ClCG09G009960 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG09G009960
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	SLL1 protein
Location	CG_Chr09 : 9715279 .. 9721876 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGCTTCCCTTTTGCACATCAAATTCCCTTCGATCTTCGTCACTGCGAAAACAAGAGGGATCATTTTCTCGACCACCCACCACTGTAAGCCATCAATTTTCTCTTTCTTGTTGATTTCATAATTGTTTCTCGTTTCTCGATCAGCCTTCCATTTTTTTTTCCTTTCGTTCTATCATTTTTTTTTTGTTATTGACGTGATCGATTTCAATTTAAAGGAAAACTAATCTTCAGTATCTGTTTCTGATGGACTTCTGTAGTTTCCTTGCTGTATCGTTCAGATCTGTGGATTTGTCTTTTGGATTTGTTTGGGATGTTTTTCTAATTGCATCTAATGATCTGAAATGAAGAATGTGATGGTTGCTTTACAATTCTATGTGTTTATATGAAGCGGACGACAAAGATGCAGAATTTTTGGGTTCCATTTTGTTATCCTGACCACATAGTATAACTCGAAGAAGTCTGGGGATTTTCGCTGTATCTGTTTGTGTTTAATTGTCTTTTGTTTTTCGTATTTGCTTATGGCACTTCATAGCTTTCGATTATTTATTAGCCTTTATAGGTTTGGTGAAGTATATACGTCATTATTCTGCCAAAATAGTGATGTTTCTGCCCACATCTCTAGACCCAAATTAACTATTTGCAATCTTGTTTTTTTCAAAACTTGTTTCAAACATGAATAGAGTTTCAGAATATTTAGTTTTTTTTGGTTTCTTGTGTTAATGAGCTCCTCCACTCCCGGCGCACCCAAGTGGCCTTTAGTAATTATTTGAATTCTCTGAGTTTATTGACGTTATTTTAATTGTAAAGGAACTCTTGGTTGAGCAAATAAGCAAAAAGGGAGAACTAACTGCAAGCAGAGAAAATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTGGTGAAATCAGGTTTCGTCACTTTGTTAGCTAGCATTTTAGATTTACTTTACCTTACGTTTTACAGTTCCTGCCTATGGTCTGAATTTGCAACAATCTTTCCCAAGTTCCCATAATAGTGTAGTTCTAGGATTTTCTCAAACAATTTTAAGTAAAGAAACAAGCAAATCATTAATCAATGTATAAGTAAACTGAAAGAAATTGTAAAAAACAACAAAAGATTATCATAAAATGCAGTTTTAGGAGACTAATGGAGCTTGAACATTATTACAAATACTGGAGACTAATAGCACTACTAAGAACGAGTGTATATATATATATATATATATATATATATATATGAAAGGATATGTTTGCTAAAATGGATTGGTAGGTCTCTTTAGTGGGTTGTGAGATGGGTTATTTTCTCTCATTTTACATGGGTCTTTCTCTTGGTAACAGTCTTAGAACTTAGTTGTATTGAGATTGGGTTGTGGAAGAGATTAAAAAATGTCTATTCTTGTTGAACATGAGTTTATCCTCTAAGGAGTTCAGACAAACTTTTGTCTAGGACCTCTGGTGGCTTTGAATTTACCTCTCGACTTGCCATGGATGCTTATAGAAAAGTTTGTTGATGAAATTCCACATCTGAATCAGAGTCTCCAGTTAGTTCCAAAGCCTTTGACTTTCAACATCTCACTGAGGAAGTCCCAATCAACCTTATTAAAAGCTTTTTCCACATCAAGTTTTATGACCACCTCCCCTTTTGTTTTTTCTTTGCCAAGCTTCAATGATCTCATTGGCTATGAGCAATGTATCCAATATTTGTCTTCCTTCCATAAATGCTGATTGGTGATCCATAATTGTCAAAATACATCTACAGCTGTGGCAATAGGTGTGTGATTTGGTAATACACCAATTTGGCCACTATTCGTAACTAAAATGATTTCTTTCCCTTCTGAATCCCAAATAATTCGATTCGGAGTTCAGAATACTAAGATTTAAGGTCATTTCTTCAATTTGCTCTCCATTTCTAAGTTCGTAGCCTTCGCAGTAGCGTCATCGATTTTACCTACCAAATAAAAGACTTGTTTGGGAAGACCATCTAATTCTCCGAAAAGGATTAATTTAAACCCAATGTATTTCTTGGGGGAACCAGTAAATACTTTTGCTACGAGAAAAGGTTCGGATAAGAAACACTCAATTTTTCGTGCTCGTGCTACGTTTAAGCGATCCTCTTTGAATAATTCATCCAAGGATAGCTATAATGTCCTGCAGTTCTTTGTATTGTTGTGAGGTTTGTTTAACTCTTTGTGCAGTTTCATAATGTTCTTCACCAACGATTCGAATGAAAGGCCTTTTGTTAGTTAGTTTGAGAATACCTGGGAGATCATTTTGTAAATACAAGTAAAGACTACAATCTTCAACTCTTCTAGCATTAGGCAGACATATGTTTCATTAACATTGGAGTTGATAATATCTTCATGAGAAGAAAAATCTTGGAGCACCCGAATTAGATCGCGTTGAGGATGTTCCAAATTTTTTTAAAGAACTCTGCATTGGAGCCATCTGGTCTAGGAGATTTATGAGAGGCCAAAGCCTTAATTGCCAACCAGATTTCTTCTTCCGTGAAGGGATCTTCTGAACCCCTACTTTGCTCATTGCTTTTAAGTATCCCAATCGATAGGGAGTGGTAGAAATATGCTGCCTTGTTTCTTGGTGAAAAGATCCTTGTAGAAGGAAATAAATTCAGCCTCAATCTTGGTGTCTTGAAGTAGGCTAGTGTTCTATGCAGTGAGAACTTTTGTAATACTATTTTTCCTTTTTGTGGCAATAACATACTTATGGGAAAAACAAAAAGTGGTGTTTTCATCCCTTCACGGAGCCATTTTGTCTTACATTTCTACCTCCATCTAATCTCCTCATCAGTTGTAATGTTAAGTAGTCTTTCTCTAATTGCAAATCTTGTTTCATTTAGGGCCTCTGGAAAGCTATTTTCTTCTCTCTCTTTAGCATTATATACCAATTCCTTGAGGGAAACTTTCTGCGATGTGTTAAATGTCGAAGTTGGTCAAGTTCCATTTCTTAAGGACAGATTTCAACCCTTTTACTAACTTTTCGATGACACCATGGCCAGGGCATCTAAAGATAGGATTCAAGTTCCACCAATTGTTGTCAGCTGTACAAATCATCGAGTTTTGAATAAAAAGAGGCTTCTCAAAATTGTTGGTCGCACCATAGATTCTTGAGGTTGAAACCCAAAAGTTGTAGCCATCAGCCATGGAAATAAAAGAGATCAGGGAGAGAGAATGCACCTTGAGCGGTTAGCAGTAGGGAAAGAAGCTCCATTCGAAAGCATAAGAATCCCCTCCAAACCCCAACAATGCCACGCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTCCCTCCTCCTCTACATGGTTGAAAAGCCTCTAAAATGAGCCATTCGGTATCTCTAGAGCTCCAAATGGACCTGACGAAAAGATTATCAATGGATCTATACTTGGTTTCTTGAAGGATGACAATTGATGGCTTGATATTAGAGGTGAGGTTTTTGGTTATTGCCCTTTATCTTCCGTAAACCCAATTTGCGAATGTTACATGATAAAATTAACATTAAGTAGATTGTGACCCCTTTCTCTGATTGACCTTAGCCTTTTCGGCATAAGAGATTGAGGGAGACAAGCTCCTAACCTCCCAGATGCCTTTCCTCTGCTTAGTCGAGTATTAACCTCCCAGATGCCTTTCCTCTACTTAGTCGAGTATTTGTTCTTGTTTTCCCGAGCAGGAGTAGTCATGATACAAAGACCACAATCTTCAAACCTAGGTGCAAGGGCCACCTAGTGAGGCTTTTGTCTAGTTTTGAGTGGATCCCAACTTACCTTCTCTCTTTGTTTAGGGTCCTTGTCTCAATGAGCAAAAGGCTAGAGAAGTTTATGAGTGATTTTGTATGGGAAGAGGGATTGACGAGGGGAAAGGTGCAATGTAGTCAAGTGGGAGGTGGTGGCCAAGTCGTTGCACCGACTTTTGTGCTATTGGTTGGGATTTTGGGTTGAGGGAAATAATAGAATTTTTAGAAAGGTTAAGAGCTCTTAGGAGGAGGAGATATGGTCCGTGTTAGATTCCATGTCTCTTTTTTGCAATTACCCTTTAGGTTTTCTTTTGCTAGATTGGAGCCTCTCTTGCTTTATTTGGCTTCTACTGTGGTGCTGTCTTTTTGTGTCCCTTGTGTATTCTTTCATTTTTCTCATGGTTCCTTTGGGAAATCTTATATTCTATGATTAAAACGTCAGTATATAATGAATGGAGGCTAGCTTTTGCTTCCAATTTTCTTTTTCAGTTTGAATCACAACATTTTTTTTTTCTCGGCTAATGCCTCATATAGTCCAAGTCCTCCATTCTCCCTTCACCCTTGTCCTTCAAAACTTATGGTTTGGGTTCGTTTCAATATTCTTTCTCAACTCAAAGCAAAATGGTTGACATGCATGTGCTAGCCCAAGACAGCTAACTCCATTCTCCCTTGTCGTCCTCCAAAATGTATGGTTTGGATCTTTTTCAGTATTCTTTTTCAAATTGAGAAATGGTTGCTGTGCTAGTACATAAGGTCGAGAAGAGTAATAATTTCTCTTTAAATTTTGTGTGTGTGTGTGTGTGTTTGTGTTTTGCCTATATTTTTTGAATAAAACATTTTGTTTTTATCTAGTGCAAGGAAGTGATTAGTGAATTCAAATGAACAAATATAATATTATAGTTTAAAACAGCATTTTTATTTGGGATGCATCTGTCTTAGTATAAAATACTCTATACAAAAGATATAGATGTTCATAAAACGATGTTCAGTAAGCTGTAGGCCTTGATATATTGTGTTAGAATGTTATATGTAGTGGCAATACATTTTACAGTAATGTACGCTTGATTCATGGAAGATATTTTGCTTAGTGCTCCAATTGAGATATTTTAATGTCTCTGCTTTTCTGGTTCTAGCGATGGGGTATGTTGGAGATTTCCTATTTGCATACTATTATTTCACTCAAAAGGTTCAATCACTTTTGTGTGGTTACATCAAATATGCAATCCTAGTAATGTCTAGTGCAAAGTTCACTTCCAATTGAAAATCTTGATATCACACATATTTCAAAATTCCTAGTCATATAAATAATGCGAAGTTCACATTCACATTTGAATTTTGTAGAAGATTTCAGATCTGGGTTCTGTCCCGACAATATTTTGCCACTTAGAATTTATGGATTAGTTCAGTGCTGCTTCATGATAACAGTCTCTATGAAGCATTGACACTTAGGTTTGAGTAATGTGTCCATGTCCTAAATTTGTTAGCACAATAGATGTGTGTCAGATACTCGTGGTAGAAAGTTGATGTGTTTTGAATCCTATTAAGAAATCTTGAGAACAAAATGCACTATGTGTATTTTTTAGCATATAAATGCATAAGCTTTTTGACTTTATAGTTTTTTGGTATGAAAATTATACATTTAAAGAAAGTGCCTTTTTTTTTTTTTTTCCAGTGAATGATGTTTTTGTAATATCCATATGTTCTAGATTTTTAGAAAATGGCGTGCCATCTTGTTCTTGTTTTGTGTTCATATGTGTTTCATAGATTACTCTATCCGTTAGTACTAATTCATGATGTTTGTGTACCAATCAAGGTTTCTAAATCCTAAAAAATGATGGTTCTGTCTGATCTCATGCCGCAGCTAATCGAGGGTTTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCTCACGGACATGACGAACCGTATTATTTGCATGCAAAGCATATGTACAACTTGGATAGGATGAAACATCAGAAGTTGACCATGACGCTTGGAGTATTAACTGCATTCAGCATTGGCGTGGGTGTTCCAATCTATGCAGTCATCTTTCAGCAAAAGAAGACGGCCTCTGGATGATGACCAAAAGAATGTGCGTGTCATTTTAGCACGACAATAAGAAGATTCGTTGCGCCTCAGTTTGTCTCGTTCATTTTCTTAACTTTGTATAAACCCTCATTTCAAAATGCACAGAAAACTCAGAACGTGGATTCTGATTTTGGCAAATAAGTCTCTTCAACATCCCATTATTTGACAATTTTGTTCCATTCTGTTTCTGCTTTTAGTTTGTTCACAACACTTTCTCCATTCCAATGAAAATATGATATGTATGGTAGGAGGTGACATGGTCGGTATATTTTTGTATGCAGTGGATACCTGTTGGTTTTTTGCTAATGGATACCCTGGCGGTATAAGTTTGGCCTTTCTAA

mRNA sequence

AAAAGGCTTCCCTTTTGCACATCAAATTCCCTTCGATCTTCGTCACTGCGAAAACAAGAGGGATCATTTTCTCGACCACCCACCACTGAACTCTTGGTTGAGCAAATAAGCAAAAAGGGAGAACTAACTGCAAGCAGAGAAAATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTGGTGAAATCAGCTAATCGAGGGTTTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCTCACGGACATGACGAACCGTATTATTTGCATGCAAAGCATATGTACAACTTGGATAGGATGAAACATCAGAAGTTGACCATGACGCTTGGAGTATTAACTGCATTCAGCATTGGCGTGGGTGTTCCAATCTATGCAGTCATCTTTCAGCAAAAGAAGACGGCCTCTGGATGATGACCAAAAGAATGTGCGTGTCATTTTAGCACGACAATAAGAAGATTCGTTGCGCCTCAGTTTGTCTCGTTCATTTTCTTAACTTTGTATAAACCCTCATTTCAAAATGCACAGAAAACTCAGAACGTGGATTCTGATTTTGGCAAATAAGTCTCTTCAACATCCCATTATTTGACAATTTTGTTCCATTCTGTTTCTGCTTTTAGTTTGTTCACAACACTTTCTCCATTCCAATGAAAATATGATATGTATGGTAGGAGGTGACATGGTCGGTATATTTTTGTATGCAGTGGATACCTGTTGGTTTTTTGCTAATGGATACCCTGGCGGTATAAGTTTGGCCTTTCTAA

Coding sequence (CDS)

ATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTGGTGAAATCAGCTAATCGAGGGTTTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCTCACGGACATGACGAACCGTATTATTTGCATGCAAAGCATATGTACAACTTGGATAGGATGAAACATCAGAAGTTGACCATGACGCTTGGAGTATTAACTGCATTCAGCATTGGCGTGGGTGTTCCAATCTATGCAGTCATCTTTCAGCAAAAGAAGACGGCCTCTGGATGA

Protein sequence

MSLANGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG

Homology

[Close]

BLAST of ClCG09G009960 vs. TrEMBL
Match: A0A0A0LQ20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403690 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-45
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MSLANGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60
          MSL+NGVKSCAKLLKSSE LL KSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR
Sbjct: 1  MSLSNGVKSCAKLLKSSEPLLEKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60

Query: 61 MKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          MK+QKLTMTLGVLTAFSIGVGVPIYAV+FQQKKTASG
Sbjct: 61 MKYQKLTMTLGVLTAFSIGVGVPIYAVVFQQKKTASG 97

[Close]

BLAST of ClCG09G009960 vs. TrEMBL
Match: A0A061FJK9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036395 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 8.6e-38
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 1


Query: 1  MSLANGVKSCAKLL-KSSESLLVKSANRGFHSTGVKRMG-GHAHGHDEPYYLHAKHMYNL 60
          M+L  G++S +KLL  SS+SLL KSANRGFHSTGVKRMG GHAHGHDEPYYLHAKHMYNL
Sbjct: 1  MALNGGLRSASKLLTSSSQSLLSKSANRGFHSTGVKRMGGGHAHGHDEPYYLHAKHMYNL 60

Query: 61 DRMKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          DRMKHQKL M+LGV TAFSIGVG+P+YAVIFQQKKTASG
Sbjct: 61 DRMKHQKLKMSLGVFTAFSIGVGLPVYAVIFQQKKTASG 99

[Close]

BLAST of ClCG09G009960 vs. TrEMBL
Match: A0A068VE77_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00005833001 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.5e-37
Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 1


Query: 1  MSLANGVKSCA-KLLKSSESLLVKSANRGFHSTGVKRMG-GHAHGHDEPYYLHAKHMYNL 60
          M+L NG++SCA KLL ++ESLL KS NRGFHS+GVKRMG GHAHGHDEPYYLHAKHMYNL
Sbjct: 1  MALNNGMRSCASKLLTTTESLLSKSTNRGFHSSGVKRMGGGHAHGHDEPYYLHAKHMYNL 60

Query: 61 DRMKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          DRMK+Q L M+LGV TAFSIGVGVP++AVIFQQKKTASG
Sbjct: 61 DRMKNQGLKMSLGVFTAFSIGVGVPVFAVIFQQKKTASG 99

[Close]

BLAST of ClCG09G009960 vs. TrEMBL
Match: A0A0D2S8N5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G263300 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.0e-35
Identity = 80/98 (81.63%), Postives = 87/98 (88.78%), Query Frame = 1


Query: 1  MSLANGVKSCAKLL-KSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD 60
          M+L  G++S +K L  SS+SLL KS NRGFHSTGVKRMGG  HGHDEPYYLHAKHMYNLD
Sbjct: 1  MALNGGLRSASKFLTSSSQSLLHKSGNRGFHSTGVKRMGG-GHGHDEPYYLHAKHMYNLD 60

Query: 61 RMKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          RMK+QKLTM+LGVLTAFSIGV VPIYAVIFQQKKTASG
Sbjct: 61 RMKNQKLTMSLGVLTAFSIGVFVPIYAVIFQQKKTASG 97

[Close]

BLAST of ClCG09G009960 vs. TrEMBL
Match: A0A0B0P004_GOSAR (TonB-dependent heme receptor A OS=Gossypium arboreum GN=F383_20918 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.8e-35
Identity = 79/98 (80.61%), Postives = 87/98 (88.78%), Query Frame = 1


Query: 1  MSLANGVKSCAKLL-KSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD 60
          M++  G++S +K L  SS+SLL KS NRGFHSTGVKRMGG  HGHDEPYYLHAKHMYNLD
Sbjct: 1  MAMNGGLRSASKFLTSSSQSLLHKSGNRGFHSTGVKRMGG-GHGHDEPYYLHAKHMYNLD 60

Query: 61 RMKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          RMK+QKLTM+LGVLTAFSIGV VPIYAVIFQQKKTASG
Sbjct: 61 RMKNQKLTMSLGVLTAFSIGVFVPIYAVIFQQKKTASG 97

[Close]

BLAST of ClCG09G009960 vs. TAIR10
Match: AT1G72020.1 (AT1G72020.1 unknown protein)

HSP 1 Score: 131.3 bits (329), Expect = 3.1e-31
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 1  MSLANGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60
          M+L+  ++S +K++ SSE+ + +S  R FHSTGVK+M G  HG  + YYLHAKHMYNLDR
Sbjct: 1  MALSTSIRSVSKIIASSEASVSRSVTRSFHSTGVKKMSGGGHGGYDEYYLHAKHMYNLDR 60

Query: 61 MKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          MK+Q L M+LGV TAFSIGVGVPI+AV+FQQ+KT SG
Sbjct: 61 MKYQALKMSLGVFTAFSIGVGVPIFAVVFQQRKTQSG 97

[Close]

BLAST of ClCG09G009960 vs. NCBI nr
Match: gi|449441746|ref|XP_004138643.1| (PREDICTED: uncharacterized protein LOC101217188 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-45
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MSLANGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60
          MSL+NGVKSCAKLLKSSE LL KSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR
Sbjct: 1  MSLSNGVKSCAKLLKSSEPLLEKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60

Query: 61 MKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          MK+QKLTMTLGVLTAFSIGVGVPIYAV+FQQKKTASG
Sbjct: 61 MKYQKLTMTLGVLTAFSIGVGVPIYAVVFQQKKTASG 97

[Close]

BLAST of ClCG09G009960 vs. NCBI nr
Match: gi|659081266|ref|XP_008441241.1| (PREDICTED: uncharacterized protein LOC103485430 [Cucumis melo])

HSP 1 Score: 188.7 bits (478), Expect = 4.7e-45
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 1


Query: 1  MSLANGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60
          MSL NG+KSCAKLLKSSE LLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR
Sbjct: 1  MSLGNGMKSCAKLLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60

Query: 61 MKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTAS 97
          MK+QKLTMTLGVLTAFSIGVGVPIYAV+FQQKKTAS
Sbjct: 61 MKYQKLTMTLGVLTAFSIGVGVPIYAVVFQQKKTAS 96

[Close]

BLAST of ClCG09G009960 vs. NCBI nr
Match: gi|778726537|ref|XP_011659116.1| (PREDICTED: uncharacterized protein LOC101215354 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 5.2e-44
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MSLANGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60
          MSLANG+KSCAKLLKSSE LL KSA RGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR
Sbjct: 1  MSLANGLKSCAKLLKSSEPLLEKSAKRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDR 60

Query: 61 MKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          MK+QKLTMTLGVLTAFSIGV VPIYAV+FQQKKTASG
Sbjct: 61 MKNQKLTMTLGVLTAFSIGVAVPIYAVVFQQKKTASG 97

[Close]

BLAST of ClCG09G009960 vs. NCBI nr
Match: gi|590603482|ref|XP_007020021.1| (Uncharacterized protein TCM_036395 [Theobroma cacao])

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 1


Query: 1  MSLANGVKSCAKLL-KSSESLLVKSANRGFHSTGVKRMG-GHAHGHDEPYYLHAKHMYNL 60
          M+L  G++S +KLL  SS+SLL KSANRGFHSTGVKRMG GHAHGHDEPYYLHAKHMYNL
Sbjct: 1  MALNGGLRSASKLLTSSSQSLLSKSANRGFHSTGVKRMGGGHAHGHDEPYYLHAKHMYNL 60

Query: 61 DRMKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          DRMKHQKL M+LGV TAFSIGVG+P+YAVIFQQKKTASG
Sbjct: 61 DRMKHQKLKMSLGVFTAFSIGVGLPVYAVIFQQKKTASG 99

[Close]

BLAST of ClCG09G009960 vs. NCBI nr
Match: gi|661877258|emb|CDP18882.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-36
Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 1


Query: 1  MSLANGVKSCA-KLLKSSESLLVKSANRGFHSTGVKRMG-GHAHGHDEPYYLHAKHMYNL 60
          M+L NG++SCA KLL ++ESLL KS NRGFHS+GVKRMG GHAHGHDEPYYLHAKHMYNL
Sbjct: 1  MALNNGMRSCASKLLTTTESLLSKSTNRGFHSSGVKRMGGGHAHGHDEPYYLHAKHMYNL 60

Query: 61 DRMKHQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG 98
          DRMK+Q L M+LGV TAFSIGVGVP++AVIFQQKKTASG
Sbjct: 61 DRMKNQGLKMSLGVFTAFSIGVGVPVFAVIFQQKKTASG 99

The following BLAST results are available for this feature:

BLAST of ClCG09G009960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ20_CUCSA	1.1e-45	94.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403690 PE=4 SV=1	[more]
A0A061FJK9_THECC	8.6e-38	82.83	Uncharacterized protein OS=Theobroma cacao GN=TCM_036395 PE=4 SV=1	[more]
A0A068VE77_COFCA	9.5e-37	80.81	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00005833001 PE=4 SV=1	[more]
A0A0D2S8N5_GOSRA	4.0e-35	81.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G263300 PE=4 SV=1	[more]
A0A0B0P004_GOSAR	6.8e-35	80.61	TonB-dependent heme receptor A OS=Gossypium arboreum GN=F383_20918 PE=4 SV=1	[more]

BLAST of ClCG09G009960 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72020.1	3.1e-31	62.89	unknown protein	[more]

BLAST of ClCG09G009960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441746\|ref\|XP_004138643.1\|	1.6e-45	94.85	PREDICTED: uncharacterized protein LOC101217188 [Cucumis sativus]	[more]
gi\|659081266\|ref\|XP_008441241.1\|	4.7e-45	94.79	PREDICTED: uncharacterized protein LOC103485430 [Cucumis melo]	[more]
gi\|778726537\|ref\|XP_011659116.1\|	5.2e-44	92.78	PREDICTED: uncharacterized protein LOC101215354 [Cucumis sativus]	[more]
gi\|590603482\|ref\|XP_007020021.1\|	1.2e-37	82.83	Uncharacterized protein TCM_036395 [Theobroma cacao]	[more]
gi\|661877258\|emb\|CDP18882.1\|	1.4e-36	80.81	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed RNA polymerase activity
molecular_function	GO:0004518	nuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G009960.1	ClCG09G009960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36003	FAMILY NOT NAMED	coord: 2..97 score: 2.2
None	No IPR available	PANTHER	PTHR36003:SF2	SUBFAMILY NOT NAMED	coord: 2..97 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG09G009960	Cla015047	Watermelon (97103) v1	wcgwmB007
ClCG09G009960	Cla97C09G172780	Watermelon (97103) v2	wcgwmbB035
ClCG09G009960	Bhi09G001237	Wax gourd	wcgwgoB073
ClCG09G009960	CSPI07G12670	Wild cucumber (PI 183967)	cpiwcgB551
ClCG09G009960	gCucsa.079490.2	Cucumber (Gy14) v1	cgywcgB081
ClCG09G009960	CmaCh09G011060	Cucurbita maxima (Rimu)	cmawcgB008
ClCG09G009960	CmaCh01G009850	Cucurbita maxima (Rimu)	cmawcgB381
ClCG09G009960	CmoCh09G011130	Cucurbita moschata (Rifu)	cmowcgB002
ClCG09G009960	CmoCh01G010230	Cucurbita moschata (Rifu)	cmowcgB379
ClCG09G009960	Lsi02G019870	Bottle gourd (USVL1VR-Ls)	lsiwcgB159
ClCG09G009960	Cp4.1LG06g07560	Cucurbita pepo (Zucchini)	cpewcgB690
ClCG09G009960	Cp4.1LG02g08810	Cucurbita pepo (Zucchini)	cpewcgB479
ClCG09G009960	Carg23296	Silver-seed gourd	carwcgB0267

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG09G009960	Cucurbita maxima (Rimu)	cmawcgB607
ClCG09G009960	Cucurbita moschata (Rifu)	cmowcgB234
ClCG09G009960	Cucurbita moschata (Rifu)	cmowcgB605
ClCG09G009960	Wild cucumber (PI 183967)	cpiwcgB554
ClCG09G009960	Cucumber (Chinese Long) v2	cuwcgB525
ClCG09G009960	Melon (DHL92) v3.5.1	mewcgB181
ClCG09G009960	Cucumber (Gy14) v2	cgybwcgB485
ClCG09G009960	Melon (DHL92) v3.6.1	medwcgB176
ClCG09G009960	Silver-seed gourd	carwcgB0065
ClCG09G009960	Silver-seed gourd	carwcgB0798
ClCG09G009960	Cucumber (Chinese Long) v3	cucwcgB547
ClCG09G009960	Wax gourd	wcgwgoB062
ClCG09G009960	Cucurbita maxima (Rimu)	cmawcgB245