Carg07422 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07422
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger protein 4-like
Location	Cucurbita_argyrosperma_scaffold_019 : 710061 .. 710870 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCTTTGGCAAATGATTCTGACATAAGTAGCCAAGTTGCTTCCAACATTTCCCTCCATGAAAATTCTGATGATAATAGCCTCATAACTAACTCCTTTCTTGCTAACCCCGTTGCTGCTCAACCAGGATTCAAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGAAGATCTCGAAACTCGGGATTCGACAGGATTTTCATTGTCAAGCACAAGTGAGAGTAGCAATGAACCAACATGCCACCCCACAGCAGCTGCTGCTATCCCAAGAGTGTTTTCTTGCAACTTCTGTCAGCGCAAGTTCTTTAGTTCGCAAGCTCTTGGCGGCCACCAGAACGCGCATAAGCGCGAGCGAACCTTGGCGAAACGGGCAATGCGTATGGGGATTCTAGCAGAAAGATATGCAAATCTAGCATCTCTACCATTGAAAGGGTCATCATTCAGGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGATTTACTGCACCAATGAAGCCTACTGATATTGGAAGCAGTGCTAGATTCGAACCGGGTCATATAGGCATGCCGATTTTCTTGGACGACGATGAAGCGGAGGTTATGTGGCCAGGTAGTTTTCGTCCAATGGCAGAAACTAGAAACACTCATGAACTAACTCAACCAAGTTTCATACTAACTGGTATTTCAAGAATAAGCTCAATGGATAAAGTGTCGTCGGAGGACGTAGAAGACTCGACGCCTGATCTCAACGTAGAAGACTCGACGCCTGATCTCACGCTCAAACTCTAA

mRNA sequence

ATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCTTTGGCAAATGATTCTGACATAAGTAGCCAAGTTGCTTCCAACATTTCCCTCCATGAAAATTCTGATGATAATAGCCTCATAACTAACTCCTTTCTTGCTAACCCCGTTGCTGCTCAACCAGGATTCAAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGAAGATCTCGAAACTCGGGATTCGACAGGATTTTCATTGTCAAGCACAAGTGAGAGTAGCAATGAACCAACATGCCACCCCACAGCAGCTGCTGCTATCCCAAGAGTGTTTTCTTGCAACTTCTGTCAGCGCAAGTTCTTTAGTTCGCAAGCTCTTGGCGGCCACCAGAACGCGCATAAGCGCGAGCGAACCTTGGCGAAACGGGCAATGCGTATGGGGATTCTAGCAGAAAGATATGCAAATCTAGCATCTCTACCATTGAAAGGGTCATCATTCAGGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGATTTACTGCACCAATGAAGCCTACTGATATTGGAAGCAGTGCTAGATTCGAACCGGGTCATATAGGCATGCCGATTTTCTTGGACGACGATGAAGCGGAGGTTATGTGGCCAGGTAGTTTTCGTCCAATGGCAGAAACTAGAAACACTCATGAACTAACTCAACCAAGTTTCATACTAACTGGTATTTCAAGAATAAGCTCAATGGATAAAGTGTCGTCGGAGGACGTAGAAGACTCGACGCCTGATCTCAACGTAGAAGACTCGACGCCTGATCTCACGCTCAAACTCTAA

Coding sequence (CDS)

ATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCTTTGGCAAATGATTCTGACATAAGTAGCCAAGTTGCTTCCAACATTTCCCTCCATGAAAATTCTGATGATAATAGCCTCATAACTAACTCCTTTCTTGCTAACCCCGTTGCTGCTCAACCAGGATTCAAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGAAGATCTCGAAACTCGGGATTCGACAGGATTTTCATTGTCAAGCACAAGTGAGAGTAGCAATGAACCAACATGCCACCCCACAGCAGCTGCTGCTATCCCAAGAGTGTTTTCTTGCAACTTCTGTCAGCGCAAGTTCTTTAGTTCGCAAGCTCTTGGCGGCCACCAGAACGCGCATAAGCGCGAGCGAACCTTGGCGAAACGGGCAATGCGTATGGGGATTCTAGCAGAAAGATATGCAAATCTAGCATCTCTACCATTGAAAGGGTCATCATTCAGGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGATTTACTGCACCAATGAAGCCTACTGATATTGGAAGCAGTGCTAGATTCGAACCGGGTCATATAGGCATGCCGATTTTCTTGGACGACGATGAAGCGGAGGTTATGTGGCCAGGTAGTTTTCGTCCAATGGCAGAAACTAGAAACACTCATGAACTAACTCAACCAAGTTTCATACTAACTGGTATTTCAAGAATAAGCTCAATGGATAAAGTGTCGTCGGAGGACGTAGAAGACTCGACGCCTGATCTCAACGTAGAAGACTCGACGCCTGATCTCACGCTCAAACTCTAA

Protein sequence

MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGISRISSMDKVSSEDVEDSTPDLNVEDSTPDLTLKL

Homology

[Close]

BLAST of Carg07422 vs. NCBI nr
Match: XP_022948481.1 (zinc finger protein 4-like isoform X1 [Cucurbita moschata] >XP_022948482.1 zinc finger protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 490.0 bits (1260), Expect = 5.3e-135
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60
           MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD
Sbjct: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60

Query: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120
           LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG
Sbjct: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120

Query: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180
           GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP
Sbjct: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180

Query: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGISRISS 240
           TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRP AETRNTHELTQPSFILTGISRISS
Sbjct: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFILTGISRISS 240

Query: 241 MDKVSSEDVE 251
           MDKVSSEDVE
Sbjct: 241 MDKVSSEDVE 250

[Close]

BLAST of Carg07422 vs. NCBI nr
Match: XP_023525082.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023525083.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.6 bits (1246), Expect = 2.2e-133
Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60
           MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSV LD
Sbjct: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVSLD 60

Query: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120
           LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG
Sbjct: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120

Query: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180
           GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP
Sbjct: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180

Query: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGISRISS 240
           TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRP  ETRNTHELTQPSFILTGISRISS
Sbjct: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTVETRNTHELTQPSFILTGISRISS 240

Query: 241 MDKVSSEDVE 251
           MDKVSSEDVE
Sbjct: 241 MDKVSSEDVE 250

[Close]

BLAST of Carg07422 vs. NCBI nr
Match: XP_022998251.1 (zinc finger protein 4-like isoform X1 [Cucurbita maxima] >XP_022998252.1 zinc finger protein 4-like isoform X1 [Cucurbita maxima] >XP_022998253.1 zinc finger protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 481.1 bits (1237), Expect = 2.5e-132
Identity = 246/250 (98.40%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60
           MKPFLDLEKEPSLA DSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD
Sbjct: 1   MKPFLDLEKEPSLAIDSDISSQVASNISLHENSDDNSLITNSFLANPVAAQPGFKSVCLD 60

Query: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120
           LTLNFNIEDLETRDSTGFSLSSTSESSNEP+CHPTAAAAIPRVFSCNFCQRKFFSSQALG
Sbjct: 61  LTLNFNIEDLETRDSTGFSLSSTSESSNEPSCHPTAAAAIPRVFSCNFCQRKFFSSQALG 120

Query: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180
           GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP
Sbjct: 121 GHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKP 180

Query: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGISRISS 240
           TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNT ELTQPSFILTGISRISS
Sbjct: 181 TDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTPELTQPSFILTGISRISS 240

Query: 241 MDKVSSEDVE 251
           MDKVS EDVE
Sbjct: 241 MDKVSLEDVE 250

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BLAST of Carg07422 vs. NCBI nr
Match: XP_022143386.1 (zinc finger protein 4-like [Momordica charantia] >XP_022143387.1 zinc finger protein 4-like [Momordica charantia] >XP_022143388.1 zinc finger protein 4-like [Momordica charantia] >XP_022143389.1 zinc finger protein 4-like [Momordica charantia])

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 208/253 (82.21%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MKPF-LDLEKEPSLANDSDI-SSQVASNISLHENSDDNSLIT-NSFLANPVAAQPGFKSV 60
           MKPF LDLEKE S AND DI SSQVAS+ISLHENS+DNSLIT NSFL +P+AAQPGF+SV
Sbjct: 1   MKPFDLDLEKEASSANDCDITSSQVASSISLHENSNDNSLITNNSFLPDPIAAQPGFESV 60

Query: 61  CLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQ 120
           CLDLTLNFNIEDL T+DSTGFSLSSTSESSNEP  H T AAA+PRVFSCN+CQRKFFSSQ
Sbjct: 61  CLDLTLNFNIEDLGTQDSTGFSLSSTSESSNEPASH-TTAAAVPRVFSCNYCQRKFFSSQ 120

Query: 121 ALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAP 180
           ALGGHQNAHKRERTLAKRAMRMGILAERYA+LASLPLKGSSFRSLGIKAHSSLLHGFTAP
Sbjct: 121 ALGGHQNAHKRERTLAKRAMRMGILAERYASLASLPLKGSSFRSLGIKAHSSLLHGFTAP 180

Query: 181 MKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGISR 240
           MKP +I S+ARFEPG+IGMPIF++DD+AE++WPGSFRP AET N  ELTQPSF++TG+  
Sbjct: 181 MKPAEIRSTARFEPGYIGMPIFMEDDDAELLWPGSFRPTAETGNARELTQPSFVVTGVRS 240

Query: 241 ISSMDKVSSEDVE 251
           I S DK  SED+E
Sbjct: 241 IRSADKTPSEDIE 252

[Close]

BLAST of Carg07422 vs. NCBI nr
Match: XP_022948483.1 (zinc finger protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 393.7 bits (1010), Expect = 5.2e-106
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 53  GFKSVCLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRK 112
           GFKSVCLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRK
Sbjct: 3   GFKSVCLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRK 62

Query: 113 FFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLH 172
           FFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLH
Sbjct: 63  FFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLH 122

Query: 173 GFTAPMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFIL 232
           GFTAPMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRP AETRNTHELTQPSFIL
Sbjct: 123 GFTAPMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPTAETRNTHELTQPSFIL 182

Query: 233 TGISRISSMDKVSSEDVE 251
           TGISRISSMDKVSSEDVE
Sbjct: 183 TGISRISSMDKVSSEDVE 200

[Close]

BLAST of Carg07422 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4)

HSP 1 Score: 128.6 bits (322), Expect = 5.6e-30
Identity = 75/136 (55.15%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 102 RVFSCNFCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGI--------------LAERYA 161
           RVFSCN+CQRKF+SSQALGGHQNAHKRERTLAKRAMRMG+               A   A
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 162 NLASLPLKGS------SFRSLGIKAHSSLLH-GFTAPMKPTDIGSSARFEPGHIG--MPI 215
            L+ LPL GS      SFR+LGI+AHSS      T     T I + ARF  G+ G  +P 
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCIPF 202

[Close]

BLAST of Carg07422 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-23
Identity = 68/155 (43.87%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 68  EDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHK 127
           +DL   +S   SL      +       T   A PRVFSCN+C+RKF+SSQALGGHQNAHK
Sbjct: 23  QDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHK 82

Query: 128 RERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKPTDIGSSA 187
           RERT+AKRAM MG +   +      P   +S  SLG++AHS LLH   +  +P     S 
Sbjct: 83  RERTMAKRAMHMGRMFGHHHR----PYTYTS-SSLGMQAHSGLLHHTLSQPQPL---VSR 142

Query: 188 RFEPGHIG--MPIFLDDDE--AEVMWPGSFRPMAE 219
               G+ G  +P+F D D+  ++  WPGSFR + E
Sbjct: 143 FHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVE 169

[Close]

BLAST of Carg07422 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 99  AIPRVFSCNFCQRKFFSSQALGGHQNAHKRERTLAKRA----MRMGIL-----------A 158
           A PRVFSCN+CQRKF+SSQALGGHQNAHKRERTLAKR     M +  L            
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 159 ERYANLASLPLKGS--SFRSLGIKAHSSL 171
            R+A++ASLPL GS  +  +LGI+AHS++
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTI 151

[Close]

BLAST of Carg07422 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3)

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-16
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 62  TLNFNIEDLETRDSTGFS--------LSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKF 121
           +LN +IED E RD    S        +  T+   NE T      +   ++FSCN+CQR F
Sbjct: 17  SLNQSIED-EERDVHNSSHELNLIDCIDDTTSIVNEST-----TSTEQKLFSCNYCQRTF 76

Query: 122 FSSQALGGHQNAHKRERTLAKRAMRMGILAERYAN---LASLPLKG--SSFRSLGIKAHS 169
           +SSQALGGHQNAHKRERTLAKR  RM   A  + +    + LP  G  ++ RSLGI+AHS
Sbjct: 77  YSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS 130

[Close]

BLAST of Carg07422 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-14
Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 17  SDISSQVASNISLHENSDDNSLITNSFLANPVAAQ--------PGFKSVCLDLTLNFNIE 76
           SD S  ++++ SL + SD   L   ++  + VAAQ         G + + LDL L    +
Sbjct: 11  SDSSCIISASTSL-QFSDSPKLSLENYNIDTVAAQEEDDHDQKEGVEGIKLDLML-AGYD 70

Query: 77  DLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHKR 136
             + + +   +L    E+         + +   ++FSCN+CQR F+SSQALGGHQNAHKR
Sbjct: 71  SSQPQLNQELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKR 130

Query: 137 ERTLAKRAMRMGILAE--RYANLASLPLKGS-SFRSLGIKAHS 169
           ERTLAKR  RM   A        A +P  G  S R+LGI+AHS
Sbjct: 131 ERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHS 171

[Close]

BLAST of Carg07422 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28
Identity = 75/136 (55.15%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 102 RVFSCNFCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGI--------------LAERYA 161
           RVFSCN+CQRKF+SSQALGGHQNAHKRERTLAKRAMRMG+               A   A
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 162 NLASLPLKGS------SFRSLGIKAHSSLLH-GFTAPMKPTDIGSSARFEPGHIG--MPI 215
            L+ LPL GS      SFR+LGI+AHSS      T     T I + ARF  G+ G  +P 
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCIPF 202

[Close]

BLAST of Carg07422 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-22
Identity = 68/155 (43.87%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 68  EDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQALGGHQNAHK 127
           +DL   +S   SL      +       T   A PRVFSCN+C+RKF+SSQALGGHQNAHK
Sbjct: 23  QDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHK 82

Query: 128 RERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAPMKPTDIGSSA 187
           RERT+AKRAM MG +   +      P   +S  SLG++AHS LLH   +  +P     S 
Sbjct: 83  RERTMAKRAMHMGRMFGHHHR----PYTYTS-SSLGMQAHSGLLHHTLSQPQPL---VSR 142

Query: 188 RFEPGHIG--MPIFLDDDE--AEVMWPGSFRPMAE 219
               G+ G  +P+F D D+  ++  WPGSFR + E
Sbjct: 143 FHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVE 169

[Close]

BLAST of Carg07422 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 99  AIPRVFSCNFCQRKFFSSQALGGHQNAHKRERTLAKRA----MRMGIL-----------A 158
           A PRVFSCN+CQRKF+SSQALGGHQNAHKRERTLAKR     M +  L            
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 159 ERYANLASLPLKGS--SFRSLGIKAHSSL 171
            R+A++ASLPL GS  +  +LGI+AHS++
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTI 151

[Close]

BLAST of Carg07422 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 62  TLNFNIEDLETRDSTGFS--------LSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKF 121
           +LN +IED E RD    S        +  T+   NE T      +   ++FSCN+CQR F
Sbjct: 17  SLNQSIED-EERDVHNSSHELNLIDCIDDTTSIVNEST-----TSTEQKLFSCNYCQRTF 76

Query: 122 FSSQALGGHQNAHKRERTLAKRAMRMGILAERYAN---LASLPLKG--SSFRSLGIKAHS 169
           +SSQALGGHQNAHKRERTLAKR  RM   A  + +    + LP  G  ++ RSLGI+AHS
Sbjct: 77  YSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS 130

[Close]

BLAST of Carg07422 vs. Swiss-Prot
Match: sp|Q39261|ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-11
Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 0


Query: 101 PRVFSCNFCQRKFFSSQALGGHQNAHKRERTLAKRAMRM 140
           PRVFSCN+CQRKF+SSQALGGHQNAHK ERTLAK++  +
Sbjct: 49  PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

[Close]

BLAST of Carg07422 vs. TrEMBL
Match: tr|A0A1S3C2N5|A0A1S3C2N5_CUCME (zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103496205 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.3e-102
Identity = 214/262 (81.68%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 1   MKPFLDLEKEPS-LANDSDISSQVASN---ISLHENSDDNSLITN-SFLAN---PVAAQP 60
           MKPFLDLEKEPS LANDSDISSQVAS+     LHENS+DNSLITN SFLAN   P A QP
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFLANPNIPAADQP 60

Query: 61  GFKSVCLDLTLNFNIEDLETR-DSTGFSLSSTS-ESSNEPTCHPTAAAAIPRVFSCNFCQ 120
           GF+SVCL+LTLNFNIEDLETR DSTGFSLSSTS +SSNEPT    A  A+PRVFSCN+CQ
Sbjct: 61  GFESVCLELTLNFNIEDLETRPDSTGFSLSSTSDQSSNEPTA--CATMAVPRVFSCNYCQ 120

Query: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSL 180
           RKFFSSQALGGHQNAHKRERTLAKRAMRMGILA+RY +LASLPLKGSSF+SLGIKAHSSL
Sbjct: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILADRYVSLASLPLKGSSFKSLGIKAHSSL 180

Query: 181 LHGFTAPMKPTDIGSSARF--EPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQP 240
           LHG  APMKP +I SSARF  EPG+IGMP+FL+DDEAEVMWPGSFRPM ETR+THELT+P
Sbjct: 181 LHGVAAPMKPNEIRSSARFEPEPGYIGMPLFLEDDEAEVMWPGSFRPMVETRSTHELTRP 240

Query: 241 SFILTGISRISSMDKVSSEDVE 251
           SFILTGIS ISS DK +SEDVE
Sbjct: 241 SFILTGISSISSADK-TSEDVE 259

[Close]

BLAST of Carg07422 vs. TrEMBL
Match: tr|A0A0A0LBR9|A0A0A0LBR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G196420 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.9e-101
Identity = 213/262 (81.30%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MKPFLDLEKEPS-LANDSDISSQVASN---ISLHENSDDNSLITN-SFLAN---PVAAQP 60
           MKPFLDLEKEPS LANDSDISSQVAS+     LHENS+DNSLITN SF AN   P A QP
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFFANPNIPAADQP 60

Query: 61  GFKSVCLDLTLNFNIEDLETR-DSTGFSLSSTS-ESSNEPTCHPTAAAAIPRVFSCNFCQ 120
           GF+SVCLDLTLNFNIED+ETR DSTGFSLS+TS +SSNEPT    A  A+PRVFSCN+CQ
Sbjct: 61  GFESVCLDLTLNFNIEDIETRPDSTGFSLSTTSDQSSNEPTA--CATMAVPRVFSCNYCQ 120

Query: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSL 180
           RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYA+LASLPLKGSSF+SLGIKAHSSL
Sbjct: 121 RKFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSL 180

Query: 181 LHGFTAPMKPTDIGSSARF--EPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQP 240
           LHG  APMKP +I SSARF  EPG+IGMPIFL+DDE EVMWPGSFRPM ETRNT ELT+P
Sbjct: 181 LHGIAAPMKPNEIRSSARFEPEPGYIGMPIFLEDDETEVMWPGSFRPMVETRNTDELTRP 240

Query: 241 SFILTGISRISSMDKVSSEDVE 251
           SFILTGIS ISS DK + EDVE
Sbjct: 241 SFILTGISSISSADK-TWEDVE 259

[Close]

BLAST of Carg07422 vs. TrEMBL
Match: tr|A0A2P5AR99|A0A2P5AR99_PARAD (Zinc finger, C2H OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308040 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.5e-74
Identity = 161/254 (63.39%), Postives = 191/254 (75.20%), Query Frame = 0


Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHE---NSDDNSLITNSFLANPVAAQPGFKSV 60
           MKP +DLE E S ANDSD+SSQVASNIS+ E    S + SL  +S L N    Q G   V
Sbjct: 1   MKPTIDLEVEAS-ANDSDVSSQVASNISIQETSAGSSNESLTNSSHLTNTAMVQSGLDPV 60

Query: 61  CLDLTLNF-NIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSS 120
            LDLTL+F N +DL  R+S G SLSSTSESSNEP+   T AAAI RVFSCN+CQRKF+SS
Sbjct: 61  ALDLTLSFNNNDDLGARESVGLSLSSTSESSNEPSSLNT-AAAITRVFSCNYCQRKFYSS 120

Query: 121 QALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTA 180
           QALGGHQNAHKRERTLAKRAMRM I +E+Y  LASLPL GSSFRSLGIKAHSS  HG T 
Sbjct: 121 QALGGHQNAHKRERTLAKRAMRMSIFSEKYTGLASLPLHGSSFRSLGIKAHSS-HHGMTP 180

Query: 181 PMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGIS 240
           P++P ++ SSARFE G+ G+PIFL DDEAE++WPGSFRP++ET NT     PSF+LTG S
Sbjct: 181 PVRPPEMRSSARFEQGYFGVPIFLQDDEAELLWPGSFRPVSETSNTS--AHPSFVLTGSS 240

Query: 241 RISSMDKVSSEDVE 251
            ++  +   + D++
Sbjct: 241 NLNFAEVTPTADID 249

[Close]

BLAST of Carg07422 vs. TrEMBL
Match: tr|A0A2P4K8D3|A0A2P4K8D3_QUESU (Zinc finger protein 4 OS=Quercus suber OX=58331 GN=CFP56_34555 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 154/253 (60.87%), Postives = 191/253 (75.49%), Query Frame = 0


Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHENS---DDNSLITNSFLANPVAAQPGFKSV 60
           MKP  DLE +    +DS++SSQVASNIS+ E S    ++SL   S L N + AQ   + V
Sbjct: 1   MKPNFDLEIKAPSESDSEVSSQVASNISIQETSAGPSNDSLTNCSHLTNLIVAQSESEPV 60

Query: 61  CLDLTLNFNIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSSQ 120
            LDLTL+FN +DL  RDS G SLSSTSESSNEP  H T  AAIPRVFSCN+CQRKFFSSQ
Sbjct: 61  TLDLTLSFNTDDLCGRDSFGLSLSSTSESSNEPVSH-TTTAAIPRVFSCNYCQRKFFSSQ 120

Query: 121 ALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTAP 180
           ALGGHQNAHKRERTLAKRAMRMGI +ERYA+LASLPL GSSFRSLGIKAHSS+ +GF  P
Sbjct: 121 ALGGHQNAHKRERTLAKRAMRMGIFSERYASLASLPLHGSSFRSLGIKAHSSVHYGFVPP 180

Query: 181 MKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGISR 240
           ++P+++ ++ RF+ G++GMPIF++DDE E++WPGSFR +AE  N      PSF+LT  S 
Sbjct: 181 VRPSEVRNNTRFQNGYMGMPIFVEDDETELLWPGSFRQVAEAGNP---PHPSFVLTESSN 240

Query: 241 ISSMDKVSSEDVE 251
           I+ ++     D++
Sbjct: 241 INFVEVTPQVDID 249

[Close]

BLAST of Carg07422 vs. TrEMBL
Match: tr|A0A2P5DEP7|A0A2P5DEP7_9ROSA (Zinc finger, C2H OS=Trema orientalis OX=63057 GN=TorRG33x02_253510 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 160/254 (62.99%), Postives = 191/254 (75.20%), Query Frame = 0


Query: 1   MKPFLDLEKEPSLANDSDISSQVASNISLHE---NSDDNSLITNSFLANPVAAQPGFKSV 60
           MKP +DLE E S ANDSD+SSQVASNIS+ E    S + SL  +S L N    Q G   V
Sbjct: 1   MKPTIDLEVEAS-ANDSDVSSQVASNISIQETSAGSSNESLTNSSHLTNTAMVQSGLDPV 60

Query: 61  CLDLTLNF-NIEDLETRDSTGFSLSSTSESSNEPTCHPTAAAAIPRVFSCNFCQRKFFSS 120
            LDLTL+F N +DL  R+S G SLSSTSESSNEP+   T AAAI RVFSCN+CQRKF+SS
Sbjct: 61  ALDLTLSFNNNDDLGARESVGLSLSSTSESSNEPSSLNT-AAAITRVFSCNYCQRKFYSS 120

Query: 121 QALGGHQNAHKRERTLAKRAMRMGILAERYANLASLPLKGSSFRSLGIKAHSSLLHGFTA 180
           QALGGHQNAHKRERTLAKRAMRM I +E+Y  LASLPL GSSFRSLGIKAHSS  HG T 
Sbjct: 121 QALGGHQNAHKRERTLAKRAMRMSIFSEKYTGLASLPLHGSSFRSLGIKAHSS-HHGMTP 180

Query: 181 PMKPTDIGSSARFEPGHIGMPIFLDDDEAEVMWPGSFRPMAETRNTHELTQPSFILTGIS 240
           P++P ++ SSARFE G+ G+PIFL DDEAE++WPGSFR ++ET NT     PSF+LTG S
Sbjct: 181 PVRPPEMRSSARFEQGYFGVPIFLQDDEAELLWPGSFRQVSETSNTS--AHPSFVLTGSS 240

Query: 241 RISSMDKVSSEDVE 251
            ++ ++   + D++
Sbjct: 241 NLNFVEVTPTADID 249

The following BLAST results are available for this feature:

BLAST of Carg07422 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948481.1	5.3e-135	99.60	zinc finger protein 4-like isoform X1 [Cucurbita moschata] >XP_022948482.1 zinc ...	[more]
XP_023525082.1	2.2e-133	98.80	zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023525083.1 zinc fin...	[more]
XP_022998251.1	2.5e-132	98.40	zinc finger protein 4-like isoform X1 [Cucurbita maxima] >XP_022998252.1 zinc fi...	[more]
XP_022143386.1	1.2e-107	82.21	zinc finger protein 4-like [Momordica charantia] >XP_022143387.1 zinc finger pro...	[more]
XP_022948483.1	5.2e-106	99.49	zinc finger protein 4-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg07422 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66140.1	5.6e-30	55.15	zinc finger protein 4	[more]
AT1G24625.1	2.3e-23	43.87	zinc finger protein 7	[more]
AT1G80730.1	1.1e-17	57.30	zinc-finger protein 1	[more]
AT5G25160.1	6.0e-16	46.67	zinc finger protein 3	[more]
AT5G10970.1	2.5e-14	38.04	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of Carg07422 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39263\|ZFP4_ARATH	1.0e-28	55.15	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
sp\|Q39266\|ZFP7_ARATH	4.1e-22	43.87	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
sp\|Q42485\|ZFP1_ARATH	2.0e-16	57.30	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
sp\|Q39262\|ZFP3_ARATH	1.1e-14	46.67	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
sp\|Q39261\|ZFP2_ARATH	2.5e-11	79.49	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Carg07422 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2N5\|A0A1S3C2N5_CUCME	1.3e-102	81.68	zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103496205 PE=4 SV=1	[more]
tr\|A0A0A0LBR9\|A0A0A0LBR9_CUCSA	1.9e-101	81.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G196420 PE=4 SV=1	[more]
tr\|A0A2P5AR99\|A0A2P5AR99_PARAD	4.5e-74	63.39	Zinc finger, C2H OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308040 PE=4 SV=1	[more]
tr\|A0A2P4K8D3\|A0A2P4K8D3_QUESU	1.3e-73	60.87	Zinc finger protein 4 OS=Quercus suber OX=58331 GN=CFP56_34555 PE=4 SV=1	[more]
tr\|A0A2P5DEP7\|A0A2P5DEP7_9ROSA	2.2e-73	62.99	Zinc finger, C2H OS=Trema orientalis OX=63057 GN=TorRG33x02_253510 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR013087	Znf_C2H2_type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07422-RA	Carg07422-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 93..150 e-value: 3.5E-5 score: 25.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..269
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 1..268
None	No IPR available	PANTHER	PTHR26374:SF239	ZINC FINGER PROTEIN 4	coord: 1..268
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 106..126
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 104..131 score: 11.157
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 102..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07422	Cla013120	Watermelon (97103) v1	carwmB0760
Carg07422	Csa3G196420	Cucumber (Chinese Long) v2	carcuB0781
Carg07422	MELO3C019567	Melon (DHL92) v3.5.1	carmeB0756
Carg07422	ClCG05G010490	Watermelon (Charleston Gray)	carwcgB0739
Carg07422	CSPI03G17920	Wild cucumber (PI 183967)	carcpiB0799
Carg07422	Cucsa.108710	Cucumber (Gy14) v1	carcgyB0856
Carg07422	CmaCh01G003310	Cucurbita maxima (Rimu)	carcmaB1059
Carg07422	CmaCh14G008780	Cucurbita maxima (Rimu)	carcmaB1057
Carg07422	CmoCh14G008970	Cucurbita moschata (Rifu)	carcmoB1031
Carg07422	CmoCh01G003460	Cucurbita moschata (Rifu)	carcmoB1033
Carg07422	Lsi05G002610	Bottle gourd (USVL1VR-Ls)	carlsiB700
Carg07422	Cp4.1LG03g05570	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07422	CsGy3G017880	Cucumber (Gy14) v2	carcgybB0758
Carg07422	MELO3C019567.2	Melon (DHL92) v3.6.1	carmedB0771
Carg07422	CsaV3_3G018010	Cucumber (Chinese Long) v3	carcucB0802
Carg07422	Cla97C05G092860	Watermelon (97103) v2	carwmbB0795
Carg07422	Bhi01G001302	Wax gourd	carwgoB0895

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07422	Carg24249	Silver-seed gourd	carcarB213

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07422	Cucurbita pepo (Zucchini)	carcpeB1072