Carg23610 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23610
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Low-density receptor-like protein
Location	Cucurbita_argyrosperma_scaffold_182 : 88898 .. 92854 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCTGCTTTGCTCCGTCGCTCTCTGTATCTGGTAAATCTTTTCTTTTCTCTCTTAGATTTGCTGTTCAAGGATTTCATTTTCCTATCTATGCATATTCACTTGATTCTGCGTTTGTTTCGAGTGATCGAGTAGGTCGAACTTTTTCCTTAGTAATTATCGCCTGTAAGGTTGCTTTGAAAAGCTCTGGAAACGGATGAATTTAATAAGACAAAAGCAATTTCGTATTCAATCTGTGGAACTTTATTAGGACGTATTTTGCATTTCAGTTCCATGTAGATTGCTATTATAGACGTTTTCTTAATCTCGAGGAGGAGGTTTGTTGAATTCTAGGTCTCGGTTGGCTTTTGTAACTCGATCGTTTAAGATTTTTGTTCTGTTTATCTTTGCTTAGCTCGTTTCTTTTCACAAGGTAATCCATCTGTTCATCGCTCTTAATTCTTTTTTTTTTTTTTCGTTTTTTTCGTACTTTCCTTCTGTGTTTAGGGGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGTCAAGCACCAAAACTCGCCATCCAGAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAAGTACGTGATGTAGTGTTATTCAAAGAACAAAGCTTATTAGCCTTAGTTTTTTAAATTTTGTTATTATTAAAGTCACGTAGGCTATATTTCAGCATGAAATGAAAACTTAGATGGATACGAGGGATTTTTCTTTTTAGCGACGGGCTTCTAAAGTTGCATGAATCTAAAATTTCAGACGTAATTGCCTTTTTGTTTGATTTTAGTTACTATAAATTCAAGTTAGTGGAGAGCGGTTGTAATACAAATCAAGTATGCTTACCAGAAAAGGAGGTGTTGGTGAGAGTAGGGATGAGCAGGCAGGAGATAGTATTAAATAAGAAAGAATGTAAATTTCGAAGATATGGTTAAAAGAAAAGTAGTGTATTCAGGTCCTAGAACTCAAGGACACCGTTGTACAACTTATAGAACAGATCCTGTTCAAATAACGTCGTAGTGTATTCAATTCTCAAAATCTAATTAGTATTTATAGCAAAGTTTTGTTTGGGCACAAGATTCCGGGGGACGAGGGCTTTGTAATGCACTCCTAGTAGATTCTTATCAATTTGTTTAGTGAGAATACAATTCCAATTGAATTCTACTGTATGACCTGAGGGATCCATCCCTAGTGAAGTATTGATTTATGAGGCAAAAACCATAGTTCTTTCCTTAGATTCTCCAGCTCAAGACCACCAATTCTTTTAATTTAAAGAAACTATATTGCGGTTGAAATGATGAATTCTATCCTCCTTTTGCCTACCAGAAGCCCAATAAAATTCCTTAAATTTCACCAAATGTGAACTACCCTTTCATGGGTTTTGGAAAGTGTAAATTGGAGTAAAATTCCTTTTTCTCCCTATTTACTAGCATTTTCCTTCGAGCATGCACGGCTTTATTTTGTTTAAGGGGGGAAACTGTACTTTATACTTAGAGATGGAAAGAACAGTAAGGAGAGAAGACAAGGCATCCTTCCTTGAGATGTTAGAAGGAGATTACCTGAAACTACTCCCAATTTAAAATATTTCATCTATTTATATGTATGTTAGGTTTTCAATTCTACAAATGAGTTTTAGTAATAATAAATTGTCTACTACACATAAAAATGATAGTTTATTTTATACATTTGTTTCTCTTGTAGTAGCTCTTTCCTCTGGGTACTTGAAACTTTATGATTTGGATGTTGTCTTGCCTGGTTTCCTTAGCTTCTAGTCCTTACTGTTCAATATGAATAGCAAAACTCTATTGATGAGAATTTCAGCAAGACAAGAACCTAATAAGACATCCTCAAGGCAAAGAAAAGAATTGCAAGAAAGAACTCAATGTATAGTGTGAATTATAATGAAAGGAGAAATGAGAATAATCGTCAAACCCAAAAAATTCAGGATCAAATGGTATGTCAATAGGTTAGGCTTTATGTATATTGACTTTGACGACAACTTTGTTGGATTGATATTCTAGCGCCAAAACATTAAAATCTTGATTTTACATTGTCATTTTAACGATATCAAAGTTCTTTGTAAATTCTCATGTTTCTCTCCTACGGTTCTAGATTATAATAGAAAGATAAAGTTCAGCGTAGCCTTAGATGATGATGCATTGTATGCCCCGTTTATAAGGTTTTATAAGCAAGTTTTAAAAGCTGCCCAATTGTATTTACTCCAGGAGTTTATTTCTTGTGAGGAAGTCTTCCTTTATTTTCTTCCTGGATGAAAGTTGGACTAATAATTACGAGTTTGATTTTTATTACAGTGATGGTGGTAGAAATGGAGGTGGGGAGTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACTTTAGCTTACATTTTTGCTCCGCAGGTGATTGAATGTTTTGCTCTCTCTTGAAATAAAGATTTTAATGTAATCATTTGGATTTGATATCACCATTGATGATCTGATTCAGTTTAATACCTCCTTGTGATATGCAAATTCAGAAAACTGATTATTTCTTTGCCCCACATATGTTTCAATGTAGCGTTCAGTTACTCTCAACTTTTATAGGAAAATTATGCCATCCTCCTTCCGCAATATTCTTGACTATTTTCTTAAATCTTGTTGAGTGAGTCATATGGTTTCTCCTAGGTTCGAATATCTGTTTACTGCCTCTCTGATTGTATGCACGTAATACAGATCAGGAGATCTATACTAAATGAAGACGAGTATGGTTTTAGGAGGGCTAGACGTCCAATCTACTATGACGACGGTCTAGAGGTAACTACATTGACTTGTATCCTTTTTGTAGATTATTTATTTAATTTTTTTATGAAATTTAGTTTCCTTTAACTCTGATAGGTGTGTTTATTTCGTATCTGAATTTCCAAAAAAATTAGTTACATCTGCACATCGTTTAGTTAATGATCTGTAAACGAGCAGGATGGAGTGCTATTTATTTTCTTCAATGGTTTGCTTTTCTTTTAAATCATCTCATGTTCGTCAAATAGGAATAAGCACCACTGAGTAAACTGCACTTTATATGCACAATTCAAAATTAAGGTACATAATTGATTTCGTAATCGGTTAAATCCCAAAGTAATCGCCGGTCAGCCATACGGTGGTGAACTCGTTCCTGGGCCTTGTACACACCGCCCGTCACACTATCGAAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCAAAGGCTGGGCTAGTGACTAGAGTGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACCTCTTTTTCAAGGAGAGCTAATGCTTGTTGGGTATTTTGGTTTGACACTGCACATAATTGACTTTGTAATCGGTTAAATCCCAATTACAAGTTTAGTTCTTAATTTTGAGATTTACGTGTATTTGAGCCTTAAACTTTCAAAAGATTTGTCAGAGATTTACTAGACGTAGAGTTGAAAGCTTCGAGATTTATTAGATATAGAGTTCGAAGCAAATTAGCTAGTTGCAAACTAGGTCCAACTTCTTTATTAGATGCTTAATATCTTAATAAAACATGATTTTCTGAAATGCAGAAAACCAGACAGACGTTGAATGAAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAAGACTCCATCTGTGCCAGTTGAAGCGGATCCGGAGATAGAAGCTACCATGTAAATACAGTTTCTAGTTGCACAGGTTTGAAGTTTCTACTTCTTAGATACCATATATCCATGTGACAATATGCCACAATTTTTAATTGAAAGAATTTGGTATTGATCCAAGTTAAAATGGATCGATATAGTTTTTATGGATAAGTTCCCGACCATACCTGGGTTGAGTTGAGTTCGAGTAATCTTTTGGATAAGTT

mRNA sequence

ATGGCCGCCTGCTTTGCTCCGTCGCTCTCTGTATCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGTCAAGCACCAAAACTCGCCATCCAGAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAATGGAGGTGGGGAGTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACTTTAGCTTACATTTTTGCTCCGCAGATCAGGAGATCTATACTAAATGAAGACGAGTATGGTTTTAGGAGGGCTAGACGTCCAATCTACTATGACGACGGTCTAGAGAAAACCAGACAGACGTTGAATGAAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAAGACTCCATCTGTGCCAGTTGAAGCGGATCCGGAGATAGAAGCTACCATGTAAATACAGTTTCTAGTTGCACAGGTTTGAAGTTTCTACTTCTTAGATACCATATATCCATGTGACAATATGCCACAATTTTTAATTGAAAGAATTTGGTATTGATCCAAGTTAAAATGGATCGATATAGTTTTTATGGATAAGTTCCCGACCATACCTGGGTTGAGTTGAGTTCGAGTAATCTTTTGGATAAGTT

Coding sequence (CDS)

ATGGCCGCCTGCTTTGCTCCGTCGCTCTCTGTATCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGTCAAGCACCAAAACTCGCCATCCAGAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAATGGAGGTGGGGAGTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACTTTAGCTTACATTTTTGCTCCGCAGATCAGGAGATCTATACTAAATGAAGACGAGTATGGTTTTAGGAGGGCTAGACGTCCAATCTACTATGACGACGGTCTAGAGAAAACCAGACAGACGTTGAATGAAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAAGACTCCATCTGTGCCAGTTGAAGCGGATCCGGAGATAGAAGCTACCATGTAA

Protein sequence

MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

Homology

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BLAST of Carg23610 vs. NCBI nr
Match: XP_022944447.1 (uncharacterized protein LOC111448897 [Cucurbita moschata])

HSP 1 Score: 304.3 bits (778), Expect = 2.4e-79
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60
           MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRT+HKLSVRAEYNDGGRNG
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNG 60

Query: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120
           GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM 158
           KIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM 157

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BLAST of Carg23610 vs. NCBI nr
Match: XP_023512433.1 (uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 7.0e-79
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60
           MAACFAPSLSVSGGLIKASDLSSKSISFGQ PKLAIQRKCSRTNHKLSVRAEYNDGGR+G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQTPKLAIQRKCSRTNHKLSVRAEYNDGGRSG 60

Query: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120
           GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM 158
           KIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM 157

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BLAST of Carg23610 vs. NCBI nr
Match: XP_022986629.1 (uncharacterized protein LOC111484314 [Cucurbita maxima])

HSP 1 Score: 300.4 bits (768), Expect = 3.5e-78
Identity = 153/157 (97.45%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60
           MAAC APSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSR+NHKLSVRAEYNDGGR+G
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRSNHKLSVRAEYNDGGRSG 60

Query: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120
           GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM 158
           KIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM 157

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BLAST of Carg23610 vs. NCBI nr
Match: XP_008459202.1 (PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 8.3e-72
Identity = 141/158 (89.24%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60
           MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+TNHKLSVRAEYNDGGR+G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG 60

Query: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120
           GG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRRA+RP+YYD+GLEKTRQTLN 
Sbjct: 61  GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNA 120

Query: 121 KIGQLNSAIDNVSSRLRGGNKTPSVPV-EADPEIEATM 158
           KI QLNSAIDNVSSRLRGGN TP+VPV EA+PEIEATM
Sbjct: 121 KISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM 158

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BLAST of Carg23610 vs. NCBI nr
Match: XP_022148671.1 (uncharacterized protein LOC111017273 [Momordica charantia])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 143/157 (91.08%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60
           MAACFAPSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+KC RTN KLSVRAEYND GR G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYND-GRGG 60

Query: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120
           GG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN 
Sbjct: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120

Query: 121 KIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM 158
           KIGQLNSAIDNVSSRLRGGN TP+VPVEADPE EATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156

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BLAST of Carg23610 vs. TAIR10
Match: AT5G16660.1 (unknown protein)

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-43
Identity = 104/168 (61.90%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 1   MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTNHKLSVRAEY 60
           MA+C A + LS+SG      +KA+ LS  +K  S  +   L I +K +RT  K SV A Y
Sbjct: 1   MASCIATAPLSLSGVSQSHYVKANGLSTTTKLSSICKTSDLTIHKKSNRT-RKFSVSAGY 60

Query: 61  NDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILN-EDEYGFRRARRPIYYDDGL 120
            DG R+G  G+F+AGFLLGGAVFG +AYIFAPQIRRS+LN EDEYGF + ++P YYD+GL
Sbjct: 61  RDGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDEGL 120

Query: 121 EKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPS---VPVEADPEIEAT 157
           EKTR+TLNEKIGQLNSAIDNVSSRLRG  K  S   VPVE DPE+EAT
Sbjct: 121 EKTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVETDPEVEAT 167

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BLAST of Carg23610 vs. TAIR10
Match: AT3G02900.1 (unknown protein)

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-38
Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60
           MA+  A  +S SG     +  +  +I   ++  L +Q K +R +HKLSV A Y  G + G
Sbjct: 1   MASLVAAPISFSGDSHVKAHRNFNAIR--KSSTLTVQTKSNR-SHKLSVSAGYRGGSKGG 60

Query: 61  G-GEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLN 120
           G  +FV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF++  +P+YYD+GLE+ R+ LN
Sbjct: 61  GSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQPMYYDEGLEERREILN 120

Query: 121 EKIGQLNSAIDNVSSRLRGG-------NKTPSVPVEADPEIEAT 157
           EKIGQLNSAID VSSRL+GG         +PSVPVE D E EAT
Sbjct: 121 EKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSVPVETDAEAEAT 161

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BLAST of Carg23610 vs. TAIR10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast.)

HSP 1 Score: 81.3 bits (199), Expect = 6.0e-16
Identity = 54/135 (40.00%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 25  SISFGQAPKLAIQRKCSRTNHKLSVRAEY-NDGGRNGGGEFVAGFLLGGAVFGTLAYIFA 84
           S+SFG      +     RT   L++++ Y +D G    G FV GF+L     G L  ++A
Sbjct: 34  SVSFGLNHSNKLHISAPRTKRILTIQSAYRDDDGSGSTGLFVGGFILXXXXVGALGCVYA 93

Query: 85  PQIRRSILNEDEYGFRRARRPIYYDD--GLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNK 144
           PQI ++I   D     R      YD+   LEKTR+ L EKI QLNSAID+VSS+L+    
Sbjct: 94  PQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLK-SED 153

Query: 145 TPSVPVEADPEIEAT 157
           TP+    +  EIEAT
Sbjct: 154 TPNGAALSTDEIEAT 167

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BLAST of Carg23610 vs. TrEMBL
Match: tr|A0A1S3C9M4|A0A1S3C9M4_CUCME (uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.5e-72
Identity = 141/158 (89.24%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60
           MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+TNHKLSVRAEYNDGGR+G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG 60

Query: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120
           GG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRRA+RP+YYD+GLEKTRQTLN 
Sbjct: 61  GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNA 120

Query: 121 KIGQLNSAIDNVSSRLRGGNKTPSVPV-EADPEIEATM 158
           KI QLNSAIDNVSSRLRGGN TP+VPV EA+PEIEATM
Sbjct: 121 KISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM 158

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BLAST of Carg23610 vs. TrEMBL
Match: tr|A0A0A0LNE4|A0A0A0LNE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445770 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-58
Identity = 121/153 (79.08%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGR-- 60
           MAAC APSLSVSGGLIKASDLSSKSISFGQ PKLAI+RKCS+TNHKLSV AEYNDGGR  
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60

Query: 61  NGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYD---DGLEKTR 120
           +GGG+FVAGF LGGAVFGTLA++FAPQ+RR +LNE+E+GFRRA+RP+YYD   DGLE TR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 121 QTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVE 149
           +TLN KI QL SAIDNVSSRL+GG K P +PVE
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 153

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BLAST of Carg23610 vs. TrEMBL
Match: tr|A0A0A0LNY8|A0A0A0LNY8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G233000 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.9e-58
Identity = 120/153 (78.43%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGR-- 60
           MAACFAPSLSVSGGLIK SDLSSKSISFGQ  KLAI+RKCS+TNHKLSVRA+Y+DGGR  
Sbjct: 1   MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSG 60

Query: 61  NGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYD---DGLEKTR 120
           +GGG+FVAGF LGGAVFGTL+Y+FAPQIRR +LNE+E+GFRRA+RP+YYD   DGLE TR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 121 QTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVE 149
           +TLN KI QL SAIDNVSSRL+GG K P +PVE
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 153

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BLAST of Carg23610 vs. TrEMBL
Match: tr|A0A061EYQ8|A0A061EYQ8_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_025556 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 9.4e-56
Identity = 117/159 (73.58%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGL-IKASDL-SSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGR 60
           MA+CFAP +S+SGG  +KA ++  +KS +FG+ P LA++RK   +N + SV AEY DG R
Sbjct: 1   MASCFAP-VSISGGSHLKAREVWFTKSSTFGKTPSLAVRRKPMPSNRQFSVCAEYRDGSR 60

Query: 61  NGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTL 120
            GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTL
Sbjct: 61  GGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTL 120

Query: 121 NEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM 158
           N KI QLNSAIDNVSSRLRGGN +P+VPVE DPE+EATM
Sbjct: 121 NAKISQLNSAIDNVSSRLRGGNNSPTVPVETDPEVEATM 158

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BLAST of Carg23610 vs. TrEMBL
Match: tr|A0A2P4NC29|A0A2P4NC29_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_25571 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.6e-55
Identity = 117/160 (73.12%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 4   CFAPSLSVS---GGLIKASDL-SSKSISFGQAPKLAIQRKCSR--TNHKLSVRAEYNDGG 63
           CFAP + +S   G  + A +L S+KS SFG++PKL IQRK +R  TN KL VRAEYNDG 
Sbjct: 26  CFAPPVHISGIGGSQLNARELWSTKSNSFGKSPKLIIQRKSNRVGTNRKLFVRAEYNDGS 85

Query: 64  RNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQT 123
           R GGG+F AGFLLGGAVFGTLAY+FAPQIRRS+LNEDEYGFR+A+RPIYYD+GLE+TRQT
Sbjct: 86  RGGGGDFFAGFLLGGAVFGTLAYVFAPQIRRSLLNEDEYGFRKAKRPIYYDEGLERTRQT 145

Query: 124 LNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM 158
           LNEKI QLNSAIDNVSSRLRG +K P VPVE DPE+EAT+
Sbjct: 146 LNEKISQLNSAIDNVSSRLRGNSKMPKVPVENDPEVEATI 185

The following BLAST results are available for this feature:

BLAST of Carg23610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944447.1	2.4e-79	98.73	uncharacterized protein LOC111448897 [Cucurbita moschata]	[more]
XP_023512433.1	7.0e-79	98.09	uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]	[more]
XP_022986629.1	3.5e-78	97.45	uncharacterized protein LOC111484314 [Cucurbita maxima]	[more]
XP_008459202.1	8.3e-72	89.24	PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo]	[more]
XP_022148671.1	1.8e-71	91.08	uncharacterized protein LOC111017273 [Momordica charantia]	[more]

BLAST of Carg23610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16660.1	2.0e-43	61.90	unknown protein	[more]
AT3G02900.1	4.3e-38	54.88	unknown protein	[more]
AT1G42960.1	6.0e-16	40.00	expressed protein localized to the inner membrane of the chloroplast.	[more]

BLAST of Carg23610 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg23610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9M4\|A0A1S3C9M4_CUCME	5.5e-72	89.24	uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=...	[more]
tr\|A0A0A0LNE4\|A0A0A0LNE4_CUCSA	2.6e-58	79.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445770 PE=4 SV=1	[more]
tr\|A0A0A0LNY8\|A0A0A0LNY8_CUCSA	5.9e-58	78.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G233000 PE=4 SV=1	[more]
tr\|A0A061EYQ8\|A0A061EYQ8_THECC	9.4e-56	73.58	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_025556 PE=4 SV=1	[more]
tr\|A0A2P4NC29\|A0A2P4NC29_QUESU	1.6e-55	73.13	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_25571 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23610-RA	Carg23610-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..157
None	No IPR available	PANTHER	PTHR34048:SF3	SUBFAMILY NOT NAMED	coord: 1..157
None	No IPR available	PANTHER	PTHR34048	FAMILY NOT NAMED	coord: 1..157

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23610	Cla010245	Watermelon (97103) v1	carwmB0794
Carg23610	Csa2G445770	Cucumber (Chinese Long) v2	carcuB0813
Carg23610	Csa2G233000	Cucumber (Chinese Long) v2	carcuB0812
Carg23610	MELO3C021897	Melon (DHL92) v3.5.1	carmeB0794
Carg23610	ClCG09G017260	Watermelon (Charleston Gray)	carwcgB0769
Carg23610	CSPI02G11540	Wild cucumber (PI 183967)	carcpiB0831
Carg23610	CSPI02G27970	Wild cucumber (PI 183967)	carcpiB0832
Carg23610	CmaCh20G008980	Cucurbita maxima (Rimu)	carcmaB1104
Carg23610	CmaCh02G004480	Cucurbita maxima (Rimu)	carcmaB1105
Carg23610	CmoCh20G009060	Cucurbita moschata (Rifu)	carcmoB1073
Carg23610	CmoCh02G004570	Cucurbita moschata (Rifu)	carcmoB1074
Carg23610	Lsi10G002870	Bottle gourd (USVL1VR-Ls)	carlsiB731
Carg23610	Cp4.1LG16g02000	Cucurbita pepo (Zucchini)	carcpeB1113
Carg23610	Cp4.1LG05g12150	Cucurbita pepo (Zucchini)	carcpeB1114
Carg23610	CsGy2G011550	Cucumber (Gy14) v2	carcgybB0786
Carg23610	MELO3C021897.2	Melon (DHL92) v3.6.1	carmedB0806
Carg23610	CsaV3_2G036670	Cucumber (Chinese Long) v3	carcucB0836
Carg23610	CsaV3_2G014040	Cucumber (Chinese Long) v3	carcucB0835
Carg23610	Cla97C09G178780	Watermelon (97103) v2	carwmbB0833
Carg23610	Bhi10G001745	Wax gourd	carwgoB0930

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23610	Carg24053	Silver-seed gourd	carcarB620

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23610	Cucumber (Gy14) v1	carcgyB0906