CmoCh02G004570 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G004570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Localized to the inner membrane of the chloroplast
Location	Cmo_Chr02 : 2413545 .. 2421094 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATACCAGGTTAGTTGATCTTTCAAGGGCTCTCTTATGCAAGAACCCGCTTTCCCATCTGTTCATATTCCTCTCCTCAAAAGTATATACCAGTAATTATTTCACCTTGTTCTGTTTCTGGGTTATGCTGTTAGTTATTCACATCATATTTGAGCACTTTTTGAGTTTAAGATCAGAATTGCGGCCGTTTGTATATATAAGTAGAATGGAAACAGAAATAATATTTGCTTGTTAACAGTCGCGGGTGTTAGAGACCCATGTATTCACCTTAACACTACTCTGCCTCTTTGCTGCATTAGGATCATCCTTTAATAAGGTCTCCATCTTTCTCTACTAGATTTGACATGTTCTAAGCTTTCCTTCATATGCTTTGATCATATTAAGGACCAATCTTCTCAAGTTTACTGGGAAAATATCCCGATGGGTTCGTAAAGCTTCAAATTTAATACAATTCATGGTAAGGGTAGATCGTCTAGATCACCGACCGTAATCTCTCTATTCCCATGATTTAGAAGCTTATATTTGAATCATAAGCTTCATTCATATTTGAGTTTGAGGACAACCATTCTATTTATGCAAGAGTGTTTACCTTTTTAAAGAATCGTACATGGTCTAGTAAGGTTCGAAGAAACACTTCAAATCGTTAAGTTAGATGTTATTAAAGCCTATTAGTAAGACTTTTACGGTTTGTAAAGTTTATTAATAAGAAAGTTGTGCAAAACATTCTTCAAAGTTGAAGAAAAATTTAGAAACGACAAAGTTTCCTTAAACTTATGAAGTCTCGTTTCGGTAGTAGACCAGTTTGTTAACATCCCCCGAGCCGTTTTTTATTAACATAATGACACCGAGCCCTTGTTGCAGCTTGGGCTCCTCCTTTCAAAAACTAAAATCACAAGCGAGCAGTTCTAATCAGATTTATTTATAATATGAATACCTTTTGGATTATAATCTTTTCAAATCGTTAATTAATAAAATAAAATTGTTGTCAATAAAAATGAAAATTTCTCAATTTTGTAGAAATTTTTATAAAAATATCGAAAAATATTTTTTTAAAAAATAAAACAAGTATTGTAATTAATATATAAACATTTTTTAAAATTTGTTTTTATTCTTTTATGTTATAATAGAAACGCCAATTTTAAATTTTAAATTCTGTATTGAAAGAAAATCACTATAATATTAAATTTTCATTGATATTTTCACACGTCTATTAGGTTTAACATTGGCATCAGGCATTTAAAAAATATAAATTATTTATTTATTAATGTAAATAATTTTATGTTTTTTTTTTCTAGAAATTGCATAATATTTACATAAAATTCATCGACAATTTAACTCAGAAAAAATTGGAAGGAAAAGTCAAATATTATATAAATGGTAATTGAGGCGAACAATGAGGCGATTATCTCCAACACTCTCTCCTGTTCCTTCTTCTTCCTCTCTCTCTAGATCTCTACCCTTCTTCCAACCACATGGCTGCCTGCTTTTCTCCCTCGCTGTCCCTGTCTGGTAAATTTTTTCTTCTCTCTTTGTCATAGTAGTTCGGTGATTTGTTTCCGCATGCATATTCACATGATTGTGTGTTTGTGTTGAGTGATTGAGTAGATCGAAATTTTTTTCCTAGTAATTATCGCCTGTTAGGTTGCATTGAAAAGCTCTGGAAACGGATGGTTTTTATGAAGCAAAATATTTCGTATTCAATCTCTTTGGAAACTTTGTTACGCATGCCCCCCGGTGATGGCTTTTGCATTTAAATTAAAACGTTGAGTTCGATAACGGTTGCTGTGTAGACGTTTCGTAGTTTCGAGGTGGTTTGTTGAATGTTTGATTGTTGGTTTTTTATCGCTCGAGAAAATTATGGTCTTTTCGGATTTGTTGTGTGAATTTCTGGACGAAAATTGGAGGTGGTTATCTCGATTGGTTTATGAAATTCGATCGTTTCAAATTTTAGCTCTTTGCTTAGCTCGTTTCTGTTCACAGAGTAATCAGTTGTATTTGGGCTTAGTTCTTTTTATCGTTTTTTCCTTCTGTGGTTAGGGGGATTGATCAAGGCCTCAGATCTCTCCTCTAAGTCCATTTCCTTTGGGCATGCACCAAAACTCTCAGTTCAGAAGTGCTTCAAAACCAACCACAAGTTATCAGTACGTGCTGAGTACAAGTACGTTATGTTGCTTTATGCAATGAACGAAATTATTAACATCATTTTGTTTAAATGCTTTTCTCTTATTGAAGTCTCACGTCGGATATATTTTATCATGAATTATAACTGAGGTAGATATGAAAGGATTTGTTCTTATAATGTTGTACTTCTATTGTTACATGATTCTGAACTTGGTTAAGATATAGCTGACTTTTTGGAGCGATTTTATTTACTAAAAATTTAAGCTAGCAAAAGAATAGTATTATACAGTTGCAATACTAATCATGTATCCTTATCAGGAAAGGGGGTGCTGGGTGAGTATAGGATTGAGCGGGCAGGGAATATATAATATAGGAAAGGAAGGAAGATTCTGAAAACTTAAGTGAAAGAGAAAGTAGTATACTGAATTATCAAAAAAATCTAAATAAGTTTTATAGCAGAGATTTTTGTGGGTGGATTCATTGCTTGAGGATTTTTACTCTAATGCATGCATGGTAGTTTGTTATAAGTCATACCTATCCATAGTTCTAATGAGAATACAGTTTTCAAATTGAACTCTACTGCGTACCTTGAGGGATCCATCTCTAGTGAAGCATGCCTCATTTATTTCTGAGGCAAGAGCCACCTTTCTTTTCCATAGATACTCCAGCACAAGACCACCCATTTGCTTATAAAGAAATTATGTTGCAGTTCTTACTAAAAATAAATAAATAAATAAAGAAATAAAGAAAGAAAAGAAATTATGTTGCAGTTGAAAATATAAACTCCTTCCTCCTTTCCCTTACCAGCGGCCCAAATTAGATGGTTGAAAAAGAGAAGTAAATTGGAAAGATTTTCTTTTTTATCCCCATCTACAAATCCTTTTTTTCAAACATGCTCTATTTTATTATGTTTTAGGGAGAAAACTGTACTTTCCATTTAGAGATAGAAGGAGCAATATGGAAAAAACACAAGGCACCTTGAGATGTTAAAGGAGATTTCCAGAATCTACTCTGCATTTGAGATATTCCACTACATATATAGATGTACTTTATGTTTTCAATTGTCTAATACACATAGAAATAATGGTTCATTTTATTCATTTTTTGCTCCTTGTAGTAGTTCTTCCCTCCGGATACTTGAAAGTTCAAGATTTGGATGTTGTTTGACCTGGTTGCTCTTGCTACTAGTTTCTTAGTGTTTCACATGAATAGCAAAACTCTACTGATGAGAATAGCATCAAATTAAGAACCTAACAAGACATCCTCAAGCCATAAAGAAAATAATTTCATGAAATATCTCGATGTATATTGCGAGTTAACAAAGAGAGAAACGAGAATGGTAGTCCACTCCCAATATTTCAGGATTAACTGGAATGCCTATGGGTTAGCTTATATATATTGACTTTGACATCTCTCTTGGATTGGTATTCTGGGGAAAAAATGGTTAACACGTCCACTTTACTTTGTCATTCTAACAATACCAAACTTCTTTGTAAATCATTATTGTTTCTTTCCTATAGTTCTACTAGATTTTTGGACAGACAAATTCCATTCTTAAAATCTTAATTTGGTTACTTAGATGAAGATGCGTTTACTGACCCATTTGAAATATTATAAAAGCAGCACATTTCTATTTACTCCAGGAATGAATTTCCAATGGTTTCTTTATTTTTTTTCCATAAGGACAGTTGGACTAATAGCTACAAGTTTGTTTTTTTGTTACAGTGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTTGCTGGGTTTCTTCTTGGGGGTGCTGTATTTGGAACATTAGCTTATGTTTTCGCACCGCAGGTGAAGTCAATGTTTTGTAGTTTTGTTCTAATATCTTACATATCATCTCTGGCAAATAAGATTTTAACATTGAACATTTGGATTTCATATCACCATTGTTGTTCTGATTCAGCTAGGGTATATTTTAAATATTCACATAAACATGCATCTGTTTAGATGATTTCATGAAGTTAAAAAGAAAATGGATGAGGGGACAAATGCACTTATACTCTATAGTTCTTCTAATCTTTATATGCAAATGCAGAAGGCTTATTTTTTATTTGCCCCACATATGTCATCGTTACATACAAATTTCAGAATGTGTCAAGTGGTTTTAATAGTTTGGAAATTCTATTTATTGCCTTTCTGCTTGTATGCACGTAATGCAGATCAGGAGATCTCTTCTAAATGAAAATGAGTATGGTTTTAAGAGGGCAAAGCGTCCAATCTACTACGATGAAGGTTTAGAGGTAATTATAATGATATACTCTTATTGTAGATTATTTTTTTTTTAGTACAATTTGGTTTCCTTTATACAAGTTAAGTTATGGCTTGGAAATCCAATCCTTGAACTCTGATAGTTCTGTCTGTTCTATCTTTAGATTTCCAAAAATTTCAATTAGATCTCTACTTAACTTAGTTCATGGTCTGTAAAAGAGAGTATGACATAGTGTCATTTTATTATGTTCAGTGGCTTGCTTTTTGTTTCTTGATTTCAAATCAGCCTAGGTTTGTTGAATAGGAATAAGCATATCACAGTATCATTTAGATACAGTAGAGACTATAGACTTACCATTCAAAATTTAGGGATATAAAAAATTGAGAAGTGTATCGCCAAGGTGTTGGCCAACAGATTGAGAAGGGTGCTTCCTTTGGCAATAGCATATTCTCAGGATGCTTTTATTGCTGGTACACAAATTTTAGGTCTGGCCCTTATTGCGAATGAGATTATTAACTACAGATTTCACAATTAGGAAGGGGTCATCTTCAAGATTGACTTTGAAGAGGCATATAGGTTAGAATTTCTTGTATGAAGTCATAGCCAAGAAGGTTTCTAGGTATAAATAGAAATCTTGGATTTGGAGTTGTGTTAGATCGGTTAAGTACTCAATCCTTACGAATGGGAGACTGAAGGGTAGGATTTGTGCTTCAAGAGGGTTTCAGCAGGAATCCTCTTTTGCCCTTTCATTTTCTCGTGGTGGATGTTTTGAGTAGGATCTTTTTGCGAGGGGTTGAGTATAATGCTATCGATGGTTTTAACGTCGGGAAGGATAAGTTGCCCCTCTCTCATCTCTAGTATGCTGATGATACTACCTTTTTTTGCTCAGGTAATGAAGAGTCGTTCTTCAATCTGAATAAGTTTTTAGCTTTCTTTGAACCCATTTATGGTTGAAGATTAATAGAGGTAAGTGTCAATGGTTGGGTTTGAATTGTGAGCCGTGGAAGATGAGTAGGTGGGCTGCCTTGGTTGGATGTGAAGTTGGTTCGTTTCCTTCCTCTTACCTTCGTCCCCCACTTGGGCATAATCCTAGACCTATCCGGTTCTGTGACCTTGTTGTGGGTAAGGTTCATAGGAGGCTTTCATCTTCGAATATGAGTTCCTTCTTGGAAGGTACTAGACTAACTCTAATTCAATTTGTCTCAAGGAAATTCCAATTTATTTCTTTTCTCTTTTTAGGGTCCTTGTGCATGGGACTGAGGGTCTCGAGAAGCATATAAGGGATTTCCTTTTGAGTGGACCTTGTATGGAGGTTGAGGCACATATAGAAACCCCTGGAAAGACATTGCTGAGGAGTACACCTTTTTCTGCTTTGTTCATTGTTCTGTGGGGATGGAAGAGAGTTTTTGGGTCGGAAGATAAGTGGTTCGGAGATAGATCCCACTGCTTTGTGTTTCCTCATCTTTATCATTTATTTATGATGAATAATCATTTGATAGCCGATTTTCTATCACATCCTAGGTATTTTCCCTCGCCTTTGTTGGGCTTCCAGCATCCTTTGTCCAATATGGGGGAAACGTTGGACATTGTCGACCTCCTTTCTTTGTTGGGGGAATTCTGTTGTTTTTGAGGAGGGATGCTTGTTGTTGGAGCCCTAGCCCGACCGGAGGTTTTTCGTGTAGGTCCTTTTTTTTTTGCATGGTTAATCCCTCTTCCTCCTCTCCTTTGGGGATTTTGTTTTTGCGTCATTGTGGAAGGTGAAAATCTCAAAGAAGGTTAAGTATTTTGCTTGGTATGTTATTCACGGTAGAGTTAATACCTTAGATAGGGTGGTGAGGAAGTTTCCTACCTTGGTGGGACATTCCTTATAAGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAAGAGACATTTTCATTGATGAGTGAAATTTACAAGAGGGATGTATAATCCATGATGTTTACAAAAGACCTTCCCAATTTGCAACGAGGGAGGTATAACTATAGGACAAAGTAAGACCTATAGTTATTTGACGAGTGAAATTGTACTTTGTTTGATTAGAGGCCTTTCATGTAGGTTGCCTCCTTTTGTGGGCTCTCTTTTTGTATGCTCTTGTATTCTTTCATTTTTTCTTAATAAAAGCTCGGTTTCTTATTAAAAAGATAAGGAACATAACTGATTTTGGAACTTATCAATGTTTAATATCTTAACAAACCCTAATTTTTCTGAGAAGCAGAAAACTAGAGAGACGTTGAATGCAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGAAAGAACACTCCAGCTGTGCCAGTTGAAGCTGATCCTGAGGTTGAAGCTACCTTTTAAATTCTGCTTAAACATGGACTGCTCAAGGTTTGAAGTTTGTACATCTTAGACACCATTTCATCTCATGTGACAATTTGCCTCATTTCAAAGTTTTTTGGATTTGATCAAGATGAGAATTGGATATTGCAGCTTCATTGTTGGAATGATCTTTAAGGTTATTACCACTTTTAGAACTTTTTAAATCACCACTGAATTCCAATGTAGTTTTTGTTGTCCATATTAATATAAGAACATAGTCTAAATAGCCAAATTTTGGCATACA

mRNA sequence

ATGTATACCAGGTTAGTTGATCTTTCAAGGGCTCTCTTATGCAAGAACCCGCTTTCCCATCTGTTCATATTCCTCTCCTCAAAAGTATATACCAGTAATTATTTCACCTTGTTCTGTTTCTGGGTTATGCTGTTAGTTATTCACATCATATTTGAGCACTTTTTGAGTTTAAGATCAGAATTGCGGCCGTTTGTATATATAAATCTCTACCCTTCTTCCAACCACATGGCTGCCTGCTTTTCTCCCTCGCTGTCCCTGTCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCTAAGTCCATTTCCTTTGGGCATGCACCAAAACTCTCAGTTCAGAAGTGCTTCAAAACCAACCACAAGTTATCAGTACGTGCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTTGCTGGGTTTCTTCTTGGGGGTGCTGTATTTGGAACATTAGCTTATGTTTTCGCACCGCAGATCAGGAGATCTCTTCTAAATGAAAATGAGTATGGTTTTAAGAGGGCAAAGCGTCCAATCTACTACGATGAAGGTTTAGAGAAAACTAGAGAGACGTTGAATGCAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGAAAGAACACTCCAGCTGTGCCAGTTGAAGCTGATCCTGAGGTTGAAGCTACCTTTTAAATTCTGCTTAAACATGGACTGCTCAAGGTTTGAAGTTTGTACATCTTAGACACCATTTCATCTCATGTGACAATTTGCCTCATTTCAAAGTTTTTTGGATTTGATCAAGATGAGAATTGGATATTGCAGCTTCATTGTTGGAATGATCTTTAAGGTTATTACCACTTTTAGAACTTTTTAAATCACCACTGAATTCCAATGTAGTTTTTGTTGTCCATATTAATATAAGAACATAGTCTAAATAGCCAAATTTTGGCATACA

Coding sequence (CDS)

ATGTATACCAGGTTAGTTGATCTTTCAAGGGCTCTCTTATGCAAGAACCCGCTTTCCCATCTGTTCATATTCCTCTCCTCAAAAGTATATACCAGTAATTATTTCACCTTGTTCTGTTTCTGGGTTATGCTGTTAGTTATTCACATCATATTTGAGCACTTTTTGAGTTTAAGATCAGAATTGCGGCCGTTTGTATATATAAATCTCTACCCTTCTTCCAACCACATGGCTGCCTGCTTTTCTCCCTCGCTGTCCCTGTCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCTAAGTCCATTTCCTTTGGGCATGCACCAAAACTCTCAGTTCAGAAGTGCTTCAAAACCAACCACAAGTTATCAGTACGTGCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTTGCTGGGTTTCTTCTTGGGGGTGCTGTATTTGGAACATTAGCTTATGTTTTCGCACCGCAGATCAGGAGATCTCTTCTAAATGAAAATGAGTATGGTTTTAAGAGGGCAAAGCGTCCAATCTACTACGATGAAGGTTTAGAGAAAACTAGAGAGACGTTGAATGCAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGAAAGAACACTCCAGCTGTGCCAGTTGAAGCTGATCCTGAGGTTGAAGCTACCTTTTAA

Homology

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BLAST of CmoCh02G004570 vs. TrEMBL
Match: A0A0A0LNE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G445770 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 122/153 (79.74%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSG 135
           MAAC +PSLS+SGGLIKASDLSSKSISFG  PKL+++ KC KTNHKLSV AEYNDGGRSG
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60

Query: 136 --GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDE---GLEKTR 195
             GGDFVAGF LGGAVFGTLA+VFAPQ+RR LLNENE+GF+RAKRP+YYDE   GLE TR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 196 ETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVE 223
           ETLNAKI QL SAIDNVSSRL+GGK  P +PVE
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 153

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BLAST of CmoCh02G004570 vs. TrEMBL
Match: A0A0A0LNY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G233000 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.2e-57
Identity = 121/153 (79.08%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSG 135
           MAACF+PSLS+SGGLIK SDLSSKSISFG   KL+++ KC KTNHKLSVRA+Y+DGGRSG
Sbjct: 1   MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSG 60

Query: 136 --GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDE---GLEKTR 195
             GGDFVAGF LGGAVFGTL+YVFAPQIRR LLNENE+GF+RAKRP+YYDE   GLE TR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 196 ETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVE 223
           ETLNAKI QL SAIDNVSSRL+GGK  P +PVE
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 153

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BLAST of CmoCh02G004570 vs. TrEMBL
Match: A0A061EYQ8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_025556 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53
Identity = 116/158 (73.42%), Postives = 134/158 (84.81%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGL-IKASDL-SSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGR 135
           MA+CF+P +S+SGG  +KA ++  +KS +FG  P L+V+ K   +N + SV AEY DG R
Sbjct: 1   MASCFAP-VSISGGSHLKAREVWFTKSSTFGKTPSLAVRRKPMPSNRQFSVCAEYRDGSR 60

Query: 136 SGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETL 195
            GGGDFVAGFLLGGAVFGTLAY+FAPQIRRSLLNE+EYGF+RAKRPIYYDEGLEKTR+TL
Sbjct: 61  GGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTL 120

Query: 196 NAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT 231
           NAKI QLNSAIDNVSSRLRGG N+P VPVE DPEVEAT
Sbjct: 121 NAKISQLNSAIDNVSSRLRGGNNSPTVPVETDPEVEAT 157

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BLAST of CmoCh02G004570 vs. TrEMBL
Match: A0A067L4W1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02565 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 118/160 (73.75%), Postives = 132/160 (82.50%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGL-IKASDL-SSKSISFGHAPKLSVQKCFKT---NHKLSVRAEYNDG 135
           MA  F+P +S+SGG  +K  +L SSKS S G  PKL+  +       N KLSVRAEY+DG
Sbjct: 1   MATSFAP-VSISGGSHLKTHELCSSKSYSLGKIPKLAALRKSNQAGMNRKLSVRAEYHDG 60

Query: 136 GRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRE 195
            R GGGDFVAGFLLGGA+FGTLAYVFAPQIR+SLLNE+EYGF+RAKRPIYYDEGLEKTR+
Sbjct: 61  SRGGGGDFVAGFLLGGAIFGTLAYVFAPQIRKSLLNEDEYGFRRAKRPIYYDEGLEKTRQ 120

Query: 196 TLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT 231
           TLNAKI QLNSAIDNVSSRLRGG N+P VPVE DPEVEAT
Sbjct: 121 TLNAKISQLNSAIDNVSSRLRGGNNSPTVPVETDPEVEAT 159

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BLAST of CmoCh02G004570 vs. TrEMBL
Match: B9I736_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s07570g PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52
Identity = 115/161 (71.43%), Postives = 133/161 (82.61%), Query Frame = 1


Query: 76  MAACFSPSLSLSGG--LIKASDL-SSKSISFGHAPKLSVQK---CFKTNHKLSVRAEYND 135
           MA  F+P    SGG   +K  +L S+KSISF  AP+L++ +      ++ K +VRAEYND
Sbjct: 1   MATSFAPVSVSSGGGSQLKPRELWSTKSISFSKAPRLAIGRKSNLVGSSPKFAVRAEYND 60

Query: 136 GGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTR 195
           G R GGGDFVAGF+LGGAVFGTLAY+FAPQIRRSLLNE+EYGF+RAKRPIYYDEGLEKTR
Sbjct: 61  GSRGGGGDFVAGFVLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTR 120

Query: 196 ETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT 231
           +TLNAKI QLNSAID VSSRLRGGKN+P VP+EADPEVEAT
Sbjct: 121 QTLNAKISQLNSAIDKVSSRLRGGKNSPPVPLEADPEVEAT 161

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BLAST of CmoCh02G004570 vs. TAIR10
Match: AT5G16660.1 (AT5G16660.1 unknown protein)

HSP 1 Score: 171.0 bits (432), Expect = 8.5e-43
Identity = 105/167 (62.87%), Postives = 122/167 (73.05%), Query Frame = 1


Query: 76  MAACFSPS-LSLSG----GLIKASDLSS--KSISFGHAPKLSVQKCFKTNHKLSVRAEYN 135
           MA+C + + LSLSG      +KA+ LS+  K  S      L++ K      K SV A Y 
Sbjct: 1   MASCIATAPLSLSGVSQSHYVKANGLSTTTKLSSICKTSDLTIHKKSNRTRKFSVSAGYR 60

Query: 136 DGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNE-NEYGFKRAKRPIYYDEGLE 195
           DG RSG  GDF+AGFLLGGAVFG +AY+FAPQIRRS+LNE +EYGF++ K+P YYDEGLE
Sbjct: 61  DGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDEGLE 120

Query: 196 KTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT 231
           KTRETLN KIGQLNSAIDNVSSRLRG  KNT +  VPVE DPEVEAT
Sbjct: 121 KTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVETDPEVEAT 167

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BLAST of CmoCh02G004570 vs. TAIR10
Match: AT3G02900.1 (AT3G02900.1 unknown protein)

HSP 1 Score: 161.0 bits (406), Expect = 8.8e-40
Identity = 87/130 (66.92%), Postives = 100/130 (76.92%), Query Frame = 1


Query: 109 LSVQKCFKTNHKLSVRAEYNDGGRSGGG-DFVAGFLLGGAVFGTLAYVFAPQIRRSLLNE 168
           L+VQ     +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAY+FAPQIRRS+L+E
Sbjct: 32  LTVQTKSNRSHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSE 91

Query: 169 NEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGG-----KNT--PAVP 228
           NEYGFK+ ++P+YYDEGLE+ RE LN KIGQLNSAID VSSRL+GG     KNT  P+VP
Sbjct: 92  NEYGFKKPEQPMYYDEGLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSVP 151

Query: 229 VEADPEVEAT 231
           VE D E EAT
Sbjct: 152 VETDAEAEAT 161

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BLAST of CmoCh02G004570 vs. TAIR10
Match: AT1G42960.1 (AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.)

HSP 1 Score: 85.1 bits (209), Expect = 6.1e-17
Identity = 66/169 (39.05%), Postives = 91/169 (53.85%), Query Frame = 1


Query: 76  MAACFSPSLSL---------SGGLIKASDLSSKSISFG--HAPKLSVQKCFKTNHKLSVR 135
           MA+  S SLSL         S G     +    S+SFG  H+ KL +    +T   L+++
Sbjct: 1   MASLSSTSLSLPKNSHQLHPSSGFSLNPNARCVSVSFGLNHSNKLHISAP-RTKRILTIQ 60

Query: 136 AEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDE 195
           + Y D   SG  G FV GF+LGG + G L  V+APQI +++   +     R      YDE
Sbjct: 61  SAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMRKLPKFIYDE 120

Query: 196 --GLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT 231
              LEKTR+ L  KI QLNSAID+VSS+L+  ++TP     +  E+EAT
Sbjct: 121 EKALEKTRKVLAEKIAQLNSAIDDVSSQLK-SEDTPNGAALSTDEIEAT 167

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BLAST of CmoCh02G004570 vs. NCBI nr
Match: gi|659118596|ref|XP_008459202.1| (PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 2.5e-68
Identity = 135/157 (85.99%), Postives = 150/157 (95.54%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSG 135
           MAACF+PSLS+SGGLIKASDLSSKS+SFG  PKL+++ KC KTNHKLSVRAEYNDGGRSG
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG 60

Query: 136 GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNA 195
           GGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+E+GF+RAKRP+YYDEGLEKTR+TLNA
Sbjct: 61  GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNA 120

Query: 196 KIGQLNSAIDNVSSRLRGGKNTPAVPV-EADPEVEAT 231
           KI QLNSAIDNVSSRLRGG NTPAVPV EA+PE+EAT
Sbjct: 121 KISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEAT 157

[Close]

BLAST of CmoCh02G004570 vs. NCBI nr
Match: gi|778673938|ref|XP_011650090.1| (PREDICTED: uncharacterized protein LOC101222662 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 3.3e-57
Identity = 122/153 (79.74%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSG 135
           MAAC +PSLS+SGGLIKASDLSSKSISFG  PKL+++ KC KTNHKLSV AEYNDGGRSG
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60

Query: 136 --GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDE---GLEKTR 195
             GGDFVAGF LGGAVFGTLA+VFAPQ+RR LLNENE+GF+RAKRP+YYDE   GLE TR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 196 ETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVE 223
           ETLNAKI QL SAIDNVSSRL+GGK  P +PVE
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 153

[Close]

BLAST of CmoCh02G004570 vs. NCBI nr
Match: gi|778669111|ref|XP_004145361.2| (PREDICTED: uncharacterized protein LOC101208760 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 7.4e-57
Identity = 121/153 (79.08%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSG 135
           MAACF+PSLS+SGGLIK SDLSSKSISFG   KL+++ KC KTNHKLSVRA+Y+DGGRSG
Sbjct: 1   MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSG 60

Query: 136 --GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDE---GLEKTR 195
             GGDFVAGF LGGAVFGTL+YVFAPQIRR LLNENE+GF+RAKRP+YYDE   GLE TR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 196 ETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVE 223
           ETLNAKI QL SAIDNVSSRL+GGK  P +PVE
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 153

[Close]

BLAST of CmoCh02G004570 vs. NCBI nr
Match: gi|568862250|ref|XP_006484598.1| (PREDICTED: uncharacterized protein LOC102628651 isoform X2 [Citrus sinensis])

HSP 1 Score: 219.2 bits (557), Expect = 7.7e-54
Identity = 116/160 (72.50%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 76  MAACFSPSLSLSGGL-IKASDLSS-KSISFGHAPKLSVQKC---FKTNHKLSVRAEYNDG 135
           MA C +P +S+SGG  +KA +LSS KS +FG  PKL VQ+     +TNHK S+RAEY +G
Sbjct: 1   MAYCLAP-VSISGGSHLKARELSSAKSATFGKTPKLIVQRKSNQLETNHKFSIRAEYGEG 60

Query: 136 GRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRE 195
            + GGGDF+AGFL+GGAVFGTLAYVFAPQIRRSLLNE+EYGF+RAKRPIYYDEGLE+TR+
Sbjct: 61  SQRGGGDFIAGFLVGGAVFGTLAYVFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLERTRQ 120

Query: 196 TLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT 231
           TLNAKI QLN+AIDNVSSRLRGG + P VPVE DPEVEAT
Sbjct: 121 TLNAKISQLNNAIDNVSSRLRGGNSAPKVPVEIDPEVEAT 159

[Close]

BLAST of CmoCh02G004570 vs. NCBI nr
Match: gi|702251695|ref|XP_010063491.1| (PREDICTED: uncharacterized protein LOC104450582 [Eucalyptus grandis])

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53
Identity = 118/162 (72.84%), Postives = 132/162 (81.48%), Query Frame = 1


Query: 76  MAACFSP-SLSLSGGLIKASDLSS-KSISFGHAPKLSVQKCFKTNH-----KLSVRAEYN 135
           MA CFSP S+S  G  +KA DL   KS S    P+L++QK  K+N      ++SVRAEY+
Sbjct: 1   MATCFSPLSISPGGSHLKAHDLGFLKSTSLRTGPRLNIQK--KSNEIDDKRRISVRAEYH 60

Query: 136 DGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKT 195
           DGGR GG DFVAGFLLGGA+FGTLAYVFAPQIRRSLLNE+EYGF+RAKRPIYYDEGLEKT
Sbjct: 61  DGGRGGGSDFVAGFLLGGAIFGTLAYVFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKT 120

Query: 196 RETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT 231
           R+TLNAKI QLNSAIDNVSSRLRGG N P VP+E DPEVEAT
Sbjct: 121 RQTLNAKISQLNSAIDNVSSRLRGGNNAPNVPIETDPEVEAT 160

The following BLAST results are available for this feature:

BLAST of CmoCh02G004570 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh02G004570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNE4_CUCSA	2.3e-57	79.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G445770 PE=4 SV=1	[more]
A0A0A0LNY8_CUCSA	5.2e-57	79.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G233000 PE=4 SV=1	[more]
A0A061EYQ8_THECC	1.6e-53	73.42	Uncharacterized protein OS=Theobroma cacao GN=TCM_025556 PE=4 SV=1	[more]
A0A067L4W1_JATCU	2.7e-53	73.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02565 PE=4 SV=1	[more]
B9I736_POPTR	1.3e-52	71.43	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s07570g PE=4 SV=1	[more]

BLAST of CmoCh02G004570 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16660.1	8.5e-43	62.87	unknown protein	[more]
AT3G02900.1	8.8e-40	66.92	unknown protein	[more]
AT1G42960.1	6.1e-17	39.05	expressed protein localized to the inner membrane of the chloroplast...	[more]

BLAST of CmoCh02G004570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118596\|ref\|XP_008459202.1\|	2.5e-68	85.99	PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo]	[more]
gi\|778673938\|ref\|XP_011650090.1\|	3.3e-57	79.74	PREDICTED: uncharacterized protein LOC101222662 [Cucumis sativus]	[more]
gi\|778669111\|ref\|XP_004145361.2\|	7.4e-57	79.08	PREDICTED: uncharacterized protein LOC101208760 [Cucumis sativus]	[more]
gi\|568862250\|ref\|XP_006484598.1\|	7.7e-54	72.50	PREDICTED: uncharacterized protein LOC102628651 isoform X2 [Citrus sinensis]	[more]
gi\|702251695\|ref\|XP_010063491.1\|	1.3e-53	72.84	PREDICTED: uncharacterized protein LOC104450582 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G004570.1	CmoCh02G004570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34048	FAMILY NOT NAMED	coord: 76..231 score: 4.6
None	No IPR available	PANTHER	PTHR34048:SF3	SUBFAMILY NOT NAMED	coord: 76..231 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G004570	CmaCh02G004480	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G004570	Cla010245	Watermelon (97103) v1	cmowmB538
CmoCh02G004570	Csa2G445770	Cucumber (Chinese Long) v2	cmocuB579
CmoCh02G004570	Csa2G233000	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G004570	MELO3C021897	Melon (DHL92) v3.5.1	cmomeB524
CmoCh02G004570	ClCG09G017260	Watermelon (Charleston Gray)	cmowcgB507
CmoCh02G004570	CSPI02G27970	Wild cucumber (PI 183967)	cmocpiB584
CmoCh02G004570	CSPI02G11540	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G004570	Lsi10G002870	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G004570	Cp4.1LG05g12150	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G004570	Cp4.1LG16g02000	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G004570	MELO3C021897.2	Melon (DHL92) v3.6.1	cmomedB604
CmoCh02G004570	CsaV3_2G014040	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G004570	CsaV3_2G036670	Cucumber (Chinese Long) v3	cmocucB0689
CmoCh02G004570	Cla97C09G178780	Watermelon (97103) v2	cmowmbB637
CmoCh02G004570	Bhi10G001745	Wax gourd	cmowgoB0752
CmoCh02G004570	Carg23610	Silver-seed gourd	carcmoB1074
CmoCh02G004570	Carg24053	Silver-seed gourd	carcmoB1415

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh02G004570	CmoCh20G009060	Cucurbita moschata (Rifu)	cmocmoB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G004570	Cucurbita maxima (Rimu)	cmacmoB554