CmaCh19G011240 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G011240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger CCCH domain protein
Location	Cma_Chr19 : 9274071 .. 9284319 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTTATTATTTTTTTAAAAAAAAACCAAATATATGTGACTGAATTGTCAACGAAGTATTTCGTGTATACATTCGACAGAACCGGTGGGGTTCCATTGTAGTTTATGGAGAAGCTTGGAAGCTCCGCTGTCCTTGGGCGGGGGTCAGTTTCTCTCTAGAATGACGAAGCTATCAGCTATATAGGATGAAGAATGGATTCGCTCGAGTGTATCGAAAGTAGTAGACAGCAGGTATGTACTCCTGTAAGAATGAAAAGGAAAATTAGATCCAAGAAATATGAATTCGTTGGTTGGGGATCAAGACCACTTATTGAATTTCTTGAATCAATTGGCAAGGATACCAAAGAGAAGATTTCTCGACACGACGTTACCTCTATTGTAAATGAATATGTCAGTATTAACAACCTTCTTCATCCTTCTAGAAAGAAACGAATTGTTTGCGATGATAGGCTCCATTCCATTTTCGGAAGGAAAACAATTGGCCGTATTAAAATCCATGACATGCTAGAGCCGCACTTTGCGGAGAACCAAGATGAATCAGATGATGACTTTTCTTACAGCTCTGACGAGACGGAGAATCTTTTAAATACCCTCAAACGGGAGAATGGTAAAACCCCAGGAAGAAAGCTCAGTCAGAAGACGAGAGTGCTGGTGAACCCAAATACTTCTTTTGCTTCCATGGTTCCTGGAAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGGTTAAAGATCATGAAACCTTTGAGAGCAAGTTGATTGGTAGCTTTGTCAGGATTAGATCTGATCCCCATGACTATCTTCAGAAAAATACTCATCAGCTTGTGCAAGTTACAGGTAACCAAACTACCCTTTTTTATTCATGAACAGGGAATACGCTAGCTGGAATAATTTATCTCTACAAATATAAACTTCGTTGTAATCTTGTATACGTTTTATTTATATTCTTCATGGAGATAACTGCAAATTGTTGTTATAAAAACCATTGAAAGAATGTTACCGGAGTTAAATAGGTCCTACTATGTTATGTGCTTACCGTCCAACCATATGTCATCTCAGATAATTAATTCAGTGATCTTATTTTTTGACATTCTTTAGGGGTGAAGAAAGTTTCAATACCTGGTGATTTGGGTACAAGATTCCTTCTTCATGTTTCCAATGTGATGAAAGACGTCGGTATTGGCATGCTTTCAGATGAAAAGTTTTCTGAGGTAATTTCTCCACTGTCATTATTATTATTATAGATCAATATACTTTTTTTTTCCTTCAGTGTAATATAGAGTATGTATGGATTATACAGTGTAAACAAAACGATAAGATATTATTCTTCATAGAAGAAAAAGACCGTAAGAATTTGTATTGCTGACTAAAAATGATAGAATTTAAATGATTGTGATGTAAGAGGCTTTTGGAATTTTTGAACTTTTCTTGGTGTCTTTAGACCATTCTTTAGCTTTCTTATTCGTTGTTGTCATTCTTTCCCTAGCTTGTTCTGCATTTACCTTTTACCCGTATAAGTGAAGCTTGTTTACCAAGAGTTTGATATGCTTTAGTTACGGGCTCTTTGAGGCTATAAACAACTGTCTTTTAGGTTGTAAAAGGGTATTTTGTTAAAATAAAATTCAGAACTCTCCTTGAATTACTTTAGTTTGGTATTGAAGCCCCCATAAAATGGACATCCCATGGCTGGAAAGAAGGCTGCCAGCTACCTCGGAGTTGACAAAGATCAATCTGGTTTAGAGTCTACATTCCACCCTTGCGCTATCCCTCTAACTTCAACTCAAGGCTTTCTGTCGGTTGAAGAAACCCTTGGAGGTATGCAACATGTAATTACTTCCATGGCGATCCAACTAGAGAGAATCAAACTCAGATTGGGGCAATCATAGTTGAGATCATTAGTGAACTCCCATCAATCAATACAAGATCAAAGAAGGTTGATAAATCAAGAATTCGATTCTTCCTGTAAAGAAGAAGATTTTCTGCACCACGATATTTACCAGCTTTAGAAAATCAAGTGATCTGCAGGCAAGGGGACTCTGTACCCAATCTGTATTCAATTTGGAACATAAATGATTACAAGTTTAAGATTGATTTCCAAGCTATAATGGAATTTGGACGTTGAAGATTGTCTCAATTAGATCAAGAATGGTCAGACCTTTTTTTTTTTCTTTAATATACTTTTTATTACATGTCTGGAAGAAAAGAAGGTTAAGTTAGTAACATTAAAACTCAAAGAGGGAGCGTCCGCTTAGTGGGACCCACTCCTCAAGTCCAAAACAGTAGGCGAGGTTTCAGGAAGAGAACTATCAAGACTTGACCAATAAGATCCTAAAAGAAAACTTCTTGTCAAATAACTACGAACATATCCTTTTTAATCAATATCATCACTGCAAGCAAGTGTCAAGAACGGTGGGAGATCATACCAAAGAATTCAACTGCCTAGGCGTTTGTTGTCACTGTCATGCTTGTCCAAGGCGTGTTGCCTATGACCGCATGCCCGTTTCAAATCCCTTTTACATGCTTTCATCTTAAATAAGTCTTTATTACTTCATGTTGTGTCAATACGGTGGGTATGATTGGTCTCCAAAATCATGACTACACCCGCTAGGGCTAAAATGTCCCAAAATCATGTCTACGAGCATACACCGACATTGTCCGCAAAGTTCAAATTTCTCACGGCTGACTTGTTCGTTGGGTTAGAACAAGTGTCACACAATTGCTATCTCGTTGCCGCAAGAGTGCGATTGTGACAAGTGGTATCAGAACCAAGTCGGCTCCTTGGAAAGTAGTACACAACCATGTTAGTTGCAAAACAACTAGACAAGTCCCAGTTGACTAATTAGCTGAAATTGAAGAATAGTTACTCTGCATGAGTGAAGTTCTTGATGGAATGGGGCTTTTGGAATCGCACATGACTGAGATTGCCGCTAAAGCCGACAGGATTGATGAGATGGCAGGCCGCCTTGAGGAAATGTCTGTTCGCGAATTAATGTCTAGCGTCGAGGCCCTAGAAGACAAGGCCACAACTTCTGGTGGCTTCGAGCATAGGGATAGCTCGACGGGCTCTGTTGCTCGAATGGAAGAACGCATCGAGGGCTTAGACGATGCCCAACAAGCGATTGTTAAGATGGTTTCAAATTTGTTTGAAGATTTGAGAGCAACCCTTGGAGTGGTCAGGGCTGAAGTGGCAGATCTAAGCGCCAAATTAAACCTCACCATGAGAGCGGTGGGGTACCAAACCCCAGCTTGGGGTGTAATACAGTATAACAAGATAAAGGTCCTGAAGCCCAAACCCTTCTATGGGTTCGAGATGACAAGACTCTAGAGAATTTTATCTTCGATCTCGAACAATACTTTTGAGTCACAAATATCGTGGCAGAAGAAGCGAAGGTCACGTTGGCAATAATGCATCTAACCAACGATGCTAAGTTGTGGTGGAGGTCCAAGTACATGGACATTCAAGAGGGTCCATGTACCGTGGATACTCAGGATAGCTTGAAACAAGAACTCTGCTCACAGTTCTTCCTAGAGAATGTCGAGATAATCGCAAGAAGGAAGTTAAAAGAGCCAAGGCATACTGGTAGTATCCGAGACTACGTTAATCAGTTTTCTGGGCTTATGTTAGATATTCTTGATATGTTTGAGATAAACAAAGTCTTCAATTTTATTGAGGGGCTGAAGCTGTGGACGAAAATCAAGCTTTACGAACACAGAGTTCAAGACCTTTCCACGGCCTATGCTATCGCTAAACGATTATTCAATCTTAGTATCGATCAACCCCAAGAGATAGGGTGGAGCAGGAGTCTGCAAGTGATGGAAAAATGAAGGGCCGGTCAGAAGAGTCGGCCACAACAATTTCAAGATGTAGAGAGAGTTTTGATCAAATTGAGGTTAGATCAACCCCAAGGTCAAAACAACAAGAATAAAAAATTGGTGCGAAAATATTATGGACCAGTCAAAGTTATCCACAAGGTCAGAAAAGCATCATATAGGATCCAATTGCTCCCATGGATGCAGACTAGCCCTGGTTTCCACGTTAGTAACTTGAAATGTTACTATCTCGAACAAGAAGACATCAAGCAAAAAGAGGTGACACATCCTCACACATCCTCACACAAAGAAGAAAATTTTCAAGCGAAGAAAGTAGGAGAGACGCCAACAGTCAACAAACTGAGAAGTGGTTTTCAACAGTTTCTTGCAGATTGGAAAAGACTCCTCATTGCTGAGATCAGCTGGTAGCGCATCGAGGGACATAAAGTTAGCCTCAACCTACATCATTGAGTTCCCGAAGAGTCAGTTGACAAAGACGTCAACCAATTAAGTGGGAGAGGATGTTACGGTCATGCTTGTCCAAGGTGTGTTGCTTATGGCCGCATGTCGGATATCCTGATCATGCTTGTCTAGGACGTGTTGTCCATGGCCGCATGCCCGTTCCAAACCCCTTTGATGTGCTTTCATCTTAGATAAACTCTTACTATTTCATGTTGCGTCAATACGGGGGTGTATGACGAGTCACTAAAATCATTTCTATACCCGCGAGGGCTAAGATGCCCCAAAATGTACTATAGTCGGATGCGATTATTCGTCAATTCTTTCTACTCTGAGTTATATACCGTTTAAATTGTGGTGTTTCTTTCTTGCTTATAGTCATATAACGTTGCTTTCTTCAATTTTTTTCAAATTGTTTTCAAATGTATTTCCTCGCTAACGTTTTCTAAAACATTTCTCGCAAACATGACTCGAGGCTCAAGCATATACCGACATTGTCCGCGAAGTTCGAGTTTCTCATAGTTGACTTGTTTGTTGGATTAGAACTAGTGTCGTACAATCGTTTTTCCGCTGCCGCAAGAGTGCGATTGTGACACTTGGCTCAACCTCAAGCTTGCTGAAAGATAATGGTAACTAATCAATTGAAATATCTCTGGACTAACGCAAGATATCTAAGAAAAGGTGGAATTCCAACCTTGAGTACAATTTACAGAGGCTGTATAATGGTCAAAAAAGATTGAAGAGCAATTGGATAAGAGAAAAAACCATCAAAAAAGAAAATAATGGGAGGCAGTTAACGCATCTTAGACGTTTTCCTTTGCTTTCTCTTTCCTTAAGTCTACTGTTTGTAAGGTTTTTTATACATCATTTATGCCTACCTAATAATAATAAATTACTGTTTCCTTTTCAGGAAAAAGTTGTTGCCCCTCGGTGTTAATTCTAGATTTTCTTTATTGAACAGGGTAGAATAACCCATCTATCTAATGTATATTAAATCATCCTTACACACATTGTAACTGAGAATCAGTGTTTCAACTTATTTATCATTAGAGGCTTTTTTCTCCTCCAAGCCAAAATTTACCCTTTATGTTTAATTGAAATGTTTTGGATAGGCATCTACTTGTACTTGTATGTGTTGCATGGGAGTTATTCTATTATGATTATTACTGGAAGTTTAATTGCCATTGCTATGTTGCAGGAGGAATGCAAAGATCTGGATCTGAGAGTAAAAAGTGGTTTGGTTAAGAGATTAACTATTGTAAGTTTTTTTTTTGTCGCTCAGATGGTCCTTTTTTTCTCTAACTTGACAAAATTAGTTCTTTATTGCTAATTTCAATATGATAATTGTCGGAGGATTAACTTGAGTTGGGATATATTCGTGGAATTCCATTAAATAAGAAAAGTAGTGAATTTATCTTTATTGTTACCTAACATCTAAGAATTTATCTAGATTTAAGATTTATTGTTACGGATTTATTATTACCTAATATCTATGGATTTAGTTAGCCTTTTTGTATTATAAATGACACATGTACCTAAAAAAAATTAAATAGGAAGAATAGCAAGATAATTTGCAATATGGTACCAGAGCTTTTCTATTCGGGAAAATCTGATTATAACCAAAACCCTTACTCAATATGTGAATCCTTTATCATTGACAATCATCCATCGTGATCAATTTTCTTTTGAAGCCTTCATAGCTGCCGTTAAGTTTCATTTGGAGCCTTAATTGCTGCCATCACCGAGATCAATTTTTATAAGTGAGAGTCTTCAGGGGTATTTTGCATAATTTAATCAAAGATTAACTCCCCCAATCAAGGGTATTTTGTATAATTTAACTAAAGATTAACTCCCCAGAGTCATAATGAAGAATTTATGATGTTTTCTTCAAACATGACTTATTCATGAACACATTTTTTCACAAGCTTTTAATAATAAAAATAAAAATAAAACGGGAAGGGACATAAAAGACCAGCCCTATAGAAGGAGTCCAATCCTTCCTTACACAGGAATAGAATTCAATCCGAAAGAATAAGAACTAACTGATTATTACAAAAATTTAAGAAATTGTTGCGCATAAAGAGATGGTAAATCAACAATATTCCACACCTCTTCCGAGGACCTCTCACATTCTTGAAAGTTTCTACATTTCCTCTCCAGCCAGCTGCTCCACAAAACAACAAAACAAGAATGCCATTGGATTCTGACCTTATAACCAGGGAGGATTCAAAAGAACTTCCTCCATGCTATAAAAGTATTTGGTGATCCAGTTGAGCTATGATCAATTTCCTGACCAGACAATTTGAGGGGGTCTAAAAGCTAATGGTTATTACTATTGGAGAAGGATATGAGCAACTGATCATCTTTAGTGTAAAAGAAATGCATTTTTCTCAAATGGTGGGTGGCATACTCGTGTTATTGATTCTGTCAAGCATTTTAAAATTTTTGCTACGTTTTCGAACTTATTACCGACAACTCTTGTACAACTTAAATTCTTGTCAAGGTCTCCAACATGTGAATGTTGTAAAAGCATTGATGTTTACTGTTAATATGAAGTTCGTCTCTATCTTCTTCTGGTTGCATTTATGGATACGTCAATGTGTTCCCAAATCTAGTGTGGAGAACCTCTTTATTTCTCTCTTACCAGTTGTAGATCATTTCTCCTATTTACATGTGCTCATTTTTCTTTTTGGTAGGCAGAGGTTCAACAAAAAGTTGAGGCCTTGCATGTGGATATTACCAAGCATGTACGTATGATGATAACTCCAAATTTTTTCATTGCTCACAAGGCAGGCTGCCTTGCATTTTTCTTTAGTTTTATTCCCTCTAGCAGTTTTTGTTATTTAAAAATTTATTTATCAGTGAACGTTCAATATATCGAATGATATCAAAAGGTAGACGAGTATATATAACACAAAGTTATGAAGGTCAAAATAGTAATTAGCTTTCAGTCATGAAAAATTTATGGATGTTTATGTCAGAAGGCTACATTCAGATATTAAGTCTTGAAATGTGAAGAGTAGACTGCATATGGTTATTACTAAAGTCCATTAAATCTCGAAAGCACGCTATGGTATATATATGCATCTGTAGTGGTATGCAAAAGTTTGTTCATGCCAACCATCATGCTCATCTGATGGAGTATTTCGATTTCTTTACTGCGCCGAATTCATGCTCATCTGATGGGAAGGATTTGCACATCTTTGTTTTGGTGACTTGGTCTGTCAACTCAGTGCTATGTTTCTGTTTCAGTGGCTTTCGAGAGAAATTTCTTTGCTGCAAAACCTCATTGATCAGGCGAATGAAAAGGGGTGGCGCAAGGAATATCCTTTTGTAATTTCTTTTTATTGTATGTTGTGTTTGCTAGAGTAGGATATTTCTCATATATTTCATACGAATGTACAGCTATTAAAGGAAAAAAGGAGCTAAAACAGGTAATAACCTAACGGTAACAAGGAATATAAGGATGAAAGCGAAGCATGACAAAGAAGGAAACAATAATAGAAGAGATACAAAAAAAATTAACAACAACAACAAACTTCTGCACTGAAACAAGAATCTGAGAACTTTTTATTGATGTAATGAAAATTATACATTTCATTACTATGAGTCAAACTCACTTTAGCTAGCAGATGCTGTCGTATTTACTGTATCACAAGTGTTATTTTTTTTCAATTGCTGCTATAATTAGATAATAGTAAATACACAAGTGTTATTTTTTTTCAATTGCTGCTATAATTAGATAATTATTATTGTTGATCGATAGGAGAGATTTGTTGTTTATTGCTCCTGCTTCCTCACATTTGAGCTCGTCAAGCCAACTTATCAATAGTTTGCAATGGATGTTAATGCCTATTTCCTCTCTAATTCTCTAATATGAGCTTTCTTCTTTACTTTACATCAATTTCGTATCATAGCATGATCCCCTTTCTCCTCTCAATTGTATTTTCAGTCATGTTAAACTGCATTGTTTCTTTCTGCTCAAACAATCAATCATTTAAAATTCAAGAGTATATCTTATTATATGAAGTTCTTCATGAATCAAGCTTATACGATTTAACATTGTAGTAAATTATCTGTATCTAAAATAATTTTAGTTGGTTCTAATGGTGGTTATAACATGTGCACTTCCTTCCCATTGCCCCTCATTGAGTCGGTAGACAACATGTTTATATAATGAGAGCATGCCTCTTCTTATTATGTAATAGTCTCAACCTATTTTCTAATTTGCTGATTACAAAAATATGCCTGTATCAGCTATAGAACGTATGCAGTTCCTCCCCATTGCCTCTCTTTAGACAACATTTTTATATGATGAGAGAATGTCTTTTCTCATTATGTAATAGTCACAACCTATTTTCTAGTAAGCTGATTACAAAAGTATGCATGTGCCAGCTATAGAACGTTGCTTCTTGATGGCTATATTTCTGTTTCTATTTTGAGCCACTTGATTGACCCAAACATGCATTTTCCCCACAGTGGCTTAAACAACGAAGCATGTTTTTTTAAATTTATTTACCCTGGTGAAGGCCATCTTTACTGGAAATGAGCAACTGTTTAAGAAATTTGAGAAATAACCGCAAGATTATTAGAAACTGCTTCCCAAAGTCCTGGAGCTATAGGTTATAGATCTCTAAGAGAATTGATTGGGTGAATGGGATTATCTTTTAAAGTTCAGTTCAATGATTTATTATTTTTAGAACCTGTAATTTGGAAATTTTATTGATACAACTTTGGAGCTTTTTTTTCTTTTTTGCCCCTTCTTCTGGTATTGGTATATCATTATCATCATCCCAGATTGTGCTTATCATTAGACTAGCATGCTTCTAAAAAGACCATATTCAGTAGCTTCTAATCTTTGTGACTCTTGGAAGTAAGATTGCCTAAAAGGCTAAAACAAAACAAATGAGCCTTAACTGACTTGATGTACGCTTGACCAATATTTGGAGAAAAAGCTGCTCCTTCAGACTGCAGAAGAACAGTCGCGCATTTTTCGTGAGATTCCACAAGTGATTGCAGATGAACCAGAATTTCAAGGCATTTATGGTAGTGCAAATCAAGGAGATAATGTCACTAATGAAGGAGATGAAACCAAATTGCAGGTGAGAAGGGAGGTTTCAGATGATACAAATCAAGGAGAAACTGTATTTGGTTCAAACCCGAATGTTGATATTTATGTTGCAGAAAATCGAACTGCAGCTTCGATGTCCAACGTGGAAGAATTTGCAGGTTTGTCATCTTTATTTATGATTCGGCCTGAAATTTTGTGTGAAGGTCTTGATATCGCATCTAGTTGATATTGGAAGAGAAATTATATTTGGTTCAAACCCAAATGTTGATATTGGAAGTACACTAGGTAGATGACATGTGAACTGATTGCTTTCTATTATGTTATTGTTGCAGAATGTAGACGAAGTGTTCTTGATGAAGAACAGCCCCCACAACCAGTAGAATCTACGTATAATAGTAGCTTGAATGAGACAGAACTTATAAATGAGGTGGATAAAGGCTGGCTAGCGAATGAGCAGATTAAAGAATCTCGAGTGATAAATTTGAGCGACGATGACGAACTACCAAGGGGTGAAGAGCTTGATTGGAATAGCACACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGACGTTCAAGGGCCCTTTTGTCTTGCGTCATTGAAGAACTGGAAGGATGCCGACTATTTTCCACCAGATTTCAAGGTCTGGAAGATGGGTCAGACTCAAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCACTTCCTTCCATAACTACTAATACTGCTACATTTTTATTTCAAATGGAAGCATTACATGGATGGGTAAGCTTCCTAACTGTCTTGATGCGTAACGTTTAATGGAACTGTGTTGAGGACATCAATCTAGATATCTATTCTTAGCCTCCTTTGGGATTTTGGAAATCTTAAATATTTTTACATTTATTTCGTTG

mRNA sequence

AGTTTTATTATTTTTTTAAAAAAAAACCAAATATATGTGACTGAATTGTCAACGAAGTATTTCGTGTATACATTCGACAGAACCGGTGGGGTTCCATTGTAGTTTATGGAGAAGCTTGGAAGCTCCGCTGTCCTTGGGCGGGGGTCAGTTTCTCTCTAGAATGACGAAGCTATCAGCTATATAGGATGAAGAATGGATTCGCTCGAGTGTATCGAAAGTAGTAGACAGCAGGTATGTACTCCTGTAAGAATGAAAAGGAAAATTAGATCCAAGAAATATGAATTCGTTGGTTGGGGATCAAGACCACTTATTGAATTTCTTGAATCAATTGGCAAGGATACCAAAGAGAAGATTTCTCGACACGACGTTACCTCTATTGTAAATGAATATGTCAGTATTAACAACCTTCTTCATCCTTCTAGAAAGAAACGAATTGTTTGCGATGATAGGCTCCATTCCATTTTCGGAAGGAAAACAATTGGCCGTATTAAAATCCATGACATGCTAGAGCCGCACTTTGCGGAGAACCAAGATGAATCAGATGATGACTTTTCTTACAGCTCTGACGAGACGGAGAATCTTTTAAATACCCTCAAACGGGAGAATGGTAAAACCCCAGGAAGAAAGCTCAGTCAGAAGACGAGAGTGCTGGTGAACCCAAATACTTCTTTTGCTTCCATGGTTCCTGGAAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGGTTAAAGATCATGAAACCTTTGAGAGCAAGTTGATTGGTAGCTTTGTCAGGATTAGATCTGATCCCCATGACTATCTTCAGAAAAATACTCATCAGCTTGTGCAAGTTACAGGGGTGAAGAAAGTTTCAATACCTGGTGATTTGGGTACAAGATTCCTTCTTCATGTTTCCAATGTGATGAAAGACGTCGGTATTGGCATGCTTTCAGATGAAAAGTTTTCTGAGGAGGAATGCAAAGATCTGGATCTGAGAGTAAAAAGTGGTTTGGTTAAGAGATTAACTATTGCAGAGGTTCAACAAAAAGTTGAGGCCTTGCATGTGGATATTACCAAGCATTGGCTTTCGAGAGAAATTTCTTTGCTGCAAAACCTCATTGATCAGGCGAATGAAAAGGGGTGGCGCAAGGAGCTTGACCAATATTTGGAGAAAAAGCTGCTCCTTCAGACTGCAGAAGAACAGTCGCGCATTTTTCGTGAGATTCCACAAGTGATTGCAGATGAACCAGAATTTCAAGGCATTTATGGTAGTGCAAATCAAGGAGATAATGTCACTAATGAAGGAGATGAAACCAAATTGCAGGTGAGAAGGGAGGTTTCAGATGATACAAATCAAGGAGAAACTGTATTTGGTTCAAACCCGAATGTTGATATTTATGTTGCAGAAAATCGAACTGCAGCTTCGATGTCCAACGTGGAAGAATTTGCAGAATGTAGACGAAGTGTTCTTGATGAAGAACAGCCCCCACAACCAGTAGAATCTACGTATAATAGTAGCTTGAATGAGACAGAACTTATAAATGAGGTGGATAAAGGCTGGCTAGCGAATGAGCAGATTAAAGAATCTCGAGTGATAAATTTGAGCGACGATGACGAACTACCAAGGGGTGAAGAGCTTGATTGGAATAGCACACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGACGTTCAAGGGCCCTTTTGTCTTGCGTCATTGAAGAACTGGAAGGATGCCGACTATTTTCCACCAGATTTCAAGGTCTGGAAGATGGGTCAGACTCAAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCACTTCCTTCCATAACTACTAATACTGCTACATTTTTATTTCAAATGGAAGCATTACATGGATGGGTAAGCTTCCTAACTGTCTTGATGCGTAACGTTTAATGGAACTGTGTTGAGGACATCAATCTAGATATCTATTCTTAGCCTCCTTTGGGATTTTGGAAATCTTAAATATTTTTACATTTATTTCGTTG

Coding sequence (CDS)

ATGGATTCGCTCGAGTGTATCGAAAGTAGTAGACAGCAGGTATGTACTCCTGTAAGAATGAAAAGGAAAATTAGATCCAAGAAATATGAATTCGTTGGTTGGGGATCAAGACCACTTATTGAATTTCTTGAATCAATTGGCAAGGATACCAAAGAGAAGATTTCTCGACACGACGTTACCTCTATTGTAAATGAATATGTCAGTATTAACAACCTTCTTCATCCTTCTAGAAAGAAACGAATTGTTTGCGATGATAGGCTCCATTCCATTTTCGGAAGGAAAACAATTGGCCGTATTAAAATCCATGACATGCTAGAGCCGCACTTTGCGGAGAACCAAGATGAATCAGATGATGACTTTTCTTACAGCTCTGACGAGACGGAGAATCTTTTAAATACCCTCAAACGGGAGAATGGTAAAACCCCAGGAAGAAAGCTCAGTCAGAAGACGAGAGTGCTGGTGAACCCAAATACTTCTTTTGCTTCCATGGTTCCTGGAAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGGTTAAAGATCATGAAACCTTTGAGAGCAAGTTGATTGGTAGCTTTGTCAGGATTAGATCTGATCCCCATGACTATCTTCAGAAAAATACTCATCAGCTTGTGCAAGTTACAGGGGTGAAGAAAGTTTCAATACCTGGTGATTTGGGTACAAGATTCCTTCTTCATGTTTCCAATGTGATGAAAGACGTCGGTATTGGCATGCTTTCAGATGAAAAGTTTTCTGAGGAGGAATGCAAAGATCTGGATCTGAGAGTAAAAAGTGGTTTGGTTAAGAGATTAACTATTGCAGAGGTTCAACAAAAAGTTGAGGCCTTGCATGTGGATATTACCAAGCATTGGCTTTCGAGAGAAATTTCTTTGCTGCAAAACCTCATTGATCAGGCGAATGAAAAGGGGTGGCGCAAGGAGCTTGACCAATATTTGGAGAAAAAGCTGCTCCTTCAGACTGCAGAAGAACAGTCGCGCATTTTTCGTGAGATTCCACAAGTGATTGCAGATGAACCAGAATTTCAAGGCATTTATGGTAGTGCAAATCAAGGAGATAATGTCACTAATGAAGGAGATGAAACCAAATTGCAGGTGAGAAGGGAGGTTTCAGATGATACAAATCAAGGAGAAACTGTATTTGGTTCAAACCCGAATGTTGATATTTATGTTGCAGAAAATCGAACTGCAGCTTCGATGTCCAACGTGGAAGAATTTGCAGAATGTAGACGAAGTGTTCTTGATGAAGAACAGCCCCCACAACCAGTAGAATCTACGTATAATAGTAGCTTGAATGAGACAGAACTTATAAATGAGGTGGATAAAGGCTGGCTAGCGAATGAGCAGATTAAAGAATCTCGAGTGATAAATTTGAGCGACGATGACGAACTACCAAGGGGTGAAGAGCTTGATTGGAATAGCACACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGACGTTCAAGGGCCCTTTTGTCTTGCGTCATTGAAGAACTGGAAGGATGCCGACTATTTTCCACCAGATTTCAAGGTCTGGAAGATGGGTCAGACTCAAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCACTTCCTTCCATAA

Protein sequence

MDSLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVEDLVKDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKDVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQGDNVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRRSVLDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELPRGEELDWNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAVLLSDILSHFLP

Homology

[Close]

BLAST of CmaCh19G011240 vs. Swiss-Prot
Match: Y5843_ARATH (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 416.8 bits (1070), Expect = 3.7e-115
Identity = 252/556 (45.32%), Postives = 338/556 (60.79%), Query Frame = 1


Query: 21  KRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSRKKR 80
           KRK R K++EFVGWGSR LIEFL S+GKDT E ISR+DV+  + +Y+S   LL PS KK+
Sbjct: 19  KRKARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKK 78

Query: 81  IVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLLNTLKRENGK 140
           +VCD RL  +FG +TI R+K++D+LE H+ ENQD+SD DF Y  DE + + ++       
Sbjct: 79  VVCDKRLVLLFGTRTIFRMKVYDLLEKHYKENQDDSDFDFLYE-DEPQIICHS------- 138

Query: 141 TPGRKLSQKT-RVLVNPNTSFASMVPGNINLVYLRKSLVEDLVKDHETFESKLIGSFVRI 200
               K++++T +V+  P  +FA++V  NI L+YLRKSLV++L+K  +TFE K++GSFVRI
Sbjct: 139 ---EKIAKRTSKVVKKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEGKMLGSFVRI 198

Query: 201 RSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKDVGIGMLSDEKFSEEEC 260
           +SDP+DYLQK  +QLVQVTGVKK     D    FLL V+N +KDV I +LSD+ FS+EEC
Sbjct: 199 KSDPNDYLQKYPYQLVQVTGVKKEHGTDD----FLLQVTNYVKDVSISVLSDDNFSQEEC 258

Query: 261 KDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLIDQANEKGWRKELD 320
           +DL  R+K+GL+K+ TI E+++K + LH D TKHWL REI LL+ LID+ANEKGWR+EL 
Sbjct: 259 EDLHQRIKNGLLKKPTIVEMEEKAKKLHKDQTKHWLGREIELLKRLIDRANEKGWRRELS 318

Query: 321 QYLEKKLLLQTAEEQSRIFREIPQVIADE----PEFQGIYGSANQGDNVTNEGDETKLQV 380
           +YL+K+ LLQ  +EQ+R+ RE+P+VI +E    PE       A++ DN      E+ L  
Sbjct: 319 EYLDKRELLQNPDEQARLLREVPEVIGEELVQNPEVSS--PEAHKSDN-EQRLSESPLSC 378

Query: 381 RREVSDDTNQGETVFG------------SNPNVDIYVAENRTAASMSNVEEFAECRRSVL 440
             E    T +   +FG            SNP     +    T  +       A      L
Sbjct: 379 IHE----TPEARNLFGGEDQQFNNGYVMSNPITTPGITSCATEINKGLPTWIASAGAEYL 438

Query: 441 --DEEQPPQ-------PVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELP 500
             D EQP         P E +  S L  +  +N VD G  +  Q   S VI LSDDDE  
Sbjct: 439 HVDVEQPANGIIGGETPTEESKVSQLQSSIPVNNVDNG--SQVQPNPSEVIELSDDDEDD 498

Query: 501 R--GEELD--------WNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVW 541
              GE LD         +     L W Y DPQG VQGPF L  LK W DA+YF   F+VW
Sbjct: 499 NGDGETLDPKVEDVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVW 550

[Close]

BLAST of CmaCh19G011240 vs. Swiss-Prot
Match: C3H19_ARATH (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE=1 SV=3)

HSP 1 Score: 167.9 bits (424), Expect = 3.0e-40
Identity = 108/347 (31.12%), Postives = 184/347 (53.03%), Query Frame = 1


Query: 30   EFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSRKKRIVCDDRLHS 89
            E + W S+ L++ +  + +  +  +   +V +++  Y+   NL  P RK +++CD RL +
Sbjct: 803  ETMEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQN 862

Query: 90   IFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLLNTLKRENGKTPGRKLSQK 149
            +FG+  +G  ++ ++L+ HF + +    DD      +TE   +    EN   P +    K
Sbjct: 863  LFGKSHVGHFEMLNLLDSHFLKKEQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDK 922

Query: 150  TRVLVNPNT---------SFASMVPGNINLVYLRKSLVEDLVKDHETFESKLIGSFVRIR 209
             R     N           FA++   NINL+YLR+SLVEDL++D   FE K+  +FVR+R
Sbjct: 923  KRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLR 982

Query: 210  SDPHDYLQKNTHQLVQVTGVKKVSIPGDLG---TRFLLHVSNVMKD--VGIGMLSDEKFS 269
               +   +++ ++LVQV G  K   P  +G   T ++L + N+ K   + I ++S++ F+
Sbjct: 983  ISGNQ--KQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFT 1042

Query: 270  EEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLIDQANEKGWR 329
            E+ECK L   +K GL+ RLT+ ++Q+K  AL     K+ L  EI    +L D+A++ G R
Sbjct: 1043 EDECKRLKQSIKCGLINRLTVGDIQEKAIALQEVRVKNLLEAEILRFSHLRDRASDMGRR 1102

Query: 330  KE---------------LDQYLEKKLLLQTAEEQSRIFREIPQVIAD 348
            KE               L + +EK  LL++ EE+ R   EIP++ AD
Sbjct: 1103 KEYPYLLKLSNSLTMLTLRECVEKLQLLKSPEERQRRLEEIPEIHAD 1147

[Close]

BLAST of CmaCh19G011240 vs. Swiss-Prot
Match: C3H44_ARATH (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 129.8 bits (325), Expect = 9.1e-29
Identity = 107/403 (26.55%), Postives = 191/403 (47.39%), Query Frame = 1


Query: 34  WGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGR 93
           W ++ L+EF+  +       +S+ DV  ++ +Y+   NL  P +K +++CD  L  +FG+
Sbjct: 319 WATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGK 378

Query: 94  KTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLLNTLKRENGKTP-----GRKLSQ 153
           + +G  ++  +LE H    Q++     + + + T  + + ++ ++   P      RK+ +
Sbjct: 379 QRVGHFEMLKLLESHVL-IQEKPKGAKTTNGETTHAVPSQIEEDSVHDPMVRDRRRKMRR 438

Query: 154 KT--RVLVNPNTSFASMVPGNINLVYLRKSLVEDLVKDHETFESKLIGSFVRIRSDPHDY 213
           KT  RV      ++A++   NINL+YLR+  +E L+ D    + K++G+ +RI+    D 
Sbjct: 439 KTDGRVQNENLDAYAAIDVHNINLIYLRRKFLESLLDDINKVDEKVVGTILRIKVSGSDQ 498

Query: 214 LQKNTHQLVQVTGVKKVSIPGDLG---TRFLLHVSNVMKD--VGIGMLSDEKFSEEECKD 273
            + + H+LVQV G  K      LG   T  +L + N+ K   + I  LSD+  +E+ECK 
Sbjct: 499 -KLDIHRLVQVVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSDQNITEDECKR 558

Query: 274 LDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLIDQANEKGWRKELDQY 333
           L   +K GL KRLT+ ++ +    L        L  EI  L +L D+A            
Sbjct: 559 LRQSIKCGLNKRLTVVDILKTAATLQAMRINEALEAEILKLNHLRDRA------------ 618

Query: 334 LEKKLLLQTAEEQSRIFREIPQVIADE--------PEFQGI-------------YGSANQ 393
            +K  LL++ EE+ R+ +E+P+V  D          E  G+              G  N+
Sbjct: 619 -KKLELLKSPEERQRLLQEVPEVHTDPSMDPSHALSEDAGLGTRKQDNHVKAQSKGPQNK 678

Query: 394 GDNVTNEGDETK-------LQVRREVSDDTNQGETVFGSNPNV 397
           G N+ N G+  +       L+ R  V  D +    V  ++ N+
Sbjct: 679 GVNLNNVGNNVQKKYDAPILRSRNNVHADKDDCSKVHNNSSNI 706

[Close]

BLAST of CmaCh19G011240 vs. TrEMBL
Match: A0A0A0K3N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G252670 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.0e-135
Identity = 243/281 (86.48%), Postives = 262/281 (93.24%), Query Frame = 1


Query: 1   MDSLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVT 60
           MDS E IESS QQVCTPVRMKRKIRSK+YEFVGWGSRPLIEFLES+GKD KEKISRHDVT
Sbjct: 1   MDSFEWIESSGQQVCTPVRMKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVT 60

Query: 61  SIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120
           SI+NEYV+INNLLHPS+KKRI+CDDRLHSIFGRKTIGRIKIHDMLEPHFAENQ ESDDDF
Sbjct: 61  SIINEYVNINNLLHPSKKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQHESDDDF 120

Query: 121 SYSSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVED 180
           SYSSDETENL + LKR+NG TPGRKLSQKTRV VNPN+SFA++VPGNINLVYLRKSLVED
Sbjct: 121 SYSSDETENLFSVLKRDNGITPGRKLSQKTRVHVNPNSSFAAVVPGNINLVYLRKSLVED 180

Query: 181 LVKDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNV 240
           L+KDHETFESKLIGSFVRI+SDPHDYLQKNTHQLVQV G+KK+SI GDLG  FLLHVSNV
Sbjct: 181 LLKDHETFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGLKKISISGDLGPGFLLHVSNV 240

Query: 241 MKDVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQ 282
           MKDV I MLSDE FSEEECKDLDLR+K+GLVKRLTI  + +
Sbjct: 241 MKDVSISMLSDENFSEEECKDLDLRIKNGLVKRLTIVHLDE 281

[Close]

BLAST of CmaCh19G011240 vs. TrEMBL
Match: A0A061DK51_THECC (Binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_001638 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 4.7e-133
Identity = 270/577 (46.79%), Postives = 371/577 (64.30%), Query Frame = 1


Query: 7   IESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEY 66
           +E    +  TP  +KRK+RS+K EFVGWGS+PLIEFLESIGKDT ++IS+HDVT I+ +Y
Sbjct: 11  LEEHSGKPATPASLKRKVRSRKLEFVGWGSKPLIEFLESIGKDTTKQISQHDVTDIIRKY 70

Query: 67  VSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDE 126
           V+ NNL+HP++KKRI+CD+RL+SIFGRK IGR+K++D+LE H+AENQD   D FS  SDE
Sbjct: 71  VNDNNLVHPAKKKRILCDERLYSIFGRKAIGRMKVYDLLETHYAENQDAWSDGFSSMSDE 130

Query: 127 TENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVEDLVKDHE 186
            +      + +      RK  QK +V+  P + FA++V  NI LVYL+KSLV+DL+KD E
Sbjct: 131 DD----VGEEQKSVISERKAYQKKKVIETPKSCFAAIVQDNIKLVYLKKSLVQDLLKDPE 190

Query: 187 TFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKDVGI 246
            FE+K++GSFVRI+SDP+ YLQ+N+HQLV V G+KK S   D+ T  LL VSN +KDV +
Sbjct: 191 RFEAKVVGSFVRIKSDPNYYLQQNSHQLVLVKGLKKASGNNDINTDILLQVSNFVKDVNL 250

Query: 247 GMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLI 306
            MLSD+ F++EEC+DL  RVK+GL+KRLTI E++ K   LH DITKHWLS EI+LLQ LI
Sbjct: 251 SMLSDDNFAQEECEDLHQRVKNGLLKRLTIVELEAKARILHEDITKHWLSAEITLLQKLI 310

Query: 307 DQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEF----QGIYGSANQGD 366
           D+ANEKGWR+EL +Y+E++ LL T EEQS++  E+P VIA+E +     Q   G   + D
Sbjct: 311 DRANEKGWRRELFEYMERRELLMTPEEQSQLLLEVPNVIAEEIDIETAPQDFPGDEQEND 370

Query: 367 NVTNEGDETKLQVRREVSDDTNQGETVFGSNPNV---------------DIYVAENRTAA 426
           N       + L+   ++  DT  G  +    P+                D   +++   +
Sbjct: 371 NSL----VSTLKGTSDIPSDTALGGKLSTLMPSTIEEIELETAPQDIPDDKQESDSSLVS 430

Query: 427 SMSNVEEFAECRR----------SVLDE-----EQPPQPVESTYNSSLNETELIN-EVDK 486
           ++    +    R           S +D      EQP +P +S Y  +    +L++  V  
Sbjct: 431 TLKGTSDIPSDRALDGKLSTLMPSTIDNQHDVHEQPKRPRDSNYARA----QLVDIPVKD 490

Query: 487 GWLANEQ---IKESRVINLSDDDELPRGEELDWNSTLRSLIWYYLDPQGDVQGPFCLASL 546
           G++  +    I  ++VI+LSDDDE     E+     + SL+W+Y DP+G  QGPF L SL
Sbjct: 491 GYIEKQSFVNISNTQVIDLSDDDE--DSNEVQALDGVNSLMWHYSDPRGYEQGPFSLKSL 550

[Close]

BLAST of CmaCh19G011240 vs. TrEMBL
Match: A0A0D2RN86_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172400 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 2.4e-129
Identity = 267/555 (48.11%), Postives = 368/555 (66.31%), Query Frame = 1


Query: 3   SLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSI 62
           S+  +E    +  TPV  KRK +SKK EF GWGS+PLIEFLESIGKDT EKIS+HDV+ I
Sbjct: 7   SIFWLEEYSGKSLTPVGSKRKAKSKKLEFNGWGSKPLIEFLESIGKDTTEKISQHDVSDI 66

Query: 63  VNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSY 122
           + +Y++ NNL +P++KKR++CD+RL+SIFGRKTI RIK++D+LE H+ ENQD  DDDF +
Sbjct: 67  IGKYINDNNLTNPAKKKRVLCDERLYSIFGRKTISRIKVYDLLETHYLENQDAWDDDFFF 126

Query: 123 SSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVEDLV 182
           SS+E ENL    K    +   +K  QK R    P + FA+++P NI LVYL+KSLV DL 
Sbjct: 127 SSEE-ENLGEEKKCLRLE---KKTYQKKRGFETPKSCFAAIIPENIKLVYLKKSLVLDLS 186

Query: 183 KDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMK 242
           KD  +FE+K++ SFVRI+SDP+++LQKN+HQLV V G+KKVS   D+    LL VSN +K
Sbjct: 187 KDFGSFEAKVVDSFVRIKSDPNNFLQKNSHQLVIVKGMKKVSGNNDVNADILLQVSNFVK 246

Query: 243 DVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLL 302
           DV I MLS++ FS+EEC+DL  R+K GL+KR T+AE++ K  ALH DITKHWL+ E++LL
Sbjct: 247 DVRIAMLSEDDFSQEECEDLHQRMKKGLLKRPTVAELEAKARALHEDITKHWLAAELTLL 306

Query: 303 QNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQGD 362
             LID+ANEKGWR+E+ +Y+E++ LLQT EEQSR+  E+P VIA+E E + +        
Sbjct: 307 PKLIDRANEKGWRREMFEYMERRQLLQTPEEQSRLLCEVPNVIAEEVEPETV------PQ 366

Query: 363 NVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRRSV 422
           +V +E D +++   RE  +          SNP        N   +++  ++  A+    +
Sbjct: 367 DVKHEKDSSQISTVRETLE--------IPSNP------VSNGKLSTLLPLKPVAQSSPII 426

Query: 423 LD---------EEQPPQPVESTYNSSLNETELINEVDKGWLANEQIK---ESRVINLSDD 482
           L          +EQ  +P ++   S+  +   + E +   + ++ +K    ++VI+LSDD
Sbjct: 427 LKDDTVHCHDVQEQLIRPRDNNVRST--QVGNVPEENGAIVKHDFLKALDTTQVIDLSDD 486

Query: 483 DELPRGEELDWNST-----LRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWK 541
           D     E  D N T     +RSLIW+Y DPQGD+QGPF L SLKNW D DYFP DFKVWK
Sbjct: 487 DNDDNEEHEDSNKTEAQDDVRSLIWHYQDPQGDIQGPFSLLSLKNWMDLDYFPDDFKVWK 535

[Close]

BLAST of CmaCh19G011240 vs. TrEMBL
Match: A0A0D2PUH6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172400 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.6e-128
Identity = 266/546 (48.72%), Postives = 365/546 (66.85%), Query Frame = 1


Query: 3   SLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSI 62
           S+  +E    +  TPV  KRK +SKK EF GWGS+PLIEFLESIGKDT EKIS+HDV+ I
Sbjct: 7   SIFWLEEYSGKSLTPVGSKRKAKSKKLEFNGWGSKPLIEFLESIGKDTTEKISQHDVSDI 66

Query: 63  VNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSY 122
           + +Y++ NNL +P++KKR++CD+RL+SIFGRKTI RIK++D+LE H+ ENQD  DDDF +
Sbjct: 67  IGKYINDNNLTNPAKKKRVLCDERLYSIFGRKTISRIKVYDLLETHYLENQDAWDDDFFF 126

Query: 123 SSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVEDLV 182
           SS+E ENL    K    +   +K  QK R    P + FA+++P NI LVYL+KSLV DL 
Sbjct: 127 SSEE-ENLGEEKKCLRLE---KKTYQKKRGFETPKSCFAAIIPENIKLVYLKKSLVLDLS 186

Query: 183 KDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMK 242
           KD  +FE+K++ SFVRI+SDP+++LQKN+HQLV V G+KKVS   D+    LL VSN +K
Sbjct: 187 KDFGSFEAKVVDSFVRIKSDPNNFLQKNSHQLVIVKGMKKVSGNNDVNADILLQVSNFVK 246

Query: 243 DVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLL 302
           DV I MLS++ FS+EEC+DL  R+K GL+KR T+AE++ K  ALH DITKHWL+ E++LL
Sbjct: 247 DVRIAMLSEDDFSQEECEDLHQRMKKGLLKRPTVAELEAKARALHEDITKHWLAAELTLL 306

Query: 303 QNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQGD 362
             LID+ANEKGWR+E+ +Y+E++ LLQT EEQSR+  E+P VIA+E E + +        
Sbjct: 307 PKLIDRANEKGWRREMFEYMERRQLLQTPEEQSRLLCEVPNVIAEEVEPETV------PQ 366

Query: 363 NVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRRSV 422
           +V +E D +++   RE  +          SNP        N   +++  ++    C    
Sbjct: 367 DVKHEKDSSQISTVRETLE--------IPSNP------VSNGKLSTLLPLKP-VHCHDV- 426

Query: 423 LDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIKE---SRVINLSDDDELPRGEEL 482
             +EQ  +P ++   S+  +   + E +   + ++ +K    ++VI+LSDDD     E  
Sbjct: 427 --QEQLIRPRDNNVRST--QVGNVPEENGAIVKHDFLKALDTTQVIDLSDDDNDDNEEHE 486

Query: 483 DWNST-----LRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAV 541
           D N T     +RSLIW+Y DPQGD+QGPF L SLKNW D DYFP DFKVWK GQ  + AV
Sbjct: 487 DSNKTEAQDDVRSLIWHYQDPQGDIQGPFSLLSLKNWMDLDYFPDDFKVWKTGQNLNNAV 522

[Close]

BLAST of CmaCh19G011240 vs. TrEMBL
Match: A0A0D2RN81_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172400 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 2.0e-128
Identity = 262/546 (47.99%), Postives = 366/546 (67.03%), Query Frame = 1


Query: 3   SLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSI 62
           S+  +E    +  TPV  KRK +SKK EF GWGS+PLIEFLESIGKDT EKIS+HDV+ I
Sbjct: 7   SIFWLEEYSGKSLTPVGSKRKAKSKKLEFNGWGSKPLIEFLESIGKDTTEKISQHDVSDI 66

Query: 63  VNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSY 122
           + +Y++ NNL +P++KKR++CD+RL+SIFGRKTI RIK++D+LE H+ ENQD  DDDF +
Sbjct: 67  IGKYINDNNLTNPAKKKRVLCDERLYSIFGRKTISRIKVYDLLETHYLENQDAWDDDFFF 126

Query: 123 SSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVEDLV 182
           SS+E ENL    K    +   +K  QK R    P + FA+++P NI LVYL+KSLV DL 
Sbjct: 127 SSEE-ENLGEEKKCLRLE---KKTYQKKRGFETPKSCFAAIIPENIKLVYLKKSLVLDLS 186

Query: 183 KDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMK 242
           KD  +FE+K++ SFVRI+SDP+++LQKN+HQLV V G+KKVS   D+    LL VSN +K
Sbjct: 187 KDFGSFEAKVVDSFVRIKSDPNNFLQKNSHQLVIVKGMKKVSGNNDVNADILLQVSNFVK 246

Query: 243 DVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLL 302
           DV I MLS++ FS+EEC+DL  R+K GL+KR T+AE++ K  ALH DITKHWL+ E++LL
Sbjct: 247 DVRIAMLSEDDFSQEECEDLHQRMKKGLLKRPTVAELEAKARALHEDITKHWLAAELTLL 306

Query: 303 QNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQGD 362
             LID+ANEKGWR+E+ +Y+E++ LLQT EEQSR+  E+P VIA+E E + +        
Sbjct: 307 PKLIDRANEKGWRREMFEYMERRQLLQTPEEQSRLLCEVPNVIAEEVEPETV------PQ 366

Query: 363 NVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRRSV 422
           +V +E D +++   RE  +  +   +    +  + +       ++ +   ++   C    
Sbjct: 367 DVKHEKDSSQISTVRETLEIPSNPVSNGKLSTLLPLKPGNVAQSSPIILKDDTVHCHDV- 426

Query: 423 LDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIK---ESRVINLSDDDELPRGEEL 482
             +EQ  +P ++   S+  +   + E +   + ++ +K    ++VI+LSDDD     E  
Sbjct: 427 --QEQLIRPRDNNVRST--QVGNVPEENGAIVKHDFLKALDTTQVIDLSDDDNDDNEEHE 486

Query: 483 DWNST-----LRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAV 541
           D N T     +RSLIW+Y DPQGD+QGPF L SLKNW D DYFP DFKVWK GQ  + AV
Sbjct: 487 DSNKTEAQDDVRSLIWHYQDPQGDIQGPFSLLSLKNWMDLDYFPDDFKVWKTGQNLNNAV 537

[Close]

BLAST of CmaCh19G011240 vs. TAIR10
Match: AT5G08430.1 (AT5G08430.1 SWIB/MDM2 domain;Plus-3;GYF)

HSP 1 Score: 416.8 bits (1070), Expect = 2.1e-116
Identity = 252/556 (45.32%), Postives = 338/556 (60.79%), Query Frame = 1


Query: 21  KRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSRKKR 80
           KRK R K++EFVGWGSR LIEFL S+GKDT E ISR+DV+  + +Y+S   LL PS KK+
Sbjct: 19  KRKARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKK 78

Query: 81  IVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLLNTLKRENGK 140
           +VCD RL  +FG +TI R+K++D+LE H+ ENQD+SD DF Y  DE + + ++       
Sbjct: 79  VVCDKRLVLLFGTRTIFRMKVYDLLEKHYKENQDDSDFDFLYE-DEPQIICHS------- 138

Query: 141 TPGRKLSQKT-RVLVNPNTSFASMVPGNINLVYLRKSLVEDLVKDHETFESKLIGSFVRI 200
               K++++T +V+  P  +FA++V  NI L+YLRKSLV++L+K  +TFE K++GSFVRI
Sbjct: 139 ---EKIAKRTSKVVKKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEGKMLGSFVRI 198

Query: 201 RSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKDVGIGMLSDEKFSEEEC 260
           +SDP+DYLQK  +QLVQVTGVKK     D    FLL V+N +KDV I +LSD+ FS+EEC
Sbjct: 199 KSDPNDYLQKYPYQLVQVTGVKKEHGTDD----FLLQVTNYVKDVSISVLSDDNFSQEEC 258

Query: 261 KDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLIDQANEKGWRKELD 320
           +DL  R+K+GL+K+ TI E+++K + LH D TKHWL REI LL+ LID+ANEKGWR+EL 
Sbjct: 259 EDLHQRIKNGLLKKPTIVEMEEKAKKLHKDQTKHWLGREIELLKRLIDRANEKGWRRELS 318

Query: 321 QYLEKKLLLQTAEEQSRIFREIPQVIADE----PEFQGIYGSANQGDNVTNEGDETKLQV 380
           +YL+K+ LLQ  +EQ+R+ RE+P+VI +E    PE       A++ DN      E+ L  
Sbjct: 319 EYLDKRELLQNPDEQARLLREVPEVIGEELVQNPEVSS--PEAHKSDN-EQRLSESPLSC 378

Query: 381 RREVSDDTNQGETVFG------------SNPNVDIYVAENRTAASMSNVEEFAECRRSVL 440
             E    T +   +FG            SNP     +    T  +       A      L
Sbjct: 379 IHE----TPEARNLFGGEDQQFNNGYVMSNPITTPGITSCATEINKGLPTWIASAGAEYL 438

Query: 441 --DEEQPPQ-------PVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELP 500
             D EQP         P E +  S L  +  +N VD G  +  Q   S VI LSDDDE  
Sbjct: 439 HVDVEQPANGIIGGETPTEESKVSQLQSSIPVNNVDNG--SQVQPNPSEVIELSDDDEDD 498

Query: 501 R--GEELD--------WNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVW 541
              GE LD         +     L W Y DPQG VQGPF L  LK W DA+YF   F+VW
Sbjct: 499 NGDGETLDPKVEDVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVW 550

[Close]

BLAST of CmaCh19G011240 vs. TAIR10
Match: AT5G63700.1 (AT5G63700.1 zinc ion binding;DNA binding)

HSP 1 Score: 261.9 bits (668), Expect = 8.6e-70
Identity = 133/341 (39.00%), Postives = 221/341 (64.81%), Query Frame = 1


Query: 18  VRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSR 77
           V  K+  ++K+ EF+ WGS+PLI+FL SIG+DT+E +S+H V S++  Y+   NLL   +
Sbjct: 246 VDYKKVGKNKRMEFIRWGSKPLIDFLTSIGEDTREAMSQHSVESVIRRYIREKNLLDREK 305

Query: 78  KKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESD-----------DDFSYSSDE 137
           KK++ CD++L+SIF +K+I + +I+ +L  H  EN D+ +            +    S++
Sbjct: 306 KKKVHCDEKLYSIFRKKSINQKRIYTLLNTHLKENLDQVEYFTPLELGFIEKNEKRFSEK 365

Query: 138 TENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVEDLVKDHE 197
            + ++   K++  ++   ++ +K        T FA++   N+ LVYLRKSLV +L+K ++
Sbjct: 366 NDKVMMPCKKQKTESSDDEICEKEVQPEMRATGFATINADNLKLVYLRKSLVLELLKQND 425

Query: 198 TFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKDVGI 257
           +F  K++GSFV++++ P D++    +Q++QVTG+K      D     LLHVS +   V I
Sbjct: 426 SFVDKVVGSFVKVKNGPRDFM---AYQILQVTGIKNAD---DQSEGVLLHVSGMASGVSI 485

Query: 258 GMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLI 317
             L D    EEE KDL  +V +GL+++ T+ E++QK +ALH DITKHW++R++++LQ  I
Sbjct: 486 SKLDDSDIREEEIKDLKQKVMNGLLRQTTVVEMEQKAKALHYDITKHWIARQLNILQKRI 545

Query: 318 DQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIAD 348
           + ANEKGWR+EL++YLE++ LL+   EQ R+ +EIP++I D
Sbjct: 546 NCANEKGWRRELEEYLEQRELLEKPSEQERLLKEIPRIIED 580

[Close]

BLAST of CmaCh19G011240 vs. TAIR10
Match: AT5G23480.1 (AT5G23480.1 SWIB/MDM2 domain;Plus-3;GYF)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-60
Identity = 183/588 (31.12%), Postives = 287/588 (48.81%), Query Frame = 1


Query: 21  KRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHP----S 80
           KR  + K  EFVGWGSR LIEFLES+G+DT  KIS +DVT+I+  Y+   +   P     
Sbjct: 14  KRLRKPKSLEFVGWGSRNLIEFLESLGRDTTNKISENDVTAIIMNYIREKSRETPLKSKK 73

Query: 81  RKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDES--DDDFSYSSDETENLLNTL 140
           R+K + CD++L  +FG   I  IK+ D++E H+ ENQ+E    DD   S D+ +  L+  
Sbjct: 74  RRKTVACDEKLRLLFGAGKINVIKVPDLVEKHYVENQEEDLFYDDLYASEDDKQQRLSL- 133

Query: 141 KRENGKTPGRKLSQKTRVLVN-PNTSFASMVPGNINLVYLRKSLVEDLVKDHETFESKLI 200
                     K++++T+ +V+ P  +FA++V   + L+YLRKSLV++L K  ETFESK++
Sbjct: 134 --------SDKVAKQTKQVVSKPRGTFAAIVRDTVKLLYLRKSLVQELAKTPETFESKVV 193

Query: 201 GSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKDVGIGMLSDEK 260
            +FVRI         KN  QLV VTGVK+   P D     + + S  +KDV    LSD+ 
Sbjct: 194 RTFVRI---------KNPCQLVHVTGVKEGD-PIDGNLFQVTNYSYYLKDVTTSSLSDDD 253

Query: 261 FSEEECKDLDLRVKSGLVKRLTIAEVQQKVEAL--------------------------- 320
           FS+EEC++L  R+ +G  KRLT+ ++++K  +L                           
Sbjct: 254 FSQEECEELHQRINNGFAKRLTVVDMEEKARSLHEDYLEKRELLQNPDEQKRLVDEVPEI 313

Query: 321 ---------HVDITKHWLSREISLLQNLIDQANEKGWRKELD------QYLEKKLLLQTA 380
                      D     +   + +      Q++++  +++L       +  E  LLL+  
Sbjct: 314 VAEELEPECEDDDDDRTIEDSLIVPNPEAHQSDKEQRQRDLPVSSSVKKSQENSLLLKNP 373

Query: 381 EEQSRIFREIPQVIAD--EPEFQGIYGSANQGDNVTNEGDETKL-QVRREVSDDTNQGET 440
           EEQ R+  ++P V+A+  EPEF    G       V N    T+  Q   E+        +
Sbjct: 374 EEQLRLLCDVPDVVAEKLEPEFVDDDGKLVNDATVPNPEAFTEAHQSDEEIQPSDLPDSS 433

Query: 441 VFGSNPNVDIYVAENRTAASMSNVEEFAECRRSVLDEEQPPQPVESTYNSSLNETELINE 500
           +  +  +  I+ A    +A   ++ E         D  +PP    +    S+ E E+  +
Sbjct: 434 IQKTLEDQPIWTA----SAGNKDLHE---------DVYEPPANGITLNTDSITEGEMNTK 493

Query: 501 VDKGW-------LANEQIKESRVINL------SDDDELPRGEELDWNSTLRSLIWYYLDP 542
           V +         L+N+    S  I +       DDDE  + ++   +   + ++W+Y  P
Sbjct: 494 VSQHQSSTPVIDLSNKTQAHSNPIEIIELSDDDDDDEKDKNDQAYQSYDPKKVMWFYEYP 553

[Close]

BLAST of CmaCh19G011240 vs. TAIR10
Match: AT2G16485.1 (AT2G16485.1 nucleic acid binding;zinc ion binding;DNA binding)

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-41
Identity = 108/347 (31.12%), Postives = 184/347 (53.03%), Query Frame = 1


Query: 30   EFVGWGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSRKKRIVCDDRLHS 89
            E + W S+ L++ +  + +  +  +   +V +++  Y+   NL  P RK +++CD RL +
Sbjct: 803  ETMEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQN 862

Query: 90   IFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLLNTLKRENGKTPGRKLSQK 149
            +FG+  +G  ++ ++L+ HF + +    DD      +TE   +    EN   P +    K
Sbjct: 863  LFGKSHVGHFEMLNLLDSHFLKKEQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDK 922

Query: 150  TRVLVNPNT---------SFASMVPGNINLVYLRKSLVEDLVKDHETFESKLIGSFVRIR 209
             R     N           FA++   NINL+YLR+SLVEDL++D   FE K+  +FVR+R
Sbjct: 923  KRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLR 982

Query: 210  SDPHDYLQKNTHQLVQVTGVKKVSIPGDLG---TRFLLHVSNVMKD--VGIGMLSDEKFS 269
               +   +++ ++LVQV G  K   P  +G   T ++L + N+ K   + I ++S++ F+
Sbjct: 983  ISGNQ--KQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFT 1042

Query: 270  EEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLIDQANEKGWR 329
            E+ECK L   +K GL+ RLT+ ++Q+K  AL     K+ L  EI    +L D+A++ G R
Sbjct: 1043 EDECKRLKQSIKCGLINRLTVGDIQEKAIALQEVRVKNLLEAEILRFSHLRDRASDMGRR 1102

Query: 330  KE---------------LDQYLEKKLLLQTAEEQSRIFREIPQVIAD 348
            KE               L + +EK  LL++ EE+ R   EIP++ AD
Sbjct: 1103 KEYPYLLKLSNSLTMLTLRECVEKLQLLKSPEERQRRLEEIPEIHAD 1147

[Close]

BLAST of CmaCh19G011240 vs. TAIR10
Match: AT3G51120.1 (AT3G51120.1 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding)

HSP 1 Score: 129.8 bits (325), Expect = 5.1e-30
Identity = 107/403 (26.55%), Postives = 191/403 (47.39%), Query Frame = 1


Query: 34  WGSRPLIEFLESIGKDTKEKISRHDVTSIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGR 93
           W ++ L+EF+  +       +S+ DV  ++ +Y+   NL  P +K +++CD  L  +FG+
Sbjct: 319 WATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGK 378

Query: 94  KTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLLNTLKRENGKTP-----GRKLSQ 153
           + +G  ++  +LE H    Q++     + + + T  + + ++ ++   P      RK+ +
Sbjct: 379 QRVGHFEMLKLLESHVL-IQEKPKGAKTTNGETTHAVPSQIEEDSVHDPMVRDRRRKMRR 438

Query: 154 KT--RVLVNPNTSFASMVPGNINLVYLRKSLVEDLVKDHETFESKLIGSFVRIRSDPHDY 213
           KT  RV      ++A++   NINL+YLR+  +E L+ D    + K++G+ +RI+    D 
Sbjct: 439 KTDGRVQNENLDAYAAIDVHNINLIYLRRKFLESLLDDINKVDEKVVGTILRIKVSGSDQ 498

Query: 214 LQKNTHQLVQVTGVKKVSIPGDLG---TRFLLHVSNVMKD--VGIGMLSDEKFSEEECKD 273
            + + H+LVQV G  K      LG   T  +L + N+ K   + I  LSD+  +E+ECK 
Sbjct: 499 -KLDIHRLVQVVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSDQNITEDECKR 558

Query: 274 LDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREISLLQNLIDQANEKGWRKELDQY 333
           L   +K GL KRLT+ ++ +    L        L  EI  L +L D+A            
Sbjct: 559 LRQSIKCGLNKRLTVVDILKTAATLQAMRINEALEAEILKLNHLRDRA------------ 618

Query: 334 LEKKLLLQTAEEQSRIFREIPQVIADE--------PEFQGI-------------YGSANQ 393
            +K  LL++ EE+ R+ +E+P+V  D          E  G+              G  N+
Sbjct: 619 -KKLELLKSPEERQRLLQEVPEVHTDPSMDPSHALSEDAGLGTRKQDNHVKAQSKGPQNK 678

Query: 394 GDNVTNEGDETK-------LQVRREVSDDTNQGETVFGSNPNV 397
           G N+ N G+  +       L+ R  V  D +    V  ++ N+
Sbjct: 679 GVNLNNVGNNVQKKYDAPILRSRNNVHADKDDCSKVHNNSSNI 706

[Close]

BLAST of CmaCh19G011240 vs. NCBI nr
Match: gi|659092443|ref|XP_008447064.1| (PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis melo])

HSP 1 Score: 875.5 bits (2261), Expect = 4.7e-251
Identity = 448/543 (82.50%), Postives = 480/543 (88.40%), Query Frame = 1


Query: 1   MDSLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVT 60
           MDS E IESS QQVCTPVRMKRKIRSK+YEFVGWGSRPLIEFLES+GKD KEKISRHDVT
Sbjct: 1   MDSFEWIESSGQQVCTPVRMKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVT 60

Query: 61  SIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120
           SI+NEYV+INNLLHPS+KKRI+CDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF
Sbjct: 61  SIINEYVNINNLLHPSKKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120

Query: 121 SYSSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVED 180
           SYSSDETENL + LKR+NG TPGRKLS KTRV VNPN+SFA++VPGNINL+YLRKSLVED
Sbjct: 121 SYSSDETENLFSVLKRDNGITPGRKLSLKTRVFVNPNSSFAAVVPGNINLLYLRKSLVED 180

Query: 181 LVKDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNV 240
           L+KDHETFESKLIGSFVRI+SDPHDYLQKNTHQLVQV GVKK+SI GDLG  FLLHVSNV
Sbjct: 181 LLKDHETFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLGPGFLLHVSNV 240

Query: 241 MKDVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREIS 300
           MKDV I MLSDE FSEEECKDLDLR+K+GLVKRLTIAEVQ+KVE LHVDITKHWLSREIS
Sbjct: 241 MKDVSISMLSDENFSEEECKDLDLRIKNGLVKRLTIAEVQRKVEVLHVDITKHWLSREIS 300

Query: 301 LLQNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQ 360
           LLQNLIDQANEKGWRKELDQYLEKK LLQ+A EQSRI REIPQVIADE EF GIY SA+Q
Sbjct: 301 LLQNLIDQANEKGWRKELDQYLEKKQLLQSAAEQSRILREIPQVIADETEFGGIYASADQ 360

Query: 361 GDNVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRR 420
            DNVT EGD+ KL V REVSDD  QGETVF SN  VD Y AEN T A M N+ E AE R+
Sbjct: 361 ADNVTKEGDDRKLLVTREVSDDRKQGETVFSSNSTVDTYGAENPTTALMFNLNENAESRQ 420

Query: 421 SVLDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELPRGEELD 480
             LD EQ PQPVE T + ++ ETE IN VDKG   NEQIKES VI+LSDDDE PR EE D
Sbjct: 421 VFLD-EQSPQPVECTCD-NVKETEPINAVDKGRQENEQIKESTVIDLSDDDEPPRTEEHD 480

Query: 481 WNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAVLLSDIL 540
           WN+ L+SLIW+YLDPQGDVQGPFCLASLKNWKDA+YFP DFKVWK GQTQDQAVLL+DIL
Sbjct: 481 WNNRLKSLIWHYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTQDQAVLLNDIL 540

Query: 541 SHF 544
           S F
Sbjct: 541 SPF 541

[Close]

BLAST of CmaCh19G011240 vs. NCBI nr
Match: gi|449461126|ref|XP_004148294.1| (PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis sativus])

HSP 1 Score: 875.2 bits (2260), Expect = 6.1e-251
Identity = 448/543 (82.50%), Postives = 479/543 (88.21%), Query Frame = 1


Query: 1   MDSLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVT 60
           MDS E IESS QQVCTPVRMKRKIRSK+YEFVGWGSRPLIEFLES+GKD KEKISRHDVT
Sbjct: 1   MDSFEWIESSGQQVCTPVRMKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVT 60

Query: 61  SIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120
           SI+NEYV+INNLLHPS+KKRI+CDDRLHSIFGRKTIGRIKIHDMLEPHFAENQ ESDDDF
Sbjct: 61  SIINEYVNINNLLHPSKKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQHESDDDF 120

Query: 121 SYSSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVED 180
           SYSSDETENL + LKR+NG TPGRKLSQKTRV VNPN+SFA++VPGNINLVYLRKSLVED
Sbjct: 121 SYSSDETENLFSVLKRDNGITPGRKLSQKTRVHVNPNSSFAAVVPGNINLVYLRKSLVED 180

Query: 181 LVKDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNV 240
           L+KDHETFESKLIGSFVRI+SDPHDYLQKNTHQLVQV G+KK+SI GDLG  FLLHVSNV
Sbjct: 181 LLKDHETFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGLKKISISGDLGPGFLLHVSNV 240

Query: 241 MKDVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREIS 300
           MKDV I MLSDE FSEEECKDLDLR+K+GLVKRLTIAEVQ+KVE LHVDITKHWLSREIS
Sbjct: 241 MKDVSISMLSDENFSEEECKDLDLRIKNGLVKRLTIAEVQRKVEVLHVDITKHWLSREIS 300

Query: 301 LLQNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQ 360
           LLQNLIDQANEKGWRKELDQYLEKK LLQ+A EQSRI REIPQVIADE EF GI+ SA+Q
Sbjct: 301 LLQNLIDQANEKGWRKELDQYLEKKQLLQSAAEQSRILREIPQVIADETEFGGIHASADQ 360

Query: 361 GDNVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRR 420
            DNVT EGDETKL   RE SDD  QGETVF SN NVD Y AEN T A M N+ E  E R+
Sbjct: 361 ADNVTKEGDETKLLDIREASDDRKQGETVFSSNSNVDTYGAENPTTALMFNLNENTESRQ 420

Query: 421 SVLDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELPRGEELD 480
             LD EQ  QPVE TYN  + E+E IN VDKG  ANEQIKES VI+LSDDDE PR EE D
Sbjct: 421 IFLD-EQAAQPVECTYNYFI-ESEPINAVDKGCQANEQIKESTVIDLSDDDEPPRAEEHD 480

Query: 481 WNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAVLLSDIL 540
           WN+ L+SLIWYYLDPQGDVQGPFCLASLKNWKDA+YFP DFKVW+ GQTQDQAVLL+DIL
Sbjct: 481 WNNKLKSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQAVLLNDIL 540

Query: 541 SHF 544
           S F
Sbjct: 541 SPF 541

[Close]

BLAST of CmaCh19G011240 vs. NCBI nr
Match: gi|659092441|ref|XP_008447063.1| (PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis melo])

HSP 1 Score: 869.0 bits (2244), Expect = 4.4e-249
Identity = 448/549 (81.60%), Postives = 480/549 (87.43%), Query Frame = 1


Query: 1   MDSLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVT 60
           MDS E IESS QQVCTPVRMKRKIRSK+YEFVGWGSRPLIEFLES+GKD KEKISRHDVT
Sbjct: 1   MDSFEWIESSGQQVCTPVRMKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVT 60

Query: 61  SIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120
           SI+NEYV+INNLLHPS+KKRI+CDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF
Sbjct: 61  SIINEYVNINNLLHPSKKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120

Query: 121 SYSSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVED 180
           SYSSDETENL + LKR+NG TPGRKLS KTRV VNPN+SFA++VPGNINL+YLRKSLVED
Sbjct: 121 SYSSDETENLFSVLKRDNGITPGRKLSLKTRVFVNPNSSFAAVVPGNINLLYLRKSLVED 180

Query: 181 LVKDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNV 240
           L+KDHETFESKLIGSFVRI+SDPHDYLQKNTHQLVQV GVKK+SI GDLG  FLLHVSNV
Sbjct: 181 LLKDHETFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLGPGFLLHVSNV 240

Query: 241 MKDVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKH------W 300
           MKDV I MLSDE FSEEECKDLDLR+K+GLVKRLTIAEVQ+KVE LHVDITKH      W
Sbjct: 241 MKDVSISMLSDENFSEEECKDLDLRIKNGLVKRLTIAEVQRKVEVLHVDITKHCYVSFQW 300

Query: 301 LSREISLLQNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGI 360
           LSREISLLQNLIDQANEKGWRKELDQYLEKK LLQ+A EQSRI REIPQVIADE EF GI
Sbjct: 301 LSREISLLQNLIDQANEKGWRKELDQYLEKKQLLQSAAEQSRILREIPQVIADETEFGGI 360

Query: 361 YGSANQGDNVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEE 420
           Y SA+Q DNVT EGD+ KL V REVSDD  QGETVF SN  VD Y AEN T A M N+ E
Sbjct: 361 YASADQADNVTKEGDDRKLLVTREVSDDRKQGETVFSSNSTVDTYGAENPTTALMFNLNE 420

Query: 421 FAECRRSVLDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELP 480
            AE R+  LD EQ PQPVE T + ++ ETE IN VDKG   NEQIKES VI+LSDDDE P
Sbjct: 421 NAESRQVFLD-EQSPQPVECTCD-NVKETEPINAVDKGRQENEQIKESTVIDLSDDDEPP 480

Query: 481 RGEELDWNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAV 540
           R EE DWN+ L+SLIW+YLDPQGDVQGPFCLASLKNWKDA+YFP DFKVWK GQTQDQAV
Sbjct: 481 RTEEHDWNNRLKSLIWHYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTQDQAV 540

Query: 541 LLSDILSHF 544
           LL+DILS F
Sbjct: 541 LLNDILSPF 547

[Close]

BLAST of CmaCh19G011240 vs. NCBI nr
Match: gi|659092447|ref|XP_008447066.1| (PREDICTED: uncharacterized protein At5g08430 isoform X4 [Cucumis melo])

HSP 1 Score: 835.9 bits (2158), Expect = 4.1e-239
Identity = 433/543 (79.74%), Postives = 464/543 (85.45%), Query Frame = 1


Query: 1   MDSLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVT 60
           MDS E IESS QQVCTPVRMKRKIRSK+YEFVGWGSRPLIEFLES+GKD KEKISRHDVT
Sbjct: 1   MDSFEWIESSGQQVCTPVRMKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVT 60

Query: 61  SIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120
           SI+NEYV+INNLLHPS+KKRI+CDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF
Sbjct: 61  SIINEYVNINNLLHPSKKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120

Query: 121 SYSSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVED 180
           SYSSDETENL + LKR+NG TPGRKLS KTRV VNPN+SFA++VPGNINL+YLRKSLVED
Sbjct: 121 SYSSDETENLFSVLKRDNGITPGRKLSLKTRVFVNPNSSFAAVVPGNINLLYLRKSLVED 180

Query: 181 LVKDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNV 240
           L+KDHETFESKLIGSFVRI+SDPHDYLQKNTHQLVQV GVKK+SI GDLG  FLLHVSNV
Sbjct: 181 LLKDHETFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLGPGFLLHVSNV 240

Query: 241 MKDVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREIS 300
           MKDV I MLSDE FSEEECKDLDLR+K+GLVKRLTI                 WLSREIS
Sbjct: 241 MKDVSISMLSDENFSEEECKDLDLRIKNGLVKRLTI-----------------WLSREIS 300

Query: 301 LLQNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQ 360
           LLQNLIDQANEKGWRKELDQYLEKK LLQ+A EQSRI REIPQVIADE EF GIY SA+Q
Sbjct: 301 LLQNLIDQANEKGWRKELDQYLEKKQLLQSAAEQSRILREIPQVIADETEFGGIYASADQ 360

Query: 361 GDNVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRR 420
            DNVT EGD+ KL V REVSDD  QGETVF SN  VD Y AEN T A M N+ E AE R+
Sbjct: 361 ADNVTKEGDDRKLLVTREVSDDRKQGETVFSSNSTVDTYGAENPTTALMFNLNENAESRQ 420

Query: 421 SVLDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELPRGEELD 480
             LD EQ PQPVE T + ++ ETE IN VDKG   NEQIKES VI+LSDDDE PR EE D
Sbjct: 421 VFLD-EQSPQPVECTCD-NVKETEPINAVDKGRQENEQIKESTVIDLSDDDEPPRTEEHD 480

Query: 481 WNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAVLLSDIL 540
           WN+ L+SLIW+YLDPQGDVQGPFCLASLKNWKDA+YFP DFKVWK GQTQDQAVLL+DIL
Sbjct: 481 WNNRLKSLIWHYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTQDQAVLLNDIL 524

Query: 541 SHF 544
           S F
Sbjct: 541 SPF 524

[Close]

BLAST of CmaCh19G011240 vs. NCBI nr
Match: gi|778726122|ref|XP_011659060.1| (PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis sativus])

HSP 1 Score: 835.1 bits (2156), Expect = 7.0e-239
Identity = 433/543 (79.74%), Postives = 463/543 (85.27%), Query Frame = 1


Query: 1   MDSLECIESSRQQVCTPVRMKRKIRSKKYEFVGWGSRPLIEFLESIGKDTKEKISRHDVT 60
           MDS E IESS QQVCTPVRMKRKIRSK+YEFVGWGSRPLIEFLES+GKD KEKISRHDVT
Sbjct: 1   MDSFEWIESSGQQVCTPVRMKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVT 60

Query: 61  SIVNEYVSINNLLHPSRKKRIVCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDF 120
           SI+NEYV+INNLLHPS+KKRI+CDDRLHSIFGRKTIGRIKIHDMLEPHFAENQ ESDDDF
Sbjct: 61  SIINEYVNINNLLHPSKKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQHESDDDF 120

Query: 121 SYSSDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFASMVPGNINLVYLRKSLVED 180
           SYSSDETENL + LKR+NG TPGRKLSQKTRV VNPN+SFA++VPGNINLVYLRKSLVED
Sbjct: 121 SYSSDETENLFSVLKRDNGITPGRKLSQKTRVHVNPNSSFAAVVPGNINLVYLRKSLVED 180

Query: 181 LVKDHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNV 240
           L+KDHETFESKLIGSFVRI+SDPHDYLQKNTHQLVQV G+KK+SI GDLG  FLLHVSNV
Sbjct: 181 LLKDHETFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGLKKISISGDLGPGFLLHVSNV 240

Query: 241 MKDVGIGMLSDEKFSEEECKDLDLRVKSGLVKRLTIAEVQQKVEALHVDITKHWLSREIS 300
           MKDV I MLSDE FSEEECKDLDLR+K+GLVKRLTI                 WLSREIS
Sbjct: 241 MKDVSISMLSDENFSEEECKDLDLRIKNGLVKRLTI-----------------WLSREIS 300

Query: 301 LLQNLIDQANEKGWRKELDQYLEKKLLLQTAEEQSRIFREIPQVIADEPEFQGIYGSANQ 360
           LLQNLIDQANEKGWRKELDQYLEKK LLQ+A EQSRI REIPQVIADE EF GI+ SA+Q
Sbjct: 301 LLQNLIDQANEKGWRKELDQYLEKKQLLQSAAEQSRILREIPQVIADETEFGGIHASADQ 360

Query: 361 GDNVTNEGDETKLQVRREVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRR 420
            DNVT EGDETKL   RE SDD  QGETVF SN NVD Y AEN T A M N+ E  E R+
Sbjct: 361 ADNVTKEGDETKLLDIREASDDRKQGETVFSSNSNVDTYGAENPTTALMFNLNENTESRQ 420

Query: 421 SVLDEEQPPQPVESTYNSSLNETELINEVDKGWLANEQIKESRVINLSDDDELPRGEELD 480
             LD EQ  QPVE TYN  + E+E IN VDKG  ANEQIKES VI+LSDDDE PR EE D
Sbjct: 421 IFLD-EQAAQPVECTYNYFI-ESEPINAVDKGCQANEQIKESTVIDLSDDDEPPRAEEHD 480

Query: 481 WNSTLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAVLLSDIL 540
           WN+ L+SLIWYYLDPQGDVQGPFCLASLKNWKDA+YFP DFKVW+ GQTQDQAVLL+DIL
Sbjct: 481 WNNKLKSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQAVLLNDIL 524

Query: 541 SHF 544
           S F
Sbjct: 541 SPF 524

The following BLAST results are available for this feature:

BLAST of CmaCh19G011240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5843_ARATH	3.7e-115	45.32	Uncharacterized protein At5g08430 OS=Arabidopsis thaliana GN=At5g08430 PE=1 SV=2	[more]
C3H19_ARATH	3.0e-40	31.12	Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE...	[more]
C3H44_ARATH	9.1e-29	26.55	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana GN=At3g511...	[more]

BLAST of CmaCh19G011240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3N2_CUCSA	1.0e-135	86.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G252670 PE=4 SV=1	[more]
A0A061DK51_THECC	4.7e-133	46.79	Binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_001638 PE=4 SV=1	[more]
A0A0D2RN86_GOSRA	2.4e-129	48.11	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172400 PE=4 SV=1	[more]
A0A0D2PUH6_GOSRA	1.6e-128	48.72	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172400 PE=4 SV=1	[more]
A0A0D2RN81_GOSRA	2.0e-128	47.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172400 PE=4 SV=1	[more]

BLAST of CmaCh19G011240 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08430.1	2.1e-116	45.32	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT5G63700.1	8.6e-70	39.00	zinc ion binding;DNA binding	[more]
AT5G23480.1	2.1e-60	31.12	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT2G16485.1	1.7e-41	31.12	nucleic acid binding;zinc ion binding;DNA binding	[more]
AT3G51120.1	5.1e-30	26.55	DNA binding;zinc ion binding;nucleic acid binding;nucleic acid bindi...	[more]

BLAST of CmaCh19G011240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092443\|ref\|XP_008447064.1\|	4.7e-251	82.50	PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis melo]	[more]
gi\|449461126\|ref\|XP_004148294.1\|	6.1e-251	82.50	PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis sativus]	[more]
gi\|659092441\|ref\|XP_008447063.1\|	4.4e-249	81.60	PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis melo]	[more]
gi\|659092447\|ref\|XP_008447066.1\|	4.1e-239	79.74	PREDICTED: uncharacterized protein At5g08430 isoform X4 [Cucumis melo]	[more]
gi\|778726122\|ref\|XP_011659060.1\|	7.0e-239	79.74	PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003121	SWIB_MDM2_domain
IPR003169	GYF
IPR004343	Plus-3_dom
IPR019835	SWIB_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0016570	histone modification
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G011240.1	CmaCh19G011240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003121	SWIB/MDM2 domain	GENE3D	G3DSA:1.10.245.10		coord: 22..118 score: 4.5
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 38..109 score: 1.1
IPR003121	SWIB/MDM2 domain	unknown	SSF47592	SWIB/MDM2 domain	coord: 24..114 score: 3.71
IPR003169	GYF domain	GENE3D	G3DSA:3.30.1490.40		coord: 489..542 score: 1.2
IPR003169	GYF domain	PFAM	PF02213	GYF	coord: 489..532 score: 8.9
IPR003169	GYF domain	SMART	SM00444	gyf_5	coord: 488..544 score: 2.
IPR003169	GYF domain	PROFILE	PS50829	GYF	coord: 487..541 score: 13
IPR003169	GYF domain	unknown	SSF55277	GYF domain	coord: 484..542 score: 5.75
IPR004343	Plus-3 domain	PFAM	PF03126	Plus-3	coord: 167..262 score: 1.5
IPR004343	Plus-3 domain	SMART	SM00719	rtf1	coord: 162..268 score: 2.7
IPR004343	Plus-3 domain	PROFILE	PS51360	PLUS3	coord: 162..291 score: 21
IPR004343	Plus-3 domain	unknown	SSF159042	Plus3-like	coord: 165..287 score: 3.53
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 36..114 score: 0.
None	No IPR available	PANTHER	PTHR14445	GRB10 INTERACTING GYF PROTEIN	coord: 302..545 score: 3.2E-101coord: 7..125 score: 3.2E-101coord: 168..279 score: 3.2E
None	No IPR available	PANTHER	PTHR14445:SF39	SWIB/MDM2, PLUS-3 AND GYF DOMAIN-CONTAINING PROTEIN-RELATED	coord: 168..279 score: 3.2E-101coord: 302..545 score: 3.2E-101coord: 7..125 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G011240	Cla005474	Watermelon (97103) v1	cmawmB470
CmaCh19G011240	Csa7G252670	Cucumber (Chinese Long) v2	cmacuB529
CmaCh19G011240	MELO3C012577	Melon (DHL92) v3.5.1	cmameB464
CmaCh19G011240	ClCG09G022920	Watermelon (Charleston Gray)	cmawcgB439
CmaCh19G011240	CSPI07G11180	Wild cucumber (PI 183967)	cmacpiB535
CmaCh19G011240	CmoCh19G011550	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G011240	Lsi11G015790	Bottle gourd (USVL1VR-Ls)	cmalsiB474
CmaCh19G011240	Cp4.1LG15g09090	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G011240	MELO3C012577.2	Melon (DHL92) v3.6.1	cmamedB537
CmaCh19G011240	CsaV3_7G023180	Cucumber (Chinese Long) v3	cmacucB0640
CmaCh19G011240	Cla97C09G184490	Watermelon (97103) v2	cmawmbB547
CmaCh19G011240	Bhi05G001699	Wax gourd	cmawgoB0654
CmaCh19G011240	CsGy7G010560	Cucumber (Gy14) v2	cgybcmaB946

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G011240	Silver-seed gourd	carcmaB0745