CmoCh01G010230 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G010230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Type II superfamily restriction endonuclease
Location	Cmo_Chr01 : 7978232 .. 7982408 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTCGGCAATGGAGTGAAATCCTGTGCAAAGCTGGTGAAGTCTTCAGAACCATTGTTGTTGAAATCAGGTTTCGTTACCTTGTTAGCCATGATGCAGATTTACTTTAACTTATGTTTTACAATTCCTGCATATGCTTGTTAGTTGCAACCATCTTTCTCAAATTCATAAGAGTGTAGTTATAGCATACTCTGACATGATTGCAAATAAGGAAACAAGCAAACCATTAATTAAAAATAAGTGATGTGAAAGAAATTGCACAACAATGACAGTAATAAAAAAGAATTATTGAAGCACTGAACATCGCCGGAGTTCTATGCATGGGAGAAGATTAAAGCATCGAACACCATGGAGTTCAAAGAAAATAAATCTGAAAAAGATAACAAGTTCCTAGGAACAAGTATTTATGGATAGCTCTGCTAAAATGGCTAAGTAAGACCTTCAGCAGGTTGTGATATAGGCTTTTTTTGCCTATTATTACTTGGGCCTTCCTCTTGGTAACGTTCCTATAAGTTTTTTGTTTTTGAGATCTAGTTGTGGAAAAGGTCAAAAAATGCTTCTCCTCATGGAAGTGGAGTTTTTTTTTCCTTCTTTCTAACGGAAGTAGACAAACTTTATCTGGTTTGTTTTTAGTGGAATCTCAACTTTCTTGCTCCATTTGTTTAGGGTTCTCGTTTTGTTCAACAAGAGATTAGAAAAGCTTATAAGTGACTTCTTACGAGAAGGGGTTGATGAGGTTCGAACATTGATTTAGTCAAGTGGGAGGTTGTGGCCAAGCTGTTCGATCTTGGGCATTTAGATATTGGTAATTTGAGGGATCAAAACGAAGTCTTGTTGGTTAAATGGTTGTGGTGCTTTCCTTGGGGGACTGCACCTTGTGGCCTATGACTATTGTGATACTGTATACGAAGTCTTGTTGATGTTTACTTCCCCTGAAAATCATGGATAGAACAAATTTCTAATTTTCTAGTCAATGAAGGATACTGTATTCTTTCATATTGGTATATTTTTTTAAAATGTATATTTTAGTAAACGTGTCCTTGCTGCATCTCTGTCCTAGTATTTTAGAAGGCGATGATTCATCGACAATAGTCTGTTCAGCTCTACTAATTCATAGGGTTCATATATATATATATATATATGAATCGAGGTTTTTAAATCCTAAAAATGATGGTTTTGTGGCACAGCTAATCGAGGGCTTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCACATGGACACGATGAACCCTACTATTTGCACGCAAAGCACATGTACAACTTGGATAGGATGAAAAATCAGAAGTTGAGCATGAGGCTTGGAGTTTTCACTGCATTCAGCATAGGTGTGGGCGTTCCAATCTATGCAGTGATGTTTCAGCAAAAGAAGACGGCCTCTGGATGATATTCTTCACTCAAACAATGTGTGCAATCCAATAAGAAACGTCGGTTGCACCTCAGTCAGTCCTCTCCTCTCCTTGGTTTTATTAACTCTGTATAAACCCTCATTTCAAATGCTGCATACAAACTCAGAAAGTCGATTCTGTTTTTCCCAATAAGTGTTTTCATCAGAATTCCCCATTATATTCCACATTTTGATCCAATCTGTTTTACTACCCAAAGATTTTTATTGTTTGGGTTCATTCATTCATTCCTTCCCTGCATTTTTATTTAGTTTTCCCCTAACCATTTTCTTTATATCCGTGTTGTATGGTTGGAGGAAATGATAACCTTGTAGATTTTCTAAGCTAATTTATCTCTCCCATTTGTTTTACAAATGTTTCATTTATTTCAACTTATATATTTTAAGATATTATCACCCTTTAGAGGAAGTAGAGGTATTGTTGTTTGATAAGAAAGAAAAATAAAAAAATGGGAACGGTGATTGGATTGATGATAAAATAGAATATTGGATCTCGAACAGTAATTCGATTGATATAAAAAAAAGAGAATTCTTGGTTCAATTGATCAAATTCTATTGAGTCCGATTGATGATAAAAAAAAGAGAATTCTTGGTTCAGTTCTCCACTTAACGACAGAAAAAAGGAGGTTCAGTTCTCCACTTAACAACAGAAAAAAGGATTGATCAAATTCTATTGAATCTGACTTACAGTGATCATTTATCAACGAATGATTCTGGTACTTACCGTGATCATTTATCAAAGAATGATTTTGGTTATCAAATGATTGAACAACCAGGTAAATTACCAGGAATAATTTACTTTTAGGAGAAAGACGGACATTCCTTGCTCATTATCAGACAATCACTTATTCACAAACCTCGTTCCTTGCTCATTATCAGACAATCACTTATTCACAAACCTCGTGTGGGGCTAATAGTTTGAATTTTCCATCTCATGGAAAACCCTTTTCGCTCGGATTGAACTTGTTCATAGTTTGAATTTCCCATCTTATGGAAAACCCTTTTCGCTCGGATTGAACTTGTTCATGTTGTGAGAGCGATCTTGAAGATAGGTGACTCAAAAGTTAGTGTCTATACCAATACCACAACAAGGTACACCTCCTTTTTCGATGCATAACCATTATATATTGAGTTACTTTTTGAGAATTTTTCTAAGAAGCATGTGAGTGAATACAACAAAACATGTAAAAAGGATCAGTAAGAAGGATCAGGGCTAGAAACGAAACTAAGCAGAAACTAAGCAGAGCATTACATAAAAAAAATAAAACATGTAGAAAGAATCCGTGCTAGAACCGAAAGTAAGGATTAAAATTTTATTTTTTTGATTAATCAATAATCTAATTTTATCTTCCCATACACACGGCATTGAGACATGATTCACCATCGTTCCTTATTTTAAAATTTAAAATTTAAAATTTATGTGAAATATTTTAAAAAAAATTAAATTAATTGATAATTTAATTTTAGAATTGAACTAAATTTAAATTCTTTTTTATATTAAAAAATATGGAAAGATGGAGAATTCAAATAACATATTTTAATAAATATTATTTGAATGCTGAATTTTGTAGAAAAAAGAACGCGTGTTGGCACCTAATTACCATTTGGCTCAACACGATGAGTAGGGTTTTATTCTACAAATTGAAACACAGCAAAGCCGGAGCAACAGATTTTCTCCCGCCACGACCGCCCTCCTTCCGCAACAATCTTCTTCTTCTTCTTCTTCTTCATTCCGGTTAGGCTTCTCATTTATGCTTTCAACTCTTCTGCTTAATTGTGTTATTCAGCCTTTACCTCCATCTGAATTGAGGCTTTCATAGTTTCTTTTGGTTGGTTTGATTTCAGAAACCGTCGATGTTCAATTGCAAAAACATATTTGCACGTACTCAAACTATTAGGAACTGGTCTAGATGCAATTTCAATTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAAATTCGAAACCGGAAATTATTATTCTGTTCTTCAGTCCTCTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAATTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCTATTGGGTTTTGGCCTCGTCGAAGGGCACAGTTGTGGTTAGAGAAACTTGGGGCAATTGACCAGTTTTCTGGTAATCTTGCAACTTGTTGGAGTAACATGAAAGAAGAAGAGGCTCTTGAGCGATATAAGCTGATTACAGGGAACTCTGTTTTGTTTCCTGAGTTTCAAGTCTATGAGAAAGGAAACTCTGAATATGATTGGTTAGCTGCTTCACCTGATGGTGCAATTGACAAGATGGTCTATGGATTGCCCTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTGATGGTGATATGGCAAAGGCTTCACCATGGTCTCGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGATTTTTATGTTTGGACTCCTAAAGGTAGTAGTTTGTTTAGATTGTACCGAGATGCCGAATATTGGGAGGTTTTGAAAATTGCTTTGTCCGATTTTTGGTGGAAGCATGTTCAACCAGCAAGGGAGATGTGTAGTAAATATTCCATTACAAATCCCCTCATTGAGCTGAAGTCTCTTAGGCCATCACCCAAGCATGAGTTGTGCAGTTATATAGTTTGTGAAAGCAAACGGGTTGTTGATAATTCTGAGTTGCTCTTGCGTGAATTTAATGGAAGACTTCAAACCTGA

mRNA sequence

ATGTCCTTCGGCAATGGAGTGAAATCCTGTGCAAAGCTGGTGAAGTCTTCAGAACCATTGTTGTTGAAATCAGCTAATCGAGGGCTTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCACATGGACACGATGAACCCTACTATTTGCACGCAAAGCACATGTACAACTTGGATAGGATGAAAAATCAGAAGTTGAGCATGAGGCTTGGAGTTTTCACTGCATTCAGCATAGTGATCATTTATCAACGAATGATTCTGAAACCGTCGATGTTCAATTGCAAAAACATATTTGCACGTACTCAAACTATTAGGAACTGGTCTAGATGCAATTTCAATTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAAATTCGAAACCGGAAATTATTATTCTGTTCTTCAGTCCTCTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAATTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCTATTGGGTTTTGGCCTCGTCGAAGGGCACAGTTGTGGTTAGAGAAACTTGGGGCAATTGACCAGTTTTCTGGTAATCTTGCAACTTGTTGGAGTAACATGAAAGAAGAAGAGGCTCTTGAGCGATATAAGCTGATTACAGGGAACTCTGTTTTGTTTCCTGAGTTTCAAGTCTATGAGAAAGGAAACTCTGAATATGATTGGTTAGCTGCTTCACCTGATGGTGCAATTGACAAGATGGTCTATGGATTGCCCTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTGATGGTGATATGGCAAAGGCTTCACCATGGTCTCGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGATTTTTATGTTTGGACTCCTAAAGGTAGTAGTTTGTTTAGATTGTACCGAGATGCCGAATATTGGGAGGTTTTGAAAATTGCTTTGTCCGATTTTTGGTGGAAGCATGTTCAACCAGCAAGGGAGATGTGTAGTAAATATTCCATTACAAATCCCCTCATTGAGCTGAAGTCTCTTAGGCCATCACCCAAGCATGAGTTGTGCAGTTATATAGTTTGTGAAAGCAAACGGGTTGTTGATAATTCTGAGTTGCTCTTGCGTGAATTTAATGGAAGACTTCAAACCTGA

Coding sequence (CDS)

ATGTCCTTCGGCAATGGAGTGAAATCCTGTGCAAAGCTGGTGAAGTCTTCAGAACCATTGTTGTTGAAATCAGCTAATCGAGGGCTTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCACATGGACACGATGAACCCTACTATTTGCACGCAAAGCACATGTACAACTTGGATAGGATGAAAAATCAGAAGTTGAGCATGAGGCTTGGAGTTTTCACTGCATTCAGCATAGTGATCATTTATCAACGAATGATTCTGAAACCGTCGATGTTCAATTGCAAAAACATATTTGCACGTACTCAAACTATTAGGAACTGGTCTAGATGCAATTTCAATTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAAATTCGAAACCGGAAATTATTATTCTGTTCTTCAGTCCTCTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAATTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCTATTGGGTTTTGGCCTCGTCGAAGGGCACAGTTGTGGTTAGAGAAACTTGGGGCAATTGACCAGTTTTCTGGTAATCTTGCAACTTGTTGGAGTAACATGAAAGAAGAAGAGGCTCTTGAGCGATATAAGCTGATTACAGGGAACTCTGTTTTGTTTCCTGAGTTTCAAGTCTATGAGAAAGGAAACTCTGAATATGATTGGTTAGCTGCTTCACCTGATGGTGCAATTGACAAGATGGTCTATGGATTGCCCTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTGATGGTGATATGGCAAAGGCTTCACCATGGTCTCGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGATTTTTATGTTTGGACTCCTAAAGGTAGTAGTTTGTTTAGATTGTACCGAGATGCCGAATATTGGGAGGTTTTGAAAATTGCTTTGTCCGATTTTTGGTGGAAGCATGTTCAACCAGCAAGGGAGATGTGTAGTAAATATTCCATTACAAATCCCCTCATTGAGCTGAAGTCTCTTAGGCCATCACCCAAGCATGAGTTGTGCAGTTATATAGTTTGTGAAAGCAAACGGGTTGTTGATAATTCTGAGTTGCTCTTGCGTGAATTTAATGGAAGACTTCAAACCTGA

Homology

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BLAST of CmoCh01G010230 vs. TrEMBL
Match: A0A0A0K4T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G302370 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 2.7e-151
Identity = 262/301 (87.04%), Postives = 274/301 (91.03%), Query Frame = 1


Query: 88  KPSMFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKN 147
           K SMFNCK I FA +Q I N S  NFNS SSSS     +FET N+YSVLQS+SFQHWFKN
Sbjct: 6   KQSMFNCKKILFACSQAIGNCSIRNFNSVSSSS----LQFETVNHYSVLQSTSFQHWFKN 65

Query: 148 WKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYK 207
           W+E RKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATCWSNMKEEEALERYK
Sbjct: 66  WQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYK 125

Query: 208 LITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKA 267
           LITGNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GDM  A
Sbjct: 126 LITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNA 185

Query: 268 SPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWW 327
           SPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWW
Sbjct: 186 SPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWW 245

Query: 328 KHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQ 387
           KHVQPAREMCSKY +TNPLIELKSLRPSP+HELCSYIVCESKRVV+NS+LLLREF+GRLQ
Sbjct: 246 KHVQPAREMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQ 302

[Close]

BLAST of CmoCh01G010230 vs. TrEMBL
Match: A0A0A0KG47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G405910 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 4.8e-148
Identity = 257/298 (86.24%), Postives = 269/298 (90.27%), Query Frame = 1


Query: 91  MFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKE 150
           MFN K I FA +Q I N S  NFNS S SS     +FETGN+YSVLQSSSFQHWFKNW+E
Sbjct: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSS----LQFETGNHYSVLQSSSFQHWFKNWQE 60

Query: 151 FRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLIT 210
            RKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATCWSNMKEEEALERYKLIT
Sbjct: 61  LRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLIT 120

Query: 211 GNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPW 270
           GNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GD+  A PW
Sbjct: 121 GNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPW 180

Query: 271 SRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHV 330
           SRVP YCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWWKHV
Sbjct: 181 SRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHV 240

Query: 331 QPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 388
           QPAREMCSKY ITNPL+ELKSLRPSP+HELCSYIVCESKRVV+NS+LLLREF+GRLQT
Sbjct: 241 QPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

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BLAST of CmoCh01G010230 vs. TrEMBL
Match: A0A061F0P2_THECC (DNA-directed RNA polymerase subunit beta OS=Theobroma cacao GN=TCM_025578 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 3.0e-126
Identity = 214/276 (77.54%), Postives = 242/276 (87.68%), Query Frame = 1


Query: 111 NFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKEFRKHKLTASTFAGAIGFWPRR 170
           N  S SSS  S+ ++      +S+LQSSS QHWFKNW+E RK KLTASTF+GAIGFWP R
Sbjct: 68  NHPSQSSSRQSTCYQKFASETHSILQSSSLQHWFKNWQEQRKQKLTASTFSGAIGFWPCR 127

Query: 171 RAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYEKGNSEYDW 230
           RAQLWLEK+GAI+ FSGNLATCWSN+KEEEALERYKLITGN+V FPEFQVY K ++E  W
Sbjct: 128 RAQLWLEKIGAIEPFSGNLATCWSNIKEEEALERYKLITGNTVSFPEFQVYGKMDAEEGW 187

Query: 231 LAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRD 290
           LAASPDG +D+ VYGLP RGVLEIKCPFF GDM+KASPW R+PLYCIPQAQGLMEIMDRD
Sbjct: 188 LAASPDGLVDRFVYGLPLRGVLEIKCPFFGGDMSKASPWRRIPLYCIPQAQGLMEIMDRD 247

Query: 291 WMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHVQPAREMCSKYSITNPLIELKS 350
           WMDFYVWTPKGSSLFR+YRD EYW+VLK+ALSDFWWKHVQPA+E+CSKY IT+PL ELKS
Sbjct: 248 WMDFYVWTPKGSSLFRIYRDVEYWDVLKVALSDFWWKHVQPAKEICSKYVITDPLRELKS 307

Query: 351 LRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQ 387
           LRP+P+HEL SYIV ESKRVVDNS LL+RE NG+L+
Sbjct: 308 LRPAPRHELLSYIVYESKRVVDNSNLLIREINGQLK 343

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BLAST of CmoCh01G010230 vs. TrEMBL
Match: M5XB27_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024412mg PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-123
Identity = 201/261 (77.01%), Postives = 233/261 (89.27%), Query Frame = 1


Query: 125 KFETGNYYSVLQSSSFQHWFKNWKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQ 184
           +F +   YSVL SS  QHWFKNW+  RKHKLTASTFA AIGF+ RRR QLWLEK+GAI+ 
Sbjct: 2   RFASSGGYSVLHSSGLQHWFKNWQGLRKHKLTASTFAAAIGFFHRRRLQLWLEKIGAIEP 61

Query: 185 FSGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVY 244
           FSGNLATCWSN+KEEEALERYKLITGNSVLFPEFQVY   N+  DWL ASPDG +D++VY
Sbjct: 62  FSGNLATCWSNIKEEEALERYKLITGNSVLFPEFQVYGNRNAGDDWLGASPDGVVDRLVY 121

Query: 245 GLPSRGVLEIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSL 304
           GLPSRGVLEIKCPFFDG+M KA+PWSR+PLYC+PQAQGLMEI+DRDWMDFYVWTPKGSSL
Sbjct: 122 GLPSRGVLEIKCPFFDGNMKKATPWSRIPLYCVPQAQGLMEILDRDWMDFYVWTPKGSSL 181

Query: 305 FRLYRDAEYWEVLKIALSDFWWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIV 364
           FR+YRDAEYW+ LK+ LSDFWW HVQPARE+CSK  IT+PL+EL+SL+P+P+HE+CSYIV
Sbjct: 182 FRVYRDAEYWDGLKMVLSDFWWNHVQPAREICSKSQITDPLLELRSLKPAPRHEMCSYIV 241

Query: 365 CESKRVVDNSELLLREFNGRL 386
            ESKR+VD+S+LL+RE NG+L
Sbjct: 242 YESKRIVDSSKLLMREINGKL 262

[Close]

BLAST of CmoCh01G010230 vs. TrEMBL
Match: F6I2K8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00380 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.0e-121
Identity = 204/258 (79.07%), Postives = 230/258 (89.15%), Query Frame = 1


Query: 129 GNYYSVLQSSSFQHWFKNWKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGN 188
           G+ YSVLQSS FQHWFKNW+E RKHKLTASTF GA+GFWPRRR QLWLEKLGA   FSGN
Sbjct: 7   GHTYSVLQSSGFQHWFKNWQEQRKHKLTASTFGGAVGFWPRRRVQLWLEKLGATKPFSGN 66

Query: 189 LATCWSNMKEEEALERYKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPS 248
           LATCWSN+KEEEALERYKLITGN+VLFPEFQVY K + E +WLAASPDG +D +VYGL S
Sbjct: 67  LATCWSNIKEEEALERYKLITGNTVLFPEFQVYGKKDPEDNWLAASPDGIVDSLVYGLHS 126

Query: 249 RGVLEIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLY 308
           RGVLEIKCPFF+GD + ASPWSRVPLY IPQAQGLMEIMDRDWMDFYVWT  GSSLFRLY
Sbjct: 127 RGVLEIKCPFFNGDKSIASPWSRVPLYYIPQAQGLMEIMDRDWMDFYVWTLNGSSLFRLY 186

Query: 309 RDAEYWEVLKIALSDFWWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESK 368
           RDAEYW+VLKIALSDFW+KHV PARE+C K++I +PL EL+SL+P P+HELC YIV ESK
Sbjct: 187 RDAEYWDVLKIALSDFWFKHVLPARELCRKHAINSPLTELRSLKPEPRHELCRYIVYESK 246

Query: 369 RVVDNSELLLREFNGRLQ 387
           R+VD+S+LL+RE +G+LQ
Sbjct: 247 RIVDDSKLLMREIHGKLQ 264

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BLAST of CmoCh01G010230 vs. TAIR10
Match: AT1G13810.1 (AT1G13810.1 Restriction endonuclease, type II-like superfamily protein)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-73
Identity = 128/254 (50.39%), Postives = 169/254 (66.54%), Query Frame = 1


Query: 133 SVLQSSSFQHWFKNWKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATC 192
           +V+ +    HW KNW++ RK++LTAS FA AIGF P  R  LWLEK+GA   F+GN AT 
Sbjct: 48  AVVVTEPTHHWRKNWEDLRKNRLTASNFARAIGFSPDGRRNLWLEKIGAAKPFAGNRATF 107

Query: 193 WSNMKEEEALERYKLITGNSVLFPEFQVYEKGNS-EYDWLAASPDGAIDKMVYGLPSRGV 252
           W    E EALERY  +TGN +L PEF VY+ G S E +WL ASPDG I+ +  G+ S GV
Sbjct: 108 WDIENEVEALERYNELTGNEILIPEFVVYKNGESPEENWLGASPDGVINVVKDGVTSCGV 167

Query: 253 LEIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDA 312
           LE+KCPF + D +K  PW +VP  C+PQ QGLMEI+D DW+D Y WT  GSSLFR++RD 
Sbjct: 168 LEVKCPFDNRDNSKVYPWKKVPYNCVPQLQGLMEIVDTDWLDLYCWTRNGSSLFRVWRDT 227

Query: 313 EYWEVLKIALSDFWWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVV 372
            +WE +K AL DFW  HV PARE+ + + I +P ++L+  +P   HE C  I+  ++R+ 
Sbjct: 228 AFWEDMKPALFDFWQNHVLPAREIYNNFDIKDPQVKLREFKPKHWHEDCKKIMRGAERIS 287

Query: 373 DNSELLLREFNGRL 386
            N+  L  E +G L
Sbjct: 288 ANANRLFYEIDGNL 301

[Close]

BLAST of CmoCh01G010230 vs. TAIR10
Match: AT1G67660.1 (AT1G67660.1 Restriction endonuclease, type II-like superfamily protein)

HSP 1 Score: 186.0 bits (471), Expect = 4.3e-47
Identity = 99/253 (39.13%), Postives = 135/253 (53.36%), Query Frame = 1


Query: 133 SVLQSSSFQHWFKNWKEFRKHKLTASTFAGAIGFWP-RRRAQLWLEKLGAID----QFSG 192
           S+L  S      + W   RK KLT STF+ A+GFW   RRA+LW EK+   D    + S 
Sbjct: 107 SLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESA 166

Query: 193 NLATCWSNMKEEEALERYKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLP 252
             A  W    E  A+ERYK I G  V    F ++   N E+ WL ASPDG +D       
Sbjct: 167 RFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIHS--NEEFHWLGASPDGILDCF----- 226

Query: 253 SRGVLEIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRL 312
             G+LE+KCP+  G      PW +VP Y +PQ QG MEIMDR+W++ Y WT  GS++FR+
Sbjct: 227 --GILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRV 286

Query: 313 YRDAEYWEVLKIALSDFWWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCES 372
            RD  YW ++   L +FWW+ V PARE      +     E+K   P+  H+     + +S
Sbjct: 287 MRDRSYWRIIHDVLREFWWESVIPARE---ALLLGKEDEEVKKYEPTSTHKRTKLAIAKS 346

Query: 373 KRVVDNSELLLRE 381
             +   S+L+ RE
Sbjct: 347 LNLAAESKLVCRE 347

[Close]

BLAST of CmoCh01G010230 vs. TAIR10
Match: AT1G72020.1 (AT1G72020.1 unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-19
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 1


Query: 1  MSFGNGVKSCAKLVKSSEPLLLKSANRGLHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60
          M+    ++S +K++ SSE  + +S  R  HSTGVK+M G  HG  + YYLHAKHMYNLDR
Sbjct: 1  MALSTSIRSVSKIIASSEASVSRSVTRSFHSTGVKKMSGGGHGGYDEYYLHAKHMYNLDR 60

Query: 61 MKNQKLSMRLGVFTAFSI 79
          MK Q L M LGVFTAFSI
Sbjct: 61 MKYQALKMSLGVFTAFSI 78

[Close]

BLAST of CmoCh01G010230 vs. NCBI nr
Match: gi|700189240|gb|KGN44473.1| (hypothetical protein Csa_7G302370 [Cucumis sativus])

HSP 1 Score: 543.1 bits (1398), Expect = 3.9e-151
Identity = 262/301 (87.04%), Postives = 274/301 (91.03%), Query Frame = 1


Query: 88  KPSMFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKN 147
           K SMFNCK I FA +Q I N S  NFNS SSSS     +FET N+YSVLQS+SFQHWFKN
Sbjct: 6   KQSMFNCKKILFACSQAIGNCSIRNFNSVSSSS----LQFETVNHYSVLQSTSFQHWFKN 65

Query: 148 WKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYK 207
           W+E RKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATCWSNMKEEEALERYK
Sbjct: 66  WQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYK 125

Query: 208 LITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKA 267
           LITGNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GDM  A
Sbjct: 126 LITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNA 185

Query: 268 SPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWW 327
           SPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWW
Sbjct: 186 SPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWW 245

Query: 328 KHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQ 387
           KHVQPAREMCSKY +TNPLIELKSLRPSP+HELCSYIVCESKRVV+NS+LLLREF+GRLQ
Sbjct: 246 KHVQPAREMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQ 302

[Close]

BLAST of CmoCh01G010230 vs. NCBI nr
Match: gi|778726529|ref|XP_011659114.1| (PREDICTED: uncharacterized protein LOC101215512 [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 4.3e-150
Identity = 260/298 (87.25%), Postives = 272/298 (91.28%), Query Frame = 1


Query: 91  MFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKE 150
           MFNCK I FA +Q I N S  NFNS SSSS     +FET N+YSVLQS+SFQHWFKNW+E
Sbjct: 1   MFNCKKILFACSQAIGNCSIRNFNSVSSSS----LQFETVNHYSVLQSTSFQHWFKNWQE 60

Query: 151 FRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLIT 210
            RKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATCWSNMKEEEALERYKLIT
Sbjct: 61  LRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLIT 120

Query: 211 GNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPW 270
           GNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GDM  ASPW
Sbjct: 121 GNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPW 180

Query: 271 SRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHV 330
           SRVPLYCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWWKHV
Sbjct: 181 SRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHV 240

Query: 331 QPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 388
           QPAREMCSKY +TNPLIELKSLRPSP+HELCSYIVCESKRVV+NS+LLLREF+GRLQT
Sbjct: 241 QPAREMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of CmoCh01G010230 vs. NCBI nr
Match: gi|700192625|gb|KGN47829.1| (hypothetical protein Csa_6G405910 [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 6.9e-148
Identity = 257/298 (86.24%), Postives = 269/298 (90.27%), Query Frame = 1


Query: 91  MFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKE 150
           MFN K I FA +Q I N S  NFNS S SS     +FETGN+YSVLQSSSFQHWFKNW+E
Sbjct: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSS----LQFETGNHYSVLQSSSFQHWFKNWQE 60

Query: 151 FRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLIT 210
            RKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATCWSNMKEEEALERYKLIT
Sbjct: 61  LRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLIT 120

Query: 211 GNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPW 270
           GNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GD+  A PW
Sbjct: 121 GNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPW 180

Query: 271 SRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHV 330
           SRVP YCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWWKHV
Sbjct: 181 SRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHV 240

Query: 331 QPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 388
           QPAREMCSKY ITNPL+ELKSLRPSP+HELCSYIVCESKRVV+NS+LLLREF+GRLQT
Sbjct: 241 QPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of CmoCh01G010230 vs. NCBI nr
Match: gi|659113272|ref|XP_008456487.1| (PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo])

HSP 1 Score: 527.7 bits (1358), Expect = 1.7e-146
Identity = 255/298 (85.57%), Postives = 269/298 (90.27%), Query Frame = 1


Query: 91  MFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKE 150
           MFN K I FA +Q I N S  NFNS S SS     +FETGN+YSVLQSSSFQHWFKNW+E
Sbjct: 1   MFNSKKILFACSQAIGNCSIRNFNSVSFSS----LQFETGNHYSVLQSSSFQHWFKNWQE 60

Query: 151 FRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLIT 210
            RKHKLTASTFAGAIGFWPRRRAQLWLEKLGAI+ F GNLATCWSNMKEEEALERYKLIT
Sbjct: 61  LRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIEPFCGNLATCWSNMKEEEALERYKLIT 120

Query: 211 GNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPW 270
           GNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GDM  ASPW
Sbjct: 121 GNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPW 180

Query: 271 SRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHV 330
           S+VP YCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWWKHV
Sbjct: 181 SQVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHV 240

Query: 331 QPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 388
           QPARE+CSKY ITNPLIELKS RPSP+HELCSYIVCES+RVV+NS+LLLREF+GRLQT
Sbjct: 241 QPAREICSKYVITNPLIELKSFRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of CmoCh01G010230 vs. NCBI nr
Match: gi|778722290|ref|XP_004149919.2| (PREDICTED: uncharacterized protein LOC101207616 [Cucumis sativus])

HSP 1 Score: 499.6 bits (1285), Expect = 4.9e-138
Identity = 229/255 (89.80%), Postives = 241/255 (94.51%), Query Frame = 1


Query: 133 SVLQSSSFQHWFKNWKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATC 192
           ++ +SSSFQHWFKNW+E RKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATC
Sbjct: 11  AIFKSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATC 70

Query: 193 WSNMKEEEALERYKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVL 252
           WSNMKEEEALERYKLITGNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVL
Sbjct: 71  WSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVL 130

Query: 253 EIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAE 312
           EIKCPFF+GD+  A PWSRVP YCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD E
Sbjct: 131 EIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPE 190

Query: 313 YWEVLKIALSDFWWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVD 372
           YW+VLKIALSDFWWKHVQPAREMCSKY ITNPL+ELKSLRPSP+HELCSYIVCESKRVV+
Sbjct: 191 YWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVN 250

Query: 373 NSELLLREFNGRLQT 388
           NS+LLLREF+GRLQT
Sbjct: 251 NSKLLLREFDGRLQT 265

The following BLAST results are available for this feature:

BLAST of CmoCh01G010230 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G010230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4T5_CUCSA	2.7e-151	87.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G302370 PE=4 SV=1	[more]
A0A0A0KG47_CUCSA	4.8e-148	86.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G405910 PE=4 SV=1	[more]
A0A061F0P2_THECC	3.0e-126	77.54	DNA-directed RNA polymerase subunit beta OS=Theobroma cacao GN=TCM_025578 PE=4 S...	[more]
M5XB27_PRUPE	1.1e-123	77.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024412mg PE=4 SV=1	[more]
F6I2K8_VITVI	1.0e-121	79.07	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00380 PE=4 SV=...	[more]

BLAST of CmoCh01G010230 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13810.1	1.2e-73	50.39	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.1	4.3e-47	39.13	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G72020.1	2.9e-19	57.69	unknown protein	[more]

BLAST of CmoCh01G010230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189240\|gb\|KGN44473.1\|	3.9e-151	87.04	hypothetical protein Csa_7G302370 [Cucumis sativus]	[more]
gi\|778726529\|ref\|XP_011659114.1\|	4.3e-150	87.25	PREDICTED: uncharacterized protein LOC101215512 [Cucumis sativus]	[more]
gi\|700192625\|gb\|KGN47829.1\|	6.9e-148	86.24	hypothetical protein Csa_6G405910 [Cucumis sativus]	[more]
gi\|659113272\|ref\|XP_008456487.1\|	1.7e-146	85.57	PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo]	[more]
gi\|778722290\|ref\|XP_004149919.2\|	4.9e-138	89.80	PREDICTED: uncharacterized protein LOC101207616 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011335	Restrct_endonuc-II-like
IPR011604	Exonuc_phg/RecB_C
IPR019080	YqaJ_viral_recombinase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0004518	nuclease activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed RNA polymerase activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G010230.1	CmoCh01G010230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011335	Restriction endonuclease type II-like	unknown	SSF52980	Restriction endonuclease-like	coord: 131..336 score: 2.84
IPR011604	Exonuclease, phage-type/RecB, C-terminal	GENE3D	G3DSA:3.90.320.10		coord: 145..335 score: 6.2
IPR019080	YqaJ viral recombinase	PFAM	PF09588	YqaJ	coord: 147..289 score: 1.2
None	No IPR available	PANTHER	PTHR36003	FAMILY NOT NAMED	coord: 2..81 score: 4.1
None	No IPR available	PANTHER	PTHR36003:SF2	SUBFAMILY NOT NAMED	coord: 2..81 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G010230	CmaCh09G011060	Cucurbita maxima (Rimu)	cmacmoB048
CmoCh01G010230	CmaCh01G009840	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G010230	Cla015047	Watermelon (97103) v1	cmowmB405
CmoCh01G010230	ClCG09G009960	Watermelon (Charleston Gray)	cmowcgB379
CmoCh01G010230	Lsi02G019860	Bottle gourd (USVL1VR-Ls)	cmolsiB397
CmoCh01G010230	Cp4.1LG06g07560	Cucurbita pepo (Zucchini)	cmocpeB464
CmoCh01G010230	Cp4.1LG02g08780	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G010230	Cla97C09G172780	Watermelon (97103) v2	cmowmbB498
CmoCh01G010230	Bhi09G001236	Wax gourd	cmowgoB0610
CmoCh01G010230	Carg27546	Silver-seed gourd	carcmoB0379
CmoCh01G010230	Carg23296	Silver-seed gourd	carcmoB0382

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G010230	CmoCh09G011130	Cucurbita moschata (Rifu)	cmocmoB018

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G010230	Silver-seed gourd	carcmoB0093
CmoCh01G010230	Silver-seed gourd	carcmoB1120
CmoCh01G010230	Cucumber (Chinese Long) v3	cmocucB0574
CmoCh01G010230	Wax gourd	cmowgoB0621
CmoCh01G010230	Cucurbita moschata (Rifu)	cmocmoB367
CmoCh01G010230	Cucumber (Gy14) v1	cgycmoB0135
CmoCh01G010230	Wild cucumber (PI 183967)	cmocpiB484
CmoCh01G010230	Cucumber (Chinese Long) v2	cmocuB478
CmoCh01G010230	Melon (DHL92) v3.5.1	cmomeB387
CmoCh01G010230	Cucumber (Gy14) v2	cgybcmoB914
CmoCh01G010230	Melon (DHL92) v3.6.1	cmomedB444