CmoCh01G003460 (gene) Cucurbita moschata (Rifu)

NameCmoCh01G003460
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionZinc finger protein 4
LocationCmo_Chr01 : 1658340 .. 1659122 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCTTTGGCAAATGATTCTGACATAAGTAGCCAAGTTGCTTCCAACATTTCCCTCCATGAAAATTCTGATGATAATAGCCTCATAACTAACTCCTTTCTTGCTAACCCCGTTGCTGCTCAACCAGGATTCAAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGAAGATCTCGAAACTCGGGATTCGACAGGATTTTCATTGTCAAGCACAAGTGAGAGTAGCAATGAACCAACATGCCACCCCACAGCAGCTGCTGCTATCCCAAGAGTGTTTTCTTGCAACTTCTGTCAGCGCAAGTTCTTTAGTTCGCAAGCTCTTGGTGGCCACCAGAATGCGCATAAGCGCGAGCGAACCTTGGCGAAACGGGCAATGCGTATGGGGATTCTAGCAGAAAGATATGCAAATCTAGCATCTCTACCATTGAAAGGGTCATCATTCAGGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGATTTACTGCACCAATGAAGCCTACTGATATTGGAAGCAGTGCTAGATTCGAACCGGGTCATATAGGCATGCCGATTTTCTTGGACGACGATGAAGCGGAGGTTATGTGGCCAGGTAGTTTTCGTCCAACGGCAGAAACTAGAAACACTCATGAACTAACTCAACCAAGTTTCATACTAACTGGTATTTCAAGAATAAGCTCAATGGATAAAGTGTCGTCGGAGGATGTAGAAGACTCGACGCCTGATCTCACGCTCAAACTCTAA

mRNA sequence

ATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCTTTGGCAAATGATTCTGACATAAGTAGCCAAGTTGCTTCCAACATTTCCCTCCATGAAAATTCTGATGATAATAGCCTCATAACTAACTCCTTTCTTGCTAACCCCGTTGCTGCTCAACCAGGATTCAAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGAAGATCTCGAAACTCGGGATTCGACAGGATTTTCATTGTCAAGCACAAGTGAGAGTAGCAATGAACCAACATGCCACCCCACAGCAGCTGCTGCTATCCCAAGAGTGTTTTCTTGCAACTTCTGTCAGCGCAAGTTCTTTAGTTCGCAAGCTCTTGGTGGCCACCAGAATGCGCATAAGCGCGAGCGAACCTTGGCGAAACGGGCAATGCGTATGGGGATTCTAGCAGAAAGATATGCAAATCTAGCATCTCTACCATTGAAAGGGTCATCATTCAGGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGATTTACTGCACCAATGAAGCCTACTGATATTGGAAGCAGTGCTAGATTCGAACCGGGTCATATAGGCATGCCGATTTTCTTGGACGACGATGAAGCGGAGGTTATGTGGCCAGGTAGTTTTCGTCCAACGGCAGAAACTAGAAACACTCATGAACTAACTCAACCAAGTTTCATACTAACTGGTATTTCAAGAATAAGCTCAATGGATAAAGTGTCGTCGGAGGATGTAGAAGACTCGACGCCTGATCTCACGCTCAAACTCTAA

Coding sequence (CDS)

ATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCTTTGGCAAATGATTCTGACATAAGTAGCCAAGTTGCTTCCAACATTTCCCTCCATGAAAATTCTGATGATAATAGCCTCATAACTAACTCCTTTCTTGCTAACCCCGTTGCTGCTCAACCAGGATTCAAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGAAGATCTCGAAACTCGGGATTCGACAGGATTTTCATTGTCAAGCACAAGTGAGAGTAGCAATGAACCAACATGCCACCCCACAGCAGCTGCTGCTATCCCAAGAGTGTTTTCTTGCAACTTCTGTCAGCGCAAGTTCTTTAGTTCGCAAGCTCTTGGTGGCCACCAGAATGCGCATAAGCGCGAGCGAACCTTGGCGAAACGGGCAATGCGTATGGGGATTCTAGCAGAAAGATATGCAAATCTAGCATCTCTACCATTGAAAGGGTCATCATTCAGGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGATTTACTGCACCAATGAAGCCTACTGATATTGGAAGCAGTGCTAGATTCGAACCGGGTCATATAGGCATGCCGATTTTCTTGGACGACGATGAAGCGGAGGTTATGTGGCCAGGTAGTTTTCGTCCAACGGCAGAAACTAGAAACACTCATGAACTAACTCAACCAAGTTTCATACTAACTGGTATTTCAAGAATAAGCTCAATGGATAAAGTGTCGTCGGAGGATGTAGAAGACTCGACGCCTGATCTCACGCTCAAACTCTAA
BLAST of CmoCh01G003460 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 126/288 (43.75%), Postives = 158/288 (54.86%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60
           M+P LDLE E   A+    SSQVASN+S                  PV     +K + L+
Sbjct: 1   MRPILDLEIE---ASSGSSSSQVASNLS------------------PVGED--YKPISLN 60

Query: 61  LTLNFNIE-----DLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFS 120
           L+L+FN       DLE+   T   LSSTSESSN         +   RVFSCN+CQRKF+S
Sbjct: 61  LSLSFNNNNNNNLDLESSSLT-LPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYS 120

Query: 121 SQALGGHQNAHKRERTLAKRAMRMGI--------------LAERYANLASLPLKGS---- 180
           SQALGGHQNAHKRERTLAKRAMRMG+               A   A L+ LPL GS    
Sbjct: 121 SQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGN 180

Query: 181 --SFRSLGIKAHSSLLH-GFTAPMKPTDIGSSARFEPGHIG--MPIFLDDDEAEVMWPGS 240
             SFR+LGI+AHSS      T     T I + ARF  G+ G  +P +++DDEAE++WPGS
Sbjct: 181 MTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGS 240

Query: 241 FRPTAETRNTHELTQPSFILTGISRISSMDKVSSEDVEDSTPDLTLKL 261
           FR   +  N   +   +  L G  ++  +D   + D+E S PDLTLKL
Sbjct: 241 FR---QATNAVAVEAGNDNL-GERKMDFLDVKQAMDMESSLPDLTLKL 260

BLAST of CmoCh01G003460 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.2e-24
Identity = 79/200 (39.50%), Postives = 106/200 (53.00%), Query Frame = 1

Query: 68  EDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHK 127
           +DL   +S   SL      +       T   A PRVFSCN+C+RKF+SSQALGGHQNAHK
Sbjct: 23  QDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHK 82

Query: 128 RERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKPTDIGSSA 187
           RERT+AKRAM MG +   +      P   +S  SLG++AHS LLH   +  +P     S 
Sbjct: 83  RERTMAKRAMHMGRMFGHHHR----PYTYTS-SSLGMQAHSGLLHHTLSQPQPL---VSR 142

Query: 188 RFEPGHIG--MPIFLDDDE--AEVMWPGSFRPTAETRNTHELTQPSFILTGISRISSMDK 247
               G+ G  +P+F D D+  ++  WPGSFR   E     E   P  ++        ++ 
Sbjct: 143 FHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVE-----EAEAPVVVVASTESGLDLNS 202

Query: 248 VSSE---DVEDSTPDLTLKL 261
           V++    D   S PDLTL+L
Sbjct: 203 VAANGGVDNNSSKPDLTLRL 209

BLAST of CmoCh01G003460 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.9e-17
Identity = 62/131 (47.33%), Postives = 76/131 (58.02%), Query Frame = 1

Query: 60  DLTLNFNIEDLETRDSTGFSLSS---TSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSS 119
           DL L   +    T  S+  +L     TS SS     H     A PRVFSCN+CQRKF+SS
Sbjct: 21  DLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSS 80

Query: 120 QALGGHQNAHKRERTLAKRA----MRMGIL-----------AERYANLASLPLKGS--SF 171
           QALGGHQNAHKRERTLAKR     M +  L             R+A++ASLPL GS  + 
Sbjct: 81  QALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNR 140

BLAST of CmoCh01G003460 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 1

Query: 62  TLNFNIEDLETRDSTGFS--------LSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKF 121
           +LN +IED E RD    S        +  T+   NE T      +   ++FSCN+CQR F
Sbjct: 17  SLNQSIED-EERDVHNSSHELNLIDCIDDTTSIVNEST-----TSTEQKLFSCNYCQRTF 76

Query: 122 FSSQALGGHQNAHKRERTLAKRAMRMGILAERYAN---LASLPLKG--SSFRSLGIKAHS 169
           +SSQALGGHQNAHKRERTLAKR  RM   A  + +    + LP  G  ++ RSLGI+AHS
Sbjct: 77  YSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS 130

BLAST of CmoCh01G003460 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 1

Query: 81  SSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHKRERTLAKRAMRM 140
           SS+S S+N  +C        PRVFSCN+CQRKF+SSQALGGHQNAHK ERTLAK++  +
Sbjct: 34  SSSSSSTNSSSCLEQ-----PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

BLAST of CmoCh01G003460 vs. TrEMBL
Match: A0A0A0LBR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G196420 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.7e-104
Identity = 222/272 (81.62%), Postives = 238/272 (87.50%), Query Frame = 1

Query: 1   MKPFLDLEKEPS-LANDSDISSQVASN--IS-LHENSDDNSLITNS-FLANP---VAAQP 60
           MKPFLDLEKEPS LANDSDISSQVAS+  IS LHENS+DNSLITNS F ANP    A QP
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFFANPNIPAADQP 60

Query: 61  GFKSVCLDLTLNFNIEDLETR-DSTGFSLSSTS-ESSNEPTCHPTAAAAIPRVFSCNFCQ 120
           GF+SVCLDLTLNFNIED+ETR DSTGFSLS+TS +SSNEPT    A  A+PRVFSCN+CQ
Sbjct: 61  GFESVCLDLTLNFNIEDIETRPDSTGFSLSTTSDQSSNEPTA--CATMAVPRVFSCNYCQ 120

Query: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSL 180
           RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYA+LASLPLKGSSF+SLGIKAHSSL
Sbjct: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSL 180

Query: 181 LHGFTAPMKPTDIGSSARF--EPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQP 240
           LHG  APMKP +I SSARF  EPG+IGMPIFL+DDE EVMWPGSFRP  ETRNT ELT+P
Sbjct: 181 LHGIAAPMKPNEIRSSARFEPEPGYIGMPIFLEDDETEVMWPGSFRPMVETRNTDELTRP 240

Query: 241 SFILTGISRISSMDKVSSEDVEDSTPDLTLKL 261
           SFILTGIS ISS DK + EDVE+ST DLTLKL
Sbjct: 241 SFILTGISSISSADK-TWEDVENSTLDLTLKL 269

BLAST of CmoCh01G003460 vs. TrEMBL
Match: M5WUY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010261mg PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.3e-77
Identity = 167/262 (63.74%), Postives = 198/262 (75.57%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60
           M  + DLE E S ANDSD+SSQVASNIS+ E S + S  + +   NP+AAQ   + V LD
Sbjct: 1   MNTYFDLEVEASSANDSDVSSQVASNISIQETSANTSNDSAANSTNPIAAQQALEPVSLD 60

Query: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120
           LTL+F+ EDL  RDS GFSLSSTSESSNEP    T AA  PR+FSCN+CQ KF SSQALG
Sbjct: 61  LTLSFSNEDLVGRDSVGFSLSSTSESSNEPASQNTTAAT-PRLFSCNYCQCKFLSSQALG 120

Query: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180
           GHQNAHK+ERTLAKRA+RM I +ERY ++ASLPL GSSFRSLGI+AHSS+  GF  P++P
Sbjct: 121 GHQNAHKKERTLAKRALRMSIFSERYTSIASLPLHGSSFRSLGIEAHSSVHQGFAPPVRP 180

Query: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILTGISRISS 240
            +IGSSARFE G++G+PIFL DD AE++WPGSFR  AET NTH    PSF+LT  S  S+
Sbjct: 181 AEIGSSARFEQGYLGVPIFLVDDGAELLWPGSFRRAAETSNTH----PSFVLTHESSNSN 240

Query: 241 MDKVSSE-DVE-DSTPDLTLKL 261
             +V+   DVE  STPDLTLKL
Sbjct: 241 FVEVTPPVDVETKSTPDLTLKL 257

BLAST of CmoCh01G003460 vs. TrEMBL
Match: A0A067JPD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22548 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.0e-77
Identity = 163/267 (61.05%), Postives = 202/267 (75.66%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENS---DDNSLITNSFLANPVA-AQPGFKS 60
           MKP +DLE E SL NDS++SSQVASN+S+HENS    ++SL  +S + NP+  AQ   ++
Sbjct: 1   MKPTIDLEVEASLENDSEVSSQVASNLSIHENSVGPSNDSLTNSSNITNPILLAQSSSET 60

Query: 61  VCLDLTLNFNIEDLETR---DSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKF 120
           + LDLTL  N ++L  R   DS GFSLSSTSESSNEP  H T+ AAIPRVFSCN+CQRKF
Sbjct: 61  LSLDLTLCLNNDELVDRGVKDSIGFSLSSTSESSNEPATH-TSTAAIPRVFSCNYCQRKF 120

Query: 121 FSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHG 180
           FSSQALGGHQNAHKRERTLAKRAMRMGI +ERY NLASLPL GSSFRSLGIKAHSSL   
Sbjct: 121 FSSQALGGHQNAHKRERTLAKRAMRMGIFSERYVNLASLPLHGSSFRSLGIKAHSSLHQN 180

Query: 181 FTAPMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILT 240
            +  ++P DI +SARF+  ++G+P F++DDEAE++WPGSFR   E  +T    +  F+LT
Sbjct: 181 VSTTIRPQDIRNSARFDQSYLGLPFFMEDDEAELLWPGSFRQITEAEDTTH--EQRFVLT 240

Query: 241 GISRISSMDKVSSEDVEDSTPDLTLKL 261
           G S ++   +  + D+ +STPDLTLKL
Sbjct: 241 GASNMNFFGENPAADLANSTPDLTLKL 264

BLAST of CmoCh01G003460 vs. TrEMBL
Match: U5FH75_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02490g PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.5e-76
Identity = 160/263 (60.84%), Postives = 196/263 (74.52%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENS---DDNSLITNSFLANPVAAQPGFKSV 60
           MKP +DLE E S  N SD+SSQVASN+S  E S    + SL  +S+L N +A Q G ++V
Sbjct: 1   MKPIIDLEVEASSENVSDVSSQVASNLSNQETSAGPSNESLTNSSYLKNAIATQSGSETV 60

Query: 61  CLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQ 120
            LDL L FN ++L  RDS G SLSSTSESSN+P    T A AIPRVFSCN+CQRKFFSSQ
Sbjct: 61  SLDLKLCFNDDELGGRDSMGLSLSSTSESSNDPASR-TTAEAIPRVFSCNYCQRKFFSSQ 120

Query: 121 ALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAP 180
           ALGGHQNAHKRERTLAKRA+RMGI +ERYA+LASLPL GSSFRSLGIKAHSS+   F  P
Sbjct: 121 ALGGHQNAHKRERTLAKRAIRMGIFSERYASLASLPLHGSSFRSLGIKAHSSVHQSFAQP 180

Query: 181 MKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILTGISR 240
           ++P DI SSARF+ G++G+PIF++D+EAE++WPGSFR  A   + H+    SF+L   S 
Sbjct: 181 VRPQDISSSARFDHGYVGLPIFMEDEEAELVWPGSFRQVAVADDAHQ----SFVLARSSN 240

Query: 241 ISSMDKVSSEDVEDSTPDLTLKL 261
           ++ +    S + +DS PDLTLKL
Sbjct: 241 MNFLGATPSVNSDDSAPDLTLKL 258

BLAST of CmoCh01G003460 vs. TrEMBL
Match: B9T5L7_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0241910 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-75
Identity = 159/261 (60.92%), Postives = 197/261 (75.48%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAA-QPGFKSVCL 60
           MKP +DLE E S  NDS++SSQVASN+  HE S ++SL  +S L N  +A Q G + V L
Sbjct: 1   MKPNIDLEVEASSENDSEVSSQVASNLCTHEISANDSLTNSSNLTNAASADQSGSEPVSL 60

Query: 61  DLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQAL 120
           DLTL FN ++   RDS GFSLSSTSESSNEP    T  AAIPRVFSCN+CQRKFFSSQAL
Sbjct: 61  DLTLCFNKDESGRRDSVGFSLSSTSESSNEPPSL-TTPAAIPRVFSCNYCQRKFFSSQAL 120

Query: 121 GGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMK 180
           GGHQNAHKRERTLAKRAMRMGI +ERY +L+SLPL GSSFR+LGIKAHSS    F  P++
Sbjct: 121 GGHQNAHKRERTLAKRAMRMGIFSERYVSLSSLPLHGSSFRNLGIKAHSSGHQNFAPPLR 180

Query: 181 PTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILTGISRIS 240
           P +I +SA+F+ G++ +PIF++DDEAE++WPGSFR  +E  +T+    P F+LTG S  +
Sbjct: 181 PQEIRNSAKFDQGYLSLPIFVEDDEAELLWPGSFRQVSEADDTN----PRFVLTGNSNEN 240

Query: 241 SMDKVSSEDVEDSTPDLTLKL 261
            ++   S D+ +S PDLTLKL
Sbjct: 241 FLEAAPSADLNNSMPDLTLKL 256

BLAST of CmoCh01G003460 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 164.5 bits (415), Expect = 8.9e-41
Identity = 126/288 (43.75%), Postives = 158/288 (54.86%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60
           M+P LDLE E   A+    SSQVASN+S                  PV     +K + L+
Sbjct: 1   MRPILDLEIE---ASSGSSSSQVASNLS------------------PVGED--YKPISLN 60

Query: 61  LTLNFNIE-----DLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFS 120
           L+L+FN       DLE+   T   LSSTSESSN         +   RVFSCN+CQRKF+S
Sbjct: 61  LSLSFNNNNNNNLDLESSSLT-LPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYS 120

Query: 121 SQALGGHQNAHKRERTLAKRAMRMGI--------------LAERYANLASLPLKGS---- 180
           SQALGGHQNAHKRERTLAKRAMRMG+               A   A L+ LPL GS    
Sbjct: 121 SQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGN 180

Query: 181 --SFRSLGIKAHSSLLH-GFTAPMKPTDIGSSARFEPGHIG--MPIFLDDDEAEVMWPGS 240
             SFR+LGI+AHSS      T     T I + ARF  G+ G  +P +++DDEAE++WPGS
Sbjct: 181 MTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGS 240

Query: 241 FRPTAETRNTHELTQPSFILTGISRISSMDKVSSEDVEDSTPDLTLKL 261
           FR   +  N   +   +  L G  ++  +D   + D+E S PDLTLKL
Sbjct: 241 FR---QATNAVAVEAGNDNL-GERKMDFLDVKQAMDMESSLPDLTLKL 260

BLAST of CmoCh01G003460 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-25
Identity = 79/200 (39.50%), Postives = 106/200 (53.00%), Query Frame = 1

Query: 68  EDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHK 127
           +DL   +S   SL      +       T   A PRVFSCN+C+RKF+SSQALGGHQNAHK
Sbjct: 23  QDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHK 82

Query: 128 RERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKPTDIGSSA 187
           RERT+AKRAM MG +   +      P   +S  SLG++AHS LLH   +  +P     S 
Sbjct: 83  RERTMAKRAMHMGRMFGHHHR----PYTYTS-SSLGMQAHSGLLHHTLSQPQPL---VSR 142

Query: 188 RFEPGHIG--MPIFLDDDE--AEVMWPGSFRPTAETRNTHELTQPSFILTGISRISSMDK 247
               G+ G  +P+F D D+  ++  WPGSFR   E     E   P  ++        ++ 
Sbjct: 143 FHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVE-----EAEAPVVVVASTESGLDLNS 202

Query: 248 VSSE---DVEDSTPDLTLKL 261
           V++    D   S PDLTL+L
Sbjct: 203 VAANGGVDNNSSKPDLTLRL 209

BLAST of CmoCh01G003460 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 62/131 (47.33%), Postives = 76/131 (58.02%), Query Frame = 1

Query: 60  DLTLNFNIEDLETRDSTGFSLSS---TSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSS 119
           DL L   +    T  S+  +L     TS SS     H     A PRVFSCN+CQRKF+SS
Sbjct: 21  DLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSS 80

Query: 120 QALGGHQNAHKRERTLAKRA----MRMGIL-----------AERYANLASLPLKGS--SF 171
           QALGGHQNAHKRERTLAKR     M +  L             R+A++ASLPL GS  + 
Sbjct: 81  QALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNR 140

BLAST of CmoCh01G003460 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 82.0 bits (201), Expect = 5.8e-16
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 1

Query: 62  TLNFNIEDLETRDSTGFS--------LSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKF 121
           +LN +IED E RD    S        +  T+   NE T      +   ++FSCN+CQR F
Sbjct: 17  SLNQSIED-EERDVHNSSHELNLIDCIDDTTSIVNEST-----TSTEQKLFSCNYCQRTF 76

Query: 122 FSSQALGGHQNAHKRERTLAKRAMRMGILAERYAN---LASLPLKG--SSFRSLGIKAHS 169
           +SSQALGGHQNAHKRERTLAKR  RM   A  + +    + LP  G  ++ RSLGI+AHS
Sbjct: 77  YSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS 130

BLAST of CmoCh01G003460 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-14
Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 1

Query: 17  SDISSQVASNISLHENSDDNSLITNSFLANPVAAQP--------GFKSVCLDLTLNFNIE 76
           SD S  ++++ SL + SD   L   ++  + VAAQ         G + + LDL L    +
Sbjct: 11  SDSSCIISASTSL-QFSDSPKLSLENYNIDTVAAQEEDDHDQKEGVEGIKLDLMLA-GYD 70

Query: 77  DLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHKR 136
             + + +   +L    E+         + +   ++FSCN+CQR F+SSQALGGHQNAHKR
Sbjct: 71  SSQPQLNQELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKR 130

Query: 137 ERTLAKRAMRMGILAE--RYANLASLPLKGS-SFRSLGIKAHS 169
           ERTLAKR  RM   A        A +P  G  S R+LGI+AHS
Sbjct: 131 ERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHS 171

BLAST of CmoCh01G003460 vs. NCBI nr
Match: gi|659112391|ref|XP_008456195.1| (PREDICTED: zinc finger protein 4-like [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 1.7e-105
Identity = 223/272 (81.99%), Postives = 241/272 (88.60%), Query Frame = 1

Query: 1   MKPFLDLEKEPS-LANDSDISSQVASN--IS-LHENSDDNSLITNS-FLANP---VAAQP 60
           MKPFLDLEKEPS LANDSDISSQVAS+  IS LHENS+DNSLITNS FLANP    A QP
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFLANPNIPAADQP 60

Query: 61  GFKSVCLDLTLNFNIEDLETR-DSTGFSLSSTS-ESSNEPTCHPTAAAAIPRVFSCNFCQ 120
           GF+SVCL+LTLNFNIEDLETR DSTGFSLSSTS +SSNEPT    A  A+PRVFSCN+CQ
Sbjct: 61  GFESVCLELTLNFNIEDLETRPDSTGFSLSSTSDQSSNEPTA--CATMAVPRVFSCNYCQ 120

Query: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSL 180
           RKFFSSQALGGHQNAHKRERTLAKRAMRMGILA+RY +LASLPLKGSSF+SLGIKAHSSL
Sbjct: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILADRYVSLASLPLKGSSFKSLGIKAHSSL 180

Query: 181 LHGFTAPMKPTDIGSSARF--EPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQP 240
           LHG  APMKP +I SSARF  EPG+IGMP+FL+DDEAEVMWPGSFRP  ETR+THELT+P
Sbjct: 181 LHGVAAPMKPNEIRSSARFEPEPGYIGMPLFLEDDEAEVMWPGSFRPMVETRSTHELTRP 240

Query: 241 SFILTGISRISSMDKVSSEDVEDSTPDLTLKL 261
           SFILTGIS ISS DK +SEDVE+ST DLTLKL
Sbjct: 241 SFILTGISSISSADK-TSEDVENSTLDLTLKL 269

BLAST of CmoCh01G003460 vs. NCBI nr
Match: gi|449446113|ref|XP_004140816.1| (PREDICTED: zinc finger protein 4-like [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 2.4e-104
Identity = 222/272 (81.62%), Postives = 238/272 (87.50%), Query Frame = 1

Query: 1   MKPFLDLEKEPS-LANDSDISSQVASN--IS-LHENSDDNSLITNS-FLANP---VAAQP 60
           MKPFLDLEKEPS LANDSDISSQVAS+  IS LHENS+DNSLITNS F ANP    A QP
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFFANPNIPAADQP 60

Query: 61  GFKSVCLDLTLNFNIEDLETR-DSTGFSLSSTS-ESSNEPTCHPTAAAAIPRVFSCNFCQ 120
           GF+SVCLDLTLNFNIED+ETR DSTGFSLS+TS +SSNEPT    A  A+PRVFSCN+CQ
Sbjct: 61  GFESVCLDLTLNFNIEDIETRPDSTGFSLSTTSDQSSNEPTA--CATMAVPRVFSCNYCQ 120

Query: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSL 180
           RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYA+LASLPLKGSSF+SLGIKAHSSL
Sbjct: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSL 180

Query: 181 LHGFTAPMKPTDIGSSARF--EPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQP 240
           LHG  APMKP +I SSARF  EPG+IGMPIFL+DDE EVMWPGSFRP  ETRNT ELT+P
Sbjct: 181 LHGIAAPMKPNEIRSSARFEPEPGYIGMPIFLEDDETEVMWPGSFRPMVETRNTDELTRP 240

Query: 241 SFILTGISRISSMDKVSSEDVEDSTPDLTLKL 261
           SFILTGIS ISS DK + EDVE+ST DLTLKL
Sbjct: 241 SFILTGISSISSADK-TWEDVENSTLDLTLKL 269

BLAST of CmoCh01G003460 vs. NCBI nr
Match: gi|1009126354|ref|XP_015880109.1| (PREDICTED: zinc finger protein 4-like [Ziziphus jujuba])

HSP 1 Score: 327.8 bits (839), Expect = 1.7e-86
Identity = 175/263 (66.54%), Postives = 207/263 (78.71%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENS---DDNSLITNSFLANPVAAQPGFKSV 60
           MK   DLE E SLANDSD+SSQVASN+S+ E S    + SL  +S LAN   AQPG + V
Sbjct: 1   MKATFDLEVEASLANDSDVSSQVASNVSIQETSAGSSNESLTNSSHLANLTTAQPGLEQV 60

Query: 61  CLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQ 120
           CLDLTL FN ED   RDS G SLSSTSESSNEP+ H TAAA IPRVFSCN+CQRKFFSSQ
Sbjct: 61  CLDLTLQFNNEDFGGRDSIGLSLSSTSESSNEPSSHNTAAA-IPRVFSCNYCQRKFFSSQ 120

Query: 121 ALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAP 180
           ALGGHQNAHKRERTLAKRAMRM I +E+YA LASLP+ GSSFRSLGIKAHSS+  G    
Sbjct: 121 ALGGHQNAHKRERTLAKRAMRMSIFSEKYAGLASLPIHGSSFRSLGIKAHSSVHDGIAPL 180

Query: 181 MKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILTGISR 240
           ++P+DI +SARFE G++G+PIFL+DDEAE++WPGSFR  AET +T+  T P F+LTG S 
Sbjct: 181 VRPSDIRTSARFEQGYLGVPIFLEDDEAELLWPGSFRQVAETNSTN--TLPGFVLTGSSN 240

Query: 241 ISSMDKVSSEDVEDSTPDLTLKL 261
           ++ ++   + D++DSTPDLTLKL
Sbjct: 241 LNFVEVTPTADIDDSTPDLTLKL 260

BLAST of CmoCh01G003460 vs. NCBI nr
Match: gi|595940924|ref|XP_007215847.1| (hypothetical protein PRUPE_ppa010261mg [Prunus persica])

HSP 1 Score: 297.0 bits (759), Expect = 3.3e-77
Identity = 167/262 (63.74%), Postives = 198/262 (75.57%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60
           M  + DLE E S ANDSD+SSQVASNIS+ E S + S  + +   NP+AAQ   + V LD
Sbjct: 1   MNTYFDLEVEASSANDSDVSSQVASNISIQETSANTSNDSAANSTNPIAAQQALEPVSLD 60

Query: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120
           LTL+F+ EDL  RDS GFSLSSTSESSNEP    T AA  PR+FSCN+CQ KF SSQALG
Sbjct: 61  LTLSFSNEDLVGRDSVGFSLSSTSESSNEPASQNTTAAT-PRLFSCNYCQCKFLSSQALG 120

Query: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180
           GHQNAHK+ERTLAKRA+RM I +ERY ++ASLPL GSSFRSLGI+AHSS+  GF  P++P
Sbjct: 121 GHQNAHKKERTLAKRALRMSIFSERYTSIASLPLHGSSFRSLGIEAHSSVHQGFAPPVRP 180

Query: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILTGISRISS 240
            +IGSSARFE G++G+PIFL DD AE++WPGSFR  AET NTH    PSF+LT  S  S+
Sbjct: 181 AEIGSSARFEQGYLGVPIFLVDDGAELLWPGSFRRAAETSNTH----PSFVLTHESSNSN 240

Query: 241 MDKVSSE-DVE-DSTPDLTLKL 261
             +V+   DVE  STPDLTLKL
Sbjct: 241 FVEVTPPVDVETKSTPDLTLKL 257

BLAST of CmoCh01G003460 vs. NCBI nr
Match: gi|802732686|ref|XP_012086449.1| (PREDICTED: zinc finger protein 4 [Jatropha curcas])

HSP 1 Score: 296.6 bits (758), Expect = 4.3e-77
Identity = 163/267 (61.05%), Postives = 202/267 (75.66%), Query Frame = 1

Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENS---DDNSLITNSFLANPVA-AQPGFKS 60
           MKP +DLE E SL NDS++SSQVASN+S+HENS    ++SL  +S + NP+  AQ   ++
Sbjct: 1   MKPTIDLEVEASLENDSEVSSQVASNLSIHENSVGPSNDSLTNSSNITNPILLAQSSSET 60

Query: 61  VCLDLTLNFNIEDLETR---DSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKF 120
           + LDLTL  N ++L  R   DS GFSLSSTSESSNEP  H T+ AAIPRVFSCN+CQRKF
Sbjct: 61  LSLDLTLCLNNDELVDRGVKDSIGFSLSSTSESSNEPATH-TSTAAIPRVFSCNYCQRKF 120

Query: 121 FSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHG 180
           FSSQALGGHQNAHKRERTLAKRAMRMGI +ERY NLASLPL GSSFRSLGIKAHSSL   
Sbjct: 121 FSSQALGGHQNAHKRERTLAKRAMRMGIFSERYVNLASLPLHGSSFRSLGIKAHSSLHQN 180

Query: 181 FTAPMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILT 240
            +  ++P DI +SARF+  ++G+P F++DDEAE++WPGSFR   E  +T    +  F+LT
Sbjct: 181 VSTTIRPQDIRNSARFDQSYLGLPFFMEDDEAELLWPGSFRQITEAEDTTH--EQRFVLT 240

Query: 241 GISRISSMDKVSSEDVEDSTPDLTLKL 261
           G S ++   +  + D+ +STPDLTLKL
Sbjct: 241 GASNMNFFGENPAADLANSTPDLTLKL 264

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ZFP4_ARATH1.6e-3943.75Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
ZFP7_ARATH7.2e-2439.50Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP1_ARATH2.9e-1747.33Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP3_ARATH1.0e-1446.67Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP2_ARATH4.8e-1262.71Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LBR9_CUCSA1.7e-10481.62Uncharacterized protein OS=Cucumis sativus GN=Csa_3G196420 PE=4 SV=1[more]
M5WUY8_PRUPE2.3e-7763.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010261mg PE=4 SV=1[more]
A0A067JPD7_JATCU3.0e-7761.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22548 PE=4 SV=1[more]
U5FH75_POPTR2.5e-7660.84Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02490g PE=4 SV=1[more]
B9T5L7_RICCO1.6e-7560.92Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0241910 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G66140.18.9e-4143.75 zinc finger protein 4[more]
AT1G24625.14.0e-2539.50 zinc finger protein 7[more]
AT1G80730.11.6e-1847.33 zinc-finger protein 1[more]
AT5G25160.15.8e-1646.67 zinc finger protein 3[more]
AT5G10970.12.5e-1438.04 C2H2 and C2HC zinc fingers superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659112391|ref|XP_008456195.1|1.7e-10581.99PREDICTED: zinc finger protein 4-like [Cucumis melo][more]
gi|449446113|ref|XP_004140816.1|2.4e-10481.62PREDICTED: zinc finger protein 4-like [Cucumis sativus][more]
gi|1009126354|ref|XP_015880109.1|1.7e-8666.54PREDICTED: zinc finger protein 4-like [Ziziphus jujuba][more]
gi|595940924|ref|XP_007215847.1|3.3e-7763.74hypothetical protein PRUPE_ppa010261mg [Prunus persica][more]
gi|802732686|ref|XP_012086449.1|4.3e-7761.05PREDICTED: zinc finger protein 4 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G003460.1CmoCh01G003460.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 106..126
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 104..131
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 102..131
score: 4.7