CmoCh01G013660 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G013660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TRNA-methyltransferase
Location	Cmo_Chr01 : 10755839 .. 10761546 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTACAAAAATTGAAGTGGCTATAAATGCACGATGGAAATTAATATTCCAAAAACCAAATTGAAAAACTGGAAAAATAAATAAATAAATAAATCAATTGTAGCCGCTAATTTATGGGGAAATTGTTCAAGCTCCGCTTCCAGTCCCAGTAATGGTGACCAGAAGCCATAGATTTTTCACTTGAAAACAACGAAATCATGGCCTCGAATCTCATTACTGCGTTTCATTGCCCGAATCCGTACCCTTCTTCTTCTTCTTACTCAAATCTGCAGCAGAATACATCGCTCCTTTTGAAGTTCCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCTGTTTCAGAGGGCGCTGAGGGTAGAGTTCAAGATGAAGAGCTTCTCATTTCGTCTTCTTCTGGTATGCATCAATTCACTGCTTCGTCTCTCTTTTCTTGTTGTTTAGTTGTTCCTTCAAAATTGTGAGTAGGTTGATTCTTGTCTGTGTAATCCTATAGTTTAAGGCCGCTTATAATGAAAGAATCCTATTCCTAGTACTCAACGCTTGAGATTTTAAATTGTTTTTGTGAAATCCAAGTGGTCTATCGCTATAAATATATTAAAGTAAAGATGATCTTGCTTTTTCTTGTTAAATACATTTGTGGTTTCTTTGCTTTGACATGGCCTGATTCCATTTCCAATTCAGTTCTTGTGGTTTCAAAATTTTCAATATCATTCATATTATAGTTCTTATTATTTGAGTAAAGGTTATCAAACATTTGTTGTGACCAATGAATAACAAAAACGCAATATAGAGAGCTATTTGTGGACAATATCCTCTGGTACTCCAAAACAACATTAGTCATAGCCATTTTTATAATTTTCAATCAAAATGATGCCTTAAGAGCCAACCAAAATTTATGTCTCAAGTCAATTTTATGCATCACACCAAAATAATCTATCATAGAGTTCATTTTCAATATCTATGAACAACTTGCCATATGGGATTTTTGTTACACTTCTGTATATGATAACCTTTAAGCAAATAATGACGACGAAATATGAAAGTTTTAGAAGTATAGAAATCAAATTGAAACTAGAGTTAAAGCGTTAGACTAAAAGTGTAGTTTAACGTACTCGGTTTAAAGATTAACCATTTTTCTTTTCACATGTAAAGGAGCATCTTCTTCTGCACGCACACAGCTTGATCTCTTGGAGCAACTCTCTTCCGGTAGCCAATTAGTTGATGGTAAGTGGGCTTATTTCATTGAAATGTACTAGTCTTATTTCATTGAAAAATGTCATATCTGAGAGATCCCACATCGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGGTGTGGAGACTTCTCCCTAGCAAACGCATTTTAAAAACCTTGAGGGAAGCCCGAAAGAGAAAGCCCAAAGATGATAATATCTGCTAGCGGTGAGCTTGGGTTGTTACAATTTCACTTGAACTTACTGAGATTTTATGTTCTCAGGTTATGAGAGTGATGGCAATTACCAGAGAACTACAATCCGTGATCAGCTTGCACAATTGTTCAGAGACAGAGACGACGATTTTAGCATTCCGTTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCACAGAAGAGGAACATCAAAAGACAAGAATACTTGAATGAAGTATCTCAAAGGAATGATTCAGTTTTCTTTGCTACAGTTGGAGCATTTGTAATTCTGCCACCTATTGTAATATTAGGTATTGCTATACTGACTGGTTATGTGCAACTTTTTCCATGATATGCTGTTTATACAAACATCATATATATATATAGAAGTGGTAATATCTTGATATCCTTAACCCCGTGTTCATAGTTTCTATTGTTCAATTTTTAGTTCTATATTTCTTGAAAAGTTACGACCGGCTGCTGTTTCATATATGATTTTACCGTTTAAGAATAAAAAACGTCAGAATTAGTCCCTGTGGTTTGATAAAACTTTACAAAACAGTCCCTATCTAGAAACTATTTATGGGGTTTTATCAAATCACAAGGACCAAAATAACTCCTTGCTTTTGTAACAGATCCGTTCTTGATTTCTAAGGAGACCCACTGTGGTGTGTGCTTAGTGACATTGGTGCGAGTCCCGACAAGGTGCGATTGTGACCCATAGGCCCAAGGTGCGACCTATGCACCTTGTTTCAAAGAAGTGAGACTCTTCTTTTGAGGCTCGTGCCGAGTTCTCAAGCCCAACTAAACACATTAACATTCCTAAAATCTCAAAAAACACTCAATTTTCTTAACCTTTACATTATAAAAAATTTATTTACATTCTTAAAAAAAACTGAAGCCCTAAAGGGCTATTGCACTTTAGTCAAGTGAGCCTCGAGCTTTGGAAAGCACGAGAGACGAGTGAAGAACAATAACATTCACTCTCCGTCTCTAACAAAATCTAGAAAATGAAACTTACAAATCCCAATAAGAAGAGAGAAATGATAAGAAGAGTGACAACAATCTCATGTTAGTGAAAACAACCTTTTGACAACTCTGTTTACTCCTTCAGCATGGATCAGTAGGCAGTTCCTTTTGCTTGTCATTTGGTGAGAGCCCTTGATCAGTAGGTGTTACCAAATCACTGCCCAAAATAACTCCTTGCTTTTGTATATACTCCAGTTTGTCTTGGAATAGGTAAAAGAAGGAAATCAAAGAAATTTCAACAGTGAAAATTATGGTCCAAATTCGTATCCTTCGTGACGTTTTCTCGTGGTAAGCAAATAATCCTGAGTATACATTGAAAACTCCTAGGAGAGATACTGCAGTGCCAAGCATCCAGTGTATGAAAAACCATAGGCTCCTTGTTCTAGAGCCCCTGCCAGAATATGAGAAAGGAATGGATTCAGAGTATACAAATTGAAACAAATCATACTATTCCTCTTTCCTGATCTAAATCCACTGAACACTACTTCCTTTGTTTTGTTATCTAAATCCACGGACAGGAATGAATTACGGGGTCCCACATCAGTTGGAGAGAGGAAATAAGTATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAATTGTGAGGCTGACGACGATATGTAACAAGGTATAGCAAACAATATCTGCTAGCGGTGAGTTTGGGCTGTTTCAATACTACTTTGAAAACAACCTCACAATAACTCTTTCTAATAAACTATTGCTGCATATTTGAAGAAAATATGAAACTTTACCTCTTTGGCCTTACAATTCCAATCAATGCCTGTAACCAGATCATCCCATATAGGCCAATCCCTATTCTTTGATGGTTATTATTGAAAGCATTGTTGAATTTCTTGATAGACATGACTGCTCCAGCTGTGACTAGTAATACAGAGAGTATCTGTTCATCATAATCAAGTTAAGATAATGTAATGAACCCATCTTTGTGATTAAAGGATCATCAAAATCCATCAAACTGCTACTATAAATTTGGAATTTTAACTATCTAATTAGTTAGAATGTGATGATGCCTGTCTTTTCTTTCGATGCAAGTATTCATAATATTCTGCTGGATCAACTTTTTGTGTTTAGAAACTTGGGGGCTGTATAAGATATTCAGAATCAGGGCCCTTGGGATTTCTCTTGAACCATCATTAAGCTCATAAAGTCAAGAAAAATGTGGATTGTTTGCTTGTTTAGTGAAAAGATAAAGCTAATTGCATTAATGATGATGCTTTCGTGCAACTCTATGTAGTTATTGTTTGTTTAGTTTAAAAGGATTCTTCTTTAAGAAAACAAACACCATAGAGTTTATTTTAGGCCCCATTTGATGATCAAAGGATTCACTATGGTTTTCACTTTCCTTAACGTAGAAACAATAGAATTCTTACCCAAATTTAAAAAACGAAAGCAAGTTTTTTCAGAATCTTTTAGTTTTTGAATAAAGAAAGAAACATTTAGGTGGAAGTAATGTGTGAGATCCCATGTCGGTTGGGGAGGAAACGAAACATTCTTTACAAGGGTGTGGAAACCCCTCCCTAGCAGACACGTTTTAGAAACCTTGAGGGGAAGCTTGAAAGAGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGACAGTTATAAATGGTATAAGAGCCAGACACCGGAGGATTTGTCAGTGAGGAGGCTAATCCCTAAAGGGGGGTGGACACGAGGCGGTGTGCCAACGTCCTTAGGAGTGGATTGGGGGTCCCACATCGATTAGAGAAGAAAACGAGTACCAATGAGAATGTCGGGCCCCAAATGGGGGGTGGATTGTGAGATTCCACATCGGTCGGGAAGGAAACGAAACATTATTTATAAGAGTGCGGAAACCTCTCCCTAACAGGCACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATCTACTAATTGTGGACTTGGGCAATTACAAATAGTATTAGAACCAGACACCAAGCATTGTGTTAGCAAGGAAACTGATCCCCTAAGGGGGTGGACACGAGGCTGTGCCAGCAAGGACAATGGGCCCCGAAAGAGGGGTGGATTGGGAGGGTCCCACATCGATTGAAGAAGGGAACGAGTGCCAGCGAGGACGTTGGGCCCTGAAGCGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGAAAACAAAATATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAACCTTGAGGGAAAGCTCGAAAGGGAAAGCCTAAAGAGGACAATATCTACTAGCGGTGGGCTTGAGCCGTTATATAACTTTCAAAAACCAAAATAGTTATCGAACGGAATTTCATTATTGCTAGAGAAGATTGAGATGAACAAGAGATGAACTTGCCTGTAGAATTGTGTGAATGTAAAAGTAAAACTTCAGCCTTCTTCCACATTGCTCTCTGTTGGACATTCTGATAACTAGAATCCCAACCGGCATAAGGAACCCCATTGAAGCCCATAGAAGAAATCCATGGAGTGTGATATCAAATAGTAAGCTGGAACTAATCTGCTGCCATTATTAACCAATAATCACTTTCAGCTATACATTCTAAACCTTCTTTTTCTGCAATGATATTCATTTCAAATATGAAAATGAAACAATAGGAAGAACAATAAGAAACCTTCTGGCTGTGATCTTTCTTGCTTGTATTGAATTCCACATTTTTCTTGAGCTGTTGGGATGAACTGAGTGGTTGAAATGTGAGAAGAAGAAGGAGAAAAAGAATGGAGAAAGAGGACTTTTTGTTCTGTAAAAATAGCATTGTTTATTTGCTTATGATGAAACAGGCACCAAGCACAATGCAGAACCCACTCTTGAAAGCTGCTTACTTGGTTGCTATGGATTTCACAAGGGGTCTTCAAAGCTTTTGTAGCAACGAGGTAAAAGGAAAAGGCTGGACAATGTCAGAGGAGGGGAGCAATAAAGGGTTGTGATCAATAATGCCTAAAGAGGACGCTCAACTAAGGTACTTGATTTTTCTCTAGAAATACATCTGCCTTGTGTTGGATGTTGATCTAAAAATATGTCGGTCTCTAATGACCATTAGATACAAAAACAGATTACTTTTACAATTTCTGTCTCACATATCATCTGTCTGTGCAAAATTATCGTAACGGCTTATCATCTATCTGTGCAAAATTATCGTAACGGCCCAAGCACACTGCTAGTAGATATTGTACTCTTTGTGCTTTTTCTTTCG

mRNA sequence

CAAATTACAAAAATTGAAGTGGCTATAAATGCACGATGGAAATTAATATTCCAAAAACCAAATTGAAAAACTGGAAAAATAAATAAATAAATAAATCAATTGTAGCCGCTAATTTATGGGGAAATTGTTCAAGCTCCGCTTCCAGTCCCAGTAATGGTGACCAGAAGCCATAGATTTTTCACTTGAAAACAACGAAATCATGGCCTCGAATCTCATTACTGCGTTTCATTGCCCGAATCCGTACCCTTCTTCTTCTTCTTACTCAAATCTGCAGCAGAATACATCGCTCCTTTTGAAGTTCCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCTGTTTCAGAGGGCGCTGAGGGTAGAGTTCAAGATGAAGAGCTTCTCATTTCGTCTTCTTCTGGAGCATCTTCTTCTGCACGCACACAGCTTGATCTCTTGGAGCAACTCTCTTCCGGTAGCCAATTAGTTGATGGTTATGAGAGTGATGGCAATTACCAGAGAACTACAATCCGTGATCAGCTTGCACAATTGTTCAGAGACAGAGACGACGATTTTAGCATTCCGTTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCACAGAAGAGGAACATCAAAAGACAAGAATACTTGAATGAAGTATCTCAAAGGAATGATTCAGTTTTCTTTGCTACAGTTGGAGCATTTGTAATTCTGCCACCTATTGTAATATTAGGCACCAAGCACAATGCAGAACCCACTCTTGAAAGCTGCTTACTTGGTTGCTATGGATTTCACAAGGGGTCTTCAAAGCTTTTGTAGCAACGAGGTAAAAGGAAAAGGCTGGACAATGTCAGAGGAGGGGAGCAATAAAGGGTTGTGATCAATAATGCCTAAAGAGGACGCTCAACTAAGGTACTTGATTTTTCTCTAGAAATACATCTGCCTTGTGTTGGATGTTGATCTAAAAATATGTCGGTCTCTAATGACCATTAGATACAAAAACAGATTACTTTTACAATTTCTGTCTCACATATCATCTGTCTGTGCAAAATTATCGTAACGGCTTATCATCTATCTGTGCAAAATTATCGTAACGGCCCAAGCACACTGCTAGTAGATATTGTACTCTTTGTGCTTTTTCTTTCG

Coding sequence (CDS)

ATGGCCTCGAATCTCATTACTGCGTTTCATTGCCCGAATCCGTACCCTTCTTCTTCTTCTTACTCAAATCTGCAGCAGAATACATCGCTCCTTTTGAAGTTCCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCTGTTTCAGAGGGCGCTGAGGGTAGAGTTCAAGATGAAGAGCTTCTCATTTCGTCTTCTTCTGGAGCATCTTCTTCTGCACGCACACAGCTTGATCTCTTGGAGCAACTCTCTTCCGGTAGCCAATTAGTTGATGGTTATGAGAGTGATGGCAATTACCAGAGAACTACAATCCGTGATCAGCTTGCACAATTGTTCAGAGACAGAGACGACGATTTTAGCATTCCGTTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCACAGAAGAGGAACATCAAAAGACAAGAATACTTGAATGAAGTATCTCAAAGGAATGATTCAGTTTTCTTTGCTACAGTTGGAGCATTTGTAATTCTGCCACCTATTGTAATATTAGGCACCAAGCACAATGCAGAACCCACTCTTGAAAGCTGCTTACTTGGTTGCTATGGATTTCACAAGGGGTCTTCAAAGCTTTTGTAG

Homology

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BLAST of CmoCh01G013660 vs. TrEMBL
Match: A0A0A0L2V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608080 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.5e-73
Identity = 153/178 (85.96%), Postives = 160/178 (89.89%), Query Frame = 1


Query: 1   MASNLITAFHCPNPY--PSSSSYSNLQQNTSLLLKFHSRCSSSSRKFAVSEGAEGRVQDE 60
           MASN I  FHC NP+   SSSS SNL  N SL  KFHSRCSSSSRKFAVSE AEGRV +E
Sbjct: 1   MASNFIIGFHCSNPHFSSSSSSSSNLLHNKSLPFKFHSRCSSSSRKFAVSESAEGRVNEE 60

Query: 61  ELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQRTTIRDQLAQLFRDRDDDF 120
           E LISSSSG+SSSARTQLDLLEQLSSGSQLVDGYESDG+Y +TTIRDQLAQLFRDRDDDF
Sbjct: 61  EFLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYGKTTIRDQLAQLFRDRDDDF 120

Query: 121 SIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILG 177
           ++PLGKNLKKVSAKFLTISQKRNIKRQ YLNEVSQRNDSVFFATVGAFVILPPIVILG
Sbjct: 121 TVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILG 178

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BLAST of CmoCh01G013660 vs. TrEMBL
Match: W9SD73_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026761 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-42
Identity = 115/180 (63.89%), Postives = 128/180 (71.11%), Query Frame = 1


Query: 1   MASNLITAFHCPNPYPSSSSYSNLQ-QNTSLLLKFHSRCSSSS--RKFAVSEGAEGRVQD 60
           MA N      CPN Y SSSS           L K  S  SSSS  +  A SEG E  V++
Sbjct: 1   MALNFRATSLCPNSYSSSSSPPPFVIPKHKQLFKSSSPSSSSSSFKTLAQSEGTERVVKE 60

Query: 61  EELLISSSSGASSSARTQLDLLEQLSS-GSQLVDGYESDGNYQRTTIRDQLAQLFRDRDD 120
           ++   S S   SSSAR QLDLLEQLSS  S   DGYES+G+ ++ TIRDQLAQL  DRD 
Sbjct: 61  QDPPASFSG--SSSARAQLDLLEQLSSTSSSSADGYESEGSSRKLTIRDQLAQLVADRDG 120

Query: 121 DFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILG 177
           DFS+PLGKNLKKVSAKFLTISQKRNI+RQ YLN+VSQRNDSVFFATVGAFVILPP+VILG
Sbjct: 121 DFSLPLGKNLKKVSAKFLTISQKRNIRRQAYLNQVSQRNDSVFFATVGAFVILPPLVILG 178

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BLAST of CmoCh01G013660 vs. TrEMBL
Match: V4SRD9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032884mg PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.2e-42
Identity = 102/150 (68.00%), Postives = 123/150 (82.00%), Query Frame = 1


Query: 31  LLKFHSRCSSSSRKFAVSE--GAEGR--VQDEELLISSSSGASSSARTQLDLLEQLSSGS 90
           L K  S+ ++S + FA S+  GAEG   V +E+   +S SG+SSSA+TQLDLLEQL+S S
Sbjct: 19  LFKLQSQ-TTSCKTFAQSQRIGAEGGGGVTEEDPPAASLSGSSSSAQTQLDLLEQLTSTS 78

Query: 91  QLVDGYESDGNYQRTTIRDQLAQLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQE 150
             ++GYESDG+ ++ TIRDQLAQL  DRDD+FSIPLGKNLKKVS KFLTISQKRNI+RQ 
Sbjct: 79  SSLEGYESDGSSRKLTIRDQLAQLIGDRDDEFSIPLGKNLKKVSEKFLTISQKRNIRRQA 138

Query: 151 YLNEVSQRNDSVFFATVGAFVILPPIVILG 177
           YLN+VSQRNDSVFFAT+GAFVILPP +ILG
Sbjct: 139 YLNKVSQRNDSVFFATIGAFVILPPFIILG 167

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BLAST of CmoCh01G013660 vs. TrEMBL
Match: M1BGE7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017304 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 101/142 (71.13%), Postives = 112/142 (78.87%), Query Frame = 1


Query: 35  HSRCSSSSRKFAVSEGAEGRVQDEELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYES 94
           H    SS R+ A+SE  +GRV  EE L  + SG+ SSARTQLDLLEQL+S S  V+GYES
Sbjct: 20  HKLYYSSIRRAALSEQGDGRVTKEEDL-PTYSGSLSSARTQLDLLEQLTSSSSAVNGYES 79

Query: 95  DGNYQRTTIRDQLAQLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQR 154
           D +  + TIRDQLA L   RDDDFSIPLGKNLKK SAKFLT SQKRNIKRQ YLNEVSQR
Sbjct: 80  DSSSGKPTIRDQLANLVGSRDDDFSIPLGKNLKKFSAKFLTTSQKRNIKRQAYLNEVSQR 139

Query: 155 NDSVFFATVGAFVILPPIVILG 177
           NDS FFAT+GAFVILPP+VILG
Sbjct: 140 NDSTFFATIGAFVILPPLVILG 160

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BLAST of CmoCh01G013660 vs. TrEMBL
Match: A0A0V0GQ07_SOLCH (Putative vitellogenin-1-like (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 101/142 (71.13%), Postives = 112/142 (78.87%), Query Frame = 1


Query: 35  HSRCSSSSRKFAVSEGAEGRVQDEELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYES 94
           H    SS R+ A+SE  +GRV  EE L  + SG+ SSARTQLDLLEQL+S S  V+GYES
Sbjct: 18  HKLYYSSIRRAALSEQGDGRVTKEEDL-PTYSGSLSSARTQLDLLEQLTSSSSAVNGYES 77

Query: 95  DGNYQRTTIRDQLAQLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQR 154
           D +  + TIRDQLA L   RDDDFSIPLGKNLKK SAKFLT SQKRNIKRQ YLNEVSQR
Sbjct: 78  DSSSGKPTIRDQLANLVGSRDDDFSIPLGKNLKKFSAKFLTTSQKRNIKRQAYLNEVSQR 137

Query: 155 NDSVFFATVGAFVILPPIVILG 177
           NDS FFAT+GAFVILPP+VILG
Sbjct: 138 NDSTFFATIGAFVILPPLVILG 158

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BLAST of CmoCh01G013660 vs. TAIR10
Match: AT2G42975.1 (AT2G42975.1 unknown protein)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-40
Identity = 110/180 (61.11%), Postives = 121/180 (67.22%), Query Frame = 1


Query: 1   MASNLITAFHCPNPYPSSSSYSNLQQNTSLLLKFHS----RCSSSSRKFAVSEGAEGRVQ 60
           MA N  +    P   PSSSS S  +Q+  LLL+  S    R  S   +  V++       
Sbjct: 1   MALNFFSTSLHPISNPSSSSRS--KQSHHLLLQLSSPPATRVRSERSEIGVTDDNNNN-N 60

Query: 61  DEELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQR-TTIRDQLAQLFRDRD 120
           D      S S +SSS RTQLDLLEQL+S S   DGY SDG   R  TIRDQLA L  DRD
Sbjct: 61  DTSSSSFSGSSSSSSVRTQLDLLEQLTSTS---DGYLSDGGGSRGLTIRDQLAGLVGDRD 120

Query: 121 DDFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVIL 176
           DDFSIPLGKNLKKVS KFLTISQKRNIKRQ YLNEVSQRNDSVFFAT+GAFVILPP+VIL
Sbjct: 121 DDFSIPLGKNLKKVSPKFLTISQKRNIKRQSYLNEVSQRNDSVFFATIGAFVILPPLVIL 174

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BLAST of CmoCh01G013660 vs. NCBI nr
Match: gi|778695333|ref|XP_004144634.2| (PREDICTED: uncharacterized protein LOC101216249 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 5.0e-73
Identity = 153/178 (85.96%), Postives = 160/178 (89.89%), Query Frame = 1


Query: 1   MASNLITAFHCPNPY--PSSSSYSNLQQNTSLLLKFHSRCSSSSRKFAVSEGAEGRVQDE 60
           MASN I  FHC NP+   SSSS SNL  N SL  KFHSRCSSSSRKFAVSE AEGRV +E
Sbjct: 1   MASNFIIGFHCSNPHFSSSSSSSSNLLHNKSLPFKFHSRCSSSSRKFAVSESAEGRVNEE 60

Query: 61  ELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQRTTIRDQLAQLFRDRDDDF 120
           E LISSSSG+SSSARTQLDLLEQLSSGSQLVDGYESDG+Y +TTIRDQLAQLFRDRDDDF
Sbjct: 61  EFLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYGKTTIRDQLAQLFRDRDDDF 120

Query: 121 SIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILG 177
           ++PLGKNLKKVSAKFLTISQKRNIKRQ YLNEVSQRNDSVFFATVGAFVILPPIVILG
Sbjct: 121 TVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILG 178

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BLAST of CmoCh01G013660 vs. NCBI nr
Match: gi|659130963|ref|XP_008465443.1| (PREDICTED: vitellogenin-1 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 1.5e-72
Identity = 154/178 (86.52%), Postives = 160/178 (89.89%), Query Frame = 1


Query: 1   MASNLITAFHCPNP--YPSSSSYSNLQQNTSLLLKFHSRCSSSSRKFAVSEGAEGRVQDE 60
           MASN I  FHC NP    SSSS SNL  + SL LKFHSRCSSSSRKFAVSE AEGRV +E
Sbjct: 1   MASNFIIGFHCSNPPFSSSSSSSSNLLLSKSLPLKFHSRCSSSSRKFAVSESAEGRVNEE 60

Query: 61  ELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQRTTIRDQLAQLFRDRDDDF 120
           E LISSSSG+SSSARTQLDLLEQLSSGSQLVDGYESDG+Y +TTIRDQLAQLFRDRDDDF
Sbjct: 61  EFLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYGKTTIRDQLAQLFRDRDDDF 120

Query: 121 SIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILG 177
           S+PLGKNLKKVSAKFLTISQKRNIKRQ YLNEVSQRNDSVFFATVGAFVILPPIVILG
Sbjct: 121 SVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILG 178

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BLAST of CmoCh01G013660 vs. NCBI nr
Match: gi|747100050|ref|XP_011098096.1| (PREDICTED: uncharacterized protein LOC105176857 [Sesamum indicum])

HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44
Identity = 113/176 (64.20%), Postives = 131/176 (74.43%), Query Frame = 1


Query: 1   MASNLITAFHCPNPYPSSSSYSNLQQNTSLLLKFHSRCSSSSRKFAVSEGAEGRVQDEEL 60
           MA NL TA    +P P  SS  +  +N    LK  +   S  +  A+SEG E RV +E+ 
Sbjct: 1   MALNLGTASTALHPRPLISSKISKHRNA---LKLETPSPSCLKTAALSEGTESRVTEEDP 60

Query: 61  LISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQRTTIRDQLAQLFRDRDDDFSI 120
              + SG+SSSAR QLDLLEQL+SGS   DGYESDG Y R TIR+QLA L  DRDDDFSI
Sbjct: 61  --PTYSGSSSSARMQLDLLEQLTSGSSSDDGYESDGTY-RPTIREQLANLVPDRDDDFSI 120

Query: 121 PLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILG 177
           PLGKNLKKV+AKFLTISQKRNI+RQ YLNEVS+RNDSVFFAT+GAFV+LPP+VILG
Sbjct: 121 PLGKNLKKVTAKFLTISQKRNIRRQAYLNEVSKRNDSVFFATIGAFVLLPPLVILG 170

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BLAST of CmoCh01G013660 vs. NCBI nr
Match: gi|697111979|ref|XP_009609863.1| (PREDICTED: uncharacterized protein LOC104103652, partial [Nicotiana tomentosiformis])

HSP 1 Score: 184.9 bits (468), Expect = 1.4e-43
Identity = 102/146 (69.86%), Postives = 119/146 (81.51%), Query Frame = 1


Query: 31  LLKFHSRCSSSSRKFAVSEGAEGRVQDEELLISSSSGASSSARTQLDLLEQLSSGSQLVD 90
           L  + +  +SS R+ A+SE  +GR  +EEL   + SG+ SSARTQLDLLEQL+S S  V+
Sbjct: 30  LFSYQAWSASSLRRAALSEEGDGRFTEEEL--PTYSGSLSSARTQLDLLEQLTSSSSAVN 89

Query: 91  GYESDGNYQRTTIRDQLAQLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNE 150
           GYESD +  + TIR QLA+L  DRDDDFSIPLGKNLKKVSAKFLT+SQKRNIKRQ YLNE
Sbjct: 90  GYESDSSSSKPTIRAQLAKLVGDRDDDFSIPLGKNLKKVSAKFLTVSQKRNIKRQAYLNE 149

Query: 151 VSQRNDSVFFATVGAFVILPPIVILG 177
           VSQRNDSVFFAT+GAFVILPP+VILG
Sbjct: 150 VSQRNDSVFFATIGAFVILPPLVILG 173

[Close]

BLAST of CmoCh01G013660 vs. NCBI nr
Match: gi|698486942|ref|XP_009790166.1| (PREDICTED: uncharacterized protein LOC104237674 [Nicotiana sylvestris])

HSP 1 Score: 183.3 bits (464), Expect = 4.1e-43
Identity = 101/138 (73.19%), Postives = 116/138 (84.06%), Query Frame = 1


Query: 39  SSSSRKFAVSEGAEGRVQDEELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNY 98
           SSS R+ A+SE  +G V +EEL   + SG+ SSARTQLDLL+QL+S S  V+GYESD + 
Sbjct: 38  SSSLRRAALSEERDGNVTEEEL--PTYSGSLSSARTQLDLLDQLTSSSSAVNGYESDSSS 97

Query: 99  QRTTIRDQLAQLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSV 158
            + TIR QLA+L  DRDDDFSIPLGKNLKKVSAKFLT+SQKRNIKRQ YLNEVSQRNDSV
Sbjct: 98  SKPTIRAQLAKLVGDRDDDFSIPLGKNLKKVSAKFLTVSQKRNIKRQAYLNEVSQRNDSV 157

Query: 159 FFATVGAFVILPPIVILG 177
           FFAT+GAFVILPP+VILG
Sbjct: 158 FFATIGAFVILPPLVILG 173

The following BLAST results are available for this feature:

BLAST of CmoCh01G013660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G013660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2V6_CUCSA	3.5e-73	85.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608080 PE=4 SV=1	[more]
W9SD73_9ROSA	1.9e-42	63.89	Uncharacterized protein OS=Morus notabilis GN=L484_026761 PE=4 SV=1	[more]
V4SRD9_9ROSI	9.2e-42	68.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032884mg PE=4 SV=1	[more]
M1BGE7_SOLTU	1.2e-41	71.13	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017304 PE=4 SV=1	[more]
A0A0V0GQ07_SOLCH	1.2e-41	71.13	Putative vitellogenin-1-like (Fragment) OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of CmoCh01G013660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42975.1	2.0e-40	61.11	unknown protein	[more]

BLAST of CmoCh01G013660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695333\|ref\|XP_004144634.2\|	5.0e-73	85.96	PREDICTED: uncharacterized protein LOC101216249 [Cucumis sativus]	[more]
gi\|659130963\|ref\|XP_008465443.1\|	1.5e-72	86.52	PREDICTED: vitellogenin-1 [Cucumis melo]	[more]
gi\|747100050\|ref\|XP_011098096.1\|	2.9e-44	64.20	PREDICTED: uncharacterized protein LOC105176857 [Sesamum indicum]	[more]
gi\|697111979\|ref\|XP_009609863.1\|	1.4e-43	69.86	PREDICTED: uncharacterized protein LOC104103652, partial [Nicotiana tomentosifor...	[more]
gi\|698486942\|ref\|XP_009790166.1\|	4.1e-43	73.19	PREDICTED: uncharacterized protein LOC104237674 [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G013660.1	CmoCh01G013660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36742	FAMILY NOT NAMED	coord: 1..176 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G013660	Cucsa.058880	Cucumber (Gy14) v1	cgycmoB0074
CmoCh01G013660	CmaCh01G013090	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G013660	Cla023232	Watermelon (97103) v1	cmowmB453
CmoCh01G013660	Csa4G608080	Cucumber (Chinese Long) v2	cmocuB455
CmoCh01G013660	MELO3C026968	Melon (DHL92) v3.5.1	cmomeB423
CmoCh01G013660	ClCG11G016470	Watermelon (Charleston Gray)	cmowcgB387
CmoCh01G013660	CSPI04G21590	Wild cucumber (PI 183967)	cmocpiB459
CmoCh01G013660	Lsi04G018820	Bottle gourd (USVL1VR-Ls)	cmolsiB415
CmoCh01G013660	Cp4.1LG02g02480	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G013660	MELO3C026968.2	Melon (DHL92) v3.6.1	cmomedB487
CmoCh01G013660	CsaV3_4G031920	Cucumber (Chinese Long) v3	cmocucB0543
CmoCh01G013660	Cla97C11G222390	Watermelon (97103) v2	cmowmbB430
CmoCh01G013660	Bhi09G003012	Wax gourd	cmowgoB0620
CmoCh01G013660	CsGy4G020110	Cucumber (Gy14) v2	cgybcmoB477
CmoCh01G013660	Carg14783	Silver-seed gourd	carcmoB0430

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G013660	Cucurbita maxima (Rimu)	cmacmoB051
CmoCh01G013660	Cucurbita maxima (Rimu)	cmacmoB041
CmoCh01G013660	Melon (DHL92) v3.5.1	cmomeB439
CmoCh01G013660	Cucurbita pepo (Zucchini)	cmocpeB461
CmoCh01G013660	Cucurbita pepo (Zucchini)	cmocpeB469
CmoCh01G013660	Melon (DHL92) v3.6.1	cmomedB503
CmoCh01G013660	Silver-seed gourd	carcmoB1401
CmoCh01G013660	Cucurbita moschata (Rifu)	cmocmoB013
CmoCh01G013660	Cucurbita moschata (Rifu)	cmocmoB022