Carg19245 (gene) Silver-seed gourd

Overview
NameCarg19245
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger CCCH domain-containing protein
LocationCucurbita_argyrosperma_scaffold_099 : 449534 .. 450625 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAGTGTTTGTGCTGAGGAGCAGAAATTTCAGTTTCAATTTCAACTGCCTTCTTCTTGTTCTTCGATTATTGAGGACATTAACGGTGAAATGTGCTCTGATTCGCCGCGATTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTTAACGGCGAGGATGTAGCGGAGGAAGACGGTGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGTGGCGGTGTACTCGTAGTCGGAGCCATGACTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCGCGGCGACGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGATTTTCGACGCGGCGGTTGTGACCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTCGAGTGTTGGCTTCATCCAGCGAGATATCGGACCGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTACCGCCGGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCGCCGAATAAGAGGAGTTCTACTCTCAGATCGGCCGCCGCTGGTTCGAACCACGGCTGTTTATTTTGCCATTGCGGCGGAGCCGCCACTTCCTCGCCGACATCGACGCTTATCGGAATGTCTCATCTCTCTCCGCCACTCTCTCCGCCACTCTCGCCTGTAAAACCTCAGTCGCTAAATGGATTTTCATCGATTTCAAGGTACAATCCAGATCCGTCTAAGTTAAATGGAGTAATAAGTTATAAAGATTCAATGGCCGAGCTCATGAACTCCATTGAATCCATGAATATCGACGAATTGAACGCCGCTTTAGCCGCCTCCGCCTCAAGACAAACGATTCCTTGGATCGATGTTTCGTCTCTCAACACTGAAGATCAACTCCAGTTTGTTCTCTCACCTTCCACTCCAAATGTCTCCGCCACATCGATGAACTTTTCCGTCAATAACAAAGGTAACGCCGACAATGGCTGGGCCTCCGCCTCCGCCTCCGCCTCCGATCCAGATCTCGGATGGGTTAACGATCTTCTGATGTAA

mRNA sequence

ATGAGCAGTGTTTGTGCTGAGGAGCAGAAATTTCAGTTTCAATTTCAACTGCCTTCTTCTTGTTCTTCGATTATTGAGGACATTAACGGTGAAATGTGCTCTGATTCGCCGCGATTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTTAACGGCGAGGATGTAGCGGAGGAAGACGGTGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGTGGCGGTGTACTCGTAGTCGGAGCCATGACTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCGCGGCGACGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGATTTTCGACGCGGCGGTTGTGACCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTCGAGTGTTGGCTTCATCCAGCGAGATATCGGACCGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTACCGCCGGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCGCCGAATAAGAGGAGTTCTACTCTCAGATCGGCCGCCGCTGGTTCGAACCACGGCTGTTTATTTTGCCATTGCGGCGGAGCCGCCACTTCCTCGCCGACATCGACGCTTATCGGAATGTCTCATCTCTCTCCGCCACTCTCTCCGCCACTCTCGCCTGTAAAACCTCAGTCGCTAAATGGATTTTCATCGATTTCAAGGTACAATCCAGATCCGTCTAAGTTAAATGGAGTAATAAGTTATAAAGATTCAATGGCCGAGCTCATGAACTCCATTGAATCCATGAATATCGACGAATTGAACGCCGCTTTAGCCGCCTCCGCCTCAAGACAAACGATTCCTTGGATCGATGTTTCGTCTCTCAACACTGAAGATCAACTCCAGTTTGTTCTCTCACCTTCCACTCCAAATGTCTCCGCCACATCGATGAACTTTTCCGTCAATAACAAAGGTAACGCCGACAATGGCTGGGCCTCCGCCTCCGCCTCCGCCTCCGATCCAGATCTCGGATGGGTTAACGATCTTCTGATGTAA

Coding sequence (CDS)

ATGAGCAGTGTTTGTGCTGAGGAGCAGAAATTTCAGTTTCAATTTCAACTGCCTTCTTCTTGTTCTTCGATTATTGAGGACATTAACGGTGAAATGTGCTCTGATTCGCCGCGATTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTTAACGGCGAGGATGTAGCGGAGGAAGACGGTGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGTGGCGGTGTACTCGTAGTCGGAGCCATGACTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCGCGGCGACGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGATTTTCGACGCGGCGGTTGTGACCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTCGAGTGTTGGCTTCATCCAGCGAGATATCGGACCGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTACCGCCGGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCGCCGAATAAGAGGAGTTCTACTCTCAGATCGGCCGCCGCTGGTTCGAACCACGGCTGTTTATTTTGCCATTGCGGCGGAGCCGCCACTTCCTCGCCGACATCGACGCTTATCGGAATGTCTCATCTCTCTCCGCCACTCTCTCCGCCACTCTCGCCTGTAAAACCTCAGTCGCTAAATGGATTTTCATCGATTTCAAGGTACAATCCAGATCCGTCTAAGTTAAATGGAGTAATAAGTTATAAAGATTCAATGGCCGAGCTCATGAACTCCATTGAATCCATGAATATCGACGAATTGAACGCCGCTTTAGCCGCCTCCGCCTCAAGACAAACGATTCCTTGGATCGATGTTTCGTCTCTCAACACTGAAGATCAACTCCAGTTTGTTCTCTCACCTTCCACTCCAAATGTCTCCGCCACATCGATGAACTTTTCCGTCAATAACAAAGGTAACGCCGACAATGGCTGGGCCTCCGCCTCCGCCTCCGCCTCCGATCCAGATCTCGGATGGGTTAACGATCTTCTGATGTAA

Protein sequence

MSSVCAEEQKFQFQFQLPSSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPLSPPLSPVKPQSLNGFSSISRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASASRQTIPWIDVSSLNTEDQLQFVLSPSTPNVSATSMNFSVNNKGNADNGWASASASASDPDLGWVNDLLM
Homology
[Close]
BLAST of Carg19245 vs. NCBI nr
Match: XP_023554528.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726.1 bits (1873), Expect = 5.9e-206
Identity = 356/363 (98.07%), Postives = 359/363 (98.90%), Query Frame = 0 

Query: 1   MSSVCAEEQKFQFQFQLPSSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE 60
           MSSVCAE+QKFQFQFQLPSSCS I+EDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE
Sbjct: 1   MSSVCAEQQKFQFQFQLPSSCSKILEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE 60

Query: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120
           EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR
Sbjct: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120

Query: 121 RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNF 180
           RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNF
Sbjct: 121 RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNF 180

Query: 181 QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV 240
           QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV
Sbjct: 181 QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV 240

Query: 241 KPQSLNGFSSISRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASASRQTIP 300
           KPQSLNGFS ISRYNPDPSKLNGVISYKDSM ELMNSIESMNIDELNAALAASASRQTIP
Sbjct: 241 KPQSLNGFSPISRYNPDPSKLNGVISYKDSMTELMNSIESMNIDELNAALAASASRQTIP 300

Query: 301 WIDVSSLNTEDQLQFVLSPSTPNVSATSMNFSVNNKGNADNGWASASASASDPDLGWVND 360
           WIDVSSLNTEDQLQFVLSPSTPNVSA S+NFSVNNKGNADNGWASASASASDPDLGWVND
Sbjct: 301 WIDVSSLNTEDQLQFVLSPSTPNVSAASVNFSVNNKGNADNGWASASASASDPDLGWVND 360

Query: 361 LLM 364
           LLM
Sbjct: 361 LLM 363

[Close]
BLAST of Carg19245 vs. NCBI nr
Match: XP_022969147.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 723.4 bits (1866), Expect = 3.8e-205
Identity = 354/363 (97.52%), Postives = 359/363 (98.90%), Query Frame = 0 

Query: 1   MSSVCAEEQKFQFQFQLPSSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE 60
           MSSVCAEEQKFQFQFQLPSSCSSI+EDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE
Sbjct: 1   MSSVCAEEQKFQFQFQLPSSCSSILEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE 60

Query: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120
           EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR
Sbjct: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120

Query: 121 RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNF 180
           RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPP+SNF
Sbjct: 121 RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPMSNF 180

Query: 181 QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV 240
           QGGSCSSPNKR+STLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV
Sbjct: 181 QGGSCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV 240

Query: 241 KPQSLNGFSSISRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASASRQTIP 300
           KPQSLNGFS ISRYNPDPSKLNGVISYKDSM ELMNSIESMNIDELNA LAASASRQTIP
Sbjct: 241 KPQSLNGFSPISRYNPDPSKLNGVISYKDSMTELMNSIESMNIDELNATLAASASRQTIP 300

Query: 301 WIDVSSLNTEDQLQFVLSPSTPNVSATSMNFSVNNKGNADNGWASASASASDPDLGWVND 360
           WIDVSSLNTE+QLQFVLSPSTPNVSA S+NFSVNNKGNADNGWASASASASDPDLGWVND
Sbjct: 301 WIDVSSLNTEEQLQFVLSPSTPNVSAASVNFSVNNKGNADNGWASASASASDPDLGWVND 360

Query: 361 LLM 364
           LLM
Sbjct: 361 LLM 363

[Close]
BLAST of Carg19245 vs. NCBI nr
Match: XP_022952114.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 708.4 bits (1827), Expect = 1.3e-200
Identity = 350/363 (96.42%), Postives = 351/363 (96.69%), Query Frame = 0 

Query: 1   MSSVCAEEQKFQFQFQLPSSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE 60
           MSSVCAEEQKFQFQFQLP SCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE
Sbjct: 1   MSSVCAEEQKFQFQFQLPPSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAE 60

Query: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120
           EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR
Sbjct: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120

Query: 121 RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNF 180
           RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNF
Sbjct: 121 RGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNF 180

Query: 181 QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV 240
           QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV
Sbjct: 181 QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXV 240

Query: 241 KPQSLNGFSSISRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASASRQTIP 300
           KPQSLNGFS  SRYNPDPSKLNGVISYKDSM ELMNSIESMNIDELNA LAASASRQ IP
Sbjct: 241 KPQSLNGFSPFSRYNPDPSKLNGVISYKDSMTELMNSIESMNIDELNATLAASASRQRIP 300

Query: 301 WIDVSSLNTEDQLQFVLSPSTPNVSATSMNFSVNNKGNADNGWASASASASDPDLGWVND 360
           WIDVSSLNTEDQLQFVLSPSTPN SA S+NFSVNNKGNADNGW    ASASDPDLGWVND
Sbjct: 301 WIDVSSLNTEDQLQFVLSPSTPNGSAASVNFSVNNKGNADNGW----ASASDPDLGWVND 359

Query: 361 LLM 364
           LLM
Sbjct: 361 LLM 359

[Close]
BLAST of Carg19245 vs. NCBI nr
Match: XP_023531320.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.2 bits (1515), Expect = 1.9e-164
Identity = 299/389 (76.86%), Postives = 314/389 (80.72%), Query Frame = 0 

Query: 1   MSSVCAEEQKFQFQFQLPSSCSSII----------------------EDINGEMCSDSPR 60
           MSSVCAE QK+QF FQ P S S  +                       D N EMC+DSPR
Sbjct: 1   MSSVCAENQKYQFHFQFPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPR 60

Query: 61  FSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPG 120
           FSFAVESLLQKFLPFNGED AEEDGDPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPG
Sbjct: 61  FSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 120

Query: 121 EKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180
           EKARRRDPRRFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEACKDGKNCK
Sbjct: 121 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180

Query: 181 RKVCFFAHSPRELRLLPPVSNFQ-GGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATS 240
           RKVCFFAHSPRELRLLPPVSNFQ GGSCSSPNK+SS LRS AAGSNH CLFCHCGGAATS
Sbjct: 181 RKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRS-AAGSNHCCLFCHCGGAATS 240

Query: 241 SPTSTLIGMSHLSPPXXXXXXXVKPQSLNGFSSISRY-NPDPSKLNGVISYKDSMAELMN 300
           SPTSTL GMSHLSPP         P+S+NGFS ISRY NPD SKL GV+SYKD++ ELM+
Sbjct: 241 SPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMS 300

Query: 301 SIESMNIDELNAALAAS--ASRQTIPWIDVSSLNTEDQLQFVLSPSTPNVSATSMNFSVN 360
           SIESMNID+ NA LAA+  A R T PWIDVSSLN EDQLQF+LSPSTPN SA S N S  
Sbjct: 301 SIESMNIDDANATLAAAIPAPRPT-PWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCE 360

Query: 361 NKGNADNGWASASASASDPDLGWVNDLLM 364
           +K NADNGWAS S     PDLGWVNDLLM
Sbjct: 361 HKSNADNGWASTSG----PDLGWVNDLLM 383

[Close]
BLAST of Carg19245 vs. NCBI nr
Match: XP_022989282.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 583.2 bits (1502), Expect = 6.2e-163
Identity = 299/392 (76.28%), Postives = 316/392 (80.61%), Query Frame = 0 

Query: 1   MSSVCAEEQKFQFQFQLP-----------SSCSSIIEDI--------------NGEMCSD 60
           MSSVCAE QK+QF FQ P           S     ++DI              N EMCSD
Sbjct: 1   MSSVCAENQKYQFHFQFPXXXXXXXDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCSD 60

Query: 61  SPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFA 120
           SPRFSFAVESLLQKFLPFNGED AEEDGDPYSSDHFRMYEFKV RCTRSRSHDWTDCPFA
Sbjct: 61  SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 120

Query: 121 HPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGK 180
           HPGEKARRRDPRRFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEACKDGK
Sbjct: 121 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 180

Query: 181 NCKRKVCFFAHSPRELRLLPPVSNFQ-GGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGA 240
           NCKRKVCFFAHSPRELRLLPPVSNFQ GGSCSSPNK+SS LRS AAGSNH CLFCHCGGA
Sbjct: 181 NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRS-AAGSNHCCLFCHCGGA 240

Query: 241 ATSSPTSTLIGMSHLSPPXXXXXXXVKPQSLNGFSSISRY-NPDPSKLNGVISYKDSMAE 300
           ATSSPTSTL GMSHLSPP         P+S+NGFS ISRY NPD SKL GV+SYKD++ E
Sbjct: 241 ATSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTE 300

Query: 301 LMNSIESMNIDELNAALAAS--ASRQTIPWIDVSSLNTEDQLQFVLSPSTPNVSATSMNF 360
           LM+SIESMNID+ NA LAA+  A R T PWIDVSSLN ED+LQF+LSPSTPN+SA S N 
Sbjct: 301 LMSSIESMNIDDANATLAAAIPAPRPT-PWIDVSSLNPEDELQFILSPSTPNISAASANL 360

Query: 361 SVNNKGNADNGWASASASASDPDLGWVNDLLM 364
           S  +K NADNGWAS S     PDLGWVNDLLM
Sbjct: 361 SCEHKTNADNGWASTSG----PDLGWVNDLLM 386

[Close]
BLAST of Carg19245 vs. TAIR10
Match: AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 278.1 bits (710), Expect = 7.7e-75
Identity = 168/346 (48.55%), Postives = 200/346 (57.80%), Query Frame = 0 

Query: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120
           +  DPY+SDHFRM+EFK+ RCTRSRSHDWTDCPFAHPGEKARRRDPRRF YSG +CP+FR
Sbjct: 73  DSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFR 132

Query: 121 RGG-CDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSN 180
           RGG C RGD CEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP  N
Sbjct: 133 RGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPP-EN 192

Query: 181 FQGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIG-MSHLSPPXXXXXX 240
             G S S           + A  N  CLFC      +SSPTSTL+G +SHLS        
Sbjct: 193 VSGVSAS----------PSPAAKNPCCLFC------SSSPTSTLLGNLSHLSRSPSLSPP 252

Query: 241 XVKPQSLNGFSSI---SRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASAS 300
                    FS +   +          G ++YKD ++EL+NS++SM++ E   AL AS+S
Sbjct: 253 MSPANKAAAFSRLRNRAASXXXXXXXXGSMNYKDVLSELVNSLDSMSLAE---ALQASSS 312

Query: 301 RQTIPWID------VSSLNTEDQ------------LQFVLSPSTPN--VSATSMNF---- 360
                          SS    +Q            LQF LSPSTP+   ++   NF    
Sbjct: 313 XXXXXXXXXXXXXFASSCGLSNQRLHLQQQQPSSPLQFALSPSTPSYLTNSPQANFFSDD 372

Query: 361 ---------------SVNNKGNADNGWASASASASDPDLGWVNDLL 363
                          +V    N ++G      S  DPDLGWVNDLL
Sbjct: 373 FTPRRRQMNDFTAMTAVRENTNIEDG------SCGDPDLGWVNDLL 392

[Close]
BLAST of Carg19245 vs. TAIR10
Match: AT5G44260.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 258.1 bits (658), Expect = 8.3e-69
Identity = 158/353 (44.76%), Postives = 200/353 (56.66%), Query Frame = 0 

Query: 64  DPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDF-RRG 123
           DPY+ DHFRMYEFK+ RCTRSRSHDWTDCPF+HPGEKARRRDPRRFHY+G +CP+F R G
Sbjct: 54  DPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHG 113

Query: 124 GCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLP--PVSNF 183
            C RGD C FAHGVFECWLHP+RYRTEACKDGK+CKRKVCFFAHSPR+LR+LP  P ++ 
Sbjct: 114 DCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHI 173

Query: 184 QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSH---LSPPXXXXX 243
            GG   SP+   +++ S    +N  CLFC      + SPTSTL+ +S     SPP     
Sbjct: 174 SGGCGGSPSSSPASVLSNK--NNRCCLFC------SHSPTSTLLNLSRSPSSSPPLS--- 233

Query: 244 XXVKPQSLNGFSSISRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASASRQ 303
                   + FS +SR      +   V++      EL++S++S+++ E  AA ++S    
Sbjct: 234 ---PADKADAFSRLSR------RRTAVLN------ELISSLDSLSLTEALAASSSSPVTM 293

Query: 304 TI---------------------PWIDVS----SLNTEDQLQFVLSPST----------- 363
            I                     PW+DV      L     L+F LSPS+           
Sbjct: 294 PISTXXXXXXXXXXXXXXXXXLPPWLDVGDRDLQLQQSSPLRFALSPSSTPSYLHGQLQP 353

[Close]
BLAST of Carg19245 vs. TAIR10
Match: AT2G19810.1 (CCCH-type zinc finger family protein)

HSP 1 Score: 221.9 bits (564), Expect = 6.6e-58
Identity = 100/166 (60.24%), Postives = 117/166 (70.48%), Query Frame = 0 

Query: 18  PSSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDG--------DPYSSD 77
           P S    + DI G     S       E  LQ++LP N  D   +          D Y+ D
Sbjct: 20  PLSEDLTVSDIYGSPDGGSSMMEALAE--LQRYLPSNEPDPDSDPDLSGPDSPIDAYTCD 79

Query: 78  HFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDG 137
           HFRMYEFKV RC R RSHDWT+CP+AHPGEKARRRDPR+FHYSGT CP+FR+G C RGD 
Sbjct: 80  HFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDA 139

Query: 138 CEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLP 176
           CEF+HGVFECWLHPARYRT+ CKDG NC+R+VCFFAHSP ++R+LP
Sbjct: 140 CEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLP 183

[Close]
BLAST of Carg19245 vs. TAIR10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-57
Identity = 94/136 (69.12%), Postives = 107/136 (78.68%), Query Frame = 0 

Query: 47  LQKFLPFNGEDV--------AEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPG 106
           LQ++LP N  D          +   D YS DHFRMY+FKV RC R RSHDWT+CP+AHPG
Sbjct: 48  LQRYLPSNEPDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPG 107

Query: 107 EKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 166
           EKARRRDPR++HYSGT CPDFR+GGC +GD CEFAHGVFECWLHPARYRT+ CKDG NC 
Sbjct: 108 EKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCL 167

Query: 167 RKVCFFAHSPRELRLL 175
           RK+CFFAHSP +LR L
Sbjct: 168 RKICFFAHSPDQLRFL 183

[Close]
BLAST of Carg19245 vs. TAIR10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-54
Identity = 87/129 (67.44%), Postives = 105/129 (81.40%), Query Frame = 0 

Query: 64  DPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGG 123
           D +SSD FR+YEFK+ RC R RSHDWT+CPFAHPGEKARRRDPR+FHYSGT CP+FR+G 
Sbjct: 84  DSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGS 143

Query: 124 CDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLP----PVSN 183
           C RGD CEF+HGVFECWLHP+RYRT+ CKDG +C+R++CFFAH+  +LR+LP    P   
Sbjct: 144 CRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLG 203

Query: 184 FQGGSCSSP 189
           F  G  +SP
Sbjct: 204 FFSGLATSP 212

[Close]
BLAST of Carg19245 vs. Swiss-Prot
Match: sp|Q9ZWA1|C3H2_ARATH (Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g03790 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.4e-73
Identity = 168/346 (48.55%), Postives = 200/346 (57.80%), Query Frame = 0 

Query: 61  EDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFR 120
           +  DPY+SDHFRM+EFK+ RCTRSRSHDWTDCPFAHPGEKARRRDPRRF YSG +CP+FR
Sbjct: 73  DSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFR 132

Query: 121 RGG-CDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSN 180
           RGG C RGD CEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP  N
Sbjct: 133 RGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPP-EN 192

Query: 181 FQGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIG-MSHLSPPXXXXXX 240
             G S S           + A  N  CLFC      +SSPTSTL+G +SHLS        
Sbjct: 193 VSGVSAS----------PSPAAKNPCCLFC------SSSPTSTLLGNLSHLSRSPSLSPP 252

Query: 241 XVKPQSLNGFSSI---SRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASAS 300
                    FS +   +          G ++YKD ++EL+NS++SM++ E   AL AS+S
Sbjct: 253 MSPANKAAAFSRLRNRAASXXXXXXXXGSMNYKDVLSELVNSLDSMSLAE---ALQASSS 312

Query: 301 RQTIPWID------VSSLNTEDQ------------LQFVLSPSTPN--VSATSMNF---- 360
                          SS    +Q            LQF LSPSTP+   ++   NF    
Sbjct: 313 XXXXXXXXXXXXXFASSCGLSNQRLHLQQQQPSSPLQFALSPSTPSYLTNSPQANFFSDD 372

Query: 361 ---------------SVNNKGNADNGWASASASASDPDLGWVNDLL 363
                          +V    N ++G      S  DPDLGWVNDLL
Sbjct: 373 FTPRRRQMNDFTAMTAVRENTNIEDG------SCGDPDLGWVNDLL 392

[Close]
BLAST of Carg19245 vs. Swiss-Prot
Match: sp|Q9FKW2|C3H61_ARATH (Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=At5g44260 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-67
Identity = 158/353 (44.76%), Postives = 200/353 (56.66%), Query Frame = 0 

Query: 64  DPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDF-RRG 123
           DPY+ DHFRMYEFK+ RCTRSRSHDWTDCPF+HPGEKARRRDPRRFHY+G +CP+F R G
Sbjct: 54  DPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHG 113

Query: 124 GCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLP--PVSNF 183
            C RGD C FAHGVFECWLHP+RYRTEACKDGK+CKRKVCFFAHSPR+LR+LP  P ++ 
Sbjct: 114 DCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHI 173

Query: 184 QGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIGMSH---LSPPXXXXX 243
            GG   SP+   +++ S    +N  CLFC      + SPTSTL+ +S     SPP     
Sbjct: 174 SGGCGGSPSSSPASVLSNK--NNRCCLFC------SHSPTSTLLNLSRSPSSSPPLS--- 233

Query: 244 XXVKPQSLNGFSSISRYNPDPSKLNGVISYKDSMAELMNSIESMNIDELNAALAASASRQ 303
                   + FS +SR      +   V++      EL++S++S+++ E  AA ++S    
Sbjct: 234 ---PADKADAFSRLSR------RRTAVLN------ELISSLDSLSLTEALAASSSSPVTM 293

Query: 304 TI---------------------PWIDVS----SLNTEDQLQFVLSPST----------- 363
            I                     PW+DV      L     L+F LSPS+           
Sbjct: 294 PISTXXXXXXXXXXXXXXXXXLPPWLDVGDRDLQLQQSSPLRFALSPSSTPSYLHGQLQP 353

[Close]
BLAST of Carg19245 vs. Swiss-Prot
Match: sp|O82199|C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-56
Identity = 100/166 (60.24%), Postives = 117/166 (70.48%), Query Frame = 0 

Query: 18  PSSCSSIIEDINGEMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDG--------DPYSSD 77
           P S    + DI G     S       E  LQ++LP N  D   +          D Y+ D
Sbjct: 20  PLSEDLTVSDIYGSPDGGSSMMEALAE--LQRYLPSNEPDPDSDPDLSGPDSPIDAYTCD 79

Query: 78  HFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDG 137
           HFRMYEFKV RC R RSHDWT+CP+AHPGEKARRRDPR+FHYSGT CP+FR+G C RGD 
Sbjct: 80  HFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDA 139

Query: 138 CEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLP 176
           CEF+HGVFECWLHPARYRT+ CKDG NC+R+VCFFAHSP ++R+LP
Sbjct: 140 CEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLP 183

[Close]
BLAST of Carg19245 vs. Swiss-Prot
Match: sp|Q9M0G2|C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-56
Identity = 94/136 (69.12%), Postives = 107/136 (78.68%), Query Frame = 0 

Query: 47  LQKFLPFNGEDV--------AEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPG 106
           LQ++LP N  D          +   D YS DHFRMY+FKV RC R RSHDWT+CP+AHPG
Sbjct: 48  LQRYLPSNEPDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPG 107

Query: 107 EKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 166
           EKARRRDPR++HYSGT CPDFR+GGC +GD CEFAHGVFECWLHPARYRT+ CKDG NC 
Sbjct: 108 EKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCL 167

Query: 167 RKVCFFAHSPRELRLL 175
           RK+CFFAHSP +LR L
Sbjct: 168 RKICFFAHSPDQLRFL 183

[Close]
BLAST of Carg19245 vs. Swiss-Prot
Match: sp|Q9FU27|C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 7.7e-56
Identity = 98/156 (62.82%), Postives = 116/156 (74.36%), Query Frame = 0 

Query: 43  VESLLQKFLPFNGEDV-AEEDG---------DPYSSDHFRMYEFKVWRCTRSRSHDWTDC 102
           V + L+ +LP N   V A+E+          D Y+ D FRMYEFKV RC R RSHDWT+C
Sbjct: 39  VIAALRDYLPANDVGVGADEEXXXXAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTEC 98

Query: 103 PFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACK 162
           PFAHPGEKARRRDPR++HYSGT CPDFR+GGC RGD CE+AHGVFECWLHPARYRT+ CK
Sbjct: 99  PFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCK 158

Query: 163 DGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSP 189
           DG  C+R+VCFFAH+P +LR+LP   +      SSP
Sbjct: 159 DGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSP 194

[Close]
BLAST of Carg19245 vs. TrEMBL
Match: tr|A0A0A0K2E3|A0A0A0K2E3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049250 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.3e-148
Identity = 277/345 (80.29%), Postives = 292/345 (84.64%), Query Frame = 0 

Query: 31  EMCSDSPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWT 90
           EM SDSPRFS+AVESLLQKFLPFNGED  EEDGDPYSSDHFRMYEFKV RCTRSRSHDWT
Sbjct: 46  EMSSDSPRFSYAVESLLQKFLPFNGEDELEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWT 105

Query: 91  DCPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEA 150
           DCPFAHPGEKARRRDPRRFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEA
Sbjct: 106 DCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEA 165

Query: 151 CKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSPNKR--SSTLR--SAAAGSNHGC 210
           CKDGKNCKRKVCFFAHSPRELRLLPPVSNFQ GSCSSPN +  SS+LR  S A+ SNH C
Sbjct: 166 CKDGKNCKRKVCFFAHSPRELRLLPPVSNFQTGSCSSPNNKRSSSSLRSPSTASASNHCC 225

Query: 211 LFCHCGGAA-TSSPTSTLIGMSHLSPPXXXXXXXVKPQSLNGFSSISRYNPDPSKLNGVI 270
           LFCHCGGAA TSSPTSTL GMSHLSPP XXXXXX KP  +NGFS ISRYNPD SKLNGV+
Sbjct: 226 LFCHCGGAAVTSSPTSTLFGMSHLSPPHXXXXXXGKP--INGFSPISRYNPDQSKLNGVL 285

Query: 271 SYKDSMAELMNSIESMNIDELNAALAASAS-----RQTIPWIDVSSLNTEDQLQFVLSPS 330
           SYKD++ ELM+SIESMN+D+ NA LAA+A+     RQTIPWIDVSSLN EDQLQFVLSPS
Sbjct: 286 SYKDALTELMSSIESMNMDDANATLAAAAAAASGPRQTIPWIDVSSLNNEDQLQFVLSPS 345

Query: 331 TPNVSATSMNFSVNN--KGNADNGWASASASASDPDLGWVNDLLM 364
           TPNVS  S+ FSV N                  DPDLGWVNDLLM
Sbjct: 346 TPNVSTASVKFSVENXXXXXXXXXXXXXXXXXXDPDLGWVNDLLM 388

[Close]
BLAST of Carg19245 vs. TrEMBL
Match: tr|A0A1S3C0P5|A0A1S3C0P5_CUCME (zinc finger CCCH domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103495483 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.3e-134
Identity = 255/346 (73.70%), Postives = 268/346 (77.46%), Query Frame = 0 

Query: 32  MCSDSPRFSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTD 91
           MCSDSPRFSFAVESLLQKFLPFNGED +EEDGDPYSSDHFRMYEFKV RCTRSRSHDWTD
Sbjct: 1   MCSDSPRFSFAVESLLQKFLPFNGEDKSEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTD 60

Query: 92  CPFAHPGEKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEAC 151
           CPFAHPGEKARRRDPRRFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEAC
Sbjct: 61  CPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEAC 120

Query: 152 KDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCS-----SPNKRSSTLRSAAAGSNHGC 211
           KDGKNCKRKVCFFAHSPRELRLLPPVSN+Q GSCS                         
Sbjct: 121 KDGKNCKRKVCFFAHSPRELRLLPPVSNYQSGSCSXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 212 LFCHCGGAATSSPTSTLIGMSHLSPPXXXXXXXVKPQSLNGFSSISRYNPDPSKLNGVIS 271
                       PTSTL GMSHLSPP XXXXXX KP  +NGFS ISRYNPD SKLNGV+S
Sbjct: 181 XXXXXXXXXXXXPTSTLFGMSHLSPPHXXXXXXGKP--INGFSPISRYNPDQSKLNGVLS 240

Query: 272 YKDSMAELMNSIESMNIDELNA---------ALAASASRQTIPWIDVSSLNTEDQLQFVL 331
           YKD++ ELM+SIESMN+D+ NA                RQTIPWIDVSSLN EDQLQFVL
Sbjct: 241 YKDALTELMSSIESMNMDDANAXXXXXXXXXXXXXXGPRQTIPWIDVSSLNNEDQLQFVL 300

Query: 332 SPSTPNVSATSMNFSVNNKGNADNGWASASASASDPDLGWVNDLLM 364
           SPSTPNVS  S+NFSV+     +NGW    ASASDPDLGWVNDLLM
Sbjct: 301 SPSTPNVSTASVNFSVDQN---NNGW----ASASDPDLGWVNDLLM 337

[Close]
BLAST of Carg19245 vs. TrEMBL
Match: tr|A0A2I4E633|A0A2I4E633_9ROSI (zinc finger CCCH domain-containing protein 2-like OS=Juglans regia OX=51240 GN=LOC108986638 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.0e-110
Identity = 236/410 (57.56%), Postives = 273/410 (66.59%), Query Frame = 0 

Query: 2   SSVCAEEQKFQFQFQLPSSCSS---------------IIEDINGEM-CSDSPRFSFAVE- 61
           SSVCAE+ K     QL SS                  +I     EM  SDSPRFS +++ 
Sbjct: 3   SSVCAEQHKLHTSHQLLSSKKQLKNIDIPPRKLLGRRLIPTQEAEMYFSDSPRFSSSLDE 62

Query: 62  -SLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARR 121
            +LL+KFLP+NG D   +D DPYSSDHFRM+EFKV RCTRSRSHDWTDCPFAHPGEKARR
Sbjct: 63  STLLRKFLPYNGGDDDSDDSDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARR 122

Query: 122 RDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCF 181
           RDPRRFHYSG +CP++RRGGC RGD CEFAHGVFECWLHPARYRTEACKDGKNCKRKVCF
Sbjct: 123 RDPRRFHYSGQVCPEYRRGGCSRGDSCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCF 182

Query: 182 FAHSPRELRLLPPVSNFQGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTL 241
           FAH+PR+LR+LP   N Q  S +    +   L+S++  SNH CLFCHC   ATSSPTSTL
Sbjct: 183 FAHTPRQLRILP--LNSQNSSPTELPCKKKFLKSSS--SNHCCLFCHC---ATSSPTSTL 242

Query: 242 IGMSHLSPPXXXXXXXVKPQSLNGFSSISRYNP-----------DPSKLN-GVISYKDSM 301
           +GMSHLSPPXXXXXXXVK +S+NG S ISRY                +LN GV SYKD +
Sbjct: 243 LGMSHLSPPXXXXXXXVKQRSINGLSPISRYTDRFVSSELSGTGGMHQLNPGVPSYKDVL 302

Query: 302 AELMNSIESMNIDELNAALAASASRQTIPWIDVSSLNTEDQLQFVLSPSTPNVSATSMNF 361
            ELM+S E+MN  E   A   S+    +PW+DV S N+EDQ QF+LSPSTP+   +   F
Sbjct: 303 TELMSSFEAMNFSE--EASPLSSKSPNVPWVDV-SFNSEDQPQFILSPSTPSPYGSENFF 362

Query: 362 SVN------------------NKGNADNGWASASASASDPDLGWVNDLLM 364
           S N                  NK N +N W     S SDPDLGWVN+LLM
Sbjct: 363 SGNCSSKSFVDDXXXXXXXXXNKVNVENPW-----SCSDPDLGWVNELLM 397

[Close]
BLAST of Carg19245 vs. TrEMBL
Match: tr|A0A2N9G7S1|A0A2N9G7S1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26589 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.9e-100
Identity = 219/400 (54.75%), Postives = 260/400 (65.00%), Query Frame = 0 

Query: 1   MSSVCAEEQKFQF----QFQLPSSCSSIIEDINGEMCS-----DSPRFSFAVESLLQKFL 60
           MSSVCA++Q+ +     Q   P    + I+    ++ S       P   F+ E+L QKFL
Sbjct: 1   MSSVCADQQQHKLHPSHQLFSPKKLLNNIDIPPRKLLSTRRLLQEPDMYFSDEALFQKFL 60

Query: 61  PFNG------EDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRD 120
           P+N                PYSSDHFR+YEFKV RCTRSRSHDWTDCPFAHPGEKARRRD
Sbjct: 61  PYNNXXXXXXXXXXXXXXXPYSSDHFRIYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRD 120

Query: 121 PRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFA 180
           PRRF+YSG +CP++RRG C RGD CEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFA
Sbjct: 121 PRRFNYSGQVCPEYRRGSCSRGDNCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFA 180

Query: 181 HSPRELRLLPPVSNFQGGSCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATSSPTSTLIG 240
           H+PR+LR+LP  S+    SC    K+     S+++ SNH CLFCHC   A SSPTSTL+G
Sbjct: 181 HTPRQLRVLPLNSSPPELSC----KKKLFNNSSSSVSNHCCLFCHC---ANSSPTSTLLG 240

Query: 241 MSHLSPPXXXXXXXVKPQSLNGFSSISRY--------NPDPSKLN-GVISYKDSMAELMN 300
            SHLSPPXXXXXXX    SLNGFS ISRY        +  P  LN GV SYKD + ELM+
Sbjct: 241 RSHLSPPXXXXXXXANHHSLNGFSPISRYSDRFVSSESSAPHNLNHGVQSYKDVLTELMS 300

Query: 301 SIESMNIDELNAALAASASRQTIPWIDVSSLNTEDQLQFVLSPSTPNVSATSMNFS---- 360
           S+++MN  E ++ L  SA    +P +DVS  N EDQ QF+LSPSTP+ S ++  FS    
Sbjct: 301 SLDAMNFSETSSPL--SAKSPNVPCLDVSFNNIEDQQQFILSPSTPSPSKSANFFSGDCS 360

Query: 361 ---------VNNKGNADNGWASASASASDPDLGWVNDLLM 364
                     NN  N +        S SDPDLGWVN+LLM
Sbjct: 361 SKSLFSEENNNNINNHEYKVNENGCSCSDPDLGWVNELLM 391

[Close]
BLAST of Carg19245 vs. TrEMBL
Match: tr|U5FMC6|U5FMC6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G013400v3 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.2e-99
Identity = 219/397 (55.16%), Postives = 268/397 (67.51%), Query Frame = 0 

Query: 1   MSSVCAEEQKFQFQFQL--PSSCSSIIEDINGEMCSDSPRFS----FAVESLLQKFLPFN 60
           MS++CAE+ K     QL  P      +E + G++ +             E+ LQ+FLP+N
Sbjct: 1   MSTICAEQHKPYTPHQLLSPKRPFRDLEILPGKLLTKKTHQETLDMSPYETNLQRFLPYN 60

Query: 61  ---GEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY 120
               E V + + DPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY
Sbjct: 61  DYSNEKVLDGELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHY 120

Query: 121 SGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPREL 180
           SGT+CP+F+RGGC RG+ CEF+HGVFECWLHP+RYRTEACKDGKNCKRKVCFFAHSPR+L
Sbjct: 121 SGTVCPEFKRGGCSRGENCEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQL 180

Query: 181 RLLPPVSNFQGGSCSSPNKRSSTLRSAAAGSNHG--CLFCHCGGAATSSPTSTLIGMSHL 240
           R+LP VS+           R+ +L S  +  NH   C+ CH   + TSSPTSTL+GMSH+
Sbjct: 181 RILPEVSS-----------RNKSLASPCSSLNHSHCCVVCH---SMTSSPTSTLLGMSHM 240

Query: 241 SPP----XXXXXXXVKPQSLNGFSSISRYNPDPSKLN-GVISYKDSMAELMNSIESMNID 300
           SPP    XXXXXXX K QSL+GFS ISRYN   SK   GV+SYKD ++ELM+S+E+MN +
Sbjct: 241 SPPXXXXXXXXXXXXKHQSLSGFSPISRYNETLSKFRAGVVSYKDVLSELMSSLEAMNFN 300

Query: 301 E---LNAALAASAS-----RQTIPW-IDVSSLNTEDQLQFVLSPSTPNVSATSMN----- 360
           E   +++ ++ S +       T PW IDV S + EDQ QF+LSPSTP  S+   N     
Sbjct: 301 EGASVSSPMSLSTNHNRNVNSTTPWNIDV-SFSGEDQPQFILSPSTPTPSSKFFNGDCSS 360

Query: 361 ---FSVNNKGNADNGWASAS-ASASDPDLGWVNDLLM 364
                V++K N  N       A  SDPDLGWVN+LLM
Sbjct: 361 NKGLFVDDKINDHNNIGDGGLACTSDPDLGWVNELLM 382

The following BLAST results are available for this feature:
BLAST of Carg19245 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023554528.15.9e-20698.07zinc finger CCCH domain-containing protein 2-like [Cucurbita pepo subsp. pepo][more]
XP_022969147.13.8e-20597.52zinc finger CCCH domain-containing protein 2-like [Cucurbita maxima][more]
XP_022952114.11.3e-20096.42zinc finger CCCH domain-containing protein 2-like [Cucurbita moschata][more]
XP_023531320.11.9e-16476.86zinc finger CCCH domain-containing protein 2-like [Cucurbita pepo subsp. pepo][more]
XP_022989282.16.2e-16376.28zinc finger CCCH domain-containing protein 2-like [Cucurbita maxima][more]
BLAST of Carg19245 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03790.17.7e-7548.55Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G44260.18.3e-6944.76Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G19810.16.6e-5860.24CCCH-type zinc finger family protein[more]
AT4G29190.11.5e-5769.12Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G25900.11.2e-5467.44Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Carg19245 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZWA1|C3H2_ARATH1.4e-7348.55Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9FKW2|C3H61_ARATH1.5e-6744.76Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|O82199|C3H20_ARATH1.2e-5660.24Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9M0G2|C3H49_ARATH2.6e-5669.12Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9FU27|C3H2_ORYSJ7.7e-5662.82Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=... [more]
BLAST of Carg19245 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K2E3|A0A0A0K2E3_CUCSA1.3e-14880.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049250 PE=4 SV=1[more]
tr|A0A1S3C0P5|A0A1S3C0P5_CUCME2.3e-13473.70zinc finger CCCH domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC... [more]
tr|A0A2I4E633|A0A2I4E633_9ROSI9.0e-11057.56zinc finger CCCH domain-containing protein 2-like OS=Juglans regia OX=51240 GN=L... [more]
tr|A0A2N9G7S1|A0A2N9G7S1_FAGSY4.9e-10054.75Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26589 PE=4 SV=1[more]
tr|U5FMC6|U5FMC6_POPTR4.2e-9955.16Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G013400v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19245-RACarg19245-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 145..168
e-value: 1.6
score: 14.7
coord: 110..136
e-value: 0.031
score: 23.5
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 145..169
score: 6.484
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 111..137
score: 12.577
NoneNo IPR availableGENE3DG3DSA:1.10.150.840coord: 101..180
e-value: 2.9E-8
score: 35.1
NoneNo IPR availablePANTHERPTHR14493UNCHARACTERIZEDcoord: 39..279
NoneNo IPR availablePANTHERPTHR14493:SF74RING FINGER PROTEIN UNKEMPTcoord: 39..279
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 109..139

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19245Cla002235Watermelon (97103) v1carwmB0877
Carg19245Csa7G049250Cucumber (Chinese Long) v2carcuB0892
Carg19245MELO3C018709Melon (DHL92) v3.5.1carmeB0864
Carg19245ClCG07G002530Watermelon (Charleston Gray)carwcgB0854
Carg19245CSPI07G04910Wild cucumber (PI 183967)carcpiB0912
Carg19245Cucsa.195640Cucumber (Gy14) v1carcgyB0998
Carg19245CmaCh19G009950Cucurbita maxima (Rimu)carcmaB1214
Carg19245CmaCh11G019120Cucurbita maxima (Rimu)carcmaB1212
Carg19245CmoCh19G010360Cucurbita moschata (Rifu)carcmoB1183
Carg19245CmoCh11G019940Cucurbita moschata (Rifu)carcmoB1180
Carg19245Lsi11G017050Bottle gourd (USVL1VR-Ls)carlsiB796
Carg19245Cp4.1LG15g08070Cucurbita pepo (Zucchini)carcpeB1220
Carg19245Cp4.1LG04g02750Cucurbita pepo (Zucchini)carcpeB1224
Carg19245CsGy7G004460Cucumber (Gy14) v2carcgybB0865
Carg19245MELO3C018709.2Melon (DHL92) v3.6.1carmedB0873
Carg19245CsaV3_7G005830Cucumber (Chinese Long) v3carcucB0916
Carg19245Cla97C07G130860Watermelon (97103) v2carwmbB0917
Carg19245Bhi05G001686Wax gourdcarwgoB1023
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg19245Silver-seed gourdcarcarB590
Carg19245Cucumber (Gy14) v2carcgybB0864
Carg19245Cucurbita maxima (Rimu)carcmaB1211
Carg19245Cucurbita maxima (Rimu)carcmaB1213
Carg19245Cucurbita moschata (Rifu)carcmoB1179
Carg19245Cucurbita pepo (Zucchini)carcpeB1223
Carg19245Wild cucumber (PI 183967)carcpiB0911
Carg19245Cucumber (Chinese Long) v2carcuB0891
Carg19245Cucumber (Chinese Long) v3carcucB0915
Carg19245Melon (DHL92) v3.5.1carmeB0865
Carg19245Melon (DHL92) v3.6.1carmedB0874
Carg19245Watermelon (Charleston Gray)carwcgB0855
Carg19245Watermelon (97103) v1carwmB0878
Carg19245Watermelon (97103) v2carwmbB0912
Carg19245Watermelon (97103) v2carwmbB0918