CmaCh19G009950 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G009950
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionZinc finger CCCH domain protein
LocationCma_Chr19 : 8638814 .. 8639905 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAGTGTTTGTGCTGAGGAACAGAAATTTCAGTTTCAATTTCAACTGCCTTCTTCTTGTTCTTCGATTCTTGAGGACATTAACGGTGAAATGTGCTCTGATTCGCCGCGATTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTCAACGGCGAGGATGTAGCGGAAGAAGACGGCGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGTGGCGGTGTACTCGTAGTCGGAGCCATGACTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCGCGGCGACGAGATCCTCGTCGGTTTCATTACTCCGGCACGATGTGTCCGGATTTTCGACGCGGCGGTTGTGACCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTCGAGTGTTGGCTTCATCCAGCGAGATATCGGACCGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAAGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCGCCGATGAGTAATTTTCAAGGCGGCTCTTGTTCTTCGCCGAATAAGAGGAATTCTACTCTCAGATCGGCCGCCGCTGGTTCGAACCACGGCTGTTTATTTTGCCATTGCGGCGGAGCCGCCACTTCCTCGCCGACATCAACGCTTATCGGAATGTCTCATCTCTCCCCGCCACTCTCTCCGCCACTCTCGCCTGTAAAACCTCAGTCGCTAAATGGATTTTCACCGATTTCGAGGTACAATCCAGATCCGTCCAAGTTAAATGGAGTAATAAGCTATAAAGATTCAATGACCGAGCTCATGAACTCAATTGAATCCATGAATATCGACGAATTGAACGCCACTTTAGCCGCCTCCGCCTCAAGACAGACGATTCCTTGGATCGACGTTTCGTCTCTCAACACTGAAGAACAACTCCAGTTTGTTCTCTCACCTTCCACTCCAAATGTCTCCGCCGCATCGGTGAACTTTTCCGTCAATAACAAAGGTAACGCCGACAATGGATGGGCCTCCGCCTCTGCCTCCGCCTCGGATCCGGATCTCGGATGGGTTAACGATCTTCTGATGTAA

mRNA sequence

ATGAGCAGTGTTTGTGCTGAGGAACAGAAATTTCAGTTTCAATTTCAACTGCCTTCTTCTTGTTCTTCGATTCTTGAGGACATTAACGGTGAAATGTGCTCTGATTCGCCGCGATTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTCAACGGCGAGGATGTAGCGGAAGAAGACGGCGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGTGGCGGTGTACTCGTAGTCGGAGCCATGACTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCGCGGCGACGAGATCCTCGTCGGTTTCATTACTCCGGCACGATGTGTCCGGATTTTCGACGCGGCGGTTGTGACCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTCGAGTGTTGGCTTCATCCAGCGAGATATCGGACCGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAAGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCGCCGATGAGTAATTTTCAAGGCGGCTCTTGTTCTTCGCCGAATAAGAGGAATTCTACTCTCAGATCGGCCGCCGCTGGTTCGAACCACGGCTGTTTATTTTGCCATTGCGGCGGAGCCGCCACTTCCTCGCCGACATCAACGCTTATCGGAATGTCTCATCTCTCCCCGCCACTCTCTCCGCCACTCTCGCCTGTAAAACCTCAGTCGCTAAATGGATTTTCACCGATTTCGAGGTACAATCCAGATCCGTCCAAGTTAAATGGAGTAATAAGCTATAAAGATTCAATGACCGAGCTCATGAACTCAATTGAATCCATGAATATCGACGAATTGAACGCCACTTTAGCCGCCTCCGCCTCAAGACAGACGATTCCTTGGATCGACGTTTCGTCTCTCAACACTGAAGAACAACTCCAGTTTGTTCTCTCACCTTCCACTCCAAATGTCTCCGCCGCATCGGTGAACTTTTCCGTCAATAACAAAGGTAACGCCGACAATGGATGGGCCTCCGCCTCTGCCTCCGCCTCGGATCCGGATCTCGGATGGGTTAACGATCTTCTGATGTAA

Coding sequence (CDS)

ATGAGCAGTGTTTGTGCTGAGGAACAGAAATTTCAGTTTCAATTTCAACTGCCTTCTTCTTGTTCTTCGATTCTTGAGGACATTAACGGTGAAATGTGCTCTGATTCGCCGCGATTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTCAACGGCGAGGATGTAGCGGAAGAAGACGGCGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGTGGCGGTGTACTCGTAGTCGGAGCCATGACTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCGCGGCGACGAGATCCTCGTCGGTTTCATTACTCCGGCACGATGTGTCCGGATTTTCGACGCGGCGGTTGTGACCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTCGAGTGTTGGCTTCATCCAGCGAGATATCGGACCGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAAGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCGCCGATGAGTAATTTTCAAGGCGGCTCTTGTTCTTCGCCGAATAAGAGGAATTCTACTCTCAGATCGGCCGCCGCTGGTTCGAACCACGGCTGTTTATTTTGCCATTGCGGCGGAGCCGCCACTTCCTCGCCGACATCAACGCTTATCGGAATGTCTCATCTCTCCCCGCCACTCTCTCCGCCACTCTCGCCTGTAAAACCTCAGTCGCTAAATGGATTTTCACCGATTTCGAGGTACAATCCAGATCCGTCCAAGTTAAATGGAGTAATAAGCTATAAAGATTCAATGACCGAGCTCATGAACTCAATTGAATCCATGAATATCGACGAATTGAACGCCACTTTAGCCGCCTCCGCCTCAAGACAGACGATTCCTTGGATCGACGTTTCGTCTCTCAACACTGAAGAACAACTCCAGTTTGTTCTCTCACCTTCCACTCCAAATGTCTCCGCCGCATCGGTGAACTTTTCCGTCAATAACAAAGGTAACGCCGACAATGGATGGGCCTCCGCCTCTGCCTCCGCCTCGGATCCGGATCTCGGATGGGTTAACGATCTTCTGATGTAA

Protein sequence

MSSVCAEEQKFQFQFQLPSSCSSILEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPMSNFQGGSCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPLSPPLSPVKPQSLNGFSPISRYNPDPSKLNGVISYKDSMTELMNSIESMNIDELNATLAASASRQTIPWIDVSSLNTEEQLQFVLSPSTPNVSAASVNFSVNNKGNADNGWASASASASDPDLGWVNDLLM
Homology
[Close]
BLAST of CmaCh19G009950 vs. Swiss-Prot
Match: C3H2_ARATH (Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana GN=At1g03790 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.0e-77
Identity = 173/339 (51.03%), Postives = 216/339 (63.72%), Query Frame = 1 

Query: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120
           +  DPY+SDHFRM+EFK+ RCTRSRSHDWTDCPFAHPGEKARRRDPRRF YSG +CP+FR
Sbjct: 73  DSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFR 132

Query: 121 RGG-CDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPMSN 180
           RGG C RGD CEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP  N
Sbjct: 133 RGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPP-EN 192

Query: 181 FQGGSCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIG-MSHL--SPPLSPP 240
             G S S           + A  N  CLFC      +SSPTSTL+G +SHL  SP LSPP
Sbjct: 193 VSGVSAS----------PSPAAKNPCCLFC------SSSPTSTLLGNLSHLSRSPSLSPP 252

Query: 241 LSPV-KPQSLNGFSPISRYNPDPSKLNGVISYKDSMTELMNSIESMNIDELNATLAASAS 300
           +SP  K  + +     +      +   G ++YKD ++EL+NS++SM++ E  A  A+S+S
Sbjct: 253 MSPANKAAAFSRLRNRAASAVSAAAAAGSMNYKDVLSELVNSLDSMSLAE--ALQASSSS 312

Query: 301 RQTIPWIDVSS------------LNTEEQ-----LQFVLSPSTPN--VSAASVNFSVNN- 360
             T P    ++            L+ ++Q     LQF LSPSTP+   ++   NF  ++ 
Sbjct: 313 PVTTPVSAAAAAFASSCGLSNQRLHLQQQQPSSPLQFALSPSTPSYLTNSPQANFFSDDF 372

Query: 361 --KGNADNGWASASA----------SASDPDLGWVNDLL 363
             +    N + + +A          S  DPDLGWVNDLL
Sbjct: 373 TPRRRQMNDFTAMTAVRENTNIEDGSCGDPDLGWVNDLL 392

[Close]
BLAST of CmaCh19G009950 vs. Swiss-Prot
Match: C3H61_ARATH (Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana GN=At5g44260 PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 9.9e-72
Identity = 166/340 (48.82%), Postives = 207/340 (60.88%), Query Frame = 1 

Query: 64  DPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDF-RRG 123
           DPY+ DHFRMYEFK+ RCTRSRSHDWTDCPF+HPGEKARRRDPRRFHY+G +CP+F R G
Sbjct: 54  DPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHG 113

Query: 124 GCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPM--SNF 183
            C RGD C FAHGVFECWLHP+RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP   ++ 
Sbjct: 114 DCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHI 173

Query: 184 QGGSCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPLSPPLSPV 243
            GG   SP+   +++ S    +N  CLFC      + SPTSTL+ +S  SP  SPPLSP 
Sbjct: 174 SGGCGGSPSSSPASVLSNK--NNRCCLFC------SHSPTSTLLNLSR-SPSSSPPLSPA 233

Query: 244 KPQSLNGFSPISRYNPDPSKLNGVISYKD--SMTELM--NSIESMNIDELNATLAASAS- 303
                + FS +SR     + LN +IS  D  S+TE +  +S   + +    AT+ AS++ 
Sbjct: 234 --DKADAFSRLSRRR--TAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNL 293

Query: 304 ------RQTIPWIDVS----SLNTEEQLQFVLSPST-----------PNVSAASVNFSVN 363
                  +  PW+DV      L     L+F LSPS+           P  S     F+  
Sbjct: 294 SSNHHHHRLPPWLDVGDRDLQLQQSSPLRFALSPSSTPSYLHGQLQPPPSSFFGDEFTPR 353

[Close]
BLAST of CmaCh19G009950 vs. Swiss-Prot
Match: C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.8e-58
Identity = 152/357 (42.58%), Postives = 193/357 (54.06%), Query Frame = 1 

Query: 43  VESLLQKFLPFN----GEDVAEEDG------DPYSSDHFRMYEFKVWRCTRSRSHDWTDC 102
           V + L+ +LP N    G D  EE        D Y+ D FRMYEFKV RC R RSHDWT+C
Sbjct: 39  VIAALRDYLPANDVGVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTEC 98

Query: 103 PFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACK 162
           PFAHPGEKARRRDPR++HYSGT CPDFR+GGC RGD CE+AHGVFECWLHPARYRT+ CK
Sbjct: 99  PFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCK 158

Query: 163 DGKNCKRKVCFFAHSPRELRLLPPMSNFQGGSCSSP---NKRNSTLRSAAAGSNHGCLFC 222
           DG  C+R+VCFFAH+P +LR+LP   +      SSP   +   S LR  A  S       
Sbjct: 159 DGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFES------Y 218

Query: 223 HCGGAATSSPTSTLIGMSHLSPPLSPPLSP-----VKPQSLNGF-SPIS---------RY 282
                 +SSPTSTL+      P  SPPLSP     ++  S  G  SP++         R 
Sbjct: 219 LTKTIMSSSPTSTLMSPPKSPPSESPPLSPDGAAAIRRGSWPGVGSPVNDVLASFRQLRL 278

Query: 283 NPDPSKLNGVISYKDSMTELMNSIESMNIDELNATLAASASRQT--------IPWIDVSS 342
           N   S  +G  SY  S     +   +  +  L  T  AS +  T        +  +D+  
Sbjct: 279 NKVKSSPSGGWSYPSSSAVYGSPKAATGLYSLPTTPLASTATVTTASSFMPNLEPLDLGL 338

Query: 343 LNTEEQLQFVLSPSTPNVSAASVNFSVNNKGNADNGWASASASAS-DPDLGWVNDLL 363
           +  EE +Q V S            F   ++  A +G A+A A+A    D+ WV+DL+
Sbjct: 339 IGDEEPVQRVESGRALREKV----FERLSRDGAISGDATAFATAGVGLDVDWVSDLI 385

[Close]
BLAST of CmaCh19G009950 vs. Swiss-Prot
Match: C3H35_ORYSJ (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.0e-57
Identity = 118/212 (55.66%), Postives = 135/212 (63.68%), Query Frame = 1 

Query: 47  LQKFLPFNGEDVAEEDG---------DPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHP 106
           L+ +LP N    AE++          D Y+ D FRMYEFKV RC R RSHDWT+CPFAHP
Sbjct: 45  LRHYLPSNEAAAAEDEEEAAAVAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHP 104

Query: 107 GEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNC 166
           GEKARRRDPRR+ YSGT CPDFR+GGC RGD CEFAHGVFECWLHPARYRT+ CKDG  C
Sbjct: 105 GEKARRRDPRRYCYSGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTAC 164

Query: 167 KRKVCFFAHSPRELRLLPPMSNFQGGSCSSPNKRNSTLRSAA---AGSNHGCLFCH---- 226
           +R+VCFFAH+P +LR+LPP    Q GS S          +AA   A S  G         
Sbjct: 165 RRRVCFFAHTPDQLRVLPPSQ--QQGSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFE 224

Query: 227 ---CGGAATSSPTSTLIGMSHLSPPLSPPLSP 240
                   +SSPTSTL+      P  SPPLSP
Sbjct: 225 SYLTKSIMSSSPTSTLVSPPRSPPSESPPLSP 254

[Close]
BLAST of CmaCh19G009950 vs. Swiss-Prot
Match: C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-56
Identity = 94/136 (69.12%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 47  LQKFLPFNGEDVA--------EEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPG 106
           LQ++LP N  D          +   D YS DHFRMY+FKV RC R RSHDWT+CP+AHPG
Sbjct: 48  LQRYLPSNEPDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPG 107

Query: 107 EKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 166
           EKARRRDPR++HYSGT CPDFR+GGC +GD CEFAHGVFECWLHPARYRT+ CKDG NC 
Sbjct: 108 EKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCL 167

Query: 167 RKVCFFAHSPRELRLL 175
           RK+CFFAHSP +LR L
Sbjct: 168 RKICFFAHSPDQLRFL 183

[Close]
BLAST of CmaCh19G009950 vs. TrEMBL
Match: A0A0A0K2E3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G049250 PE=4 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 7.2e-162
Identity = 303/390 (77.69%), Postives = 321/390 (82.31%), Query Frame = 1 

Query: 2   SSVCAEEQ-------KFQFQFQLPSSCSSILEDING-------EMCSDSPRFSFAVESLL 61
           SSVCA+ Q        FQ      S  SS L  IN        EM SDSPRFS+AVESLL
Sbjct: 3   SSVCADHQHNKSPFSSFQSSSSSSSCSSSFLHHINLPPTKNHLEMSSDSPRFSYAVESLL 62

Query: 62  QKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPR 121
           QKFLPFNGED  EEDGDPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPGEKARRRDPR
Sbjct: 63  QKFLPFNGEDELEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR 122

Query: 122 RFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHS 181
           RFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHS
Sbjct: 123 RFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHS 182

Query: 182 PRELRLLPPMSNFQGGSCSSPNKR--NSTLR--SAAAGSNHGCLFCHCGGAA-TSSPTST 241
           PRELRLLPP+SNFQ GSCSSPN +  +S+LR  S A+ SNH CLFCHCGGAA TSSPTST
Sbjct: 183 PRELRLLPPVSNFQTGSCSSPNNKRSSSSLRSPSTASASNHCCLFCHCGGAAVTSSPTST 242

Query: 242 LIGMSHLSPPLSPPLSPVKPQSLNGFSPISRYNPDPSKLNGVISYKDSMTELMNSIESMN 301
           L GMSHLSPP SPP SP KP  +NGFSPISRYNPD SKLNGV+SYKD++TELM+SIESMN
Sbjct: 243 LFGMSHLSPPHSPPHSPGKP--INGFSPISRYNPDQSKLNGVLSYKDALTELMSSIESMN 302

Query: 302 IDELNATLAASAS-----RQTIPWIDVSSLNTEEQLQFVLSPSTPNVSAASVNFSVNNKG 361
           +D+ NATLAA+A+     RQTIPWIDVSSLN E+QLQFVLSPSTPNVS ASV FSV N  
Sbjct: 303 MDDANATLAAAAAAASGPRQTIPWIDVSSLNNEDQLQFVLSPSTPNVSTASVKFSVENNN 362

Query: 362 NADNGW----ASASASASDPDLGWVNDLLM 364
           N  NGW    ASAS SASDPDLGWVNDLLM
Sbjct: 363 N--NGWASAYASASTSASDPDLGWVNDLLM 388

[Close]
BLAST of CmaCh19G009950 vs. TrEMBL
Match: U5FMC6_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0017s04510g PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 8.0e-105
Identity = 221/397 (55.67%), Postives = 270/397 (68.01%), Query Frame = 1 

Query: 1   MSSVCAEEQKFQFQFQL--PSSCSSILEDINGEMCSDSPRFSFA----VESLLQKFLPFN 60
           MS++CAE+ K     QL  P      LE + G++ +             E+ LQ+FLP+N
Sbjct: 1   MSTICAEQHKPYTPHQLLSPKRPFRDLEILPGKLLTKKTHQETLDMSPYETNLQRFLPYN 60

Query: 61  ---GEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY 120
               E V + + DPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY
Sbjct: 61  DYSNEKVLDGELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY 120

Query: 121 SGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPREL 180
           SGT+CP+F+RGGC RG+ CEF+HGVFECWLHP+RYRTEACKDGKNCKRKVCFFAHSPR+L
Sbjct: 121 SGTVCPEFKRGGCSRGENCEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQL 180

Query: 181 RLLPPMSNFQGGSCSSPNKRNSTLRSAAAGSNHG--CLFCHCGGAATSSPTSTLIGMSHL 240
           R+LP +S+           RN +L S  +  NH   C+ CH   + TSSPTSTL+GMSH+
Sbjct: 181 RILPEVSS-----------RNKSLASPCSSLNHSHCCVVCH---SMTSSPTSTLLGMSHM 240

Query: 241 SPP----LSPPLSPVKPQSLNGFSPISRYNPDPSKLN-GVISYKDSMTELMNSIESMNID 300
           SPP    LSPPLSPVK QSL+GFSPISRYN   SK   GV+SYKD ++ELM+S+E+MN +
Sbjct: 241 SPPLSPSLSPPLSPVKHQSLSGFSPISRYNETLSKFRAGVVSYKDVLSELMSSLEAMNFN 300

Query: 301 E---LNATLAASAS-----RQTIPW-IDVSSLNTEEQLQFVLSPSTPNVSAASVN----- 360
           E   +++ ++ S +       T PW IDV S + E+Q QF+LSPSTP  S+   N     
Sbjct: 301 EGASVSSPMSLSTNHNRNVNSTTPWNIDV-SFSGEDQPQFILSPSTPTPSSKFFNGDCSS 360

Query: 361 ---FSVNNKGNADNGWASAS-ASASDPDLGWVNDLLM 364
                V++K N  N       A  SDPDLGWVN+LLM
Sbjct: 361 NKGLFVDDKINDHNNIGDGGLACTSDPDLGWVNELLM 382

[Close]
BLAST of CmaCh19G009950 vs. TrEMBL
Match: A0A059DH66_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01839 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.9e-102
Identity = 198/339 (58.41%), Postives = 244/339 (71.98%), Query Frame = 1 

Query: 44  ESLLQKFLPFN-GEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKAR 103
           E+ LQ+FLPFN G D  +ED DPYSSDHFRM+EFKV RCTRSRSHDWTDCPFAHPGEKAR
Sbjct: 36  ETPLQRFLPFNNGGDDEDEDSDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKAR 95

Query: 104 RRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVC 163
           RRDPR++HYSGT+C ++RRG C RGD CEFAHGVFECWLHP++YRTEACKDGKNCKRKVC
Sbjct: 96  RRDPRKYHYSGTVCAEYRRGSCSRGDNCEFAHGVFECWLHPSKYRTEACKDGKNCKRKVC 155

Query: 164 FFAHSPRELRLLPPMSNFQGGSCSSPNKRNSTLRSAAAGSN--HGCLFCHCGGAATSSPT 223
           FFAHS R+LRLLP  S  +  S    N   S   S  + S+  H CLFCH      SSPT
Sbjct: 156 FFAHSTRQLRLLPAQS--EPNSPQEINLEKSKFHSPVSPSSLPHCCLFCH--SFTASSPT 215

Query: 224 STLIGMSHLSPP------LSPPLSPVKPQSLNGFSPISRY--NPDPSKLNGVISYKDSMT 283
           STL+GMSHLSPP      LSPPLSP+K +SL+GFSPISRY    +PS L+  +SYKD + 
Sbjct: 216 STLLGMSHLSPPLSPSQSLSPPLSPLKGRSLSGFSPISRYADRLEPSCLSQGMSYKDVLN 275

Query: 284 ELMNSIESMNIDEL-----NATLAASASRQTIPWIDVSSLNTEEQLQFVLSPSTPNVSAA 343
           E+M S++ M + E+     ++ L++  +R  +PW+DV++   EEQ QF+LSPSTPN    
Sbjct: 276 EIMTSLDVMKMSEVSPPPHSSPLSSVKNRTAMPWVDVTTSVNEEQTQFILSPSTPNYPQV 335

Query: 344 SVNFSVNNKGNADNGWA---SASASASDPDLGWVNDLLM 364
             NF  ++  + +  +A   +   S  DPD+GWVN+LLM
Sbjct: 336 PKNFFGSDPSSNEGIFADKVNEGNSCDDPDIGWVNELLM 370

[Close]
BLAST of CmaCh19G009950 vs. TrEMBL
Match: A0A068V4M8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042287001 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.6e-100
Identity = 200/355 (56.34%), Postives = 246/355 (69.30%), Query Frame = 1 

Query: 29  NGEMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHD 88
           +G+M  DSP+   A E+LLQKFLP+N  D  ++D DPYSSDHFRMYEFKV +CTRSRSHD
Sbjct: 176 SGDMFMDSPK---AEEALLQKFLPYNNID--DDDADPYSSDHFRMYEFKVRKCTRSRSHD 235

Query: 89  WTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRT 148
           WTDCPFAHPGEKARRRDPRR+HYSGT+C +FRRG C RGD CE+AHGVFECWLHP+RYRT
Sbjct: 236 WTDCPFAHPGEKARRRDPRRYHYSGTVCSEFRRGNCSRGDNCEYAHGVFECWLHPSRYRT 295

Query: 149 EACKDGKNCKRKVCFFAHSPRELRLLPPMSNFQGGSCSSPNKRNSTLRSAAAGSNHGCLF 208
           EACKDGKNCKRKVCFFAHSPR+LR+LP  +N    + S  N      +      NH C++
Sbjct: 296 EACKDGKNCKRKVCFFAHSPRQLRVLP--ANCHETASSPVNSPVEKQQQHHRNVNHCCMY 355

Query: 209 CHCGGAATSSPTSTLIGMSHLSPPLSPPLS-PVKPQSLNGFSPISRYNPDPSKLN----- 268
           CH   +  +SPTSTL+GMSHLSPPLSPPLS P+ P     FSP+SRY    + +      
Sbjct: 356 CH---SVAASPTSTLMGMSHLSPPLSPPLSPPISPAKAAQFSPVSRYKDHFASVEPCGMA 415

Query: 269 -------GVISYKDSMTELMNSIESMNIDELNATLAASASRQTIPWIDVSSLNTEEQLQF 328
                  G +SYKD++ ELM+SIE+M ++E ++  AAS +  ++PWIDV + N ++Q QF
Sbjct: 416 QFGSGGMGGMSYKDALAELMSSIEAMRVNESSSRAAASNNGISLPWIDV-NFNGDDQQQF 475

Query: 329 VLSPSTPNVSAA--------SVNFSVNNKGNADNGWASASASASDPDLGWVNDLL 363
           +LSPSTP+   +        S NF   NK   +NG A        PDL WVNDLL
Sbjct: 476 ILSPSTPSPGTSKFLSRNFPSRNFIEENK-FTENGLAG-------PDLEWVNDLL 511

[Close]
BLAST of CmaCh19G009950 vs. TrEMBL
Match: M1D6B1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400032829 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.3e-98
Identity = 206/397 (51.89%), Postives = 261/397 (65.74%), Query Frame = 1 

Query: 19  SSCSSILEDINGEMCSDSPR----FSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMY 78
           S+ SSI   ++     DSP+         ++L QKFLP+N  D  ++D DPYSSDHFRMY
Sbjct: 39  STLSSIDHVVSDVQFMDSPKSVGGLGTESDTLFQKFLPYNSLD-DDDDADPYSSDHFRMY 98

Query: 79  EFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAH 138
           EFKV RCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGT+C +FR+G C RGD CEFAH
Sbjct: 99  EFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTVCSEFRKGNCSRGDNCEFAH 158

Query: 139 GVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPMSNFQGGSCSSPNKRNST 198
           GVFECWLHP RYRTEACKDGKNCKRK+CFFAH+ R+LR+LPP S ++ GS S  N  NS 
Sbjct: 159 GVFECWLHPTRYRTEACKDGKNCKRKICFFAHTSRQLRVLPP-SCYESGS-SPKNLNNSP 218

Query: 199 LRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPLSPPLS-PVKPQSLNGF-SPIS 258
           +       NH C+FCH   + ++SPTSTLIGMSH+SPP+SP LS P+ P + N F SP+S
Sbjct: 219 IEKKYRNMNHCCVFCH---SVSASPTSTLIGMSHISPPMSPSLSPPLSPANRNQFSSPMS 278

Query: 259 RYNP--------------DPSKLNGVISYKDSMTELMNSIESMNID-ELNATLAASASRQ 318
           RY                DPS   G++SYKD++TEL++S+E+MN++ E N++ A +A+  
Sbjct: 279 RYTDRFGSVESSSGMGQLDPS---GLMSYKDALTELVSSLEAMNVNHEPNSSAAVAAAHS 338

Query: 319 -------TIPWIDVSSLNT---EEQLQFVLSPSTPN---------------------VSA 363
                   +PW+DV+  N    ++Q QF+LSPSTP+                     VS+
Sbjct: 339 HSVNFDGNLPWLDVNFNNNNSYDDQQQFLLSPSTPSPSPISNSRTKFYTREFPSASPVSS 398

[Close]
BLAST of CmaCh19G009950 vs. TAIR10
Match: AT1G03790.1 (AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-78
Identity = 173/339 (51.03%), Postives = 216/339 (63.72%), Query Frame = 1 

Query: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120
           +  DPY+SDHFRM+EFK+ RCTRSRSHDWTDCPFAHPGEKARRRDPRRF YSG +CP+FR
Sbjct: 73  DSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFR 132

Query: 121 RGG-CDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPMSN 180
           RGG C RGD CEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP  N
Sbjct: 133 RGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPP-EN 192

Query: 181 FQGGSCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIG-MSHL--SPPLSPP 240
             G S S           + A  N  CLFC      +SSPTSTL+G +SHL  SP LSPP
Sbjct: 193 VSGVSAS----------PSPAAKNPCCLFC------SSSPTSTLLGNLSHLSRSPSLSPP 252

Query: 241 LSPV-KPQSLNGFSPISRYNPDPSKLNGVISYKDSMTELMNSIESMNIDELNATLAASAS 300
           +SP  K  + +     +      +   G ++YKD ++EL+NS++SM++ E  A  A+S+S
Sbjct: 253 MSPANKAAAFSRLRNRAASAVSAAAAAGSMNYKDVLSELVNSLDSMSLAE--ALQASSSS 312

Query: 301 RQTIPWIDVSS------------LNTEEQ-----LQFVLSPSTPN--VSAASVNFSVNN- 360
             T P    ++            L+ ++Q     LQF LSPSTP+   ++   NF  ++ 
Sbjct: 313 PVTTPVSAAAAAFASSCGLSNQRLHLQQQQPSSPLQFALSPSTPSYLTNSPQANFFSDDF 372

Query: 361 --KGNADNGWASASA----------SASDPDLGWVNDLL 363
             +    N + + +A          S  DPDLGWVNDLL
Sbjct: 373 TPRRRQMNDFTAMTAVRENTNIEDGSCGDPDLGWVNDLL 392

[Close]
BLAST of CmaCh19G009950 vs. TAIR10
Match: AT5G44260.1 (AT5G44260.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 271.9 bits (694), Expect = 5.6e-73
Identity = 166/340 (48.82%), Postives = 207/340 (60.88%), Query Frame = 1 

Query: 64  DPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDF-RRG 123
           DPY+ DHFRMYEFK+ RCTRSRSHDWTDCPF+HPGEKARRRDPRRFHY+G +CP+F R G
Sbjct: 54  DPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHG 113

Query: 124 GCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPM--SNF 183
            C RGD C FAHGVFECWLHP+RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP   ++ 
Sbjct: 114 DCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHI 173

Query: 184 QGGSCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPLSPPLSPV 243
            GG   SP+   +++ S    +N  CLFC      + SPTSTL+ +S  SP  SPPLSP 
Sbjct: 174 SGGCGGSPSSSPASVLSNK--NNRCCLFC------SHSPTSTLLNLSR-SPSSSPPLSPA 233

Query: 244 KPQSLNGFSPISRYNPDPSKLNGVISYKD--SMTELM--NSIESMNIDELNATLAASAS- 303
                + FS +SR     + LN +IS  D  S+TE +  +S   + +    AT+ AS++ 
Sbjct: 234 --DKADAFSRLSRRR--TAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNL 293

Query: 304 ------RQTIPWIDVS----SLNTEEQLQFVLSPST-----------PNVSAASVNFSVN 363
                  +  PW+DV      L     L+F LSPS+           P  S     F+  
Sbjct: 294 SSNHHHHRLPPWLDVGDRDLQLQQSSPLRFALSPSSTPSYLHGQLQPPPSSFFGDEFTPR 353

[Close]
BLAST of CmaCh19G009950 vs. TAIR10
Match: AT4G29190.1 (AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-57
Identity = 94/136 (69.12%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 47  LQKFLPFNGEDVA--------EEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPG 106
           LQ++LP N  D          +   D YS DHFRMY+FKV RC R RSHDWT+CP+AHPG
Sbjct: 48  LQRYLPSNEPDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPG 107

Query: 107 EKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 166
           EKARRRDPR++HYSGT CPDFR+GGC +GD CEFAHGVFECWLHPARYRT+ CKDG NC 
Sbjct: 108 EKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCL 167

Query: 167 RKVCFFAHSPRELRLL 175
           RK+CFFAHSP +LR L
Sbjct: 168 RKICFFAHSPDQLRFL 183

[Close]
BLAST of CmaCh19G009950 vs. TAIR10
Match: AT2G19810.1 (AT2G19810.1 CCCH-type zinc finger family protein)

HSP 1 Score: 219.5 bits (558), Expect = 3.3e-57
Identity = 108/196 (55.10%), Postives = 128/196 (65.31%), Query Frame = 1 

Query: 18  PSSCSSILEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDG--------DPYSSD 77
           P S    + DI G     S       E  LQ++LP N  D   +          D Y+ D
Sbjct: 20  PLSEDLTVSDIYGSPDGGSSMMEALAE--LQRYLPSNEPDPDSDPDLSGPDSPIDAYTCD 79

Query: 78  HFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDG 137
           HFRMYEFKV RC R RSHDWT+CP+AHPGEKARRRDPR+FHYSGT CP+FR+G C RGD 
Sbjct: 80  HFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDA 139

Query: 138 CEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPMSNFQGGSCS--S 197
           CEF+HGVFECWLHPARYRT+ CKDG NC+R+VCFFAHSP ++R+LP  S  +  S    S
Sbjct: 140 CEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLPNQSPDRVDSFDVLS 199

Query: 198 PNKRNSTLRSAAAGSN 204
           P  R +   S +  SN
Sbjct: 200 PTIRRAFQFSISPSSN 213

[Close]
BLAST of CmaCh19G009950 vs. TAIR10
Match: AT2G25900.1 (AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-55
Identity = 116/234 (49.57%), Postives = 141/234 (60.26%), Query Frame = 1 

Query: 17  LPSSCSSI-LEDINGEMCSDSPRF-SFAVESLLQKFLPFN---------GEDVAEEDGDP 76
           + S  SS+ L  +N    S SP   SFA    L ++LP N           D +    D 
Sbjct: 29  ISSPFSSVNLNSVNDYPHSPSPYLDSFAS---LFRYLPSNELTNDSDSSSGDESSPLTDS 88

Query: 77  YSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCD 136
           +SSD FR+YEFK+ RC R RSHDWT+CPFAHPGEKARRRDPR+FHYSGT CP+FR+G C 
Sbjct: 89  FSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCR 148

Query: 137 RGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPMSNFQGGSC 196
           RGD CEF+HGVFECWLHP+RYRT+ CKDG +C+R++CFFAH+  +LR+LP   +   G  
Sbjct: 149 RGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFF 208

Query: 197 SSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPLSPPLSP 240
           S                          G AT SPTS L+  S   P  SPPLSP
Sbjct: 209 S--------------------------GLAT-SPTSILVSPSFSPPSESPPLSP 232

[Close]
BLAST of CmaCh19G009950 vs. NCBI nr
Match: gi|449438127|ref|XP_004136841.1| (PREDICTED: zinc finger CCCH domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 578.2 bits (1489), Expect = 1.0e-161
Identity = 303/390 (77.69%), Postives = 321/390 (82.31%), Query Frame = 1 

Query: 2   SSVCAEEQ-------KFQFQFQLPSSCSSILEDING-------EMCSDSPRFSFAVESLL 61
           SSVCA+ Q        FQ      S  SS L  IN        EM SDSPRFS+AVESLL
Sbjct: 3   SSVCADHQHNKSPFSSFQSSSSSSSCSSSFLHHINLPPTKNHLEMSSDSPRFSYAVESLL 62

Query: 62  QKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPR 121
           QKFLPFNGED  EEDGDPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPGEKARRRDPR
Sbjct: 63  QKFLPFNGEDELEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR 122

Query: 122 RFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHS 181
           RFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHS
Sbjct: 123 RFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHS 182

Query: 182 PRELRLLPPMSNFQGGSCSSPNKR--NSTLR--SAAAGSNHGCLFCHCGGAA-TSSPTST 241
           PRELRLLPP+SNFQ GSCSSPN +  +S+LR  S A+ SNH CLFCHCGGAA TSSPTST
Sbjct: 183 PRELRLLPPVSNFQTGSCSSPNNKRSSSSLRSPSTASASNHCCLFCHCGGAAVTSSPTST 242

Query: 242 LIGMSHLSPPLSPPLSPVKPQSLNGFSPISRYNPDPSKLNGVISYKDSMTELMNSIESMN 301
           L GMSHLSPP SPP SP KP  +NGFSPISRYNPD SKLNGV+SYKD++TELM+SIESMN
Sbjct: 243 LFGMSHLSPPHSPPHSPGKP--INGFSPISRYNPDQSKLNGVLSYKDALTELMSSIESMN 302

Query: 302 IDELNATLAASAS-----RQTIPWIDVSSLNTEEQLQFVLSPSTPNVSAASVNFSVNNKG 361
           +D+ NATLAA+A+     RQTIPWIDVSSLN E+QLQFVLSPSTPNVS ASV FSV N  
Sbjct: 303 MDDANATLAAAAAAASGPRQTIPWIDVSSLNNEDQLQFVLSPSTPNVSTASVKFSVENNN 362

Query: 362 NADNGW----ASASASASDPDLGWVNDLLM 364
           N  NGW    ASAS SASDPDLGWVNDLLM
Sbjct: 363 N--NGWASAYASASTSASDPDLGWVNDLLM 388

[Close]
BLAST of CmaCh19G009950 vs. NCBI nr
Match: gi|659110543|ref|XP_008455280.1| (PREDICTED: zinc finger CCCH domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 570.1 bits (1468), Expect = 2.8e-159
Identity = 286/346 (82.66%), Postives = 306/346 (88.44%), Query Frame = 1 

Query: 32  MCSDSPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTD 91
           MCSDSPRFSFAVESLLQKFLPFNGED +EEDGDPYSSDHFRMYEFKV RCTRSRSHDWTD
Sbjct: 1   MCSDSPRFSFAVESLLQKFLPFNGEDKSEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTD 60

Query: 92  CPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEAC 151
           CPFAHPGEKARRRDPRRFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEAC
Sbjct: 61  CPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEAC 120

Query: 152 KDGKNCKRKVCFFAHSPRELRLLPPMSNFQGGSCSSPNKR--NSTLRSA--AAGSNHGCL 211
           KDGKNCKRKVCFFAHSPRELRLLPP+SN+Q GSCSSPN +  +S+LRSA  A+ SNH CL
Sbjct: 121 KDGKNCKRKVCFFAHSPRELRLLPPVSNYQSGSCSSPNNKRSSSSLRSASTASASNHCCL 180

Query: 212 FCHCGG-AATSSPTSTLIGMSHLSPPLSPPLSPVKPQSLNGFSPISRYNPDPSKLNGVIS 271
           FCHCGG AATSSPTSTL GMSHLSPP SPP SP KP  +NGFSPISRYNPD SKLNGV+S
Sbjct: 181 FCHCGGAAATSSPTSTLFGMSHLSPPHSPPHSPGKP--INGFSPISRYNPDQSKLNGVLS 240

Query: 272 YKDSMTELMNSIESMNIDELNATLAASAS---------RQTIPWIDVSSLNTEEQLQFVL 331
           YKD++TELM+SIESMN+D+ NATLAA+A+         RQTIPWIDVSSLN E+QLQFVL
Sbjct: 241 YKDALTELMSSIESMNMDDANATLAAAAAAATAAASGPRQTIPWIDVSSLNNEDQLQFVL 300

Query: 332 SPSTPNVSAASVNFSVNNKGNADNGWASASASASDPDLGWVNDLLM 364
           SPSTPNVS ASVNFSV+     +NGW    ASASDPDLGWVNDLLM
Sbjct: 301 SPSTPNVSTASVNFSVDQN---NNGW----ASASDPDLGWVNDLLM 337

[Close]
BLAST of CmaCh19G009950 vs. NCBI nr
Match: gi|1009174943|ref|XP_015868612.1| (PREDICTED: zinc finger CCCH domain-containing protein 2-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 411.0 bits (1055), Expect = 2.2e-111
Identity = 233/409 (56.97%), Postives = 270/409 (66.01%), Query Frame = 1 

Query: 2   SSVCAEEQKFQFQFQLPSSCSSILEDIN-----------------GEMCSDSPRFSFAVE 61
           SSVC++      Q    S  + +L DI+                  EM S+SPRFS A E
Sbjct: 3   SSVCSDHHHHHHQLFPSSKKTLLLRDIDIPPRKLLLTRRAHQDPAAEMYSNSPRFSSAEE 62

Query: 62  SLLQKFLPFNGEDVAEEDGD---PYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKA 121
           +LLQKFLPFN      +D D   PYSSDHFRMYEFK+ RCTRSRSHDWTDCPF HPGEKA
Sbjct: 63  TLLQKFLPFNNSSAENDDDDSDDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFVHPGEKA 122

Query: 122 RRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKV 181
           RRRDPRR HYSGT+CP++RRGGC RGD CEFAHGVFECWLHPARYRTEACKDGKNCKRKV
Sbjct: 123 RRRDPRRHHYSGTVCPEYRRGGCSRGDSCEFAHGVFECWLHPARYRTEACKDGKNCKRKV 182

Query: 182 CFFAHSPRELRLLPPMSNFQGGSCS-SP----NKRNSTL-----RSAAAGSNHGCLFCHC 241
           CFFAH+PR+LR+LPP  + Q  S   SP    NK  S L      +AAAGSNH C+FC C
Sbjct: 183 CFFAHTPRQLRVLPPSLHSQTSSPEISPVGYKNKYLSHLSPTAAAAAAAGSNHCCMFC-C 242

Query: 242 GGAATSSPTSTLIGMSHLSPPLSPPLSPVKPQSLNGFSPISRYNPDPSKLNG------VI 301
             + TSSPTSTL+GM HLSPPLSPPLSP       GFSP+SRY  D     G       +
Sbjct: 243 -HSVTSSPTSTLLGMCHLSPPLSPPLSPAAKH--GGFSPVSRYGLDRMHHGGGGGGGVNV 302

Query: 302 SYKDSMTELMNSIESMNIDELNATLAASASRQTIPWIDVSSLNTEEQLQFVLSPSTPNVS 361
           SYKD +T+LM S+E+MN  E +   +A+   Q +PWIDVS  N ++Q QF+LSPSTPN S
Sbjct: 303 SYKDVLTDLMCSLEAMNFSETSPVSSATNYHQNLPWIDVSFNNDDQQQQFILSPSTPNPS 362

Query: 362 ---------AASVNFSVNNKGNADNGWASA--SASASDPDLGWVNDLLM 364
                     +S N S NN  N D+   +   S S SDPDLGWVN+LLM
Sbjct: 363 GSGNFFGGDCSSSNKSFNN-NNIDHKQLNVNNSGSCSDPDLGWVNELLM 406

[Close]
BLAST of CmaCh19G009950 vs. NCBI nr
Match: gi|1000968413|ref|XP_015573898.1| (PREDICTED: zinc finger CCCH domain-containing protein 2 [Ricinus communis])

HSP 1 Score: 390.2 bits (1001), Expect = 4.0e-105
Identity = 226/402 (56.22%), Postives = 265/402 (65.92%), Query Frame = 1 

Query: 1   MSSVCAEEQKFQFQFQLPSSCSSILE-DINGEMCSDSPRF--------SFAVESLLQKFL 60
           MS+VCAE+ K      L S   S  + DI          F        S   ES L KFL
Sbjct: 1   MSTVCAEQHKLYPSHPLFSPNKSFKDLDIPPRKLLSKKTFQESSPDMLSSPFESHLHKFL 60

Query: 61  PFN------------GEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGE 120
           P N            G D  ++D DPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPGE
Sbjct: 61  PCNDLISSDNNHDQRGSD--DQDLDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGE 120

Query: 121 KARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKR 180
           KA RRDPR++HYSG +CP+FRRGGC RGD CEFAHGVFECWLHP+RYRTEACKDGKNCKR
Sbjct: 121 KALRRDPRKYHYSGAICPEFRRGGCSRGDSCEFAHGVFECWLHPSRYRTEACKDGKNCKR 180

Query: 181 KVCFFAHSPRELRLLPPMSNFQGGSCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSP 240
           KVCFFAHSPR+LR+LP +S      C + NK +    S        CL CH   +  SSP
Sbjct: 181 KVCFFAHSPRQLRILPEVS------CGAINKYDKHTHSC-------CLACH---SVISSP 240

Query: 241 TSTLIGMSHLSPP----LSPPLSPVKPQSLNGFSPISRYNPDPSKL-NGVISYKDSMTEL 300
           TSTL+GMSH+SPP    LSPPLSPVK +SL+GFSPI RYN   SKL +G++SYKD +TEL
Sbjct: 241 TSTLLGMSHVSPPLSPSLSPPLSPVKQRSLSGFSPIYRYNDRLSKLRSGIVSYKDVLTEL 300

Query: 301 MNSIESMNIDE-LNATLAASAS------RQTIPWIDVSSLNTE--EQLQFVLSPSTPNVS 360
           M+S+E+MN  E   AT   SAS        TIPWID++SLN E  +Q QF+LSPSTPN S
Sbjct: 301 MSSLEAMNFSEAAAATSPVSASTINRHINGTIPWIDIASLNGEDYQQQQFILSPSTPNGS 360

Query: 361 AASVNFSVNNKG----NADNGWASASASASDPDLGWVNDLLM 364
             S + S +NKG    + D    + +   +DPD+GWVN+LLM
Sbjct: 361 FFSGDCSSSNKGFINNDTDPDKINNNGGVADPDIGWVNELLM 384

[Close]
BLAST of CmaCh19G009950 vs. NCBI nr
Match: gi|566211356|ref|XP_006372730.1| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 388.7 bits (997), Expect = 1.2e-104
Identity = 221/397 (55.67%), Postives = 270/397 (68.01%), Query Frame = 1 

Query: 1   MSSVCAEEQKFQFQFQL--PSSCSSILEDINGEMCSDSPRFSFA----VESLLQKFLPFN 60
           MS++CAE+ K     QL  P      LE + G++ +             E+ LQ+FLP+N
Sbjct: 1   MSTICAEQHKPYTPHQLLSPKRPFRDLEILPGKLLTKKTHQETLDMSPYETNLQRFLPYN 60

Query: 61  ---GEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY 120
               E V + + DPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY
Sbjct: 61  DYSNEKVLDGELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY 120

Query: 121 SGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPREL 180
           SGT+CP+F+RGGC RG+ CEF+HGVFECWLHP+RYRTEACKDGKNCKRKVCFFAHSPR+L
Sbjct: 121 SGTVCPEFKRGGCSRGENCEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQL 180

Query: 181 RLLPPMSNFQGGSCSSPNKRNSTLRSAAAGSNHG--CLFCHCGGAATSSPTSTLIGMSHL 240
           R+LP +S+           RN +L S  +  NH   C+ CH   + TSSPTSTL+GMSH+
Sbjct: 181 RILPEVSS-----------RNKSLASPCSSLNHSHCCVVCH---SMTSSPTSTLLGMSHM 240

Query: 241 SPP----LSPPLSPVKPQSLNGFSPISRYNPDPSKLN-GVISYKDSMTELMNSIESMNID 300
           SPP    LSPPLSPVK QSL+GFSPISRYN   SK   GV+SYKD ++ELM+S+E+MN +
Sbjct: 241 SPPLSPSLSPPLSPVKHQSLSGFSPISRYNETLSKFRAGVVSYKDVLSELMSSLEAMNFN 300

Query: 301 E---LNATLAASAS-----RQTIPW-IDVSSLNTEEQLQFVLSPSTPNVSAASVN----- 360
           E   +++ ++ S +       T PW IDV S + E+Q QF+LSPSTP  S+   N     
Sbjct: 301 EGASVSSPMSLSTNHNRNVNSTTPWNIDV-SFSGEDQPQFILSPSTPTPSSKFFNGDCSS 360

Query: 361 ---FSVNNKGNADNGWASAS-ASASDPDLGWVNDLLM 364
                V++K N  N       A  SDPDLGWVN+LLM
Sbjct: 361 NKGLFVDDKINDHNNIGDGGLACTSDPDLGWVNELLM 382

The following BLAST results are available for this feature:
BLAST of CmaCh19G009950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H2_ARATH2.0e-7751.03Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana GN=At1g0379... [more]
C3H61_ARATH9.9e-7248.82Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana GN=At5g442... [more]
C3H2_ORYSJ2.8e-5842.58Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=... [more]
C3H35_ORYSJ4.0e-5755.66Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN... [more]
C3H49_ARATH2.6e-5669.12Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g291... [more]
BLAST of CmaCh19G009950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2E3_CUCSA7.2e-16277.69Uncharacterized protein OS=Cucumis sativus GN=Csa_7G049250 PE=4 SV=1[more]
U5FMC6_POPTR8.0e-10555.67Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0017s04510g PE=4 SV=1[more]
A0A059DH66_EUCGR4.9e-10258.41Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01839 PE=4 SV=1[more]
A0A068V4M8_COFCA1.6e-10056.34Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042287001 PE=4 SV=1[more]
M1D6B1_SOLTU4.3e-9851.89Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400032829 PE=4 SV=1[more]
BLAST of CmaCh19G009950 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03790.11.2e-7851.03 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G44260.15.6e-7348.82 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT4G29190.11.5e-5769.12 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G19810.13.3e-5755.10 CCCH-type zinc finger family protein[more]
AT2G25900.12.3e-5549.57 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of CmaCh19G009950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438127|ref|XP_004136841.1|1.0e-16177.69PREDICTED: zinc finger CCCH domain-containing protein 2 [Cucumis sativus][more]
gi|659110543|ref|XP_008455280.1|2.8e-15982.66PREDICTED: zinc finger CCCH domain-containing protein 2-like [Cucumis melo][more]
gi|1009174943|ref|XP_015868612.1|2.2e-11156.97PREDICTED: zinc finger CCCH domain-containing protein 2-like isoform X1 [Ziziphu... [more]
gi|1000968413|ref|XP_015573898.1|4.0e-10556.22PREDICTED: zinc finger CCCH domain-containing protein 2 [Ricinus communis][more]
gi|566211356|ref|XP_006372730.1|1.2e-10455.67zinc finger family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G009950.1CmaCh19G009950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 142..173
score: 1.3E-4coord: 114..137
score: 7.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 110..136
score: 0.031coord: 145..168
score:
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 145..169
score: 6.484coord: 111..137
score: 12
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 109..139
score: 5.1
NoneNo IPR availablePANTHERPTHR14493UNCHARACTERIZEDcoord: 44..314
score: 1.4E
NoneNo IPR availablePANTHERPTHR14493:SF53ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2-RELATEDcoord: 44..314
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G009950Cucsa.195640Cucumber (Gy14) v1cgycmaB0572
CmaCh19G009950Cla002235Watermelon (97103) v1cmawmB488
CmaCh19G009950Csa7G049250Cucumber (Chinese Long) v2cmacuB533
CmaCh19G009950MELO3C018709Melon (DHL92) v3.5.1cmameB456
CmaCh19G009950ClCG07G002530Watermelon (Charleston Gray)cmawcgB468
CmaCh19G009950CSPI07G04910Wild cucumber (PI 183967)cmacpiB539
CmaCh19G009950CmoCh19G010360Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G009950CmoCh11G019940Cucurbita moschata (Rifu)cmacmoB496
CmaCh19G009950Lsi11G017050Bottle gourd (USVL1VR-Ls)cmalsiB473
CmaCh19G009950Cp4.1LG15g08070Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G009950Cp4.1LG04g02750Cucurbita pepo (Zucchini)cmacpeB541
CmaCh19G009950MELO3C018709.2Melon (DHL92) v3.6.1cmamedB529
CmaCh19G009950CsaV3_7G005830Cucumber (Chinese Long) v3cmacucB0643
CmaCh19G009950Cla97C07G130860Watermelon (97103) v2cmawmbB541
CmaCh19G009950Bhi05G001686Wax gourdcmawgoB0657
CmaCh19G009950CsGy7G004460Cucumber (Gy14) v2cgybcmaB950
CmaCh19G009950Carg19245Silver-seed gourdcarcmaB1214
CmaCh19G009950Carg19154Silver-seed gourdcarcmaB1009
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh19G009950CmaCh11G019120Cucurbita maxima (Rimu)cmacmaB154
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G009950Cucumber (Gy14) v2cgybcmaB944
CmaCh19G009950Melon (DHL92) v3.6.1cmamedB534
CmaCh19G009950Melon (DHL92) v3.6.1cmamedB564
CmaCh19G009950Silver-seed gourdcarcmaB0574
CmaCh19G009950Silver-seed gourdcarcmaB1008
CmaCh19G009950Cucumber (Chinese Long) v3cmacucB0629
CmaCh19G009950Cucumber (Chinese Long) v3cmacucB0638
CmaCh19G009950Watermelon (97103) v2cmawmbB520
CmaCh19G009950Watermelon (97103) v2cmawmbB528
CmaCh19G009950Watermelon (97103) v2cmawmbB544
CmaCh19G009950Wax gourdcmawgoB0643
CmaCh19G009950Wax gourdcmawgoB0666
CmaCh19G009950Cucurbita maxima (Rimu)cmacmaB148
CmaCh19G009950Cucurbita maxima (Rimu)cmacmaB225
CmaCh19G009950Cucurbita maxima (Rimu)cmacmaB394
CmaCh19G009950Cucurbita maxima (Rimu)cmacmaB442
CmaCh19G009950Cucurbita maxima (Rimu)cmacmaB464
CmaCh19G009950Cucurbita moschata (Rifu)cmacmoB492
CmaCh19G009950Cucurbita moschata (Rifu)cmacmoB507
CmaCh19G009950Cucurbita moschata (Rifu)cmacmoB514
CmaCh19G009950Cucurbita moschata (Rifu)cmacmoB535
CmaCh19G009950Wild cucumber (PI 183967)cmacpiB533
CmaCh19G009950Cucumber (Chinese Long) v2cmacuB527
CmaCh19G009950Melon (DHL92) v3.5.1cmameB461
CmaCh19G009950Watermelon (Charleston Gray)cmawcgB458
CmaCh19G009950Watermelon (Charleston Gray)cmawcgB471
CmaCh19G009950Watermelon (97103) v1cmawmB493
CmaCh19G009950Watermelon (97103) v1cmawmB500
CmaCh19G009950Cucurbita pepo (Zucchini)cmacpeB527
CmaCh19G009950Cucurbita pepo (Zucchini)cmacpeB533
CmaCh19G009950Cucurbita pepo (Zucchini)cmacpeB537
CmaCh19G009950Bottle gourd (USVL1VR-Ls)cmalsiB477