ClCG05G015790 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTTTCTTCTGCTTCTTCTTCTCGTCTGTGTTTTTTCTTTCCTTCTCTCTCCTTGTTGTCACTGTTCATATTCAAAGTCGTCATGTCGATTACTTTGGATAGGGTTCGGCAGGTTGAAGATAAACGCTCTGGATTCTCGCCGGAGGATTTGGGCTATGGATCCGTCTTTCAGAGATTGGTGAATCAGGATGTGGATCGCACTGTTGAAGGGTTTGAAAAGGAGGAGGCTGACGAATCTAATACTTGCAGCTCCGCTTCTACTTCTTCGTCTTCTTCGATCGGGAGGAATAGTGATCAGTCCGCTAGATCCTCCGACGGTGAGGATAGCGGCGAGAATGATGAGGTTCAGAGCTCCTATAAAGGGCCACTGGATATGATGGACTCCTTGGAGGAGGTTTTGCCTGTCAGGTTGGTGTTCTTTCTATTTGTTAATTTCTCATTTGTTTTGGATGCTATCAACTCGTACTTTCTTGCGCGATCTTAGTTTGGTAATATTGCATTGCAAATCTAAATCATTTCTGGTCTCTAGTTCTTAAATTTGATGGATGATCTGAAACGGGTTTAGGGAAGGCTTGATTGAGCTTGAAAATTTAGTACTCTTGTAGTACAAATGCATTAGGGATTTAGGATAATTAATCTGCCCTGTAGAATGATGGAGTCATTTGATCTAAGCTTGATTATTGATCAACTAGTATTTAATGCTGACAAACAGATGAAATATTTAGATTCGACTCTCGCAAGAGTCATTAGTCTGTGCATGAACAAGTCGTGGTCTGTGGAAACATGTCTGCTGATTTATTGTAAGATTAATGCAATGATAAACTCGAGATAACTATATGTTTTCGGTGGGTTAATAATGAGAAAAGAGAGCAATTCGAATCTGGAGATTAGCAATTGACATCATTTCTTTAGTGAACTTTAATCGTGAGTTTACCATCGATTTCTTTTATCCTCTTTCTTGCCACTCTGTATAGTGGAGATCGTGTTTCTGAGATCTTTTTAAGCTCAGTCAGAAAGAAATCATTGCTTTGGAGTGCATTATCATGTTAAAAATTGTTCTGCGACACTGCAAGACAATGACTACTTTTGATTTTAGCTTTAAGATTTCAGTAACACTATCTCTACTTTTGAGATTGGAAAAAGGGATTGAGTACCCAATACAGTGGAGTTCTAATGCAATTTTGCAGCAGCGCACACACACATACATGATACACGTATTCTATTTGTTTCTTTATCTAACAAACAATTATTACAACATGCAGAAAAGGCATCTCAAAGTTCTATAGTGGAAAATCAAAGTCTTTCACGAGTCTGGCCGATGCCTCCTCTGTTAACTCCATGAAGGAGATTGCGAAGCCAGAGAATGCCTATTCCAAGAAACGTAGGAATCTTATGGCGTATAATCTTGTGTGGGAGAAGAACCGGAGTTTTCCTCTCAAGAATAACGGTGGTGGGATATCAAAGAGACCCATCAGCTCAAGCAGAAGCTCCTTAGCTTTGGCTGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAGGATTCAAATTCTAGCTCATATTCAAGCTCTCCACCGCCTCGCCCACCTCTACACCCACAATCCAGACCATCTAACAGCAATTTCGCTTCCATGGTGCCACCTCAAAGAACTTTCTCCACTTGGCGTTCATATTCCTTGGCCGATTTACAAGAATGCGCCACCTTTGCTAATAAGGCCAACCTAACCAATCTGAACTGACCCGGAAAATTTACTTCTCTTGCATAGGTACGCAAGAGTACTTTTAACTATTCTAGGAACCCTGAAATAGGAGGTTTTTTCTAGTATGATTTTAGGACTTATGGTCGTTGCTGTACTCTATATATTAAAATCCAAAAACTTTCATGTCTCATTGTTTATAATGAAATGGGGATATGAAATTAAGAGCAAAGCTGAAGTAGCAGACTTGTGAGTCACATTTGTCAACACCTGTCTGTATTGGCCTAAAACAAGACACAACTATCTCAACTACCCACCCACACATAAACAGCCACCTTGAAGGTTAGTTTGACTGATGAAAACCACAACTTCCAAATTCCTTTTGGTTCACCAAGATTGAATATCTGGTTGGTTTAGTGCTTCTAAAAGCGTTCTTATGCTTTACAGAAACAAGCTGCTACAATTGACATAGACCTTCCACAATCCCATGTAATTGACTTTATAACTAAGTTGATTTGTTATGTTAAACTGCCCCTTATAGTCCTAACATTGGTTCCCCATATACTGTATGAGACACTCCCAGTAACATTTAAAGACATCTGCACGTTTTGACACATGTAGTTCATAGGATCTGGGCCCCTGGTATTTCATATTTTCCCATGAGCTTCATTTATGGTTGGATTTCACTACGGCTTCTTTCTTCTAGATCTTGAGAATGTAAGACATGCACTATGCTGCAATTTGCTCGTTGCTTAAGCATTTTGTAAGCATCATTCCCAATGACATTGATGAGTTTCTTTTCCTGCTTGCCTTTCAG CTTCTTTCTTCTGCTTCTTCTTCTCGTCTGTGTTTTTTCTTTCCTTCTCTCTCCTTGTTGTCACTGTTCATATTCAAAGTCGTCATGTCGATTACTTTGGATAGGGTTCGGCAGGTTGAAGATAAACGCTCTGGATTCTCGCCGGAGGATTTGGGCTATGGATCCGTCTTTCAGAGATTGGTGAATCAGGATGTGGATCGCACTGTTGAAGGGTTTGAAAAGGAGGAGGCTGACGAATCTAATACTTGCAGCTCCGCTTCTACTTCTTCGTCTTCTTCGATCGGGAGGAATAGTGATCAGTCCGCTAGATCCTCCGACGGTGAGGATAGCGGCGAGAATGATGAGGTTCAGAGCTCCTATAAAGGGCCACTGGATATGATGGACTCCTTGGAGGAGGTTTTGCCTGTCAGAAAAGGCATCTCAAAGTTCTATAGTGGAAAATCAAAGTCTTTCACGAGTCTGGCCGATGCCTCCTCTGTTAACTCCATGAAGGAGATTGCGAAGCCAGAGAATGCCTATTCCAAGAAACGTAGGAATCTTATGGCGTATAATCTTGTGTGGGAGAAGAACCGGAGTTTTCCTCTCAAGAATAACGGTGGTGGGATATCAAAGAGACCCATCAGCTCAAGCAGAAGCTCCTTAGCTTTGGCTGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAGGATTCAAATTCTAGCTCATATTCAAGCTCTCCACCGCCTCGCCCACCTCTACACCCACAATCCAGACCATCTAACAGCAATTTCGCTTCCATGGTGCCACCTCAAAGAACTTTCTCCACTTGGCGTTCATATTCCTTGGCCGATTTACAAGAATGCGCCACCTTTGCTAATAAGGCCAACCTAACCAATCTGAACTGACCCGGAAAATTTACTTCTCTTGCATAGGTACGCAAGAGTACTTTTAACTATTCTAGGAACCCTGAAATAGGAGGTTTTTTCTAGTATGATTTTAGGACTTATGGTCGTTGCTGTACTCTATATATTAAAATCCAAAAACTTTCATGTCTCATTGTTTATAATGAAATGGGGATATGAAATTAAGAGCAAAGCTGAAGTAGCAGACTTGTGAGTCACATTTGTCAACACCTGTCTGTATTGGCCTAAAACAAGACACAACTATCTCAACTACCCACCCACACATAAACAGCCACCTTGAAGGTTAGTTTGACTGATGAAAACCACAACTTCCAAATTCCTTTTGGTTCACCAAGATTGAATATCTGGTTGGTTTAGTGCTTCTAAAAGCGTTCTTATGCTTTACAGAAACAAGCTGCTACAATTGACATAGACCTTCCACAATCCCATGTAATTGACTTTATAACTAAGTTGATTTGTTATGTTAAACTGCCCCTTATAGTCCTAACATTGGTTCCCCATATACTGTATGAGACACTCCCAGTAACATTTAAAGACATCTGCACGTTTTGACACATGTAGTTCATAGGATCTGGGCCCCTGGTATTTCATATTTTCCCATGAGCTTCATTTATGGTTGGATTTCACTACGGCTTCTTTCTTCTAGATCTTGAGAATGTAAGACATGCACTATGCTGCAATTTGCTCGTTGCTTAAGCATTTTGTAAGCATCATTCCCAATGACATTGATGAGTTTCTTTTCCTGCTTGCCTTTCAG ATGTCGATTACTTTGGATAGGGTTCGGCAGGTTGAAGATAAACGCTCTGGATTCTCGCCGGAGGATTTGGGCTATGGATCCGTCTTTCAGAGATTGGTGAATCAGGATGTGGATCGCACTGTTGAAGGGTTTGAAAAGGAGGAGGCTGACGAATCTAATACTTGCAGCTCCGCTTCTACTTCTTCGTCTTCTTCGATCGGGAGGAATAGTGATCAGTCCGCTAGATCCTCCGACGGTGAGGATAGCGGCGAGAATGATGAGGTTCAGAGCTCCTATAAAGGGCCACTGGATATGATGGACTCCTTGGAGGAGGTTTTGCCTGTCAGAAAAGGCATCTCAAAGTTCTATAGTGGAAAATCAAAGTCTTTCACGAGTCTGGCCGATGCCTCCTCTGTTAACTCCATGAAGGAGATTGCGAAGCCAGAGAATGCCTATTCCAAGAAACGTAGGAATCTTATGGCGTATAATCTTGTGTGGGAGAAGAACCGGAGTTTTCCTCTCAAGAATAACGGTGGTGGGATATCAAAGAGACCCATCAGCTCAAGCAGAAGCTCCTTAGCTTTGGCTGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAGGATTCAAATTCTAGCTCATATTCAAGCTCTCCACCGCCTCGCCCACCTCTACACCCACAATCCAGACCATCTAACAGCAATTTCGCTTCCATGGTGCCACCTCAAAGAACTTTCTCCACTTGGCGTTCATATTCCTTGGCCGATTTACAAGAATGCGCCACCTTTGCTAATAAGGCCAACCTAACCAATCTGAACTGA MSITLDRVRQVEDKRSGFSPEDLGYGSVFQRLVNQDVDRTVEGFEKEEADESNTCSSASTSSSSSIGRNSDQSARSSDGEDSGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGKSKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPISSSRSSLALAVAMSSSESNSSEDSNSSSYSSSPPPRPPLHPQSRPSNSNFASMVPPQRTFSTWRSYSLADLQECATFANKANLTNLN
BLAST of ClCG05G015790 vs. Swiss-Prot
Match: SRP40_YEAST (Suppressor protein SRP40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP40 PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 6.2e-07 Identity = 52/176 (29.55%), Postives = 72/176 (40.91%), Query Frame = 1
HSP 2 Score: 50.8 bits (120), Expect = 2.6e-05 Identity = 57/204 (27.94%), Postives = 84/204 (41.18%), Query Frame = 1
HSP 3 Score: 37.0 bits (84), Expect = 3.9e-01 Identity = 41/186 (22.04%), Postives = 71/186 (38.17%), Query Frame = 1
HSP 4 Score: 30.4 bits (67), Expect = 3.7e+01 Identity = 24/95 (25.26%), Postives = 38/95 (40.00%), Query Frame = 1
BLAST of ClCG05G015790 vs. Swiss-Prot
Match: VIT2_CHICK (Vitellogenin-2 OS=Gallus gallus GN=VTG2 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.9e-06 Identity = 49/189 (25.93%), Postives = 79/189 (41.80%), Query Frame = 1
HSP 2 Score: 42.7 bits (99), Expect = 7.1e-03 Identity = 42/166 (25.30%), Postives = 67/166 (40.36%), Query Frame = 1
HSP 3 Score: 39.3 bits (90), Expect = 7.9e-02 Identity = 47/174 (27.01%), Postives = 75/174 (43.10%), Query Frame = 1
HSP 4 Score: 34.3 bits (77), Expect = 2.5e+00 Identity = 21/86 (24.42%), Postives = 39/86 (45.35%), Query Frame = 1
HSP 5 Score: 33.9 bits (76), Expect = 3.3e+00 Identity = 34/155 (21.94%), Postives = 55/155 (35.48%), Query Frame = 1
BLAST of ClCG05G015790 vs. TrEMBL
Match: A0A0A0L451_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648530 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-135 Identity = 250/266 (93.98%), Postives = 256/266 (96.24%), Query Frame = 1
BLAST of ClCG05G015790 vs. TrEMBL
Match: A0A067KCS0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07592 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.1e-71 Identity = 143/214 (66.82%), Postives = 180/214 (84.11%), Query Frame = 1
BLAST of ClCG05G015790 vs. TrEMBL
Match: B9RQX8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0707610 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 1.3e-67 Identity = 134/219 (61.19%), Postives = 182/219 (83.11%), Query Frame = 1
BLAST of ClCG05G015790 vs. TrEMBL
Match: W9RF79_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018609 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 8.3e-67 Identity = 157/262 (59.92%), Postives = 186/262 (70.99%), Query Frame = 1
BLAST of ClCG05G015790 vs. TrEMBL
Match: B9IKE9_POPTR (MTD1 family protein OS=Populus trichocarpa GN=POPTR_0018s08410g PE=4 SV=2) HSP 1 Score: 261.9 bits (668), Expect = 8.3e-67 Identity = 148/260 (56.92%), Postives = 188/260 (72.31%), Query Frame = 1
BLAST of ClCG05G015790 vs. TAIR10
Match: AT5G21940.1 (AT5G21940.1 unknown protein) HSP 1 Score: 182.6 bits (462), Expect = 3.2e-46 Identity = 118/247 (47.77%), Postives = 157/247 (63.56%), Query Frame = 1
BLAST of ClCG05G015790 vs. TAIR10
Match: AT3G43850.1 (AT3G43850.1 unknown protein) HSP 1 Score: 122.5 bits (306), Expect = 4.0e-28 Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 1
BLAST of ClCG05G015790 vs. TAIR10
Match: AT2G24550.1 (AT2G24550.1 unknown protein) HSP 1 Score: 72.4 bits (176), Expect = 4.7e-13 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1
BLAST of ClCG05G015790 vs. TAIR10
Match: AT5G24890.1 (AT5G24890.1 unknown protein) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12 Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 1
BLAST of ClCG05G015790 vs. TAIR10
Match: AT5G56550.1 (AT5G56550.1 oxidative stress 3) HSP 1 Score: 66.2 bits (160), Expect = 3.4e-11 Identity = 46/155 (29.68%), Postives = 75/155 (48.39%), Query Frame = 1
BLAST of ClCG05G015790 vs. NCBI nr
Match: gi|449447177|ref|XP_004141345.1| (PREDICTED: vitellogenin-2-like [Cucumis sativus]) HSP 1 Score: 490.3 bits (1261), Expect = 2.1e-135 Identity = 250/266 (93.98%), Postives = 256/266 (96.24%), Query Frame = 1
BLAST of ClCG05G015790 vs. NCBI nr
Match: gi|659104048|ref|XP_008452790.1| (PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo]) HSP 1 Score: 486.9 bits (1252), Expect = 2.3e-134 Identity = 251/267 (94.01%), Postives = 257/267 (96.25%), Query Frame = 1
BLAST of ClCG05G015790 vs. NCBI nr
Match: gi|802629437|ref|XP_012077185.1| (PREDICTED: serine/arginine repetitive matrix protein 2-like [Jatropha curcas]) HSP 1 Score: 278.1 bits (710), Expect = 1.6e-71 Identity = 143/214 (66.82%), Postives = 180/214 (84.11%), Query Frame = 1
BLAST of ClCG05G015790 vs. NCBI nr
Match: gi|255550193|ref|XP_002516147.1| (PREDICTED: uncharacterized protein LOC8258594 [Ricinus communis]) HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67 Identity = 134/219 (61.19%), Postives = 182/219 (83.11%), Query Frame = 1
BLAST of ClCG05G015790 vs. NCBI nr
Match: gi|703105965|ref|XP_010098377.1| (hypothetical protein L484_018609 [Morus notabilis]) HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66 Identity = 157/262 (59.92%), Postives = 186/262 (70.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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