CmoCh01G017560 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	MTD1 family protein
Location	Cmo_Chr01 : 13057206 .. 13059681 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTCGTCTGCGTTTTTCTCTCTCTCTTTTTTCTTCTCTCTCCTTGGTTGTCACTGCTCAAGTTCGCGAAGTCGTCATGTCGATTGCTTTGGATAGGGTTCAGCGGGTTGAGGATAAAGGCTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCGGTGTTTGAGAGGTTGGATACTGGGGATGTGGATCACGGTGTTGAAGGCTTTGAAAAGGAGGCTGAGGAGTCCAATACTTGCAGCTCGGCTTCCAGTTCTTCTTCTTCGATCGGGAGGAACAGTGATCAGTCCGCCAGATCGTCGGACGGTGAGGAGAGTGGCGAGAGTGATGAGGTTCAGAGCTCGTATAAGGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTACCTGTCAGGTTGGTGTTCTTTCTGCTTAAGCATCTTGTTTCTCCTTTGTTTTGGATTTTACAAACTCTTTACTTTCTTGCTCGAATCTTTGTTTGGAAATTAGAAATCGGAATCATTCCTTGTCTCTAGTTTTTGAATTTGAGGGATGATCTGGAACGAGTGTGTTAAACCTATGGTTGGTGAAGCTGAAATGTTTAGAGGAGGCCTGATTGAGCTTGAAAATTTAATACTCCTGCAGTACATTGCATTTGGGAATGGGGATTGTTAATCTGTCCTTCAGAACGATGGAGTGATTCGATCTATGCTTGATCAATTAATTTTGCTTCATTTTGGACTTACTATTAGGGAATTATGTTTTCAAGCTGGCAGTGACTAGTATTTATTGCTGACAAACAGATAAAAGACTTGCGCTACTAAAAGCAGTCATTATTCTTGGCATGAATAAGACACGGCCTGTAGAAAATTGTATTCTTTAATATAGGTGAATGTGATAACAAATATGAGAAAAAAGAGCATTCTGAAGCCGAGGATTAGCAAATGACATGATTTCTTTAATACTCCTTAATCATGTGTTTACCGTCGAATGTTTTTTTATCATCTGTTTTGCCAATCTCTATAGTGGAGAGTGTGTTTCTGATCTTCTTGAGCTCAAATCAGAAAGAAATGATTGCTTTGCTGTGCATAAAAGTTGTTCTGCCTGCAAAACAATGGGGCTTTGATTTAAGCATAAAATCTAGGAAACACAATTTCTACCGTTGATTGAATCCTTTATACATTGAGGTTTTCATGCAATTATCCATTAGAACACGCACAGCCATTCTATTTGTTCCTTGATCTAATACAAAATCATTACTACATGCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCAAAGTCTTACACAAGTCTGGCTGATGCCTCTGTTTCCTCCATGAAGGAGATTGCAAAGCCGGAGAATGCCTATTCCAAGAAACGAAGGAATCTCATGGCTTACAATCTTGTGTGGGAGAAGAACCGGAGTTTCCCCCTCAAGAATAACGGTGGTGGGATATCAAAAAGACCCATCAGCTCAAGCAGAAGCTCCCTGGCTTTGGCTGTTGCTATGAGCAGTTCCGAAAGTAACTGCAGTGAGGATTCAAACTCCAGCTCATATTCAGGCTCTCCACCGCCTCTCCCACCTCTGCACCCACAATCTAGAGCATCTAACTGCAATCTGGCTTCCATGGTGCCACCTCAACGAAATTTCTCCACCTGGCGTTCATATTCCTTGGCTGATTTACAAGAGTGCGCCACCTCGGCTAATAAGGCCAATCTAACAAATCTCAACTGACCTGAAAGATTTCCATCTCCTGCTTATAGGTACGCAGGAGACCTTTTAACTGTTCTAGGAACCCTGAAATAGGAGGCTTTTCTAGTATGATTTTTAGCTCGTATGGTCGATACTGTACTCCCTATATATTATAAACCAAAACTTTCATGTCTCATTGTTTATACTGAAATGGGGATATGAAGTTAAGAGTAAAGCATAAGGTAGCAGCAGATGTTTGAGTCACTTGAGTCAACACCTGTCTGTACTGGCCTAAGACAACCAACCCAACTACTCACCCACACATAAACAGCCACCTTGAAGCTTAGTTTGGCCAATGATCCACCTCTCAAATCCTTCTTGGTCCACCAAGAGTGATAGCCAACTGCTAAGATAGCTCCTATGCTTGCGAAAATGATGCATGGAAAGATAGGGTGATCTTCTCCAGGCCATGTAATTGACTTTAGAAATTTAGTTAAGTTAACTGCCTTACAGGCTTGACATTGCTTCCCCAAACAATTTAAGGACACCATCTGCACGTTTTGACACATGTAATTCACTGGATTTGGGCTTCTGATATTGATATTTTCCCATGAGCTTCATTTATGGTACGGCTTCTTTGTTCTAGACCTTGAGAATGTAAACATACATGCACAATGTTGCAATTTGCTCGTTGGTTAAGCATTTGTAAGCATTCCCAGTGACTTTGATGAGTTTGTTTTGCTGATTGTCGTTCAATATAGATGAATTTGCCTCTTTGTTGGAT

mRNA sequence

TTCTTCTTCTTCTTCTCGTCTGCGTTTTTCTCTCTCTCTTTTTTCTTCTCTCTCCTTGGTTGTCACTGCTCAAGTTCGCGAAGTCGTCATGTCGATTGCTTTGGATAGGGTTCAGCGGGTTGAGGATAAAGGCTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCGGTGTTTGAGAGGTTGGATACTGGGGATGTGGATCACGGTGTTGAAGGCTTTGAAAAGGAGGCTGAGGAGTCCAATACTTGCAGCTCGGCTTCCAGTTCTTCTTCTTCGATCGGGAGGAACAGTGATCAGTCCGCCAGATCGTCGGACGGTGAGGAGAGTGGCGAGAGTGATGAGGTTCAGAGCTCGTATAAGGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTACCTGTCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCAAAGTCTTACACAAGTCTGGCTGATGCCTCTGTTTCCTCCATGAAGGAGATTGCAAAGCCGGAGAATGCCTATTCCAAGAAACGAAGGAATCTCATGGCTTACAATCTTGTGTGGGAGAAGAACCGGAGTTTCCCCCTCAAGAATAACGGTGGTGGGATATCAAAAAGACCCATCAGCTCAAGCAGAAGCTCCCTGGCTTTGGCTGTTGCTATGAGCAGTTCCGAAAGTAACTGCAGTGAGGATTCAAACTCCAGCTCATATTCAGGCTCTCCACCGCCTCTCCCACCTCTGCACCCACAATCTAGAGCATCTAACTGCAATCTGGCTTCCATGGTGCCACCTCAACGAAATTTCTCCACCTGGCGTTCATATTCCTTGGCTGATTTACAAGAGTGCGCCACCTCGGCTAATAAGGCCAATCTAACAAATCTCAACTGACCTGAAAGATTTCCATCTCCTGCTTATAGGTACGCAGGAGACCTTTTAACTGTTCTAGGAACCCTGAAATAGGAGGCTTTTCTAGTATGATTTTTAGCTCGTATGGTCGATACTGTACTCCCTATATATTATAAACCAAAACTTTCATGTCTCATTGTTTATACTGAAATGGGGATATGAAGTTAAGAGTAAAGCATAAGGTAGCAGCAGATGTTTGAGTCACTTGAGTCAACACCTGTCTGTACTGGCCTAAGACAACCAACCCAACTACTCACCCACACATAAACAGCCACCTTGAAGCTTAGTTTGGCCAATGATCCACCTCTCAAATCCTTCTTGGTCCACCAAGAGTGATAGCCAACTGCTAAGATAGCTCCTATGCTTGCGAAAATGATGCATGGAAAGATAGGGTGATCTTCTCCAGGCCATGTAATTGACTTTAGAAATTTAGTTAAGTTAACTGCCTTACAGGCTTGACATTGCTTCCCCAAACAATTTAAGGACACCATCTGCACGTTTTGACACATGTAATTCACTGGATTTGGGCTTCTGATATTGATATTTTCCCATGAGCTTCATTTATGGTACGGCTTCTTTGTTCTAGACCTTGAGAATGTAAACATACATGCACAATGTTGCAATTTGCTCGTTGGTTAAGCATTTGTAAGCATTCCCAGTGACTTTGATGAGTTTGTTTTGCTGATTGTCGTTCAATATAGATGAATTTGCCTCTTTGTTGGAT

Coding sequence (CDS)

ATGTCGATTGCTTTGGATAGGGTTCAGCGGGTTGAGGATAAAGGCTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCGGTGTTTGAGAGGTTGGATACTGGGGATGTGGATCACGGTGTTGAAGGCTTTGAAAAGGAGGCTGAGGAGTCCAATACTTGCAGCTCGGCTTCCAGTTCTTCTTCTTCGATCGGGAGGAACAGTGATCAGTCCGCCAGATCGTCGGACGGTGAGGAGAGTGGCGAGAGTGATGAGGTTCAGAGCTCGTATAAGGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTACCTGTCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCAAAGTCTTACACAAGTCTGGCTGATGCCTCTGTTTCCTCCATGAAGGAGATTGCAAAGCCGGAGAATGCCTATTCCAAGAAACGAAGGAATCTCATGGCTTACAATCTTGTGTGGGAGAAGAACCGGAGTTTCCCCCTCAAGAATAACGGTGGTGGGATATCAAAAAGACCCATCAGCTCAAGCAGAAGCTCCCTGGCTTTGGCTGTTGCTATGAGCAGTTCCGAAAGTAACTGCAGTGAGGATTCAAACTCCAGCTCATATTCAGGCTCTCCACCGCCTCTCCCACCTCTGCACCCACAATCTAGAGCATCTAACTGCAATCTGGCTTCCATGGTGCCACCTCAACGAAATTTCTCCACCTGGCGTTCATATTCCTTGGCTGATTTACAAGAGTGCGCCACCTCGGCTAATAAGGCCAATCTAACAAATCTCAACTGA

Homology

[Close]

BLAST of CmoCh01G017560 vs. TrEMBL
Match: A0A0A0L451_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648530 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.3e-109
Identity = 228/266 (85.71%), Postives = 242/266 (90.98%), Query Frame = 1


Query: 1   MSIALDRVQRVEDKGSGFSPEDLGYGSVFERLDTGDVDHGVEGFEK-EAEESNTCSSAS- 60
           MSI LDRV++V+DK SGFSPEDLGYGSVF+RL T DVD  VEGF+K EA+ESNTCSSAS 
Sbjct: 1   MSITLDRVRQVDDKRSGFSPEDLGYGSVFQRLVTHDVDRVVEGFQKEEADESNTCSSAST 60

Query: 61  SSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYNGKS 120
           SSSSSIGRNSDQ    SD E++GE+DEVQSSYKGPLDMMDSLEEVLPVRKGISKFY+GKS
Sbjct: 61  SSSSSIGRNSDQ----SDDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGKS 120

Query: 121 KSYTSLADA-SVSSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPIS 180
           KS+TSLADA SV+SMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPIS
Sbjct: 121 KSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPIS 180

Query: 181 SSRSSLALAVAMSSSESNCSEDSNSSSYSGSPPPLPPLHPQSRASNCNLASMVPPQRNFS 240
           SS+SSLALAVAMSSSESN SEDSN SSYS SPPP PPLHPQSR SN N  SMVPPQ+ FS
Sbjct: 181 SSKSSLALAVAMSSSESNSSEDSNCSSYSSSPPPRPPLHPQSRPSNNNFPSMVPPQKTFS 240

Query: 241 TWRSYSLADLQECATSANKANLTNLN 264
           TWRSYSLADLQECAT ANKANLTNLN
Sbjct: 241 TWRSYSLADLQECATFANKANLTNLN 262

[Close]

BLAST of CmoCh01G017560 vs. TrEMBL
Match: A0A067KCS0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07592 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63
Identity = 159/263 (60.46%), Postives = 202/263 (76.81%), Query Frame = 1


Query: 1   MSIALDRVQRVEDKG-SGFSPEDLGY---GSVFERLDTGDVDHGVEGFEKEAEESNTCSS 60
           MSIAL+  + + + G SG++   +      ++FE       +  V   E+E  E N CSS
Sbjct: 1   MSIALESSRGMREIGPSGYARGGIACVATAAIFE----SPTETRVVDAEEERAEVNECSS 60

Query: 61  --ASSSSSSIGRNSDQSAR-SSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGISKF 120
             ASS++SSIG++SD S R SSDGE   E +EVQS+YKG LD MD+LEE LP+R+GISKF
Sbjct: 61  SAASSTTSSIGKDSDLSGRESSDGENCEEENEVQSAYKGTLDAMDALEEALPMRRGISKF 120

Query: 121 YNGKSKSYTSLADASVS-SMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGIS 180
           Y+GKSKS+TSLA+AS S S+K+I KPENAY+++RRNL+A++ VWEKNRSFP +NNGGGIS
Sbjct: 121 YDGKSKSFTSLAEASSSCSIKDITKPENAYTRRRRNLLAFSHVWEKNRSFPYRNNGGGIS 180

Query: 181 KRPISSSRSSLALAVAMSSSE--SNCSEDSNSSSYSGSPPPLPPLHPQSRASNCNLASMV 240
           KRPISSS+S+LALAVAMSSSE  S+ SEDS SSS S SPP LPPLHPQSR S+ NLAS+ 
Sbjct: 181 KRPISSSKSTLALAVAMSSSESISSTSEDSTSSSNSKSPPHLPPLHPQSRTSHNNLASLP 240

Query: 241 PPQRNFSTWRSYSLADLQECATS 254
            P++NFS WRS+S+ADLQ C+T+
Sbjct: 241 SPKQNFSPWRSFSVADLQYCSTT 259

[Close]

BLAST of CmoCh01G017560 vs. TrEMBL
Match: B9RQX8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0707610 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.7e-60
Identity = 141/220 (64.09%), Postives = 180/220 (81.82%), Query Frame = 1


Query: 46  KEAEESNTCSS----ASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLE 105
           +E  E N CSS    ASS++SSIG+NSD S   S+GE   + +EVQS++KG LD MD+LE
Sbjct: 36  EERAEVNECSSSSEAASSTTSSIGKNSDLS---SNGENCEDENEVQSAFKGTLDAMDALE 95

Query: 106 EVLPVRKGISKFYNGKSKSYTSLADASVSS-MKEIAKPENAYSKKRRNLMAYNLVWEKNR 165
           E L +R+GISKFYNGKSKS+TSLA+AS SS +KEI KPENAY+++RRNL+A+N VW+KNR
Sbjct: 96  EALSMRRGISKFYNGKSKSFTSLAEASSSSCIKEITKPENAYTRRRRNLLAFNHVWDKNR 155

Query: 166 SFPLKNNGGGISKRPISSSRSSLALAVAMSSSE--SNCSEDSNSSSYSGSPPPLPPLHPQ 225
           SFP ++NGGGISKRPISSS+S+LALAVAMSSSE  S+ SEDS SSS S +P  LPPLHP+
Sbjct: 156 SFPHRSNGGGISKRPISSSKSTLALAVAMSSSESISSASEDSTSSSMSNTPTHLPPLHPR 215

Query: 226 SRASNCNLASMVPPQRNFSTWRSYSLADLQECATSANKAN 259
           SR  + NLAS+  P++NFS WRS+S+ADLQ+CAT+++K +
Sbjct: 216 SRTYHNNLASLPSPRQNFSPWRSFSVADLQQCATTSDKTD 252

[Close]

BLAST of CmoCh01G017560 vs. TrEMBL
Match: W9RF79_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018609 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 156/261 (59.77%), Postives = 189/261 (72.41%), Query Frame = 1


Query: 1   MSIALDRVQRVEDKGSGFSPEDLGYGSVFERLDTGDVDHGVEGFEKEAEESNTCS----- 60
           MSIALD  +R++ K SG        G VF+    G +     G     +ESN C+     
Sbjct: 1   MSIALDNNRRMDMKSSGIMR-----GLVFDSPVEGRIAGA--GDSDTVKESNACNNETSS 60

Query: 61  -----SASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGI 120
                SAS+SSSSIG+NSD S RSS   +  E +E QSSYKGPL+MM++LEEVLP+R+GI
Sbjct: 61  ASASASASASSSSIGKNSDLSVRSSSDGDDCEENEAQSSYKGPLEMMEALEEVLPIRRGI 120

Query: 121 SKFYNGKSKSYTSLADA-SVSSMKEIAKPENAYSKKRRNLMAYNLVWE-KNRSFPLKNNG 180
           SKFYNGKSKS+TSL DA S SS+K+I KPENAY++KRRNLMA+N VW+ KNRSFPL++NG
Sbjct: 121 SKFYNGKSKSFTSLGDAASTSSIKDITKPENAYTRKRRNLMAFNHVWDNKNRSFPLRSNG 180

Query: 181 GGISKRPISSSRSSLALAVAMSSSESNCSEDSNSSSYSGSPPPLPPLHPQSRASNCNLAS 240
           GGISKRPISSSRSSLALA+AMSSSES+ S   +SSS S  PPPLPPLHPQ+RAS  ++ S
Sbjct: 181 GGISKRPISSSRSSLALAMAMSSSESSSSTSDDSSSRS--PPPLPPLHPQARAS-FHVKS 240

Query: 241 MVPPQRNFSTWRSYSLADLQE 250
              P R+F   RS SLADLQ+
Sbjct: 241 STSPPRHFCASRSLSLADLQQ 251

[Close]

BLAST of CmoCh01G017560 vs. TrEMBL
Match: A5B5R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02000 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.3e-59
Identity = 162/262 (61.83%), Postives = 196/262 (74.81%), Query Frame = 1


Query: 1   MSIALDRVQ-RVEDKGSGFSPEDLGYGSVFE--RLDTGDVDHGVEG-FEKEAEESNTCSS 60
           MSIALDR   R+E  GSGF    +   S+FE   L TGD      G    +AEE      
Sbjct: 1   MSIALDRSSNRIE--GSGFM-HGMSCISIFESPELLTGDRRFPAGGEMAAKAEEREEELD 60

Query: 61  ASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYNG 120
           + SSSSSIG+NSD S  SSD E+SGE+ EVQSSYK PLD M++LEEVLP+R+GIS+FYNG
Sbjct: 61  SCSSSSSIGKNSDVSGMSSDQEDSGET-EVQSSYKRPLDSMNALEEVLPLRRGISRFYNG 120

Query: 121 KSKSYTSLADASVS-SMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRP 180
           KSKS+TSLADAS S S K++AKPENAY+++RRNL+AYN V +KNR+FPL++NGGGISK+ 
Sbjct: 121 KSKSFTSLADASTSASCKDLAKPENAYNRRRRNLLAYNHVLDKNRNFPLRSNGGGISKKL 180

Query: 181 ISSSRSSLALAVAMSSSES-NCSEDSNSSSYSGSPPP---LPPLHPQSRASNCNLASMVP 240
            ++SRS+LALAVAMSSS+S N SED NSS    S  P   LPPLHPQ+R  + N++S  P
Sbjct: 181 AATSRSTLALAVAMSSSDSNNSSEDLNSSLNCISRSPSLLLPPLHPQARLYHNNVSSS-P 240

Query: 241 PQRNFSTWRSYSLADLQECATS 254
           PQRN S WRSYSLADLQ+CATS
Sbjct: 241 PQRNLSAWRSYSLADLQQCATS 257

[Close]

BLAST of CmoCh01G017560 vs. TAIR10
Match: AT5G21940.1 (AT5G21940.1 unknown protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 1


Query: 44  FEKEAEESNTCSSASSS-SSSIGRNSDQSARSSD--GEESGESDEVQSSYKGPLDMMDSL 103
           F      S++ SS SSS SSSIGRNSD   +SS+  G+++GE+ EV+S YKGPL+MM+SL
Sbjct: 23  FSPSPSPSDSSSSPSSSASSSIGRNSDDGEKSSEDGGDDAGEN-EVESPYKGPLEMMESL 82

Query: 104 EEVLPVRKGISKFYNGKSKSYTSL------ADASVSSMKEIAKPENAYSKKRRNLMAYNL 163
           E+VLPVRKGISK+Y+GKSKS+T+L      A  S SSMK++AKPEN YS++RRNL+ +  
Sbjct: 83  EQVLPVRKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQ- 142

Query: 164 VWEKNRSFPLKNNGGGISKRPI-SSSRSSLALAVAMS--------SSESNCSEDSNSSSY 223
           +WE N++ P     GGISK+ + SSSRS+L LA+A++        SS    S   +S + 
Sbjct: 143 IWENNKTTPR----GGISKKHVMSSSRSALTLAMAVAAGVMTGEGSSSGGDSSPGSSPTT 202

Query: 224 SGSPP-----------PLPPLHPQSRASNCNLASMVPPQRNFSTWRSYSLADLQEC 251
           SGSPP            LPPL+P+S+ S  NL S       F  WRS+S+AD   C
Sbjct: 203 SGSPPRQLHHHQHQMKKLPPLYPRSQGSFGNLTSS-QSSLGFCAWRSFSVADFPRC 251

[Close]

BLAST of CmoCh01G017560 vs. TAIR10
Match: AT3G43850.1 (AT3G43850.1 unknown protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-22
Identity = 65/155 (41.94%), Postives = 95/155 (61.29%), Query Frame = 1


Query: 49  EESNTCSSASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRK 108
           ++   C S+S+SS SIG NSD        ++ G  +E++SSY GPLDMM+SLEE LP+++
Sbjct: 15  DQEFACLSSSTSSDSIGENSD--------DDEGGENEIESSYNGPLDMMESLEEALPIKR 74

Query: 109 GISKFYNGKSKSYTSLADASVSSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNG 168
            ISKFY GKSKS+ SL++ S   +K++ KPEN YS++RRNL+++ +            + 
Sbjct: 75  AISKFYKGKSKSFMSLSETSSLPVKDLTKPENLYSRRRRNLLSHRIC-----------SR 134

Query: 169 GGISKRPISSSRSSLALAVAMSSSESNCSEDSNSS 204
           GGISK+P  S        +AMS  E + S   + S
Sbjct: 135 GGISKKPFKS-------VLAMSQREGDSSSSGDDS 143

[Close]

BLAST of CmoCh01G017560 vs. TAIR10
Match: AT2G24550.1 (AT2G24550.1 unknown protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08
Identity = 46/125 (36.80%), Postives = 70/125 (56.00%), Query Frame = 1


Query: 43  GFEKEAEESNTCSSASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMD-SLE 102
           G       + +   +S SSSSIG        SS+ EE  E D+  S  +G LD    SLE
Sbjct: 50  GLRMSNNNNKSPEESSDSSSSIGE-------SSENEEEEEEDDAVSCQRGTLDSFSSSLE 109

Query: 103 EVLPVRKGISKFYNGKSKSYTSLADASVSSMKEIAKPENAYSKKRRNLMAYNLVWEKNRS 162
           + LP+++G+S  Y GKSKS+ +L +A+ S  K++ K EN ++K+RR ++A N +  + RS
Sbjct: 110 DSLPIKRGLSNHYVGKSKSFGNLMEAA-SKAKDLEKVENPFNKRRRLVIA-NKLRRRGRS 165

Query: 163 FPLKN 167
               N
Sbjct: 170 MSASN 165

[Close]

BLAST of CmoCh01G017560 vs. TAIR10
Match: AT5G24890.1 (AT5G24890.1 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 1


Query: 38  DHGVEGFEKEAEESNTCSSASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKG--PLD 97
           + GVE        S   +  SS SSSIG   D  +   + E   E+D+V S   G   L 
Sbjct: 39  EEGVEESGLSRIWSGQTADYSSDSSSIGTPGD--SEEDEEESENENDDVSSKELGLRGLA 98

Query: 98  MMDSLEEVLPVRKGISKFYNGKSKSYTSLADASVSSMKEIAKPENAYSKKRRNLMAYNLV 157
            M SLE+ LP ++G+S  Y GKSKS+ +L +  + S+KE+AK EN  +K+RR  +   L 
Sbjct: 99  SMSSLEDSLPSKRGLSNHYKGKSKSFGNLGE--IGSVKEVAKQENPLNKRRRLQICNKLA 158

Query: 158 ------WEKNRSFPL 165
                 W+  +S PL
Sbjct: 159 RKSFYSWQNPKSMPL 169

[Close]

BLAST of CmoCh01G017560 vs. NCBI nr
Match: gi|449447177|ref|XP_004141345.1| (PREDICTED: vitellogenin-2-like [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 3.3e-109
Identity = 228/266 (85.71%), Postives = 242/266 (90.98%), Query Frame = 1


Query: 1   MSIALDRVQRVEDKGSGFSPEDLGYGSVFERLDTGDVDHGVEGFEK-EAEESNTCSSAS- 60
           MSI LDRV++V+DK SGFSPEDLGYGSVF+RL T DVD  VEGF+K EA+ESNTCSSAS 
Sbjct: 1   MSITLDRVRQVDDKRSGFSPEDLGYGSVFQRLVTHDVDRVVEGFQKEEADESNTCSSAST 60

Query: 61  SSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYNGKS 120
           SSSSSIGRNSDQ    SD E++GE+DEVQSSYKGPLDMMDSLEEVLPVRKGISKFY+GKS
Sbjct: 61  SSSSSIGRNSDQ----SDDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGKS 120

Query: 121 KSYTSLADA-SVSSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPIS 180
           KS+TSLADA SV+SMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPIS
Sbjct: 121 KSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPIS 180

Query: 181 SSRSSLALAVAMSSSESNCSEDSNSSSYSGSPPPLPPLHPQSRASNCNLASMVPPQRNFS 240
           SS+SSLALAVAMSSSESN SEDSN SSYS SPPP PPLHPQSR SN N  SMVPPQ+ FS
Sbjct: 181 SSKSSLALAVAMSSSESNSSEDSNCSSYSSSPPPRPPLHPQSRPSNNNFPSMVPPQKTFS 240

Query: 241 TWRSYSLADLQECATSANKANLTNLN 264
           TWRSYSLADLQECAT ANKANLTNLN
Sbjct: 241 TWRSYSLADLQECATFANKANLTNLN 262

[Close]

BLAST of CmoCh01G017560 vs. NCBI nr
Match: gi|659104048|ref|XP_008452790.1| (PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo])

HSP 1 Score: 403.3 bits (1035), Expect = 3.3e-109
Identity = 228/267 (85.39%), Postives = 242/267 (90.64%), Query Frame = 1


Query: 1   MSIALDRVQRVEDKGSGFSPEDLGYGSVFERLDTGDVDHGVEGFEKE--AEESNTCSSAS 60
           MSI LDRV++V+ K SGFSPEDLGYGSVF+RL T DVD  VEGF+KE  A+ESNTCSSAS
Sbjct: 1   MSITLDRVRQVDGKRSGFSPEDLGYGSVFQRLVTQDVDRAVEGFQKEEDADESNTCSSAS 60

Query: 61  -SSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYNGK 120
            SSSSSIGRNSDQ    SD E++GE+DEVQSSYKGPLDMMDSLEEVLPVRKGISKFY+GK
Sbjct: 61  TSSSSSIGRNSDQ----SDDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGK 120

Query: 121 SKSYTSLADA-SVSSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPI 180
           SKS+TSLADA SV+SMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPI
Sbjct: 121 SKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPI 180

Query: 181 SSSRSSLALAVAMSSSESNCSEDSNSSSYSGSPPPLPPLHPQSRASNCNLASMVPPQRNF 240
           SSS+SSLALAVAMSSSESN SEDSNSSSYS SPPP PPLHPQSR SN N  SMVPPQ+ F
Sbjct: 181 SSSKSSLALAVAMSSSESNSSEDSNSSSYSSSPPPRPPLHPQSRPSNNNFPSMVPPQKTF 240

Query: 241 STWRSYSLADLQECATSANKANLTNLN 264
           STWRSYSLADLQECAT ANKANLTNLN
Sbjct: 241 STWRSYSLADLQECATFANKANLTNLN 263

[Close]

BLAST of CmoCh01G017560 vs. NCBI nr
Match: gi|802629437|ref|XP_012077185.1| (PREDICTED: serine/arginine repetitive matrix protein 2-like [Jatropha curcas])

HSP 1 Score: 251.5 bits (641), Expect = 1.6e-63
Identity = 159/263 (60.46%), Postives = 202/263 (76.81%), Query Frame = 1


Query: 1   MSIALDRVQRVEDKG-SGFSPEDLGY---GSVFERLDTGDVDHGVEGFEKEAEESNTCSS 60
           MSIAL+  + + + G SG++   +      ++FE       +  V   E+E  E N CSS
Sbjct: 1   MSIALESSRGMREIGPSGYARGGIACVATAAIFE----SPTETRVVDAEEERAEVNECSS 60

Query: 61  --ASSSSSSIGRNSDQSAR-SSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGISKF 120
             ASS++SSIG++SD S R SSDGE   E +EVQS+YKG LD MD+LEE LP+R+GISKF
Sbjct: 61  SAASSTTSSIGKDSDLSGRESSDGENCEEENEVQSAYKGTLDAMDALEEALPMRRGISKF 120

Query: 121 YNGKSKSYTSLADASVS-SMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGIS 180
           Y+GKSKS+TSLA+AS S S+K+I KPENAY+++RRNL+A++ VWEKNRSFP +NNGGGIS
Sbjct: 121 YDGKSKSFTSLAEASSSCSIKDITKPENAYTRRRRNLLAFSHVWEKNRSFPYRNNGGGIS 180

Query: 181 KRPISSSRSSLALAVAMSSSE--SNCSEDSNSSSYSGSPPPLPPLHPQSRASNCNLASMV 240
           KRPISSS+S+LALAVAMSSSE  S+ SEDS SSS S SPP LPPLHPQSR S+ NLAS+ 
Sbjct: 181 KRPISSSKSTLALAVAMSSSESISSTSEDSTSSSNSKSPPHLPPLHPQSRTSHNNLASLP 240

Query: 241 PPQRNFSTWRSYSLADLQECATS 254
            P++NFS WRS+S+ADLQ C+T+
Sbjct: 241 SPKQNFSPWRSFSVADLQYCSTT 259

[Close]

BLAST of CmoCh01G017560 vs. NCBI nr
Match: gi|1009134368|ref|XP_015884409.1| (PREDICTED: uncharacterized protein LOC107420059 [Ziziphus jujuba])

HSP 1 Score: 245.0 bits (624), Expect = 1.5e-61
Identity = 152/259 (58.69%), Postives = 191/259 (73.75%), Query Frame = 1


Query: 1   MSIALDRVQRVEDKGSGFSPEDLGYGSVF---------ERLDTGDVDHGVEGFEKEAEES 60
           MSIA    + ++ + +GF+   +    VF         ER+     D+ V    KE+  +
Sbjct: 1   MSIAFHSNRGIDIQTNGFTRAPVTCSLVFDSPEFPPEKERVAAVSGDNAV----KESIIA 60

Query: 61  NTCSSASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLEEVLPVRKGIS 120
              S++SSSSSSIG+NSD S RSS   E  E +E QSSYKGPL+MM++LEEVLPVR+GIS
Sbjct: 61  CGASTSSSSSSSIGKNSDLSGRSSSDGEECEENEAQSSYKGPLEMMEALEEVLPVRRGIS 120

Query: 121 KFYNGKSKSYTSLADASVSSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGI 180
           KFYNGKSKS+ SL DAS +S+ +I KPENAY++KRRNL+A N  W+KNR+FPL++NGGGI
Sbjct: 121 KFYNGKSKSFASLGDASSTSINDIVKPENAYTRKRRNLLASNHFWDKNRNFPLRSNGGGI 180

Query: 181 SKRPISSSRSSLALAVAMSSSESNC-SEDSNSSSYSGSPPPLPPLHPQSRASNCNLASMV 240
           +KR ISSSRS+LALA+AMSSSES+C SEDSNSSS S SPP LPPLHPQSRASNCN  S  
Sbjct: 181 AKRSISSSRSTLALAMAMSSSESSCTSEDSNSSSASRSPPSLPPLHPQSRASNCNKFSTS 240

Query: 241 PPQRNFSTWRSYSLADLQE 250
           PP+R+  + RS SLADL++
Sbjct: 241 PPRRSLYSSRSLSLADLEQ 255

[Close]

BLAST of CmoCh01G017560 vs. NCBI nr
Match: gi|255550193|ref|XP_002516147.1| (PREDICTED: uncharacterized protein LOC8258594 [Ricinus communis])

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-59
Identity = 141/220 (64.09%), Postives = 180/220 (81.82%), Query Frame = 1


Query: 46  KEAEESNTCSS----ASSSSSSIGRNSDQSARSSDGEESGESDEVQSSYKGPLDMMDSLE 105
           +E  E N CSS    ASS++SSIG+NSD S   S+GE   + +EVQS++KG LD MD+LE
Sbjct: 36  EERAEVNECSSSSEAASSTTSSIGKNSDLS---SNGENCEDENEVQSAFKGTLDAMDALE 95

Query: 106 EVLPVRKGISKFYNGKSKSYTSLADASVSS-MKEIAKPENAYSKKRRNLMAYNLVWEKNR 165
           E L +R+GISKFYNGKSKS+TSLA+AS SS +KEI KPENAY+++RRNL+A+N VW+KNR
Sbjct: 96  EALSMRRGISKFYNGKSKSFTSLAEASSSSCIKEITKPENAYTRRRRNLLAFNHVWDKNR 155

Query: 166 SFPLKNNGGGISKRPISSSRSSLALAVAMSSSE--SNCSEDSNSSSYSGSPPPLPPLHPQ 225
           SFP ++NGGGISKRPISSS+S+LALAVAMSSSE  S+ SEDS SSS S +P  LPPLHP+
Sbjct: 156 SFPHRSNGGGISKRPISSSKSTLALAVAMSSSESISSASEDSTSSSMSNTPTHLPPLHPR 215

Query: 226 SRASNCNLASMVPPQRNFSTWRSYSLADLQECATSANKAN 259
           SR  + NLAS+  P++NFS WRS+S+ADLQ+CAT+++K +
Sbjct: 216 SRTYHNNLASLPSPRQNFSPWRSFSVADLQQCATTSDKTD 252

The following BLAST results are available for this feature:

BLAST of CmoCh01G017560 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G017560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L451_CUCSA	2.3e-109	85.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648530 PE=4 SV=1	[more]
A0A067KCS0_JATCU	1.1e-63	60.46	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07592 PE=4 SV=1	[more]
B9RQX8_RICCO	9.7e-60	64.09	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0707610 PE=4 SV=1	[more]
W9RF79_9ROSA	1.7e-59	59.77	Uncharacterized protein OS=Morus notabilis GN=L484_018609 PE=4 SV=1	[more]
A5B5R8_VITVI	6.3e-59	61.83	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02000 PE=4 SV=...	[more]

BLAST of CmoCh01G017560 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21940.1	1.4e-36	48.31	unknown protein	[more]
AT3G43850.1	4.2e-22	41.94	unknown protein	[more]
AT2G24550.1	2.0e-08	36.80	unknown protein	[more]
AT5G24890.1	7.7e-08	36.30	unknown protein	[more]

BLAST of CmoCh01G017560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447177\|ref\|XP_004141345.1\|	3.3e-109	85.71	PREDICTED: vitellogenin-2-like [Cucumis sativus]	[more]
gi\|659104048\|ref\|XP_008452790.1\|	3.3e-109	85.39	PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo]	[more]
gi\|802629437\|ref\|XP_012077185.1\|	1.6e-63	60.46	PREDICTED: serine/arginine repetitive matrix protein 2-like [Jatropha curcas]	[more]
gi\|1009134368\|ref\|XP_015884409.1\|	1.5e-61	58.69	PREDICTED: uncharacterized protein LOC107420059 [Ziziphus jujuba]	[more]
gi\|255550193\|ref\|XP_002516147.1\|	1.4e-59	64.09	PREDICTED: uncharacterized protein LOC8258594 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G017560.1	CmoCh01G017560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33172	FAMILY NOT NAMED	coord: 45..263 score: 7.7
None	No IPR available	PANTHER	PTHR33172:SF6	SUBFAMILY NOT NAMED	coord: 45..263 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G017560	Cucsa.271090	Cucumber (Gy14) v1	cgycmoB0748
CmoCh01G017560	CmaCh09G003690	Cucurbita maxima (Rimu)	cmacmoB050
CmoCh01G017560	Cla007456	Watermelon (97103) v1	cmowmB435
CmoCh01G017560	Csa4G648530	Cucumber (Chinese Long) v2	cmocuB463
CmoCh01G017560	MELO3C016917	Melon (DHL92) v3.5.1	cmomeB424
CmoCh01G017560	ClCG05G015790	Watermelon (Charleston Gray)	cmowcgB413
CmoCh01G017560	CSPI04G25780	Wild cucumber (PI 183967)	cmocpiB467
CmoCh01G017560	Lsi04G013820	Bottle gourd (USVL1VR-Ls)	cmolsiB416
CmoCh01G017560	Cp4.1LG02g05790	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G017560	MELO3C016917.2	Melon (DHL92) v3.6.1	cmomedB488
CmoCh01G017560	CsaV3_4G036090	Cucumber (Chinese Long) v3	cmocucB0553
CmoCh01G017560	Cla97C05G096760	Watermelon (97103) v2	cmowmbB462
CmoCh01G017560	Bhi09G002528	Wax gourd	cmowgoB0601
CmoCh01G017560	CsGy4G024080	Cucumber (Gy14) v2	cgybcmoB486
CmoCh01G017560	Carg10721	Silver-seed gourd	carcmoB1045

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G017560	CmoCh09G003680	Cucurbita moschata (Rifu)	cmocmoB020

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G017560	Silver-seed gourd	carcmoB0874
CmoCh01G017560	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G017560	Cucurbita pepo (Zucchini)	cmocpeB467