Carg24249 (gene) Silver-seed gourd

Overview
NameCarg24249
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein 4-like
LocationCucurbita_argyrosperma_scaffold_191 : 238071 .. 238832 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCATTTCTTGATCTTCAAAAGGAGCCTTCTTGTTTGGCAAATGATTCTGATATTAGAAGCCAAGTTGGTTCGATCTGTTGCGGGTTGAGGACTCCTCCTTCTCCTTCTCCTTCTCCTTCCCCTTCCGCTCAACCAGGATTCGAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGTTGAAGATATCGGAACATGTCCCGATTCGACGCGATTTTCATTGTCGAGCACAAGTGATCAGAGTAGTAATGAACCGACGGCTGTCCCAAGAGTGTTTTCTTGCAACTACTGTCAGCGCAAGTTCTTTAGTTCACAGGCTCTTGGTGGTCACCAGAATGCACATAAGCGCGAGCGAACGATGGCGAAACGGGCGATGCGTATGGGCATTCTAGCTGAAAGATATGCTAGTCTAGCTTCTTTACCATTGAAAGGTTCATCATTCAAGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGAATGACTGCACCAATGATGCCTATTGATATCAGGAGCAGTGCTAGATTCGAACCGGAACCGGGATATATAGGCATGCCGATTTTCTTGGAGGATGATGAAGCAGACGTTATGTGGCCGGGTAGTTTTCGTCCAATGGTAGAAACTAGAAACACTCGTGAACTAACTCAACCAAGTTTCAGATTGACCGATCTTTCAAGCATAAGCTCAGTAGAGAAGACATCGATACAAGACGTAGAAAACTCGACCCCTGATCTCACACTTAAACTCTAA

mRNA sequence

ATGAAACCATTTCTTGATCTTCAAAAGGAGCCTTCTTGTTTGGCAAATGATTCTGATATTAGAAGCCAAGTTGGTTCGATCTGTTGCGGGTTGAGGACTCCTCCTTCTCCTTCTCCTTCTCCTTCCCCTTCCGCTCAACCAGGATTCGAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGTTGAAGATATCGGAACATGTCCCGATTCGACGCGATTTTCATTGTCGAGCACAAGTGATCAGAGTAGTAATGAACCGACGGCTGTCCCAAGAGTGTTTTCTTGCAACTACTGTCAGCGCAAGTTCTTTAGTTCACAGGCTCTTGGTGGTCACCAGAATGCACATAAGCGCGAGCGAACGATGGCGAAACGGGCGATGCGTATGGGCATTCTAGCTGAAAGATATGCTAGTCTAGCTTCTTTACCATTGAAAGGTTCATCATTCAAGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGAATGACTGCACCAATGATGCCTATTGATATCAGGAGCAGTGCTAGATTCGAACCGGAACCGGGATATATAGGCATGCCGATTTTCTTGGAGGATGATGAAGCAGACGTTATGTGGCCGGGTAGTTTTCGTCCAATGGTAGAAACTAGAAACACTCGTGAACTAACTCAACCAAGTTTCAGATTGACCGATCTTTCAAGCATAAGCTCAGTAGAGAAGACATCGATACAAGACGTAGAAAACTCGACCCCTGATCTCACACTTAAACTCTAA

Coding sequence (CDS)

ATGAAACCATTTCTTGATCTTCAAAAGGAGCCTTCTTGTTTGGCAAATGATTCTGATATTAGAAGCCAAGTTGGTTCGATCTGTTGCGGGTTGAGGACTCCTCCTTCTCCTTCTCCTTCTCCTTCCCCTTCCGCTCAACCAGGATTCGAGTCGGTTTGCCTCGACTTGACTCTCAACTTTAACATCGTTGAAGATATCGGAACATGTCCCGATTCGACGCGATTTTCATTGTCGAGCACAAGTGATCAGAGTAGTAATGAACCGACGGCTGTCCCAAGAGTGTTTTCTTGCAACTACTGTCAGCGCAAGTTCTTTAGTTCACAGGCTCTTGGTGGTCACCAGAATGCACATAAGCGCGAGCGAACGATGGCGAAACGGGCGATGCGTATGGGCATTCTAGCTGAAAGATATGCTAGTCTAGCTTCTTTACCATTGAAAGGTTCATCATTCAAGTCCTTGGGGATCAAAGCACACTCTTCACTACTCCATGGAATGACTGCACCAATGATGCCTATTGATATCAGGAGCAGTGCTAGATTCGAACCGGAACCGGGATATATAGGCATGCCGATTTTCTTGGAGGATGATGAAGCAGACGTTATGTGGCCGGGTAGTTTTCGTCCAATGGTAGAAACTAGAAACACTCGTGAACTAACTCAACCAAGTTTCAGATTGACCGATCTTTCAAGCATAAGCTCAGTAGAGAAGACATCGATACAAGACGTAGAAAACTCGACCCCTGATCTCACACTTAAACTCTAA

Protein sequence

MKPFLDLQKEPSCLANDSDIRSQVGSICCGLRTPPSPSPSPSPSAQPGFESVCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKTSIQDVENSTPDLTLKL
Homology
[Close]
BLAST of Carg24249 vs. NCBI nr
Match: XP_022935269.1 (zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 461.1 bits (1185), Expect = 2.5e-126
Identity = 238/253 (94.07%), Postives = 238/253 (94.07%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSICCGLRTPPXXXXXXXXXXXPGFESVCLDLTLNF 60
           MKPFLDLQKEPSCLANDSDI SQVGSI CG RTPP           PGFESVCLDLTLNF
Sbjct: 1   MKPFLDLQKEPSCLANDSDISSQVGSIHCGSRTPP----SPSPSAQPGFESVCLDLTLNF 60

Query: 61  NIVEDIGTCPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE 120
           NIVEDIGT PDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE
Sbjct: 61  NIVEDIGTRPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARF 180
           RTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARF
Sbjct: 121 RTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARF 180

Query: 181 EPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKTSIQ 240
           EPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKTSIQ
Sbjct: 181 EPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKTSIQ 240

Query: 241 DVENSTPDLTLKL 254
           DVENSTPDLTLKL
Sbjct: 241 DVENSTPDLTLKL 249

[Close]
BLAST of Carg24249 vs. NCBI nr
Match: XP_022983355.1 (zinc finger protein 4-like [Cucurbita maxima])

HSP 1 Score: 454.1 bits (1167), Expect = 3.0e-124
Identity = 240/253 (94.86%), Postives = 244/253 (96.44%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSICCGLRTPPXXXXXXXXXXXPGFESVCLDLTLNF 60
           MKPFLDLQKEPSCLANDSDI SQVGSI CG RTP   XXXXXXXXXPGFESVCLDLTLNF
Sbjct: 1   MKPFLDLQKEPSCLANDSDISSQVGSIRCGSRTPLSPXXXXXXXXXPGFESVCLDLTLNF 60

Query: 61  NIVEDIGTCPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE 120
           NIVEDIGTCPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE
Sbjct: 61  NIVEDIGTCPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARF 180
           RTMAKRAMRMGILAE+YASLASL LKGSSFKSLGIKAHSSLLHG+TAPMMPID RSSARF
Sbjct: 121 RTMAKRAMRMGILAEKYASLASLQLKGSSFKSLGIKAHSSLLHGITAPMMPIDTRSSARF 180

Query: 181 EPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKTSIQ 240
           EPEPGYIGMP+FLEDDEADVMWPGSFRPMVETRNT ELTQPSFRLTDLSSI+SVEKTSIQ
Sbjct: 181 EPEPGYIGMPMFLEDDEADVMWPGSFRPMVETRNTHELTQPSFRLTDLSSINSVEKTSIQ 240

Query: 241 DVENSTPDLTLKL 254
           DVENSTPDLTLKL
Sbjct: 241 DVENSTPDLTLKL 253

[Close]
BLAST of Carg24249 vs. NCBI nr
Match: XP_023528051.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 3.6e-117
Identity = 236/254 (92.91%), Postives = 237/254 (93.31%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSICCGLRTPPXXXXXXXXXXXPGFESVCLDLTLNF 60
           MKPFLDLQKEPSCLANDSDI SQ GSICCG RT PXXXXXXXXXX PGFESVCLDLTLNF
Sbjct: 1   MKPFLDLQKEPSCLANDSDISSQGGSICCGSRT-PXXXXXXXXXXHPGFESVCLDLTLNF 60

Query: 61  NIVEDIGTCPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE 120
           NIVEDIGT PDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE
Sbjct: 61  NIVEDIGTRPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARF 180
           RTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARF
Sbjct: 121 RTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARF 180

Query: 181 EPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKT-SI 240
           EPEPGYIGMPIFLEDDEAD+MWPGSFR M ETRNTRELTQPSFRLTDLSSISSVEKT   
Sbjct: 181 EPEPGYIGMPIFLEDDEADIMWPGSFRAMAETRNTRELTQPSFRLTDLSSISSVEKTXXX 240

Query: 241 QDVENSTPDLTLKL 254
                ST DLTLKL
Sbjct: 241 XXXXXSTLDLTLKL 253

[Close]
BLAST of Carg24249 vs. NCBI nr
Match: XP_004140816.1 (PREDICTED: zinc finger protein 4-like [Cucumis sativus] >KGN57476.1 hypothetical protein Csa_3G196420 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 206/271 (76.01%), Postives = 217/271 (80.07%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSI-------------CCGLRTPPXXXXXXXXXXXP 60
           MKPFLDL+KEPSCLANDSDI SQV S                   +             P
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFFANPNIPAADQP 60

Query: 61  GFESVCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPT-----AVPRVFSCNYCQR 120
           GFESVCLDLTLNFNI EDI T PDST FSLS+TSDQSSNEPT     AVPRVFSCNYCQR
Sbjct: 61  GFESVCLDLTLNFNI-EDIETRPDSTGFSLSTTSDQSSNEPTACATMAVPRVFSCNYCQR 120

Query: 121 KFFSSQALGGHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL 180
           KFFSSQALGGHQNAHKRERT+AKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL
Sbjct: 121 KFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL 180

Query: 181 HGMTAPMMPIDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPS 240
           HG+ APM P +IRSSARFEPEPGYIGMPIFLEDDE +VMWPGSFRPMVETRNT ELT+PS
Sbjct: 181 HGIAAPMKPNEIRSSARFEPEPGYIGMPIFLEDDETEVMWPGSFRPMVETRNTDELTRPS 240

Query: 241 FRLTDLSSISSVEKTSIQDVENSTPDLTLKL 254
           F LT +SSISS +KT  +DVENST DLTLKL
Sbjct: 241 FILTGISSISSADKT-WEDVENSTLDLTLKL 269

[Close]
BLAST of Carg24249 vs. NCBI nr
Match: XP_008456195.1 (PREDICTED: zinc finger protein 4-like [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 4.4e-99
Identity = 203/271 (74.91%), Postives = 218/271 (80.44%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSI-------------CCGLRTPPXXXXXXXXXXXP 60
           MKPFLDL+KEPSCLANDSDI SQV S                   +             P
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFLANPNIPAADQP 60

Query: 61  GFESVCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPT-----AVPRVFSCNYCQR 120
           GFESVCL+LTLNFNI ED+ T PDST FSLSSTSDQSSNEPT     AVPRVFSCNYCQR
Sbjct: 61  GFESVCLELTLNFNI-EDLETRPDSTGFSLSSTSDQSSNEPTACATMAVPRVFSCNYCQR 120

Query: 121 KFFSSQALGGHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL 180
           KFFSSQALGGHQNAHKRERT+AKRAMRMGILA+RY SLASLPLKGSSFKSLGIKAHSSLL
Sbjct: 121 KFFSSQALGGHQNAHKRERTLAKRAMRMGILADRYVSLASLPLKGSSFKSLGIKAHSSLL 180

Query: 181 HGMTAPMMPIDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPS 240
           HG+ APM P +IRSSARFEPEPGYIGMP+FLEDDEA+VMWPGSFRPMVETR+T ELT+PS
Sbjct: 181 HGVAAPMKPNEIRSSARFEPEPGYIGMPLFLEDDEAEVMWPGSFRPMVETRSTHELTRPS 240

Query: 241 FRLTDLSSISSVEKTSIQDVENSTPDLTLKL 254
           F LT +SSISS +KTS +DVENST DLTLKL
Sbjct: 241 FILTGISSISSADKTS-EDVENSTLDLTLKL 269

[Close]
BLAST of Carg24249 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 88/184 (47.83%), Postives = 112/184 (60.87%), Query Frame = 0 

Query: 93  RVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRAMRMGI--------------LAERYA 152
           RVFSCNYCQRKF+SSQALGGHQNAHKRERT+AKRAMRMG+               A   A
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 153 SLASLPLKGS------SFKSLGIKAHSSLLH-GMTAPMMPIDIRSSARFEPEPGYIG--M 212
           +L+ LPL GS      SF++LGI+AHSS     MT       IR+ ARF    GY G  +
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARF--NQGYFGNCI 202

Query: 213 PIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKTSIQDVENSTPDL 254
           P ++EDDEA+++WPGSFR   +  N   +   +  L +   +  ++     D+E+S PDL
Sbjct: 203 PFYVEDDEAEMLWPGSFR---QATNAVAVEAGNDNLGE-RKMDFLDVKQAMDMESSLPDL 260

[Close]
BLAST of Carg24249 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 118.2 bits (295), Expect = 7.1e-27
Identity = 87/197 (44.16%), Postives = 111/197 (56.35%), Query Frame = 0 

Query: 70  PDSTRFSLSSTSDQSSNEPT------AVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTM 129
           P+S   SL    + + N+ T      A PRVFSCNYC+RKF+SSQALGGHQNAHKRERTM
Sbjct: 28  PESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTM 87

Query: 130 AKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARFEPE 189
           AKRAM MG    R       P   +S  SLG++AHS LLH   +   P+     +RF  +
Sbjct: 88  AKRAMHMG----RMFGHHHRPYTYTS-SSLGMQAHSGLLHHTLSQPQPL----VSRFHHQ 147

Query: 190 PGYIG--MPIFLEDDE--ADVMWPGSFRPMVETRNTRELTQPSFRLTDLSS---ISSVEK 249
            GY G  +P+F + D+  +D  WPGSFR +VE     E   P   +    S   ++SV  
Sbjct: 148 -GYFGNTVPLFFDYDDGGSDFFWPGSFRQVVE-----EAEAPVVVVASTESGLDLNSVAA 207

Query: 250 TSIQDVENSTPDLTLKL 254
               D  +S PDLTL+L
Sbjct: 208 NGGVDNNSSKPDLTLRL 209

[Close]
BLAST of Carg24249 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-18
Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 0 

Query: 90  AVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRA----MRMGIL-----------A 149
           A PRVFSCNYCQRKF+SSQALGGHQNAHKRERT+AKR     M +  L            
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 150 ERYASLASLPLKGS--SFKSLGIKAHSSL 162
            R+AS+ASLPL GS  +  +LGI+AHS++
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTI 151

[Close]
BLAST of Carg24249 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 79  STSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRAMRMGILAERYA 138
           +TS  + +  +   ++FSCNYCQR F+SSQALGGHQNAHKRERT+AKR  RM   A  + 
Sbjct: 45  TTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFG 104

Query: 139 ---SLASLPLKG--SSFKSLGIKAHS 160
                + LP  G  ++ +SLGI+AHS
Sbjct: 105 HPYGFSPLPFHGQYNNHRSLGIQAHS 130

[Close]
BLAST of Carg24249 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 0 

Query: 48  GFESVCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPTAVPRVFSCNYCQRKFFSS 107
           G++S    L    N+++ + T   +  F+ S++++Q         ++FSCNYCQR F+SS
Sbjct: 66  GYDSSQPQLNQELNLLDCLETGVVTPSFNGSTSTEQ---------KLFSCNYCQRTFYSS 125

Query: 108 QALGGHQNAHKRERTMAKRAMRMGILAE--RYASLASLPLKGS-SFKSLGIKAHS 160
           QALGGHQNAHKRERT+AKR  RM   A        A +P  G  S ++LGI+AHS
Sbjct: 126 QALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHS 171

[Close]
BLAST of Carg24249 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 3.9e-30
Identity = 88/184 (47.83%), Postives = 112/184 (60.87%), Query Frame = 0 

Query: 93  RVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRAMRMGI--------------LAERYA 152
           RVFSCNYCQRKF+SSQALGGHQNAHKRERT+AKRAMRMG+               A   A
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 153 SLASLPLKGS------SFKSLGIKAHSSLLH-GMTAPMMPIDIRSSARFEPEPGYIG--M 212
           +L+ LPL GS      SF++LGI+AHSS     MT       IR+ ARF    GY G  +
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARF--NQGYFGNCI 202

Query: 213 PIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSISSVEKTSIQDVENSTPDL 254
           P ++EDDEA+++WPGSFR   +  N   +   +  L +   +  ++     D+E+S PDL
Sbjct: 203 PFYVEDDEAEMLWPGSFR---QATNAVAVEAGNDNLGE-RKMDFLDVKQAMDMESSLPDL 260

[Close]
BLAST of Carg24249 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 87/197 (44.16%), Postives = 111/197 (56.35%), Query Frame = 0 

Query: 70  PDSTRFSLSSTSDQSSNEPT------AVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTM 129
           P+S   SL    + + N+ T      A PRVFSCNYC+RKF+SSQALGGHQNAHKRERTM
Sbjct: 28  PESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTM 87

Query: 130 AKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMPIDIRSSARFEPE 189
           AKRAM MG    R       P   +S  SLG++AHS LLH   +   P+     +RF  +
Sbjct: 88  AKRAMHMG----RMFGHHHRPYTYTS-SSLGMQAHSGLLHHTLSQPQPL----VSRFHHQ 147

Query: 190 PGYIG--MPIFLEDDE--ADVMWPGSFRPMVETRNTRELTQPSFRLTDLSS---ISSVEK 249
            GY G  +P+F + D+  +D  WPGSFR +VE     E   P   +    S   ++SV  
Sbjct: 148 -GYFGNTVPLFFDYDDGGSDFFWPGSFRQVVE-----EAEAPVVVVASTESGLDLNSVAA 207

Query: 250 TSIQDVENSTPDLTLKL 254
               D  +S PDLTL+L
Sbjct: 208 NGGVDNNSSKPDLTLRL 209

[Close]
BLAST of Carg24249 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.4e-17
Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 0 

Query: 90  AVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRA----MRMGIL-----------A 149
           A PRVFSCNYCQRKF+SSQALGGHQNAHKRERT+AKR     M +  L            
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 150 ERYASLASLPLKGS--SFKSLGIKAHSSL 162
            R+AS+ASLPL GS  +  +LGI+AHS++
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTI 151

[Close]
BLAST of Carg24249 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.3e-14
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 79  STSDQSSNEPTAVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRAMRMGILAERYA 138
           +TS  + +  +   ++FSCNYCQR F+SSQALGGHQNAHKRERT+AKR  RM   A  + 
Sbjct: 45  TTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFG 104

Query: 139 ---SLASLPLKG--SSFKSLGIKAHS 160
                + LP  G  ++ +SLGI+AHS
Sbjct: 105 HPYGFSPLPFHGQYNNHRSLGIQAHS 130

[Close]
BLAST of Carg24249 vs. Swiss-Prot
Match: sp|Q39261|ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-11
Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 92  PRVFSCNYCQRKFFSSQALGGHQNAHKRERTMAKRAMRM 131
           PRVFSCNYCQRKF+SSQALGGHQNAHK ERT+AK++  +
Sbjct: 49  PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

[Close]
BLAST of Carg24249 vs. TrEMBL
Match: tr|A0A0A0LBR9|A0A0A0LBR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G196420 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 7.7e-100
Identity = 206/271 (76.01%), Postives = 217/271 (80.07%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSI-------------CCGLRTPPXXXXXXXXXXXP 60
           MKPFLDL+KEPSCLANDSDI SQV S                   +             P
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFFANPNIPAADQP 60

Query: 61  GFESVCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPT-----AVPRVFSCNYCQR 120
           GFESVCLDLTLNFNI EDI T PDST FSLS+TSDQSSNEPT     AVPRVFSCNYCQR
Sbjct: 61  GFESVCLDLTLNFNI-EDIETRPDSTGFSLSTTSDQSSNEPTACATMAVPRVFSCNYCQR 120

Query: 121 KFFSSQALGGHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL 180
           KFFSSQALGGHQNAHKRERT+AKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL
Sbjct: 121 KFFSSQALGGHQNAHKRERTLAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL 180

Query: 181 HGMTAPMMPIDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPS 240
           HG+ APM P +IRSSARFEPEPGYIGMPIFLEDDE +VMWPGSFRPMVETRNT ELT+PS
Sbjct: 181 HGIAAPMKPNEIRSSARFEPEPGYIGMPIFLEDDETEVMWPGSFRPMVETRNTDELTRPS 240

Query: 241 FRLTDLSSISSVEKTSIQDVENSTPDLTLKL 254
           F LT +SSISS +KT  +DVENST DLTLKL
Sbjct: 241 FILTGISSISSADKT-WEDVENSTLDLTLKL 269

[Close]
BLAST of Carg24249 vs. TrEMBL
Match: tr|A0A1S3C2N5|A0A1S3C2N5_CUCME (zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103496205 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.9e-99
Identity = 203/271 (74.91%), Postives = 218/271 (80.44%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSI-------------CCGLRTPPXXXXXXXXXXXP 60
           MKPFLDL+KEPSCLANDSDI SQV S                   +             P
Sbjct: 1   MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFLANPNIPAADQP 60

Query: 61  GFESVCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPT-----AVPRVFSCNYCQR 120
           GFESVCL+LTLNFNI ED+ T PDST FSLSSTSDQSSNEPT     AVPRVFSCNYCQR
Sbjct: 61  GFESVCLELTLNFNI-EDLETRPDSTGFSLSSTSDQSSNEPTACATMAVPRVFSCNYCQR 120

Query: 121 KFFSSQALGGHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLL 180
           KFFSSQALGGHQNAHKRERT+AKRAMRMGILA+RY SLASLPLKGSSFKSLGIKAHSSLL
Sbjct: 121 KFFSSQALGGHQNAHKRERTLAKRAMRMGILADRYVSLASLPLKGSSFKSLGIKAHSSLL 180

Query: 181 HGMTAPMMPIDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPS 240
           HG+ APM P +IRSSARFEPEPGYIGMP+FLEDDEA+VMWPGSFRPMVETR+T ELT+PS
Sbjct: 181 HGVAAPMKPNEIRSSARFEPEPGYIGMPLFLEDDEAEVMWPGSFRPMVETRSTHELTRPS 240

Query: 241 FRLTDLSSISSVEKTSIQDVENSTPDLTLKL 254
           F LT +SSISS +KTS +DVENST DLTLKL
Sbjct: 241 FILTGISSISSADKTS-EDVENSTLDLTLKL 269

[Close]
BLAST of Carg24249 vs. TrEMBL
Match: tr|A0A2P5AR99|A0A2P5AR99_PARAD (Zinc finger, C2H OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308040 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65
Identity = 153/268 (57.09%), Postives = 183/268 (68.28%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSICCGLRTPP---------XXXXXXXXXXXPGFES 60
           MKP +DL+ E S  ANDSD+ SQV S      T                       G + 
Sbjct: 1   MKPTIDLEVEAS--ANDSDVSSQVASNISIQETSAGSSNESLTNSSHLTNTAMVQSGLDP 60

Query: 61  VCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPT------AVPRVFSCNYCQRKFF 120
           V LDLTL+FN  +D+G   +S   SLSSTS +SSNEP+      A+ RVFSCNYCQRKF+
Sbjct: 61  VALDLTLSFNNNDDLG-ARESVGLSLSSTS-ESSNEPSSLNTAAAITRVFSCNYCQRKFY 120

Query: 121 SSQALGGHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGM 180
           SSQALGGHQNAHKRERT+AKRAMRM I +E+Y  LASLPL GSSF+SLGIKAHSS  HGM
Sbjct: 121 SSQALGGHQNAHKRERTLAKRAMRMSIFSEKYTGLASLPLHGSSFRSLGIKAHSS-HHGM 180

Query: 181 TAPMMPIDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRL 240
           T P+ P ++RSSARF  E GY G+PIFL+DDEA+++WPGSFRP+ ET NT     PSF L
Sbjct: 181 TPPVRPPEMRSSARF--EQGYFGVPIFLQDDEAELLWPGSFRPVSETSNTS--AHPSFVL 240

Query: 241 TDLSSISSVEKTSIQDVENSTPDLTLKL 254
           T  S+++  E T   D++NSTPDLTLKL
Sbjct: 241 TGSSNLNFAEVTPTADIDNSTPDLTLKL 259

[Close]
BLAST of Carg24249 vs. TrEMBL
Match: tr|A0A2P5DEP7|A0A2P5DEP7_9ROSA (Zinc finger, C2H OS=Trema orientalis OX=63057 GN=TorRG33x02_253510 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 153/268 (57.09%), Postives = 183/268 (68.28%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSICCGLRTPP---------XXXXXXXXXXXPGFES 60
           MKP +DL+ E S  ANDSD+ SQV S      T                       G + 
Sbjct: 1   MKPTIDLEVEAS--ANDSDVSSQVASNISIQETSAGSSNESLTNSSHLTNTAMVQSGLDP 60

Query: 61  VCLDLTLNFNIVEDIGTCPDSTRFSLSSTSDQSSNEPT------AVPRVFSCNYCQRKFF 120
           V LDLTL+FN  +D+G   +S   SLSSTS +SSNEP+      A+ RVFSCNYCQRKF+
Sbjct: 61  VALDLTLSFNNNDDLG-ARESVGLSLSSTS-ESSNEPSSLNTAAAITRVFSCNYCQRKFY 120

Query: 121 SSQALGGHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGM 180
           SSQALGGHQNAHKRERT+AKRAMRM I +E+Y  LASLPL GSSF+SLGIKAHSS  HGM
Sbjct: 121 SSQALGGHQNAHKRERTLAKRAMRMSIFSEKYTGLASLPLHGSSFRSLGIKAHSS-HHGM 180

Query: 181 TAPMMPIDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRL 240
           T P+ P ++RSSARF  E GY G+PIFL+DDEA+++WPGSFR + ET NT     PSF L
Sbjct: 181 TPPVRPPEMRSSARF--EQGYFGVPIFLQDDEAELLWPGSFRQVSETSNTS--AHPSFVL 240

Query: 241 TDLSSISSVEKTSIQDVENSTPDLTLKL 254
           T  S+++ VE T   D++NSTPDLTLKL
Sbjct: 241 TGSSNLNFVEVTPTADIDNSTPDLTLKL 259

[Close]
BLAST of Carg24249 vs. TrEMBL
Match: tr|A0A2N9GN10|A0A2N9GN10_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31729 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 148/262 (56.49%), Postives = 182/262 (69.47%), Query Frame = 0 

Query: 1   MKPFLDLQKEPSCLANDSDIRSQVGSICCGLRTPPXXXXXXXXXXXPG---FESVCLDLT 60
           MK   DL+ + +C  NDS++ SQV S   G                      E V LDLT
Sbjct: 1   MKRNFDLEVK-ACSENDSEVSSQVASNISGPSNDSLTNCSRLTNLIVAQSESEPVTLDLT 60

Query: 61  LNFNIVEDIGTCPDSTRFSLSSTSDQSSNEP------TAVPRVFSCNYCQRKFFSSQALG 120
           L+FN  +D+G   +S  FSLSSTS +SSNEP       A+PRVFSCNYCQRKFFSSQALG
Sbjct: 61  LSFN-TDDLG-ARESLGFSLSSTS-ESSNEPASHTTTAAIPRVFSCNYCQRKFFSSQALG 120

Query: 121 GHQNAHKRERTMAKRAMRMGILAERYASLASLPLKGSSFKSLGIKAHSSLLHGMTAPMMP 180
           GHQNAHKRERT+AKRAMRMGI +ERYASLASLPL GSSF+SLGIKAHSS+ +G   P+ P
Sbjct: 121 GHQNAHKRERTLAKRAMRMGIFSERYASLASLPLHGSSFRSLGIKAHSSVHYGFAPPVRP 180

Query: 181 IDIRSSARFEPEPGYIGMPIFLEDDEADVMWPGSFRPMVETRNTRELTQPSFRLTDLSSI 240
            +IR+++R   + GY+GMPIF+EDDEA+++WPGSFR + E  N      PSF LT+ S+I
Sbjct: 181 SEIRNTSRL--QNGYMGMPIFVEDDEAELLWPGSFRQVAEAGN----PHPSFVLTESSNI 240

Query: 241 SSVEKTSIQDVENSTPDLTLKL 254
           + VE T   +++NSTPDLTLKL
Sbjct: 241 NFVEVTPPVEIDNSTPDLTLKL 252

The following BLAST results are available for this feature:
BLAST of Carg24249 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022935269.12.5e-12694.07zinc finger protein 4-like [Cucurbita moschata][more]
XP_022983355.13.0e-12494.86zinc finger protein 4-like [Cucurbita maxima][more]
XP_023528051.13.6e-11792.91zinc finger protein 4-like [Cucurbita pepo subsp. pepo][more]
XP_004140816.11.2e-9976.01PREDICTED: zinc finger protein 4-like [Cucumis sativus] >KGN57476.1 hypothetical... [more]
XP_008456195.14.4e-9974.91PREDICTED: zinc finger protein 4-like [Cucumis melo][more]
BLAST of Carg24249 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66140.12.1e-3147.83zinc finger protein 4[more]
AT1G24625.17.1e-2744.16zinc finger protein 7[more]
AT1G80730.14.6e-1858.43zinc-finger protein 1[more]
AT5G25160.11.3e-1551.16zinc finger protein 3[more]
AT5G10970.11.7e-1543.48C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Carg24249 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39263|ZFP4_ARATH3.9e-3047.83Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
sp|Q39266|ZFP7_ARATH1.3e-2544.16Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
sp|Q42485|ZFP1_ARATH8.4e-1758.43Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
sp|Q39262|ZFP3_ARATH2.3e-1451.16Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
sp|Q39261|ZFP2_ARATH2.4e-1179.49Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1[more]
BLAST of Carg24249 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBR9|A0A0A0LBR9_CUCSA7.7e-10076.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G196420 PE=4 SV=1[more]
tr|A0A1S3C2N5|A0A1S3C2N5_CUCME2.9e-9974.91zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103496205 PE=4 SV=1[more]
tr|A0A2P5AR99|A0A2P5AR99_PARAD4.7e-6557.09Zinc finger, C2H OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308040 PE=4 SV=1[more]
tr|A0A2P5DEP7|A0A2P5DEP7_9ROSA1.4e-6457.09Zinc finger, C2H OS=Trema orientalis OX=63057 GN=TorRG33x02_253510 PE=4 SV=1[more]
tr|A0A2N9GN10|A0A2N9GN10_FAGSY1.7e-6256.49Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31729 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24249-RACarg24249-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 74..140
e-value: 1.1E-5
score: 27.1
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 1..253
NoneNo IPR availablePANTHERPTHR26374:SF239ZINC FINGER PROTEIN 4coord: 1..253
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 97..117
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 95..122
score: 11.344
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 93..123