATTTTATATCTAATCGATCCGTAGACTATGAAAGAAATTTAAATNAGGCCACAAATGGCTCTGACAACCTTGACGCTGGTCCCAAGAGCTTGTTATTGTCTTCCACCACTGCGTTTCGGAGGAGGAAGAAGAAGAACACGGCAAGTAATCAAGGCGGAGCTGCCGTCCGCGGCGATGGGGAGTGGTCGGCCGGCGTCGAAGCTGATGGAGTTTCCGCATCTGACGGCTGCGCACAGAGATCTGATGGTGGATTTAATCCAAGCCGTCGATGATGGGGTCGGAGAGCATCTACTTCCGTCGACGGTTCCGTCAGATGTAGAGTATTATCAGAACCAAACCGGCACTTCACAGGGCACTCTCCTCATCCGATCTGCCCTTCCACCGTCGCCGGTAACTTTATTTTGGTTGTAATTATAAAAAGAATTTTAATTAAATTGTTCCAACTTTCTCGGAATTTCAGATTGATTTCGTGATTGCAAGTTGGTTACACTTAAAGCAACCACACGGCGGCGCGTTCAACATAACCAACATCGCCGGCTACCTGAAAACCACAAACGACATTCCTCATTTCCAATTCGAGTTAGTTCAATGCAGCCCTACTTTTCTAATTTTCTTCCTCGATTTGATCCCTCGAGTCGATATCGTCCTCCGTCCCGACTACCTCACAACTTTCTACGAGGAGACTGAGCTCGAGAAGTATCGACGCCGACTCGATGCCGTGTCGGAAGTAAGCCCGTACTTCTCGTCGTCACTCTTCTTTCGAAAAGTTGTTTCGTCGACGGGAATTCTAGTGAGTGTGAAGTGCGAGGAGAGCGAGTCGGGGCGTGTGGAAGAGATTATCCGTGAGGAAATCGGTCCGATCTCGAAGGAGGTGTTGAGGATATGGATGGAGTTGTGTAGTAATGGAGGAAGGGAGATTGAAGATGGTAATGAAAGGAGTTTGTTGGAGAAGAGAGATCTTATGATTAAGAAGAAGGCAATTGAAATGGATCTAAGCAAAACGATGCCGTTGCAATTTGGAGAAGAAGTTGCGGAGAGAGTTCTTCGAGTGATTAGAAGTGCTTTCAGAACCGCTTAATTTCGAGATATTAAATGTTTAGCGATTGTATTTAAGGTCTAAGCGAGTTACAATGTGATTAGCTCTATCTGAAATTATAACGTGATAGGTGACAAATGAAAGTACGCACACATTTGTAACGTTGGCTTTGATGTGTATTGTCAAATATGAAACGTCGATACATTAGGAAGTAACGACGTGTTGTGGCATGCTGATTGTTATCGATTCTTAAAGAATCATGTTTTCTCTAGTTATGGAACACCATGCACTTTAACGAGTGACAAGGGCACTTGTTCTCTCTTGTTTTTCGTATTCTTCATCTAAATTGAGTATGTGAGTTATGTGATCTTAAAAATTGGTATCAAAGTTTGGAGAGATTTACCACGATATGTGAANAATTTGTTGGAGAAGAGAGATCTTATGATTAAGAAGAAAGCAATCGAAATGGATCTAAGCAAAACGATGCCGTTGCAATTTGGAGAAGAAGTTGCCGAGAGAGTTCTTCGAGTTATTAGAAGTGCTTTCAGAACCGCTTAATTTCAAGATATTAAATGTTTAGCGATTGTATTTAAGGTCTAAGCGAGTTACAATGTGATTAGCTCTATCTGAAATTATAACGTGATAGGTGACAAATGAAAGTACGCACACATTTGTAACGTTGGCTTTGGTGTGTATTGTCAAATATGTAACGTCGAGACATTAGGAAGTAACGACGTGTTGTGGCATGCTGATTGTTATCGATTCTTAAAGAATCATGTTTTCTTTAGTTATGGAACACCATGCACTTTAACGAGTGACAAGTGCACTTGTTCTCTCTTGTTTTTCGTATTTTTCATCTAAATCGAGTATGTGAGTTATGTGATTTAAGAATTGGTATCAAAGTTTGGAGAGATTTACCACGATATGTGAAGATGGAAAGCTTAAAGATCGAAATCGAGAACTTTGCTAGATATGATTGCGGTTTCTGCAAGATCAGATTGAAGATTATTTGTACTAGAGAGATCTTCAAGAACCCTTGTCCGAGGTGAAGTCGAATTCCATGACCATGGAGGAGCGAAAGCTCAAGGATTGAAGGCTCTAGGGTTTATTCGGTTAATGTTGACAAAAAAATGTGGCAATCAACATCGTCAAGGAGAAGACAACGTCGGATCTGTTTGAAGGCGTTGTAAAATATGTATGAAAAGTCATAGACTATAAACAAGCTATAGT

mRNA sequence

TGTTAGTTTGAATTTGGTTCTGCTGCTACAAAATTTTCACAATTATCTCATACTCTTGATTTGTTAGAAACACTTACATTAGAATTTTAGTTTAAATGCTTAACAAAACAATTACATATCGCTAGAGATTTTGATTAATGTAATAACTCAATAATCCGTGGTATCTAACATGCTAAGCGTTGGAGATATGATAAATTTGGATTCAAAAAGTATTTAACAGATGCATAAACAATCAATTTTATATCTAATCGATCCGTAGACTATGAAAGAAATTTAAATNAGGCCACAAATGGCTCTGACAACCTTGACGCTGGTCCCAAGAGCTTGTTATTGTCTTCCACCACTGCGTTTCGGAGGAGGAAGAAGAAGAACACGGCAAGTAATCAAGGCGGAGCTGCCGTCCGCGGCGATGGGGAGTGGTCGGCCGGCGTCGAAGCTGATGGAGTTTCCGCATCTGACGGCTGCGCACAGAGATCTGATGGTGGATTTAATCCAAGCCGTCGATGATGGGGTCGGAGAGCATCTACTTCCGTCGACGGTTCCGTCAGATGTAGAGTATTATCAGAACCAAACCGGCACTTCACAGGGCACTCTCCTCATCCGATCTGCCCTTCCACCGTCGCCGATTGATTTCGTGATTGCAAGTTGGTTACACTTAAAGCAACCACACGGCGGCGCGTTCAACATAACCAACATCGCCGGCTACCTGAAAACCACAAACGACATTCCTCATTTCCAATTCGAGTTAGTTCAATGCAGCCCTACTTTTCTAATTTTCTTCCTCGATTTGATCCCTCGAGTCGATATCGTCCTCCGTCCCGACTACCTCACAACTTTCTACGAGGAGACTGAGCTCGAGAAGTATCGACGCCGACTCGATGCCGTGTCGGAAGTAAGCCCGTACTTCTCGTCGTCACTCTTCTTTCGAAAAGTTGTTTCGTCGACGGGAATTCTAGTGAGTGTGAAGTGCGAGGAGAGCGAGTCGGGGCGTGTGGAAGAGATTATCCGTGAGGAAATCGGTCCGATCTCGAAGGAGGTGTTGAGGATATGGATGGAGTTGTGTAGTAATGGAGGAAGGGAGATTGAAGATGGTAATGAAAGGAGTTTGTTGGAGAAGAGAGATCTTATGATTAAGAAGAAGGCAATTGAAATGGATCTAAGCAAAACGATGCCGTTGCAATTTGGAGAAGAAGTTGCGGAGAGAGTTCTTCGAGTGATTAGAAGTGCTTTCAGAACCGCTTAATTTCGAGATATTAAATGTTTAGCGATTGTATTTAAGGTCTAAGCGAGTTACAATGTGATTAGCTCTATCTGAAATTATAACGTGATAGGTGACAAATGAAAGTACGCACACATTTGTAACGTTGGCTTTGATGTGTATTGTCAAATATGAAACGTCGATACATTAGGAAGTAACGACGTGTTGTGGCATGCTGATTGTTATCGATTCTTAAAGAATCATGTTTTCTCTAGTTATGGAACACCATGCACTTTAACGAGTGACAAGGGCACTTGTTCTCTCTTGTTTTTCGTATTCTTCATCTAAATTGAGTATGTGAGTTATGTGATCTTAAAAATTGGTATCAAAGTTTGGAGAGATTTACCACGATATGTGAANAATTTGTTGGAGAAGAGAGATCTTATGATTAAGAAGAAAGCAATCGAAATGGATCTAAGCAAAACGATGCCGTTGCAATTTGGAGAAGAAGTTGCCGAGAGAGTTCTTCGAGTTATTAGAAGTGCTTTCAGAACCGCTTAATTTCAAGATATTAAATGTTTAGCGATTGTATTTAAGGTCTAAGCGAGTTACAATGTGATTAGCTCTATCTGAAATTATAACGTGATAGGTGACAAATGAAAGTACGCACACATTTGTAACGTTGGCTTTGGTGTGTATTGTCAAATATGTAACGTCGAGACATTAGGAAGTAACGACGTGTTGTGGCATGCTGATTGTTATCGATTCTTAAAGAATCATGTTTTCTTTAGTTATGGAACACCATGCACTTTAACGAGTGACAAGTGCACTTGTTCTCTCTTGTTTTTCGTATTTTTCATCTAAATCGAGTATGTGAGTTATGTGATTTAAGAATTGGTATCAAAGTTTGGAGAGATTTACCACGATATGTGAAGATGGAAAGCTTAAAGATCGAAATCGAGAACTTTGCTAGATATGATTGCGGTTTCTGCAAGATCAGATTGAAGATTATTTGTACTAGAGAGATCTTCAAGAACCCTTGTCCGAGGTGAAGTCGAATTCCATGACCATGGAGGAGCGAAAGCTCAAGGATTGAAGGCTCTAGGGTTTATTCGGTTAATGTTGACAAAAAAATGTGGCAATCAACATCGTCAAGGAGAAGACAACGTCGGATCTGTTTGAAGGCGTTGTAAAATATGTATGAAAAGTCATAGACTATAAACAAGCTATAGT

Coding sequence (CDS)

ATGGCTCTGACAACCTTGACGCTGGTCCCAAGAGCTTGTTATTGTCTTCCACCACTGCGTTTCGGAGGAGGAAGAAGAAGAACACGGCAAGTAATCAAGGCGGAGCTGCCGTCCGCGGCGATGGGGAGTGGTCGGCCGGCGTCGAAGCTGATGGAGTTTCCGCATCTGACGGCTGCGCACAGAGATCTGATGGTGGATTTAATCCAAGCCGTCGATGATGGGGTCGGAGAGCATCTACTTCCGTCGACGGTTCCGTCAGATGTAGAGTATTATCAGAACCAAACCGGCACTTCACAGGGCACTCTCCTCATCCGATCTGCCCTTCCACCGTCGCCGATTGATTTCGTGATTGCAAGTTGGTTACACTTAAAGCAACCACACGGCGGCGCGTTCAACATAACCAACATCGCCGGCTACCTGAAAACCACAAACGACATTCCTCATTTCCAATTCGAGTTAGTTCAATGCAGCCCTACTTTTCTAATTTTCTTCCTCGATTTGATCCCTCGAGTCGATATCGTCCTCCGTCCCGACTACCTCACAACTTTCTACGAGGAGACTGAGCTCGAGAAGTATCGACGCCGACTCGATGCCGTGTCGGAAGTAAGCCCGTACTTCTCGTCGTCACTCTTCTTTCGAAAAGTTGTTTCGTCGACGGGAATTCTAGTGAGTGTGAAGTGCGAGGAGAGCGAGTCGGGGCGTGTGGAAGAGATTATCCGTGAGGAAATCGGTCCGATCTCGAAGGAGGTGTTGAGGATATGGATGGAGTTGTGTAGTAATGGAGGAAGGGAGATTGAAGATGGTAATGAAAGGAGTTTGTTGGAGAAGAGAGATCTTATGATTAAGAAGAAGGCAATTGAAATGGATCTAAGCAAAACGATGCCGTTGCAATTTGGAGAAGAAGTTGCGGAGAGAGTTCTTCGAGTGATTAGAAGTGCTTTCAGAACCGCTTAA

Protein sequence

MALTTLTLVPRACYCLPPLRFGGGRRRTRQVIKAELPSAAMGSGRPASKLMEFPHLTAAHRDLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSALPPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVLRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCEESESGRVEEIIREEIGPISKEVLRIWMELCSNGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKTMPLQFGEEVAERVLRVIRSAFRTA
Homology
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BLAST of Cp4.1LG05g11430 vs. Swiss-Prot
Match: RCCR_ARATH (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=RCCR PE=1 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 6.6e-56
Identity = 113/268 (42.16%), Postives = 166/268 (61.94%), Query Frame = 1 

Query: 49  KLMEFPHLTAAHRDLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSAL 108
           K MEFP+++   + LMVDL+  V++ +   LLP  +P DV  + N  G+++ +L IRS  
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 109 PPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLI 168
             SPIDFVI SW+H K P G + NIT+I+G+L ++   P+F  EL+Q S   L+  LDL 
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 169 PRVDIVLRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCE 228
            R D+VL PDYL  +Y++T L+ +R+ L  + EV+PY S SLF R   S T  ++ +  E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

Query: 229 ESESGRVEEIIREEIGPISKEVLRIWMELCSNGGRE--IEDGNERSLLEKRDLMIKKKAI 288
           E +  ++EEI+R+ + P +KEVL +W+E C     E  +    ER  LE+RD   ++K+I
Sbjct: 231 EED--KLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 290

Query: 289 EMDLSKTMPLQFGEEVAERVLRVIRSAF 315
           E DL    P  FGEEV+ RV+  I+ AF
Sbjct: 291 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316

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BLAST of Cp4.1LG05g11430 vs. Swiss-Prot
Match: RCCR_HORVU (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-39
Identity = 78/202 (38.61%), Postives = 129/202 (63.86%), Query Frame = 1 

Query: 113 IDFVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRVD 172
           IDF++ S LH K P+G A +IT++   L  + D PHF  E +Q SPT ++  LDL+PR D
Sbjct: 1   IDFMLQSSLHCKVPNG-AIDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKD 60

Query: 173 IVLRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCEESES 232
           + L P+Y+  +YE+TE++K R+ ++ + +  PY S SLF R   S T +  ++ C +   
Sbjct: 61  LALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGE 120

Query: 233 GRVEEIIREEIGPISKEVLRIWMELCSNGGREIEDGNERSLLEKRDLMIKKKAIEMDLSK 292
           G +EEI+   +  + K +L+IW++ C++   E+E+G ER ++ KRD  ++ K+IE+DL+ 
Sbjct: 121 GTLEEIVHGHLASVVKGILQIWLDTCASDASEMEEG-EREIMVKRDRTVRSKSIEVDLTA 180

Query: 293 TMPLQFGEEVAERVLRVIRSAF 315
            +P  FG +V+ R++  IR AF
Sbjct: 181 NLPRMFGPDVSGRIIAEIRKAF 200

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BLAST of Cp4.1LG05g11430 vs. TrEMBL
Match: Q1ELT6_CITLA (Red chlorophyll catabolite reductase (Fragment) OS=Citrullus lanatus GN=rccr PE=2 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.5e-134
Identity = 254/316 (80.38%), Postives = 280/316 (88.61%), Query Frame = 1 

Query: 8   LVPRACYC--LPPLRFGGGRRRTRQVIKAELPSAAM----GSGRPASKLMEFPHLTAAHR 67
           LV RACY   LPPLRF   +  +R+V+KA LPS+      G G   SKLMEFPHLTAAHR
Sbjct: 1   LVSRACYFVPLPPLRFQT-KSSSRRVLKAALPSSEKMRSGGRGAAESKLMEFPHLTAAHR 60

Query: 68  DLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSALPPSPIDFVIASWL 127
           DLMVDLIQ V++GVGEHLLPSTVP DVEYY+NQ+GTSQGTLLIRSAL  SPIDF+IASWL
Sbjct: 61  DLMVDLIQGVENGVGEHLLPSTVPPDVEYYENQSGTSQGTLLIRSALQSSPIDFMIASWL 120

Query: 128 HLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVLRPDYLT 187
           HL+QP GGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PR DIVLRPDYL 
Sbjct: 121 HLEQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIVLRPDYLV 180

Query: 188 TFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCEESESGRVEEIIRE 247
           T+YEET LEK+R++L A+ EVSPYFSSSL+FRKVVSSTGILVSVKCEES+S RVEEI+RE
Sbjct: 181 TYYEETGLEKHRQQLAALPEVSPYFSSSLYFRKVVSSTGILVSVKCEESKSERVEEIVRE 240

Query: 248 EIGPISKEVLRIWMELCSNGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKTMPLQFGEE 307
           EIGPISKEV+RIWMELC NGGREIE+  ERSL+EKRDLMIKKKAIEMDLSKTMPLQFGEE
Sbjct: 241 EIGPISKEVMRIWMELCMNGGREIEE-EERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEE 300

Query: 308 VAERVLRVIRSAFRTA 318
           VA RVL+VIRSAF+TA
Sbjct: 301 VANRVLQVIRSAFKTA 314

[Close]
BLAST of Cp4.1LG05g11430 vs. TrEMBL
Match: A0A0A0LLX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285290 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.4e-129
Identity = 247/324 (76.23%), Postives = 282/324 (87.04%), Query Frame = 1 

Query: 1   MALTTLTLVPRACYCLP--PLRFGGGRRRTRQVIKAELPSAA-MGSG---RPASKLMEFP 60
           M L  + L+  A   +P  PLRF   +R ++ V+KA   S+  M SG    P SKLMEFP
Sbjct: 1   MGLLAVNLISSASCFVPHSPLRFQA-KRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFP 60

Query: 61  HLTAAHRDLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSALPPSPID 120
           HLTA+HRDLMVDLI+ V++G+G+HLLPSTVP+DVEYY+NQ GTSQGTLLIRSALP SPID
Sbjct: 61  HLTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPID 120

Query: 121 FVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRVDIV 180
           F+IASWLHLKQP GGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PR DI+
Sbjct: 121 FMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDII 180

Query: 181 LRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCEESESGR 240
           LRPDYLTT+YE+T LEK R+RL A+ EVSPYFSSSL+FRKVVSSTGILV VKC+ESES R
Sbjct: 181 LRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKR 240

Query: 241 VEEIIREEIGPISKEVLRIWMELC-SNGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKT 300
           VEEII+EEIGPISKEV+RIWMELC +NGGRE+E+ +ERSL+EKRDLMIKKKAIEMDLSKT
Sbjct: 241 VEEIIQEEIGPISKEVMRIWMELCLNNGGRELEE-DERSLMEKRDLMIKKKAIEMDLSKT 300

Query: 301 MPLQFGEEVAERVLRVIRSAFRTA 318
           MPLQFGEEVA RVL+VIRSAF+TA
Sbjct: 301 MPLQFGEEVANRVLQVIRSAFKTA 322

[Close]
BLAST of Cp4.1LG05g11430 vs. TrEMBL
Match: C6L812_CUCSA (Putative red chlorophyll catabolite reductase (Fragment) OS=Cucumis sativus GN=CsRCCR PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-94
Identity = 178/210 (84.76%), Postives = 196/210 (93.33%), Query Frame = 1 

Query: 83  TVPSDVEYYQNQTGTSQGTLLIRSALPPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKT 142
           TVP DVEYY+NQ GTSQGTLLIRSALP SPIDF+IASWLHLKQP GGAFNITNIAGYLK 
Sbjct: 1   TVPPDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP 60

Query: 143 TNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVLRPDYLTTFYEETELEKYRRRLDAVSEV 202
           +NDIPHFQFELVQCSPTFLIFFLDL+PR DI+LRPDYLTT+YE+T LEK R+RL A+ EV
Sbjct: 61  SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV 120

Query: 203 SPYFSSSLFFRKVVSSTGILVSVKCEESESGRVEEIIREEIGPISKEVLRIWMELC-SNG 262
           SPYFSSSL+FRKVVSSTGILV VKC+ESES RVEEII+EEIGPISKEV+RIWMELC +NG
Sbjct: 121 SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG 180

Query: 263 GREIEDGNERSLLEKRDLMIKKKAIEMDLS 292
           GRE+E+ +ERSL+EKRDLMIKKKAIEMDLS
Sbjct: 181 GRELEE-DERSLMEKRDLMIKKKAIEMDLS 209

[Close]
BLAST of Cp4.1LG05g11430 vs. TrEMBL
Match: B9HH31_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11040g PE=4 SV=2)

HSP 1 Score: 332.0 bits (850), Expect = 7.8e-88
Identity = 174/296 (58.78%), Postives = 214/296 (72.30%), Query Frame = 1 

Query: 26  RRTRQVIKA-ELPSAAMGSGRPASKLMEFPHLTAAHRDLMVDLIQAVDDGVGEHLLPST- 85
           R+ R  I+A     + M       +LMEFPHL A H+DLMV LI AVD  +  HLLPS+ 
Sbjct: 27  RKIRNSIRALSTTPSEMEQPMRGQRLMEFPHLLAPHKDLMVGLISAVDKRLHGHLLPSSA 86

Query: 86  -VPSDVEYYQNQTGTSQGTLLIRSALPPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKT 145
            VP D EYYQNQ+G SQG+L I   +  S IDF++ SWLHL  P+GGA +ITNI GYLK+
Sbjct: 87  SVPPDAEYYQNQSGASQGSLCINRGVDSSHIDFILTSWLHLSLPNGGAMDITNIQGYLKS 146

Query: 146 TNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVLRPDYLTTFYEETELEKYRRRLDA-VSE 205
           + D PHFQFELVQCSPT+ IFFLDLIPR D+VL PDYL TFYE+++LE  R++LD  V E
Sbjct: 147 STDAPHFQFELVQCSPTYFIFFLDLIPRKDLVLHPDYLKTFYEDSQLEALRKQLDTQVLE 206

Query: 206 VSPYFSSSLFFRKVVSSTGILVSVKCEE-SESGRVEEIIREEIGPISKEVLRIWMELC-S 265
             PYFSSSL+FR VVS TGILVS+ CE+   + R EEIIR+ I PI+ EVL +WM+ C  
Sbjct: 207 AKPYFSSSLYFRNVVSPTGILVSITCEDGGTTERAEEIIRDNIDPIANEVLELWMDSCVC 266

Query: 266 NGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKTMPLQFGEEVAERVLRVIRSAFR 316
            GG  I + NER  LEKRD MIK +A+EMDLS +MP+QFG++VA+R+L VIR  FR
Sbjct: 267 KGGTAIIEENERDHLEKRDRMIKSRAVEMDLSSSMPIQFGQDVADRILGVIRGVFR 322

[Close]
BLAST of Cp4.1LG05g11430 vs. TrEMBL
Match: V4SF05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026248mg PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 8.9e-84
Identity = 165/268 (61.57%), Postives = 201/268 (75.00%), Query Frame = 1 

Query: 49  KLMEFPHLTAAHRDLMVDLIQAVDDGVGEHLLPST-VPSDVEYYQNQTGTSQGTLLIRSA 108
           K MEFPHLTAAH+DLMV LI A++  +  HLL S+ VP DVE+YQN  GTSQG+L IR  
Sbjct: 10  KPMEFPHLTAAHKDLMVSLISALETRLDSHLLASSAVPPDVEFYQNDQGTSQGSLHIRRG 69

Query: 109 LPPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDL 168
           LP S IDFV+ASWLHLK P G A NITN+  YLK++ D+PHFQFELVQCSPT+ I FLD+
Sbjct: 70  LPSSHIDFVLASWLHLKVPTGSAMNITNLQAYLKSSTDVPHFQFELVQCSPTYFILFLDV 129

Query: 169 IPRVDIVLRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKC 228
            PR D+VL P+YL TFYEE +LE  R+RL+ V E  PY SSSL+FR VVS TGILVS+KC
Sbjct: 130 TPRKDLVLYPNYLKTFYEEAQLETLRQRLEQVPETKPYLSSSLYFRGVVSPTGILVSIKC 189

Query: 229 EE-SESGRVEEIIREEIGPISKEVLRIWMELCSNGGREIEDGNERSLLEKRDLMIKKKAI 288
           EE   + R EEIIRE + PI+ +V+ IW+E   +G        ER+ LEKRDL++K +AI
Sbjct: 190 EEVGGTDRCEEIIREHVSPIAHDVMVIWLEKYFSGA--TVGVTERAELEKRDLLVKTRAI 249

Query: 289 EMDLSKTMPLQFGEEVAERVLRVIRSAF 315
           EMDLS ++PLQFG+EVA RVL VI+  F
Sbjct: 250 EMDLSSSLPLQFGQEVANRVLDVIKGVF 275

[Close]
BLAST of Cp4.1LG05g11430 vs. TAIR10
Match: AT4G37000.1 (AT4G37000.1 accelerated cell death 2 (ACD2))

HSP 1 Score: 219.2 bits (557), Expect = 3.7e-57
Identity = 113/268 (42.16%), Postives = 166/268 (61.94%), Query Frame = 1 

Query: 49  KLMEFPHLTAAHRDLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSAL 108
           K MEFP+++   + LMVDL+  V++ +   LLP  +P DV  + N  G+++ +L IRS  
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 109 PPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLI 168
             SPIDFVI SW+H K P G + NIT+I+G+L ++   P+F  EL+Q S   L+  LDL 
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 169 PRVDIVLRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCE 228
            R D+VL PDYL  +Y++T L+ +R+ L  + EV+PY S SLF R   S T  ++ +  E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

Query: 229 ESESGRVEEIIREEIGPISKEVLRIWMELCSNGGRE--IEDGNERSLLEKRDLMIKKKAI 288
           E +  ++EEI+R+ + P +KEVL +W+E C     E  +    ER  LE+RD   ++K+I
Sbjct: 231 EED--KLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 290

Query: 289 EMDLSKTMPLQFGEEVAERVLRVIRSAF 315
           E DL    P  FGEEV+ RV+  I+ AF
Sbjct: 291 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316

[Close]
BLAST of Cp4.1LG05g11430 vs. NCBI nr
Match: gi|106880172|emb|CAJ80768.1| (red chlorophyll catabolite reductase [Citrullus lanatus])

HSP 1 Score: 487.3 bits (1253), Expect = 2.1e-134
Identity = 254/316 (80.38%), Postives = 280/316 (88.61%), Query Frame = 1 

Query: 8   LVPRACYC--LPPLRFGGGRRRTRQVIKAELPSAAM----GSGRPASKLMEFPHLTAAHR 67
           LV RACY   LPPLRF   +  +R+V+KA LPS+      G G   SKLMEFPHLTAAHR
Sbjct: 1   LVSRACYFVPLPPLRFQT-KSSSRRVLKAALPSSEKMRSGGRGAAESKLMEFPHLTAAHR 60

Query: 68  DLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSALPPSPIDFVIASWL 127
           DLMVDLIQ V++GVGEHLLPSTVP DVEYY+NQ+GTSQGTLLIRSAL  SPIDF+IASWL
Sbjct: 61  DLMVDLIQGVENGVGEHLLPSTVPPDVEYYENQSGTSQGTLLIRSALQSSPIDFMIASWL 120

Query: 128 HLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVLRPDYLT 187
           HL+QP GGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PR DIVLRPDYL 
Sbjct: 121 HLEQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIVLRPDYLV 180

Query: 188 TFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCEESESGRVEEIIRE 247
           T+YEET LEK+R++L A+ EVSPYFSSSL+FRKVVSSTGILVSVKCEES+S RVEEI+RE
Sbjct: 181 TYYEETGLEKHRQQLAALPEVSPYFSSSLYFRKVVSSTGILVSVKCEESKSERVEEIVRE 240

Query: 248 EIGPISKEVLRIWMELCSNGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKTMPLQFGEE 307
           EIGPISKEV+RIWMELC NGGREIE+  ERSL+EKRDLMIKKKAIEMDLSKTMPLQFGEE
Sbjct: 241 EIGPISKEVMRIWMELCMNGGREIEE-EERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEE 300

Query: 308 VAERVLRVIRSAFRTA 318
           VA RVL+VIRSAF+TA
Sbjct: 301 VANRVLQVIRSAFKTA 314

[Close]
BLAST of Cp4.1LG05g11430 vs. NCBI nr
Match: gi|449460580|ref|XP_004148023.1| (PREDICTED: red chlorophyll catabolite reductase-like [Cucumis sativus])

HSP 1 Score: 470.7 bits (1210), Expect = 2.0e-129
Identity = 247/324 (76.23%), Postives = 282/324 (87.04%), Query Frame = 1 

Query: 1   MALTTLTLVPRACYCLP--PLRFGGGRRRTRQVIKAELPSAA-MGSG---RPASKLMEFP 60
           M L  + L+  A   +P  PLRF   +R ++ V+KA   S+  M SG    P SKLMEFP
Sbjct: 1   MGLLAVNLISSASCFVPHSPLRFQA-KRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFP 60

Query: 61  HLTAAHRDLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSALPPSPID 120
           HLTA+HRDLMVDLI+ V++G+G+HLLPSTVP+DVEYY+NQ GTSQGTLLIRSALP SPID
Sbjct: 61  HLTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPID 120

Query: 121 FVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRVDIV 180
           F+IASWLHLKQP GGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PR DI+
Sbjct: 121 FMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDII 180

Query: 181 LRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCEESESGR 240
           LRPDYLTT+YE+T LEK R+RL A+ EVSPYFSSSL+FRKVVSSTGILV VKC+ESES R
Sbjct: 181 LRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKR 240

Query: 241 VEEIIREEIGPISKEVLRIWMELC-SNGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKT 300
           VEEII+EEIGPISKEV+RIWMELC +NGGRE+E+ +ERSL+EKRDLMIKKKAIEMDLSKT
Sbjct: 241 VEEIIQEEIGPISKEVMRIWMELCLNNGGRELEE-DERSLMEKRDLMIKKKAIEMDLSKT 300

Query: 301 MPLQFGEEVAERVLRVIRSAFRTA 318
           MPLQFGEEVA RVL+VIRSAF+TA
Sbjct: 301 MPLQFGEEVANRVLQVIRSAFKTA 322

[Close]
BLAST of Cp4.1LG05g11430 vs. NCBI nr
Match: gi|659116003|ref|XP_008457850.1| (PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo])

HSP 1 Score: 464.5 bits (1194), Expect = 1.4e-127
Identity = 239/326 (73.31%), Postives = 276/326 (84.66%), Query Frame = 1 

Query: 1   MALTTLTLVPRACYCLP-----PLRFGGGRRRTRQVIKAELPSAAM----GSGRPASKLM 60
           M L    L+  AC  +P     PLRF   +R +++V+KA L S+      G   P SKLM
Sbjct: 1   MGLLAANLISSACCFVPLPPPSPLRFQA-KRSSQRVLKAALTSSEKMDSGGQAAPVSKLM 60

Query: 61  EFPHLTAAHRDLMVDLIQAVDDGVGEHLLPSTVPSDVEYYQNQTGTSQGTLLIRSALPPS 120
           EFPHLTAAH DLM+ LIQ V++G+G+HLLPSTVP+DVEYY+NQ GTSQGTLLIR  +P S
Sbjct: 61  EFPHLTAAHTDLMLYLIQTVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRHGIPSS 120

Query: 121 PIDFVIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRV 180
           PIDF+IASWLHLKQP GGAF+ITNIAGY+K +NDIPHFQFELVQCSPTFLIFFLDL+PR 
Sbjct: 121 PIDFMIASWLHLKQPQGGAFDITNIAGYMKPSNDIPHFQFELVQCSPTFLIFFLDLLPRT 180

Query: 181 DIVLRPDYLTTFYEETELEKYRRRLDAVSEVSPYFSSSLFFRKVVSSTGILVSVKCEESE 240
           DI+L PDYLTT+YEET LEK R+RL A+ EVSPYFSSSL+FRKVVSSTGILV VKCEESE
Sbjct: 181 DIILHPDYLTTYYEETGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCEESE 240

Query: 241 SGRVEEIIREEIGPISKEVLRIWMELCSNGGREIEDGNERSLLEKRDLMIKKKAIEMDLS 300
           S RVEEI+REEIGPISKEV+RIWMELC +GGRE+E+ +ERSL+EKRDLMIK+KAIEMDLS
Sbjct: 241 SKRVEEIVREEIGPISKEVMRIWMELCLSGGRELEE-DERSLMEKRDLMIKRKAIEMDLS 300

Query: 301 KTMPLQFGEEVAERVLRVIRSAFRTA 318
           K+MPLQFGEEVA RVL+VIRSAF+TA
Sbjct: 301 KSMPLQFGEEVANRVLQVIRSAFKTA 324

[Close]
BLAST of Cp4.1LG05g11430 vs. NCBI nr
Match: gi|253787599|dbj|BAH84859.1| (putative red chlorophyll catabolite reductase, partial [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 1.6e-94
Identity = 178/210 (84.76%), Postives = 196/210 (93.33%), Query Frame = 1 

Query: 83  TVPSDVEYYQNQTGTSQGTLLIRSALPPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKT 142
           TVP DVEYY+NQ GTSQGTLLIRSALP SPIDF+IASWLHLKQP GGAFNITNIAGYLK 
Sbjct: 1   TVPPDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP 60

Query: 143 TNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVLRPDYLTTFYEETELEKYRRRLDAVSEV 202
           +NDIPHFQFELVQCSPTFLIFFLDL+PR DI+LRPDYLTT+YE+T LEK R+RL A+ EV
Sbjct: 61  SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV 120

Query: 203 SPYFSSSLFFRKVVSSTGILVSVKCEESESGRVEEIIREEIGPISKEVLRIWMELC-SNG 262
           SPYFSSSL+FRKVVSSTGILV VKC+ESES RVEEII+EEIGPISKEV+RIWMELC +NG
Sbjct: 121 SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG 180

Query: 263 GREIEDGNERSLLEKRDLMIKKKAIEMDLS 292
           GRE+E+ +ERSL+EKRDLMIKKKAIEMDLS
Sbjct: 181 GRELEE-DERSLMEKRDLMIKKKAIEMDLS 209

[Close]
BLAST of Cp4.1LG05g11430 vs. NCBI nr
Match: gi|566180698|ref|XP_002310112.2| (hypothetical protein POPTR_0007s11040g [Populus trichocarpa])

HSP 1 Score: 332.0 bits (850), Expect = 1.1e-87
Identity = 174/296 (58.78%), Postives = 214/296 (72.30%), Query Frame = 1 

Query: 26  RRTRQVIKA-ELPSAAMGSGRPASKLMEFPHLTAAHRDLMVDLIQAVDDGVGEHLLPST- 85
           R+ R  I+A     + M       +LMEFPHL A H+DLMV LI AVD  +  HLLPS+ 
Sbjct: 27  RKIRNSIRALSTTPSEMEQPMRGQRLMEFPHLLAPHKDLMVGLISAVDKRLHGHLLPSSA 86

Query: 86  -VPSDVEYYQNQTGTSQGTLLIRSALPPSPIDFVIASWLHLKQPHGGAFNITNIAGYLKT 145
            VP D EYYQNQ+G SQG+L I   +  S IDF++ SWLHL  P+GGA +ITNI GYLK+
Sbjct: 87  SVPPDAEYYQNQSGASQGSLCINRGVDSSHIDFILTSWLHLSLPNGGAMDITNIQGYLKS 146

Query: 146 TNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVLRPDYLTTFYEETELEKYRRRLDA-VSE 205
           + D PHFQFELVQCSPT+ IFFLDLIPR D+VL PDYL TFYE+++LE  R++LD  V E
Sbjct: 147 STDAPHFQFELVQCSPTYFIFFLDLIPRKDLVLHPDYLKTFYEDSQLEALRKQLDTQVLE 206

Query: 206 VSPYFSSSLFFRKVVSSTGILVSVKCEE-SESGRVEEIIREEIGPISKEVLRIWMELC-S 265
             PYFSSSL+FR VVS TGILVS+ CE+   + R EEIIR+ I PI+ EVL +WM+ C  
Sbjct: 207 AKPYFSSSLYFRNVVSPTGILVSITCEDGGTTERAEEIIRDNIDPIANEVLELWMDSCVC 266

Query: 266 NGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKTMPLQFGEEVAERVLRVIRSAFR 316
            GG  I + NER  LEKRD MIK +A+EMDLS +MP+QFG++VA+R+L VIR  FR
Sbjct: 267 KGGTAIIEENERDHLEKRDRMIKSRAVEMDLSSSMPIQFGQDVADRILGVIRGVFR 322

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g11430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RCCR_ARATH6.6e-5642.16Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=R... [more]
RCCR_HORVU1.1e-3938.61Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 ... [more]
BLAST of Cp4.1LG05g11430 vs. TrEMBL
Match NameE-valueIdentityDescription
Q1ELT6_CITLA1.5e-13480.38Red chlorophyll catabolite reductase (Fragment) OS=Citrullus lanatus GN=rccr PE=... [more]
A0A0A0LLX2_CUCSA1.4e-12976.23Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285290 PE=4 SV=1[more]
C6L812_CUCSA1.1e-9484.76Putative red chlorophyll catabolite reductase (Fragment) OS=Cucumis sativus GN=C... [more]
B9HH31_POPTR7.8e-8858.78Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11040g PE=4 SV=2[more]
V4SF05_9ROSI8.9e-8461.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026248mg PE=4 SV=1[more]
BLAST of Cp4.1LG05g11430 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37000.13.7e-5742.16 accelerated cell death 2 (ACD2)[more]
BLAST of Cp4.1LG05g11430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|106880172|emb|CAJ80768.1|2.1e-13480.38red chlorophyll catabolite reductase [Citrullus lanatus][more]
gi|449460580|ref|XP_004148023.1|2.0e-12976.23PREDICTED: red chlorophyll catabolite reductase-like [Cucumis sativus][more]
gi|659116003|ref|XP_008457850.1|1.4e-12773.31PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo][more]
gi|253787599|dbj|BAH84859.1|1.6e-9484.76putative red chlorophyll catabolite reductase, partial [Cucumis sativus][more]
gi|566180698|ref|XP_002310112.2|1.1e-8758.78hypothetical protein POPTR_0007s11040g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009439RCC_reductase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006725 cellular aromatic compound metabolic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:1901360 organic cyclic compound metabolic process
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044711 single-organism biosynthetic process
biological_process GO:0050789 regulation of biological process
biological_process GO:0044238 primary metabolic process
biological_process GO:0042440 pigment metabolic process
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0046483 heterocycle metabolic process
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0034641 cellular nitrogen compound metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0003674 molecular_function
molecular_function GO:0051743 red chlorophyll catabolite reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g11430.1Cp4.1LG05g11430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 59..311
score: 1.7
NoneNo IPR availablePANTHERPTHR34685FAMILY NOT NAMEDcoord: 25..317
score: 6.2E
NoneNo IPR availablePANTHERPTHR34685:SF2RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 25..317
score: 6.2E