CmoCh02G002220 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G002220
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA-binding protein, putative
LocationCmo_Chr02 : 1018558 .. 1023068 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTATCTCGACTCTTGATAGTATATAATGGCCAACTCGCGTATAACACTACTCTTGTCCACACACAACCTATTTTCCCTTCTATGGCTGTGACACTAACACTTACAAGCTTTATGTTTCTCACGTTCGTTCTCTTTGTAGTGTACAGATTTGTTTAAACATAAATAAAATTTCCCGATCTGCTTGGAAACCGAATTTGATTTTCAAAAATCAAATTCTGTAAGGAAAAGTTCGGGACATAGTTTACAGAGAAGGATGAAAATGCCATCTCTCGCTGTCCTTATCATCGCTCTCAGATCTTAGCTTTGCCAGATTTGGCTTTCTGGGTCTTCGATAATCGGTCGGTTTTCTGGAAATCTGGACTTCATTTTTCGATCTTCTGAGGAATTCAATTCAGCTTGGATCCCGTTAATCCTTCTTTTGATTCAAATGTTTTCTGGGTTTCTCAGGTTTGTTGAATTTTCGGTCGAGCAATTGATCGACGATGGATCCAGTGTTCCCAAATTGATTTTTACAATATCTGTTCTCTCGGGATATACATTTCCTGGATTGCCTCTTGATTCAAATAAGGTACTGCTTCTGTTATTGATTTGTTATTCACCGGCATTTGATTCAATTTCCTCCTCCTCTTTGAGCTTCATGAACTTACGGATTACAATTCTTCAGCTTATGTTTATACACCGATCTTCTACTAGAATGAATCGCCATAGCTGATTTTGTCCCCCCACGAATTTTGGTCGACCCCCAGTTCATTATATTAACATCTGCAATCGATATTGAGAGTTTAAAATTCTTTTTCCTTTTTTATTTGAATCGAGTGGAAATGTATGAATGCTAGGACATCTGAGTGATATGGCTTGTGTTGCTGTGGTCTGTAGGAAAAAGGAAATGCAAACTGATAGCGGCAAGTTATTTGTTGGTGGAATATCTTGGGATACTGATGAAGAACGTCTTAAAGAGTATTTCAGTGCCTTTGGTGAGGTTGTAGAAGCTGTGATTATGAAGGATCGGATCACAGGTCGCGGTCGTGGCTTCGGCTTTATTGTTTTTGTTGATCCAAATGTTGCAGATAGAGTTGTAAGGGAGAAGCATAATATTGATGGAAGAATGGTGAGTGTTAAACCTTAGATGTGTATCTCAGGACCTGCAAAGATAGCTCATGACTCGAAACTCGAAACGTTTTGTTGAGTATTTATTCTCTTCCTTTTCGAAATTTTTGATTCCGTGAAGACTGAATTTCTTTTCCATATTAGCGTTTCAGCTTGCCTTCAATCACAATAGTCTGCATTCGCCATTTTTGTGCTATTTGAACTCGAGCTTCATTGTTGAGTTTTCTTCATCCTCAGGTTGAGGCTAAAAGGGCTGTTCCCAGGAATGACCAGAACATTGTAGGTAGAACCAGTGGTACCATTAATGTTTCTCCTAGTGCTGGACGAACTAAAAAGATATTTGTTGGGGGCTTAGCATCGACTGTTACAGAGAGCGAATTCAAGAGCTATTTTGATCAATTTGGGACAATTACAGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGATTTGGGTTTATTACATATGATTCCGAAGACGCAGTAGATAAGGTTCTTATCAAGACTTTCCATGAACTGAATGGAAAAATGGTTGAAGTTAAGCGTGCAGTTCCGAAAGAGTTGTCACCAGGTCCTAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTCAATAGCTTCCTTAATGGTTATACTCAGGGGTACAGTTCGAGTACAATTGGAAGCTATGGTGTTAGAATGGATGGTAGATTTAGTCCGGTTTCTAGTGGTCGAAGTGTATTCACTCCATTTGGTTCAGGTTATGGAATGGGAGTGAACTTTGAGATTGGTTTAAACCCGGGGTACGGTGGAGCTTCCAATTTTGCCAATAATCTCAACTACGGGCGGGGACTGAGCCCGTATTATACTGGTAATTCTGATAGGTTTAGCAACATAGGTTTTGAAAGTGGCAATGGAGGAAACTCATCCTTCTTCAGCTCAGCAACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGTTCAAACTCTGCCAATTCCAATGCTCATTTGGGATCAGCAAGCGGCATCATCGGAGGAAATGCATTTGCCAATTCTGGAGTTAACTGGAGTAGTTCTGGAATCTCGTCTCAAGCGGGAGGAAATCATATTTTTAGTAACTCCGGGAGTCTAAATTATGGAGGTGTTGACAGTGGTTATACTCTTGGAGCTGGAGGGTATGGGAGGAACAGTGGTACCGTCTTGCCTCCAACGTCATCATTTTCTACCTCTGTTGGTTTTGACGGGTCCTTGGCCGATTTCTACAGTGCTAATTACAGTGATCCCACGTGGGGACCTTCCAATTTTGAAAGAGATGGATCTGGACCCATTGGTTATGGACTTGGCAATGCTGCTTCAGATGTCTCATCCAGAAGCTCTCCTGGTTTCATTGGTGGTCAAAGCGTTAATAGGAGGCAGTCGAGCAGAGGTTAGAGCCAATGATTCAAAATTTATGCAATGCCACTTTCAATTTGTTTTAGTCGTATCTCCCGATTTCTCTCGTCACAAATTTTGTTTTCCAAATGCTCTGATCATGAATTATATTTTGTTTTTGCATCTCACCGAAAGCTATCATAGCACATTTCAATTCTGCACTTGATGATCAAGATCTTAGATAGCACATTTCAATTCTGCACTTGATGATCAAGATCTTAGATAGCACATTTCAATAGTATACATGAATGTTTTGAGTTGCCAACCAAGAAAACTCATATTGTTAAGTTAGCTGCCATATTTCTACATTTTCTTTTATATAGTCAGAGTGGGAAAGATGTATGCTCAATATTGTCCTTTTCGTTATAAGAATGTTTGGTAGCTCCCAATGAACCTTATCATGAATGTCGGGATGTAACGGCCCAAATCCACCGCTAGCAGATATTGTCCTTTTTGGGGTTTCCCTTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAGAGAATGTTTCGTTCTCCTCCTCAACCAACATGGGATCTCACACGGGAGATATTTGGTGCTTGGATCTTGTGTTTGATAATATATTGTCTAATGACGTTAGATATGAGGAATTAAAACATTATTCCTGCATGTTGGTTTGTATTATTGCAATGTCTGGCTTAAGTGGCTGTTTTCTTGGGTTACCAGAAAAAAGAAGGAAACATGATTTGCATCAATTCAAATTGTTTTTTCTTTTTCATGGATAAGTTTATTTATCTCATTGCCTTGTATATGATGATTGAATTTTTACTGGTCCTGTTTGTATGCTCTGTGTTCACATGTGCATATATGCGAGCCTGAAGCCGTGCGGCTCACTCATTTGAACTCAACAAGTAGAATTTTCGTCTTTGACACACACTGGTAAGCATGGTTGTTCCTTCAAACAACCCAAATCACCGCTAGCAGATATTATCCTCTTTGGGCTTTTCCTTACGGACTTTCCCTCAAAGTTCTTAAAACGTGTCTCCTAGGGAGAGGTTTCCACACCCTTATAAAGAATTCTAACTTCTCCCCAACCGATGTGGGATCTCACGATTCGCCTCCCTTCAAGGTTCAGTGTCCTCACTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACTCCCAATCCACCCCCCTTCAAGACCTAGCGTCCTTGTTGGCACACCGCCTCGTGTCCACCTCCTTCGGGGTTCAACCTCCTCGCTGGCACATTGTCCGATATCTGGCTCTAATACTGTAACAGCCCAAACCACTAGCAGATATTGTCCTCTTTGGAATTTCCCTTTCGGACTTCCCCTTAAGATATTTAAAACTTGTCTCCTAGGAAAAGGTTTCAACACCCTTATAAAGAATGCTAAGTTCTCCTCCCCAACCGATGTGGGATCCCACGTCATCACGCAAACCTAAAGTTGAGTAGTGAAATTATGCCTTTACAATGTCCTAACGAGCGTACTGGGCAATAAGTAAATTTAGTACAGCCTCTTTGAAAGCTTTCATTAGCAAGTGTCAGCTGAAATCACAAACGCTACCAGATTATCTGTGATGTTGAATTGAATTTAGGATACCGAAGCTGAATGATCTCGTTGTAGCGTTATTCTTATTCCTTCTTTTATATATATGTACTTTTATGGTAAAAAGGAAATGAGATGCATTAGAAATGGAGTGAGAGAATATTCTCTGATATTAACTGCAGTCTCCTCCTCATTTTTGCTTCAGGAAACACTACCTAGGAATGATCGGATATGTCAACATAGTAGATGAAGATAATTGGTGAAGCATGTGAAGTTGCGGGCCAATCATAGAATATTCAGTTCAATTACCCTACAAAAAAGAAAAAAGGAAAAAAGAAGAATTATCTAAAGCTAACTGAGTGCAGATGCTGAGAACCAATCTTAAAGGTATTTAGAGCCACTTGGGATTTTGTGTCCAGGTTTG

mRNA sequence

CTTCTATCTCGACTCTTGATAGTATATAATGGCCAACTCGCGTATAACACTACTCTTGTCCACACACAACCTATTTTCCCTTCTATGGCTGTGACACTAACACTTACAAGCTTTATGTTTCTCACGTTCGTTCTCTTTGTAGTGTACAGATTTGTTTAAACATAAATAAAATTTCCCGATCTGCTTGGAAACCGAATTTGATTTTCAAAAATCAAATTCTGTAAGGAAAAGTTCGGGACATAGTTTACAGAGAAGGATGAAAATGCCATCTCTCGCTGTCCTTATCATCGCTCTCAGATCTTAGCTTTGCCAGATTTGGCTTTCTGGGTCTTCGATAATCGGTTTGTTGAATTTTCGGTCGAGCAATTGATCGACGATGGATCCAGTGTTCCCAAATTGATTTTTACAATATCTGTTCTCTCGGGATATACATTTCCTGGATTGCCTCTTGATTCAAATAAGGAAAAAGGAAATGCAAACTGATAGCGGCAAGTTATTTGTTGGTGGAATATCTTGGGATACTGATGAAGAACGTCTTAAAGAGTATTTCAGTGCCTTTGGTGAGGTTGTAGAAGCTGTGATTATGAAGGATCGGATCACAGGTCGCGGTCGTGGCTTCGGCTTTATTGTTTTTGTTGATCCAAATGTTGCAGATAGAGTTGTAAGGGAGAAGCATAATATTGATGGAAGAATGGTTGAGGCTAAAAGGGCTGTTCCCAGGAATGACCAGAACATTGTAGGTAGAACCAGTGGTACCATTAATGTTTCTCCTAGTGCTGGACGAACTAAAAAGATATTTGTTGGGGGCTTAGCATCGACTGTTACAGAGAGCGAATTCAAGAGCTATTTTGATCAATTTGGGACAATTACAGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGATTTGGGTTTATTACATATGATTCCGAAGACGCAGTAGATAAGGTTCTTATCAAGACTTTCCATGAACTGAATGGAAAAATGGTTGAAGTTAAGCGTGCAGTTCCGAAAGAGTTGTCACCAGGTCCTAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTCAATAGCTTCCTTAATGGTTATACTCAGGGGTACAGTTCGAGTACAATTGGAAGCTATGGTGTTAGAATGGATGGTAGATTTAGTCCGGTTTCTAGTGGTCGAAGTGTATTCACTCCATTTGGTTCAGGTTATGGAATGGGAGTGAACTTTGAGATTGGTTTAAACCCGGGGTACGGTGGAGCTTCCAATTTTGCCAATAATCTCAACTACGGGCGGGGACTGAGCCCGTATTATACTGGTAATTCTGATAGGTTTAGCAACATAGGTTTTGAAAGTGGCAATGGAGGAAACTCATCCTTCTTCAGCTCAGCAACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGTTCAAACTCTGCCAATTCCAATGCTCATTTGGGATCAGCAAGCGGCATCATCGGAGGAAATGCATTTGCCAATTCTGGAGTTAACTGGAGTAGTTCTGGAATCTCGTCTCAAGCGGGAGGAAATCATATTTTTAGTAACTCCGGGAGTCTAAATTATGGAGGTGTTGACAGTGGTTATACTCTTGGAGCTGGAGGGTATGGGAGGAACAGTGGTACCGTCTTGCCTCCAACGTCATCATTTTCTACCTCTGTTGGTTTTGACGGGTCCTTGGCCGATTTCTACAGTGCTAATTACAGTGATCCCACGTGGGGACCTTCCAATTTTGAAAGAGATGGATCTGGACCCATTGGTTATGGACTTGGCAATGCTGCTTCAGATGTCTCATCCAGAAGCTCTCCTGGTTTCATTGGTGGTCAAAGCGTTAATAGGAGGCAGTCGAGCAGAGGAAACACTACCTAGGAATGATCGGATATGTCAACATAGTAGATGAAGATAATTGGTGAAGCATGTGAAGTTGCGGGCCAATCATAGAATATTCAGTTCAATTACCCTACAAAAAAGAAAAAAGGAAAAAAGAAGAATTATCTAAAGCTAACTGAGTGCAGATGCTGAGAACCAATCTTAAAGGTATTTAGAGCCACTTGGGATTTTGTGTCCAGGTTTG

Coding sequence (CDS)

ATGCAAACTGATAGCGGCAAGTTATTTGTTGGTGGAATATCTTGGGATACTGATGAAGAACGTCTTAAAGAGTATTTCAGTGCCTTTGGTGAGGTTGTAGAAGCTGTGATTATGAAGGATCGGATCACAGGTCGCGGTCGTGGCTTCGGCTTTATTGTTTTTGTTGATCCAAATGTTGCAGATAGAGTTGTAAGGGAGAAGCATAATATTGATGGAAGAATGGTTGAGGCTAAAAGGGCTGTTCCCAGGAATGACCAGAACATTGTAGGTAGAACCAGTGGTACCATTAATGTTTCTCCTAGTGCTGGACGAACTAAAAAGATATTTGTTGGGGGCTTAGCATCGACTGTTACAGAGAGCGAATTCAAGAGCTATTTTGATCAATTTGGGACAATTACAGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGATTTGGGTTTATTACATATGATTCCGAAGACGCAGTAGATAAGGTTCTTATCAAGACTTTCCATGAACTGAATGGAAAAATGGTTGAAGTTAAGCGTGCAGTTCCGAAAGAGTTGTCACCAGGTCCTAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTCAATAGCTTCCTTAATGGTTATACTCAGGGGTACAGTTCGAGTACAATTGGAAGCTATGGTGTTAGAATGGATGGTAGATTTAGTCCGGTTTCTAGTGGTCGAAGTGTATTCACTCCATTTGGTTCAGGTTATGGAATGGGAGTGAACTTTGAGATTGGTTTAAACCCGGGGTACGGTGGAGCTTCCAATTTTGCCAATAATCTCAACTACGGGCGGGGACTGAGCCCGTATTATACTGGTAATTCTGATAGGTTTAGCAACATAGGTTTTGAAAGTGGCAATGGAGGAAACTCATCCTTCTTCAGCTCAGCAACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGTTCAAACTCTGCCAATTCCAATGCTCATTTGGGATCAGCAAGCGGCATCATCGGAGGAAATGCATTTGCCAATTCTGGAGTTAACTGGAGTAGTTCTGGAATCTCGTCTCAAGCGGGAGGAAATCATATTTTTAGTAACTCCGGGAGTCTAAATTATGGAGGTGTTGACAGTGGTTATACTCTTGGAGCTGGAGGGTATGGGAGGAACAGTGGTACCGTCTTGCCTCCAACGTCATCATTTTCTACCTCTGTTGGTTTTGACGGGTCCTTGGCCGATTTCTACAGTGCTAATTACAGTGATCCCACGTGGGGACCTTCCAATTTTGAAAGAGATGGATCTGGACCCATTGGTTATGGACTTGGCAATGCTGCTTCAGATGTCTCATCCAGAAGCTCTCCTGGTTTCATTGGTGGTCAAAGCGTTAATAGGAGGCAGTCGAGCAGAGGAAACACTACCTAG
Homology
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BLAST of CmoCh02G002220 vs. Swiss-Prot
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-65
Identity = 175/413 (42.37%), Postives = 243/413 (58.84%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           M +D GKLFVGGISW+TDE++L+E+F+ +GEV +A++M+D++TGR RGFGF++F DP+V 
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAG-----RTKKIFVGGLAS 120
           DRV++EKH+ID R V+ KRA+ R +Q + GRT G +N S S+G     +TKKIFVGGL  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRT-GNLNTSRSSGGDAYNKTKKIFVGGLPP 120

Query: 121 TVTESEFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKM 180
           T+T+ EF+ YF+ +G +TDV +MYD  T RPRGFGF+++DSEDAVD VL KTFH+L+GK 
Sbjct: 121 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQ 180

Query: 181 VEVKRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDG----R 240
           VEVKRA+PK+ +PG     +GG   G         GY QGY  +   SY  RMD     +
Sbjct: 181 VEVKRALPKDANPGGGGRSMGGGGSG---------GY-QGYGGNE-SSYDGRMDSNRFLQ 240

Query: 241 FSPVSSGRSVF--TPFGSGYGMGVNFEIGLNPGYGGASNFANNL-NYGRGLSPYYTGNSD 300
              V +G   +  + +G+GYG G N       GYG    +  +   YG G +  Y   + 
Sbjct: 241 HQSVGNGLPSYGSSGYGAGYGNGSN-----GAGYGAYGGYTGSAGGYGAGATAGYGATNI 300

Query: 301 RFSNIGFESGNGGNSSFFSSATQNL----WGSGGLNNGSNSANSNAHLGSASGIIGGNAF 360
             +  G  +G    +S+ + A+       +GSG  ++G     +     S SG      +
Sbjct: 301 PGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSG-YSNQGY 360

Query: 361 ANSGVNWSSSGISSQA-----GGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNS 393
              G + S SG  +QA     GG    S  GS N G   SG  +G GGYG  S
Sbjct: 361 GYGGYSGSDSGYGNQAAYGVVGGRP--SGGGSNNPG---SGGYMG-GGYGDGS 389

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BLAST of CmoCh02G002220 vs. Swiss-Prot
Match: RBP1_ARATH (RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.4e-47
Identity = 99/199 (49.75%), Postives = 136/199 (68.34%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           M  D  KLFVGGI+ +T EE LK+YFS +G V+EAV+ K+++TG+ RGFGF+ F +    
Sbjct: 1   MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRND-----------QNIVGRTSGTINVSPSAG---RTK 120
            + +R+ H I G+ V+ ++A+ +++           +  V + +G +    S G   RTK
Sbjct: 61  VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120

Query: 121 KIFVGGLASTVTESEFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIK 180
           KIFVGGL+S  TE EFKSYF++FG  TDVVVM+D  T RPRGFGF+TYDSED+V+ V+  
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180

Query: 181 TFHELNGKMVEVKRAVPKE 186
            FHEL+ K VEVKRA+PKE
Sbjct: 181 NFHELSDKRVEVKRAIPKE 199

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BLAST of CmoCh02G002220 vs. Swiss-Prot
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-45
Identity = 117/288 (40.62%), Postives = 154/288 (53.47%), Query Frame = 1 

Query: 6   GKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVADRVVR 65
           GKLFVGG+ W T +E L+ YFS +GEVV+ VIMKD+ T + RGFGF+ F DPN    V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  EK-HNIDGRMVEAKRAVPRNDQNIVGRT-SGTINVSPSA--GRTKKIFVGGLASTVTESE 125
            + H +DGR ++ K   PR  Q    R   G     P     R+ KIFVGG+     E+E
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETE 129

Query: 126 FKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKRA 185
            K YF++FG +T+VV++YD    RPRGFGFIT++ E +VD+ +   FH++ GK VEVKRA
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 189

Query: 186 VPKELSPGPSRSPLGGYNYGQSRVNSFLNGYT-------QGYS--------SSTIGSYGV 245
            P++ S   +  P G   +G   + S  NG+T       QGYS          TIG YG 
Sbjct: 190 EPRD-SKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGYG- 249

Query: 246 RMDGRFSP----------VSSGRSVFTP---FGSGYGMGVNFEIGLNP 262
           +  GR  P          VS+    F P   F  GY     F  G  P
Sbjct: 250 QPAGRGGPPPPPSFAPFLVSTTPGPFPPPQGFPPGYATPPPFGYGYGP 295

[Close]
BLAST of CmoCh02G002220 vs. Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 90/184 (48.91%), Postives = 119/184 (64.67%), Query Frame = 1 

Query: 4   DSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVADRV 63
           D GK+F+GG+SW T  E L++YF  +G++ EA++MKD  T R RGFGF+ F DPN  D+V
Sbjct: 27  DPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86

Query: 64  VRE-KHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTESEF 123
           + +  H +DG+ V+ K A PR                    RTKKIFVGGL++  T  + 
Sbjct: 87  LTQGTHELDGKKVDPKVAFPRRAH------------PKMVTRTKKIFVGGLSAPTTLEDV 146

Query: 124 KSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKRAV 183
           KSYF+QFG I D ++M+D  T R RGFGF+T+ SED VDKV    FHE+N KMVE K+A 
Sbjct: 147 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 198

Query: 184 PKEL 187
           PKE+
Sbjct: 207 PKEV 198

[Close]
BLAST of CmoCh02G002220 vs. Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-44
Identity = 111/288 (38.54%), Postives = 150/288 (52.08%), Query Frame = 1 

Query: 6   GKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVADRVVR 65
           GKLFVGG+ W T +E L+ YFS +GEVV+ VIMKD+ T + RGFGF+ F DPN    V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  EK-HNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSA--GRTKKIFVGGLASTVTESEF 125
            + H +DGR ++ K   PR  Q    R        P +   ++ KIFVGG+     E+E 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 129

Query: 126 KSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKRAV 185
           + YF +FG +T+VV++YD    RPRGFGFIT++ E +VD+ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 186 PKELSPGPSRSPLGGYNYGQSRVNSFLNGYT--------QGY--------SSSTIGSYGV 245
           P++        P G   +G   V +  NG+         QGY        +   IG YG 
Sbjct: 190 PRDSKSQAPGQP-GASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGP 249

Query: 246 RMDGRFSP----------VSSGRSVFTP---FGSGYGMGVNFEIGLNP 262
              GR +P          VS+    F P   F  GYG    F  G  P
Sbjct: 250 PPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGP 296

[Close]
BLAST of CmoCh02G002220 vs. TrEMBL
Match: A0A0A0KDX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G110300 PE=4 SV=1)

HSP 1 Score: 833.9 bits (2153), Expect = 9.4e-239
Identity = 425/476 (89.29%), Postives = 451/476 (94.75%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQTDSGKLFVGGISWDTDE+RLKEYF+A+G+VVEAVIMKDR TGRGRGFGFIVF DP+VA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           DRV+REKHNIDGRMVEAKRAVPRNDQNIVGRTSG+INVSP  GRT+KIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           EFK+YFDQFGTITDVVVMYDHNTLRPRGFGFITYDSE+AV+KVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIG YGVR+DGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRFSNIGFESGNG 300
           VFTPFGSGYGMGVNF+IGLNPGYGG SNFA+NLNYGRGLSPYYTGNSDRF NIG+ESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSAS-GIIGGNAFANSGVNWSSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNG+NSANSNAHLGSA+ G +GG  FANSGV+W SSGISSQ
Sbjct: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360

Query: 361 AGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYSA 420
            GGN++FSNSG+LNYGGVDS Y+LGAGGYGRNSGTVLPPTSSF TS VGFDG  ADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 NYSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT 475
            Y DPTW  SNFERDGSGP GYGLG+AASDVS+RSSPGFIGG SVNRRQS+RGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]
BLAST of CmoCh02G002220 vs. TrEMBL
Match: A0A0L9UUD2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g004000 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.4e-194
Identity = 352/478 (73.64%), Postives = 412/478 (86.19%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D+GKLF+GGISWDT+EERL+EYFS +GEVVEAVIMKDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           + V++EKHNIDGRMVEAK+AVPR+DQNI+ R SG+I+ SP  GRT+KIFVGGLASTVTES
Sbjct: 61  EIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           +FK YFDQFGTITDVVVMYDHNT RPRGFGFITYDSE+AVDKVL+KTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSR+PLGGYNYG SRVNSFLNG+TQGYS ST+G YG+R DGRFSPV+SGRS
Sbjct: 181 AVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVASGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRF-SNIGFESGN 300
            F PFGSGYGM +NFE GLN G+GG +NF +NL+YGRG++PY+ G+S+RF S +GFESGN
Sbjct: 241 GFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGSSNRFGSPVGFESGN 300

Query: 301 GGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNW-SSSGISS 360
           GGN+SFFSS T+NLWG+GGL+ G+NSANSNA++GS SG IGGN F N+GVNW  SS IS+
Sbjct: 301 GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGVNWGGSSAISA 360

Query: 361 QAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYS 420
           Q GGN++  +SG+L YG  D+ Y LG GGYGRN+GT    TSS+S S  G DG+ ADFYS
Sbjct: 361 QGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTTFASTSSYSASNGGVDGAFADFYS 420

Query: 421 AN--YSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNT 474
            +  Y DPTW  SN ERDGSGP GYGLG AASDVS++SSPG++GG +VN+RQ +RG T
Sbjct: 421 NSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKSSPGYVGGYTVNKRQPNRGKT 478

[Close]
BLAST of CmoCh02G002220 vs. TrEMBL
Match: A0A0S3RIZ0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G010200 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 3.2e-194
Identity = 352/479 (73.49%), Postives = 412/479 (86.01%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D+GKLF+GGISWDT+EERL+EYFS +GEVVEAVIMKDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           + V++EKHNIDGRMVEAK+AVPR+DQNI+ R SG+I+ SP  GRT+KIFVGGLASTVTES
Sbjct: 61  EIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           +FK YFDQFGTITDVVVMYDHNT RPRGFGFITYDSE+AVDKVL+KTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSR+PLGGYNYG SRVNSFLNG+TQGYS ST+G YG+R DGRFSPV+SGRS
Sbjct: 181 AVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVASGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRF-SNIGFESGN 300
            F PFGSGYGM +NFE GLN G+GG +NF +NL+YGRG++PY+ G+S+RF S +GFESGN
Sbjct: 241 GFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGSSNRFGSPVGFESGN 300

Query: 301 GGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNW-SSSGISS 360
           GGN+SFFSS T+NLWG+GGL+ G+NSANSNA++GS SG IGGN F N+GVNW  SS IS+
Sbjct: 301 GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGVNWGGSSAISA 360

Query: 361 QAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYS 420
           Q GGN++  +SG+L YG  D+ Y LG GGYGRN+GT    TSS+S S  G DG+ ADFYS
Sbjct: 361 QGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTTFASTSSYSASNGGVDGAFADFYS 420

Query: 421 AN--YSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT 475
            +  Y DPTW  SN ERDGSGP GYGLG AASDVS++SSPG++GG +VN+RQ +RG  T
Sbjct: 421 NSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKSSPGYVGGYTVNKRQPNRGIAT 479

[Close]
BLAST of CmoCh02G002220 vs. TrEMBL
Match: V7BDF1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G286500g PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 5.4e-194
Identity = 351/479 (73.28%), Postives = 412/479 (86.01%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D+GKLF+GGISWDT+EERL+EYFS +GEVVEAVIMKDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           + V++EKHNIDGRMVEAK+AVPR+DQNI+ R SG+I+ SP  GRT+KIFVGGLASTVTES
Sbjct: 61  EIVIKEKHNIDGRMVEAKKAVPRDDQNILNRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           +FK YFDQFGTITDVVVMYDHNT RPRGFGFITYDSE+AVDKVL+KTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSR+PLGGYNYG SRVNSFLNG+TQGYS S++G YG+R DGRFSPV+SGRS
Sbjct: 181 AVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSSLGGYGLRADGRFSPVASGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRF-SNIGFESGN 300
            F PFGSGYGM +NFE GLN G+GG +NF +NL+YGRG++PY+ G+S+RF S +GFESGN
Sbjct: 241 GFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGSSNRFGSPVGFESGN 300

Query: 301 GGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNW-SSSGISS 360
           GGN+SFFSS T+NLWG+GGL+ G+NSANSNA++GS SG IGGN F N+GVNW  SS IS 
Sbjct: 301 GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGVNWGGSSAISG 360

Query: 361 QAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFY- 420
           Q GGN++  +SG+L YG  D+ Y LG GGYGRN+GT   PTSS+S S  G DG+ ADFY 
Sbjct: 361 QGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTAFAPTSSYSASNGGVDGAFADFYN 420

Query: 421 -SANYSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT 475
            S+ Y DPTW  SN ERDGSGP GYGLG AASDVS+++SPG++GG +VN+RQ +RG  T
Sbjct: 421 NSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKNSPGYVGGYTVNKRQPNRGIAT 479

[Close]
BLAST of CmoCh02G002220 vs. TrEMBL
Match: F6HHL2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00480 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 6.0e-193
Identity = 349/475 (73.47%), Postives = 407/475 (85.68%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D GKLF+GGISWDT+E+RLK+YFS +GEVVEAVIMKDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDLGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           +RV++EKHNIDGRMVEAK+AVP++DQ+I+ R SG+I+ SP  GRT+KIFVGGLASTVTES
Sbjct: 61  ERVIKEKHNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           +FK YFDQFG ITDVVVMYDHNT RPRGFGFITY+SE+AVDKVL+KTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGP RS LGG+NYG SRVNSFL+ Y QGY+ ST+G YGVRMDGRFSP++ GRS
Sbjct: 181 AVPKELSPGPIRSQLGGFNYGLSRVNSFLSAYNQGYAPSTVGGYGVRMDGRFSPIAGGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRF-SNIGFESGN 300
            F PFGSGYGMG+NFE GL+  YGG++NF NNLNYGRGL+PYY GN++RF S IG++ GN
Sbjct: 241 GFPPFGSGYGMGMNFEPGLSQSYGGSANFNNNLNYGRGLNPYYIGNTNRFNSTIGYDGGN 300

Query: 301 GGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNWSSSGISSQ 360
           GGNSSFFSSAT+NLWG+GGLN G+NSA S+A  GSASG  GG AF NSG +W SS IS+Q
Sbjct: 301 GGNSSFFSSATRNLWGNGGLNFGTNSATSSAFTGSASGTTGGGAFGNSGTSWGSSLISAQ 360

Query: 361 AGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYSA 420
            GG++I SNSG+L YGG DS Y LG GGYGRNSGT + PTSS++ S  G+DG+LA+FYS 
Sbjct: 361 GGGSNISSNSGNLGYGGGDSSYGLGVGGYGRNSGTSVAPTSSYAASNSGYDGALAEFYSG 420

Query: 421 N--YSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRG 472
              Y D TW PSN ERDGSG  GYGLGNAASDV ++SSPG++GG SV +RQS+RG
Sbjct: 421 GSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRG 475

[Close]
BLAST of CmoCh02G002220 vs. TAIR10
Match: AT3G07810.2 (AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 538.5 bits (1386), Expect = 4.2e-153
Identity = 307/496 (61.90%), Postives = 375/496 (75.60%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D+GKLF+GGISWDT+EERLKEYFS+FGEV+EAVI+KDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRT-SGTINVSPSA-GRTKKIFVGGLASTVT 120
           + V+ EKHNIDGR+VEAK+AVPR+DQN+V R+ S +I  SP   GRT+KIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 ESEFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEV 180
           ES+FK+YF+QFGT TDVVVMYDHNT RPRGFGFITYDSE+AV+KVL+KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAVPKELSPGPSRSPLG-GYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSS 240
           KRAVPKELSPGPSRSPLG GY+YG +RVN+ LNGY QG++ + +G YG+RMDGRFSPV +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 GRSVFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRFS-NIGFE 300
           GRS F  + SGYGM VNF+ GL  G+ G +N+  N++YGRG+SPYY GN++RF   +G+E
Sbjct: 241 GRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYE 300

Query: 301 SGN-GGNSSFFSSATQNLWG-SGGLNNGSNSANSNAHLGSASGIIGGNA----FANSGVN 360
            GN GGNSSFFSS T+NLWG +GGLN  +N+ NSN++        G N     F NSGVN
Sbjct: 301 GGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVN 360

Query: 361 WSSSGISSQAGGNHIFSNSG-SLNYGG-VDSGYTLGAGGY-GRNSG-TVLPPTSSFST-- 420
           W + G     GGN+  SN      YGG  +SG+ LG GGY  RN G     P+SSFS+  
Sbjct: 361 WGAPG-----GGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSAS 420

Query: 421 ---SVGFD-GSLADFY--SANYSDPTWGPSNFERDGSGPIGYGLGNA--ASDVSSR-SSP 472
              + G+D   LA+FY   A YSDPTW     E +G  P  YG+G    +SDVS+R SSP
Sbjct: 421 ATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 480

[Close]
BLAST of CmoCh02G002220 vs. TAIR10
Match: AT4G26650.1 (AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 359.8 bits (922), Expect = 2.6e-99
Identity = 239/497 (48.09%), Postives = 314/497 (63.18%), Query Frame = 1 

Query: 3   TDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVADR 62
           +D GKLF+GGISWDTDEERL+EYF  +G++VEAVIM+DR TGR RGFGFIVF DP+VA+R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTIN-VSPSAG------RTKKIFVGGLAS 122
           V+ +KH IDGR VEAK+AVPR+DQ ++ R +  ++ +SPS G      RTKKIFVGGL S
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TVTESEFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKM 182
           ++TE+EFK+YFDQFGTI DVVVMYDHNT RPRGFGFIT+DSE++VD VL KTFHELNGKM
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRAVPKEL-SPGPSRSPLGGY--NYG----QSRVNSFLNGYTQGYSSSTIGSYGVRM 242
           VEVKRAVPKEL S  P+RSPL GY  NYG    +S  NS+ N +  GY+++ +GS     
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGS----- 251

Query: 243 DGRFSPVSSGRSVFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGR--GLSPYYTGN 302
            GRFSP+ SGR+ F    S +G+G+N E+ LN  + G     N L Y R  G   + + +
Sbjct: 252 AGRFSPIGSGRNAF----SSFGLGLNQELNLNSNFDG-----NTLGYSRIPGNQYFNSAS 311

Query: 303 SDRF-SNIGFESGNGGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFA 362
            +R+ S IG+  G+    S ++ + ++LWG     N S+S+    +LG + G        
Sbjct: 312 PNRYNSPIGYNRGD----SAYNPSNRDLWG-----NRSDSSGPGWNLGVSVG-------- 371

Query: 363 NSGVNWSSSGISSQAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRN--SGTVLPPTSSFS 422
           N+  NW   G+SS    N+                      GYGR+  +G+ L   S   
Sbjct: 372 NNRGNW---GLSSVVSDNN----------------------GYGRSYGAGSGLSGLSFAG 431

Query: 423 TSVGFDGSLADFY--SANYSDPTW------GPSNFERDG-SGPIGYGLGNAASDVSSRSS 472
            + GFDGS+ + Y  S+ YSD TW        S+ E DG S   G+G+ N  SD S+ +S
Sbjct: 432 NTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 452

[Close]
BLAST of CmoCh02G002220 vs. TAIR10
Match: AT5G47620.4 (AT5G47620.4 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 335.5 bits (859), Expect = 5.3e-92
Identity = 204/413 (49.39%), Postives = 266/413 (64.41%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           M+ +S KLF+GGISW+T E+RL++YF +FGEV+EAVIMKDR TGR RGFGF+VF DPNVA
Sbjct: 1   MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60

Query: 61  DRVVREKHNIDGRM----------------------VEAKRAVPRNDQNIVGRTSGTINV 120
           +RVV  KH IDG++                      VEAK+AVPR+D  +  +++ ++  
Sbjct: 61  ERVVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQG 120

Query: 121 SPSAGRTKKIFVGGLASTVTESEFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSED 180
           SP    +KKIFVGGLAS+VTE+EFK YF QFG ITDVVVMYDH T RPRGFGFI+YDSE+
Sbjct: 121 SPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEE 180

Query: 181 AVDKVLIKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSS 240
           AVDKVL KTFHELNGKMVEVK AVPK+++    R+ +   ++G SR++S LN YTQG+S 
Sbjct: 181 AVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSP 240

Query: 241 STIGSYGVRMDGRFSPVSSGRSVFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRG 300
           S I  YGV+ + R+SP    R  F+PFG GYG+ +NFE      YG  S+      +GR 
Sbjct: 241 SPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSGG----FGRP 300

Query: 301 LSPYYTGNSDRFSNIGFESGNG--GNSSFFSSATQN-LWGSGGLNNGSNSANSNAHLGSA 360
            SP Y  +  RF +   ESG    GN S  ++A +N LWG+GGL   SNS  S +   S 
Sbjct: 301 FSPGYAASLGRFGS-QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRS---SF 360

Query: 361 SGIIGGNAFANSGVNWSS-----SGISSQAGGNHIFSNSGSLNYGGVDSGYTL 384
           SG  G ++  + G NW +     S    + GG  + +  G ++ GG  SG ++
Sbjct: 361 SGNSGMSSLGSIGDNWGTVARARSSYHGERGGVGLEAMRG-VHVGGYSSGSSI 404

[Close]
BLAST of CmoCh02G002220 vs. TAIR10
Match: AT5G55550.3 (AT5G55550.3 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 326.2 bits (835), Expect = 3.2e-89
Identity = 228/497 (45.88%), Postives = 302/497 (60.76%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           M++D GKLF+GGISWDTDEERL++YFS +G+VVEAVIM+DR TGR RGFGFIVF DP V+
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINV-SP---SAGRTKKIFVGGLAST 120
           +RV+ +KH IDGR VEAK+AVPR+DQ ++ R +  I++ SP     GRTKKIFVGGL S+
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSS 120

Query: 121 VTESEFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMV 180
           +TE EFK+YFDQFGTI DVVVMYDHNT RPRGFGFIT+DS+DAVD+VL KTFHELNGK+V
Sbjct: 121 ITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLV 180

Query: 181 EVKRAVPKELSPGPS-RSPL-GGYNYG----QSRVNSFLNGYTQGYS-SSTIGSYGVRMD 240
           EVKRAVPKE+SP  + RSPL  G NYG    +   NS+ N +  G    +++G  G    
Sbjct: 181 EVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGPVG---- 240

Query: 241 GRFSPV-SSGRSVFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGR-GLSPYYTGNS 300
            RFSPV  SGR+  + F  G G+  +  + LNP   G S   +   Y R   +PY+ G S
Sbjct: 241 RRFSPVIGSGRNAVSAF--GLGLNHDLSLNLNPSCDGTS---STFGYNRIPSNPYFNGAS 300

Query: 301 -DRFSNIGFESGNGGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFAN 360
            +R+++     G+    S ++S  ++LWG     N +++A    +L  ++G        N
Sbjct: 301 PNRYTS---PIGHNRTESPYNSNNRDLWG-----NRTDTAGPGWNLNVSNG--------N 360

Query: 361 SGVNWSSSGISSQAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTSV 420
           +  NW     S+ +  N+                      G+GRN GT    +S  S+S 
Sbjct: 361 NRGNWGLPSSSAVSNDNN----------------------GFGRNYGT----SSGLSSSP 420

Query: 421 --GFDGSLADFYSAN--YSDPTW------GPSNFERDG-SGPIGYGLGNAASDVSSRSSP 473
             GF+GS+ + Y     YSD TW        S+ E D  S   GY + N  SD S+    
Sbjct: 421 FNGFEGSIGELYRGGSVYSDSTWQQQQLPSQSSHELDNLSRAYGYDIDNVGSDPSANDPE 446

[Close]
BLAST of CmoCh02G002220 vs. TAIR10
Match: AT4G14300.1 (AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 251.9 bits (642), Expect = 7.8e-67
Identity = 175/413 (42.37%), Postives = 243/413 (58.84%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           M +D GKLFVGGISW+TDE++L+E+F+ +GEV +A++M+D++TGR RGFGF++F DP+V 
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAG-----RTKKIFVGGLAS 120
           DRV++EKH+ID R V+ KRA+ R +Q + GRT G +N S S+G     +TKKIFVGGL  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRT-GNLNTSRSSGGDAYNKTKKIFVGGLPP 120

Query: 121 TVTESEFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKM 180
           T+T+ EF+ YF+ +G +TDV +MYD  T RPRGFGF+++DSEDAVD VL KTFH+L+GK 
Sbjct: 121 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQ 180

Query: 181 VEVKRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDG----R 240
           VEVKRA+PK+ +PG     +GG   G         GY QGY  +   SY  RMD     +
Sbjct: 181 VEVKRALPKDANPGGGGRSMGGGGSG---------GY-QGYGGNE-SSYDGRMDSNRFLQ 240

Query: 241 FSPVSSGRSVF--TPFGSGYGMGVNFEIGLNPGYGGASNFANNL-NYGRGLSPYYTGNSD 300
              V +G   +  + +G+GYG G N       GYG    +  +   YG G +  Y   + 
Sbjct: 241 HQSVGNGLPSYGSSGYGAGYGNGSN-----GAGYGAYGGYTGSAGGYGAGATAGYGATNI 300

Query: 301 RFSNIGFESGNGGNSSFFSSATQNL----WGSGGLNNGSNSANSNAHLGSASGIIGGNAF 360
             +  G  +G    +S+ + A+       +GSG  ++G     +     S SG      +
Sbjct: 301 PGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSG-YSNQGY 360

Query: 361 ANSGVNWSSSGISSQA-----GGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNS 393
              G + S SG  +QA     GG    S  GS N G   SG  +G GGYG  S
Sbjct: 361 GYGGYSGSDSGYGNQAAYGVVGGRP--SGGGSNNPG---SGGYMG-GGYGDGS 389

[Close]
BLAST of CmoCh02G002220 vs. NCBI nr
Match: gi|659128410|ref|XP_008464191.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo])

HSP 1 Score: 840.9 bits (2171), Expect = 1.1e-240
Identity = 430/476 (90.34%), Postives = 452/476 (94.96%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQTDSGKLFVGGISWDTDE+RLKEYF+A+G+VVEAVIMKDR TGRGRGFGFIVF DP+VA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           DRV+REKHNIDGRMVEAKRAVPRNDQNIVGRTSG+INVSP  GRT+KIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           EFK+YFDQFGTITDVVVMYDHNTLRPRGFGFITYDSE+AV+KVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIG YGVRMDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRFSNIGFESGNG 300
           VFTPFGSGYGMGVNF+IGLNPGYGG SNFANNLNYGRGLSPYYTGNSDRF NIG+ESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSAS-GIIGGNAFANSGVNWSSSGISSQ 360
           GNSSFFSSATQNLWGSGGLNNG+NSANSNAHLGSAS G IGG  FANSGV+W SSGISSQ
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASGGSIGGTGFANSGVSWGSSGISSQ 360

Query: 361 AGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYSA 420
            GGN++FSNSG+LNYGGVDS Y+LGAGGYGRNSGTVLPPTSSF TS VGFDG  ADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 NYSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT 475
            Y DPTW  SNFERDGSGP GYGLG+AASDVS+RSSPGFIGG SVNRRQS+RGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]
BLAST of CmoCh02G002220 vs. NCBI nr
Match: gi|449444504|ref|XP_004140014.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus])

HSP 1 Score: 833.9 bits (2153), Expect = 1.4e-238
Identity = 425/476 (89.29%), Postives = 451/476 (94.75%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQTDSGKLFVGGISWDTDE+RLKEYF+A+G+VVEAVIMKDR TGRGRGFGFIVF DP+VA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           DRV+REKHNIDGRMVEAKRAVPRNDQNIVGRTSG+INVSP  GRT+KIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           EFK+YFDQFGTITDVVVMYDHNTLRPRGFGFITYDSE+AV+KVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIG YGVR+DGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRFSNIGFESGNG 300
           VFTPFGSGYGMGVNF+IGLNPGYGG SNFA+NLNYGRGLSPYYTGNSDRF NIG+ESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSAS-GIIGGNAFANSGVNWSSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNG+NSANSNAHLGSA+ G +GG  FANSGV+W SSGISSQ
Sbjct: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360

Query: 361 AGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYSA 420
            GGN++FSNSG+LNYGGVDS Y+LGAGGYGRNSGTVLPPTSSF TS VGFDG  ADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 NYSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT 475
            Y DPTW  SNFERDGSGP GYGLG+AASDVS+RSSPGFIGG SVNRRQS+RGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]
BLAST of CmoCh02G002220 vs. NCBI nr
Match: gi|920703111|gb|KOM46336.1| (hypothetical protein LR48_Vigan07g004000 [Vigna angularis])

HSP 1 Score: 687.2 bits (1772), Expect = 2.0e-194
Identity = 352/478 (73.64%), Postives = 412/478 (86.19%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D+GKLF+GGISWDT+EERL+EYFS +GEVVEAVIMKDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           + V++EKHNIDGRMVEAK+AVPR+DQNI+ R SG+I+ SP  GRT+KIFVGGLASTVTES
Sbjct: 61  EIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           +FK YFDQFGTITDVVVMYDHNT RPRGFGFITYDSE+AVDKVL+KTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSR+PLGGYNYG SRVNSFLNG+TQGYS ST+G YG+R DGRFSPV+SGRS
Sbjct: 181 AVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVASGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRF-SNIGFESGN 300
            F PFGSGYGM +NFE GLN G+GG +NF +NL+YGRG++PY+ G+S+RF S +GFESGN
Sbjct: 241 GFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGSSNRFGSPVGFESGN 300

Query: 301 GGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNW-SSSGISS 360
           GGN+SFFSS T+NLWG+GGL+ G+NSANSNA++GS SG IGGN F N+GVNW  SS IS+
Sbjct: 301 GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGVNWGGSSAISA 360

Query: 361 QAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYS 420
           Q GGN++  +SG+L YG  D+ Y LG GGYGRN+GT    TSS+S S  G DG+ ADFYS
Sbjct: 361 QGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTTFASTSSYSASNGGVDGAFADFYS 420

Query: 421 AN--YSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNT 474
            +  Y DPTW  SN ERDGSGP GYGLG AASDVS++SSPG++GG +VN+RQ +RG T
Sbjct: 421 NSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKSSPGYVGGYTVNKRQPNRGKT 478

[Close]
BLAST of CmoCh02G002220 vs. NCBI nr
Match: gi|950994086|ref|XP_014505051.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Vigna radiata var. radiata])

HSP 1 Score: 686.0 bits (1769), Expect = 4.6e-194
Identity = 352/479 (73.49%), Postives = 411/479 (85.80%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D+GKLF+GGISWDT EERL+EYFS +GEVVEAVIMKDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDNGKLFIGGISWDTSEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           + V++EKHNIDGRMVEAK+AVPR+DQNI+ R SG+I+ SP  GRT+KIFVGGLASTVTES
Sbjct: 61  EIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           +FK YFDQFG ITDVVVMYDHNT RPRGFGFITYDSE+AVDKVL+KTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSR+PLGGYNYG SRVNSFLNG+TQGYS ST+G YG+R DGRFSPV+SGRS
Sbjct: 181 AVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVASGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRF-SNIGFESGN 300
            F PFGSGYGM +NFE GLN G+GG +NF +NL+YGRG++PY+ G+S+RF S +GFESGN
Sbjct: 241 GFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGSSNRFGSPVGFESGN 300

Query: 301 GGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNW-SSSGISS 360
           GGN+SFFSS T+NLWG+GGL+ G+NSANSNA++GS SG IGGN F N+GVNW  SS IS+
Sbjct: 301 GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGVNWGGSSAISA 360

Query: 361 QAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFY- 420
           Q GGN++  +SG+L YG  D+ Y LG GGYGRN+GT   PTSS+S S  G DG+ ADFY 
Sbjct: 361 QGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTTFAPTSSYSASNGGVDGAFADFYN 420

Query: 421 -SANYSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT 475
            S+ Y DPTW  SN ERDGSGP GYGLG AASDVS++SSPG++GG +VN+RQ +RG  T
Sbjct: 421 NSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKSSPGYVGGYTVNKRQPNRGIAT 479

[Close]
BLAST of CmoCh02G002220 vs. NCBI nr
Match: gi|965665024|dbj|BAT80512.1| (hypothetical protein VIGAN_03010200 [Vigna angularis var. angularis])

HSP 1 Score: 686.0 bits (1769), Expect = 4.6e-194
Identity = 352/479 (73.49%), Postives = 412/479 (86.01%), Query Frame = 1 

Query: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA 60
           MQ+D+GKLF+GGISWDT+EERL+EYFS +GEVVEAVIMKDR TGR RGFGF+VF DP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA 60

Query: 61  DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES 120
           + V++EKHNIDGRMVEAK+AVPR+DQNI+ R SG+I+ SP  GRT+KIFVGGLASTVTES
Sbjct: 61  EIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR 180
           +FK YFDQFGTITDVVVMYDHNT RPRGFGFITYDSE+AVDKVL+KTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS 240
           AVPKELSPGPSR+PLGGYNYG SRVNSFLNG+TQGYS ST+G YG+R DGRFSPV+SGRS
Sbjct: 181 AVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVASGRS 240

Query: 241 VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRF-SNIGFESGN 300
            F PFGSGYGM +NFE GLN G+GG +NF +NL+YGRG++PY+ G+S+RF S +GFESGN
Sbjct: 241 GFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGSSNRFGSPVGFESGN 300

Query: 301 GGNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNW-SSSGISS 360
           GGN+SFFSS T+NLWG+GGL+ G+NSANSNA++GS SG IGGN F N+GVNW  SS IS+
Sbjct: 301 GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGVNWGGSSAISA 360

Query: 361 QAGGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTS-VGFDGSLADFYS 420
           Q GGN++  +SG+L YG  D+ Y LG GGYGRN+GT    TSS+S S  G DG+ ADFYS
Sbjct: 361 QGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTTFASTSSYSASNGGVDGAFADFYS 420

Query: 421 AN--YSDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT 475
            +  Y DPTW  SN ERDGSGP GYGLG AASDVS++SSPG++GG +VN+RQ +RG  T
Sbjct: 421 NSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKSSPGYVGGYTVNKRQPNRGIAT 479

The following BLAST results are available for this feature:
BLAST of CmoCh02G002220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNP1_ARATH1.4e-6542.37Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 S... [more]
RBP1_ARATH6.4e-4749.75RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1[more]
DAZP1_XENLA1.6e-4540.63DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1[more]
MSIR6_DROME6.0e-4548.91RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2... [more]
DAZP1_HUMAN2.3e-4438.54DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1[more]
BLAST of CmoCh02G002220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDX2_CUCSA9.4e-23989.29Uncharacterized protein OS=Cucumis sativus GN=Csa_6G110300 PE=4 SV=1[more]
A0A0L9UUD2_PHAAN1.4e-19473.64Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g004000 PE=4 SV=1[more]
A0A0S3RIZ0_PHAAN3.2e-19473.49Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G010200 PE=... [more]
V7BDF1_PHAVU5.4e-19473.28Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G286500g PE=4 SV=1[more]
F6HHL2_VITVI6.0e-19373.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00480 PE=4 SV=... [more]
BLAST of CmoCh02G002220 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07810.24.2e-15361.90 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G26650.12.6e-9948.09 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G47620.45.3e-9249.39 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G55550.33.2e-8945.88 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G14300.17.8e-6742.37 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
BLAST of CmoCh02G002220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128410|ref|XP_008464191.1|1.1e-24090.34PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo][more]
gi|449444504|ref|XP_004140014.1|1.4e-23889.29PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus][more]
gi|920703111|gb|KOM46336.1|2.0e-19473.64hypothetical protein LR48_Vigan07g004000 [Vigna angularis][more]
gi|950994086|ref|XP_014505051.1|4.6e-19473.49PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Vigna radiata var. radiata... [more]
gi|965665024|dbj|BAT80512.1|4.6e-19473.49hypothetical protein VIGAN_03010200 [Vigna angularis var. angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003729 mRNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G002220.1CmoCh02G002220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 108..165
score: 1.1E-14coord: 8..69
score: 5.2
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 107..179
score: 3.0E-22coord: 7..78
score: 8.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 6..82
score: 17.114coord: 106..183
score: 17
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 100..189
score: 3.0E-23coord: 4..87
score: 8.6
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 100..204
score: 1.2E-24coord: 3..94
score: 1.26
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 105..329
score: 3.0E-183coord: 4..88
score: 3.0E
NoneNo IPR availablePANTHERPTHR24012:SF433RNA RECOGNITION MOTIF-CONTAINING PROTEINcoord: 105..329
score: 3.0E-183coord: 4..88
score: 3.0E