CmaCh19G009050 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G009050
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDouble-stranded RNA-binding motif protein
LocationCma_Chr19 : 8213884 .. 8216373 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCATACAGCGTAGCCACACACAGAGAGAGGGGAAAAAGAATACTCCTAGGCCACGGAATTAAATTAAAATTTCGTTCCAGAATCCCTAAATTTCCTTCATGGAAGGAGGAGGAGACGGCGTCGATTTGTTGAAGCAGGAAGGCAGAGTCGGCGAGTCAACGGCGGCGAGTCTGGATGGAATGGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTGCTGGAAGAGGCTTTCACAGACGCGTCGTATTCGCCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTAGGCGATTCGGTGTTGAATTTTCTAATAACAAGAGAGCAATACTTCTCGAATCCGAATCTGTCGCCCGGTTCACTGACTCGTCTCCGAGCGGCGAATGTGGACACCGAAAAGCTTGCTCGTGTTGCGATTACGCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGATCTTGATCAGAAAGTAAGTATCGATTGCTTTGATTTTTCATCGTTTTCATCGACTGCTTCTTTTTTTCGCTCTCTCTCAACTTCCTCTGTTTTCTTCTGCTTGTTTCTTAATTATGATCATTAACTGTTAACCAACCCACTAATTACGATATTTCTTTTCTCTTTCGCCTCTTCAATTTTATACCTTTTTAAAAAAATTCAATTCTGAAATTTTTGTTTCAAAATTTAAAATCTTAAATATATTTTTTATTGCCTAAATTTAATTCAAACAATTTGCGTATTTGATTAATAATTTATCCATTTATTAAAATCATATGAACTAAAATTTAGATATTTGAAAATATATAAGATTAATGGAAGTTCTGTAATAGAATATAAAAATTGAAAATTTAATTAATTCGATTGCAACTATAAAATTTAATCTAAAAGTATATAAGGAACCTTTTCCATAACCATTATTTTTTAAATATAATTTCGTTCTTTTTTTCCTTTTTCGGTAAGGATTTTTTTTTCCCAAAATCTTTATTTTATATTTTTTTGTGCAATTTTAGTAGTAAAATCGGAGAGAAATATATTCCGTCTCTTTCCTAAAATTGCTTTTGAATTTTTTTCTTTTTCGAAAAACCCTCTTGTGTTTGATTTAAATTAGTCAATATTCGTTTAATTCTTTTTGTATAAAGGTAAACAATTTTTTTAGTTGATTCAACGAAATATAAAGTGACAGTAATAGTAATTAATTAATTAAAAAGACGTGATAATTCATGGAAATTAATTGTGGTTTAGGGCATGCTCTTACATTTATTCTTTTGAAATATTTGAATCTTTTAAATTAATTAATAAGACGTGAAAATTAAATGTAGCGTTAATTGTTTTGAAATCCTATTTTTTAATCTTTATTTTATTTCTTCTATTATATATTATATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCGTTTTTGGGGAATAAATAGAATCATTTATTTTTCGAATTAAATTAGGTTGGGTATTAAAGTCATTATTTAAAATTTGTTTGTGTGTGACAACTAGATAGAAGAGTTTAGCAAGAATATAGAGGAGTACCCATTGCATTCAAACGGAATGATTAAAGCTCCAAAGATACTAGCGGATATAGTAGAATCATGCATTGGAGCAGTTTTCACAGATAGTAACTCGATCGACACAGTTTGGACGGTAAATACATTTAAAAAAACAACCCCGATCAAAATTTTGAATTATAATGGTAAGTTTTGATTGAAGTATAGGATGGTTTTATCTGTGTAGATATTCAAGGGTCTAATGGAGCCATTGATAACATTGAAGACCATGAAAAGACACCCGATGACGGAGCTGACTGAAATGTGTCAAAAAAGGAACCTGAAGTGGGAATTCGTGGACTTATGGGAAGAAAGAAAGGAGATTCACGTTCTGATAGACAAGCAGCTGGTTGGGAAAGGAAGCTATGGGAAGAAGCTCATTGCACAAAATCGAGCTGCAAAAGATGCTTTGGACAACTTCCACACAATTCTTGGCCAATTTAATGAACCTTGTCAACCTATGTAATCTATTCCTAATTATAATTACCCTTTTTATTTATTTATTTATTTATTAATTAATCATTCTTTTATCTCTTTCAAATCAG

mRNA sequence

ATTTCATACAGCGTAGCCACACACAGAGAGAGGGGAAAAAGAATACTCCTAGGCCACGGAATTAAATTAAAATTTCGTTCCAGAATCCCTAAATTTCCTTCATGGAAGGAGGAGGAGACGGCGTCGATTTGTTGAAGCAGGAAGGCAGAGTCGGCGAGTCAACGGCGGCGAGTCTGGATGGAATGGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTGCTGGAAGAGGCTTTCACAGACGCGTCGTATTCGCCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTAGGCGATTCGGTGTTGAATTTTCTAATAACAAGAGAGCAATACTTCTCGAATCCGAATCTGTCGCCCGGTTCACTGACTCGTCTCCGAGCGGCGAATGTGGACACCGAAAAGCTTGCTCGTGTTGCGATTACGCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGATCTTGATCAGAAAATAGAAGAGTTTAGCAAGAATATAGAGGAGTACCCATTGCATTCAAACGGAATGATTAAAGCTCCAAAGATACTAGCGGATATAGTAGAATCATGCATTGGAGCAGTTTTCACAGATAGTAACTCGATCGACACAGTTTGGACGATATTCAAGGGTCTAATGGAGCCATTGATAACATTGAAGACCATGAAAAGACACCCGATGACGGAGCTGACTGAAATGTGTCAAAAAAGGAACCTGAAGTGGGAATTCGTGGACTTATGGGAAGAAAGAAAGGAGATTCACGTTCTGATAGACAAGCAGCTGGTTGGGAAAGGAAGCTATGGGAAGAAGCTCATTGCACAAAATCGAGCTGCAAAAGATGCTTTGGACAACTTCCACACAATTCTTGGCCAATTTAATGAACCTTGTCAACCTATGTAATCTATTCCTAATTATAATTACCCTTTTTATTTATTTATTTATTTATTAATTAATCATTCTTTTATCTCTTTCAAATCAG

Coding sequence (CDS)

ATGGAAGGAGGAGGAGACGGCGTCGATTTGTTGAAGCAGGAAGGCAGAGTCGGCGAGTCAACGGCGGCGAGTCTGGATGGAATGGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTGCTGGAAGAGGCTTTCACAGACGCGTCGTATTCGCCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTAGGCGATTCGGTGTTGAATTTTCTAATAACAAGAGAGCAATACTTCTCGAATCCGAATCTGTCGCCCGGTTCACTGACTCGTCTCCGAGCGGCGAATGTGGACACCGAAAAGCTTGCTCGTGTTGCGATTACGCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGATCTTGATCAGAAAATAGAAGAGTTTAGCAAGAATATAGAGGAGTACCCATTGCATTCAAACGGAATGATTAAAGCTCCAAAGATACTAGCGGATATAGTAGAATCATGCATTGGAGCAGTTTTCACAGATAGTAACTCGATCGACACAGTTTGGACGATATTCAAGGGTCTAATGGAGCCATTGATAACATTGAAGACCATGAAAAGACACCCGATGACGGAGCTGACTGAAATGTGTCAAAAAAGGAACCTGAAGTGGGAATTCGTGGACTTATGGGAAGAAAGAAAGGAGATTCACGTTCTGATAGACAAGCAGCTGGTTGGGAAAGGAAGCTATGGGAAGAAGCTCATTGCACAAAATCGAGCTGCAAAAGATGCTTTGGACAACTTCCACACAATTCTTGGCCAATTTAATGAACCTTGTCAACCTATGTAA

Protein sequence

MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDALDNFHTILGQFNEPCQPM
Homology
[Close]
BLAST of CmaCh19G009050 vs. Swiss-Prot
Match: RTL3_ORYSJ (Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica GN=Os06g0358800 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.4e-59
Identity = 119/236 (50.42%), Postives = 165/236 (69.92%), Query Frame = 1 

Query: 28  MEAILNYEFRDKRLLEEAFTDAS-YSPENCS-SFERLEYVGDSVLNFLITREQYFSNPNL 87
           +E++L YEFRDK L+EEA T  S Y P     ++ERLEY+GD+VL  +++RE + +   L
Sbjct: 42  VESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLTYGQL 101

Query: 88  SPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNGMI 147
            PG LTRLRAANVD EKLARVA+ HG H +LRH   +LD +I +F + +  YP+HSNG++
Sbjct: 102 QPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMYPIHSNGLL 161

Query: 148 KAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMCQKR 207
             PK+L D+VES IGA++ DSN + + VW +F+ L +PLI+L+T+ +HP++EL E CQK 
Sbjct: 162 DPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSELFEFCQKT 221

Query: 208 NLKWEFV-DLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNFHTILGQ 259
               + V D W++   + VLID ++VG+ +Y  KK IAQNRAAK ALD     LGQ
Sbjct: 222 RRGVKIVKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDKLKETLGQ 277

[Close]
BLAST of CmaCh19G009050 vs. Swiss-Prot
Match: DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.5e-42
Identity = 106/259 (40.93%), Postives = 148/259 (57.14%), Query Frame = 1 

Query: 1    MEGGGDGVDLLKQEGRVGESTAASLD--GMEAILNYEFRDKRLLEEAFTDASYSPENCSS 60
            +E   D VD   +   V ES   S+D  G+E  L YEF++K LL EA T AS      S 
Sbjct: 1533 VEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSC 1592

Query: 61   FERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH 120
            ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH
Sbjct: 1593 YQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRH 1652

Query: 121  NKADLDQKIEEFSKNIEE------YPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDT- 180
              + L+++I EF K ++       +     G  KAPK+L DIVES  GA+F DS    T 
Sbjct: 1653 GSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTA 1712

Query: 181  VWTIFKGLMEPLITLKTMKRHPMTELTEMCQKRNLKWEF-VDLWEERKEIHVLIDKQLVG 240
             W +F+ L++P++T +T+  HP+ EL E CQ++    E+          + V ID   VG
Sbjct: 1713 AWKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVG 1772

Query: 241  KGSYGKKLIAQNRAAKDAL 250
                 +K +AQ  AA++AL
Sbjct: 1773 VAQNPQKKMAQKLAARNAL 1791

[Close]
BLAST of CmaCh19G009050 vs. Swiss-Prot
Match: RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.0e-41
Identity = 94/237 (39.66%), Postives = 150/237 (63.29%), Query Frame = 1 

Query: 20  STAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 79
           S   S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y
Sbjct: 55  SEMESMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSAIGLAISNYLY 114

Query: 80  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNI---EE 139
            + P+L P  L+ LRAANV TEKLARV++ HG + +LR N   LD+K++EFS+ +   ++
Sbjct: 115 LTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDD 174

Query: 140 YPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKR--HP 199
             +   G++KAPK+LAD+ ES  GAV+ D N  +  +W IF+GL+EP++TL  +++   P
Sbjct: 175 LSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQP 234

Query: 200 MTELTEMCQKRNLKWEFVDLWEERKEIHVL-IDKQLVGKGSYGKKLIAQNRAAKDAL 250
           ++ L ++C K   + +  +  +    I V+ +D +L+  G    K IA+  AAK+AL
Sbjct: 235 VSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEAL 289

[Close]
BLAST of CmaCh19G009050 vs. Swiss-Prot
Match: RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 3.3e-40
Identity = 93/231 (40.26%), Postives = 142/231 (61.47%), Query Frame = 1 

Query: 28  MEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSP 87
           +E +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y +NP L P
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFA-DDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGP 99

Query: 88  GSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYP-------LH 147
           G L+ LRAAN+ TEKLARVA+ H  +  LR N   LD  + +F + +++ P        +
Sbjct: 100 GPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPY 159

Query: 148 SNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELTE 207
              ++KAPK+LADIVE+   AV+ D    ++ +W + + L EP+IT +T+   P+T L E
Sbjct: 160 GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPVTMLHE 219

Query: 208 MCQKRNLKWEFVDLWEE--RKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDA 249
           +CQK     +F   W++     ++V +  +LVG GS  +K+IA+  AA+DA
Sbjct: 220 LCQKHGKMAQF-KTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDA 268

[Close]
BLAST of CmaCh19G009050 vs. Swiss-Prot
Match: DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-39
Identity = 94/234 (40.17%), Postives = 137/234 (58.55%), Query Frame = 1 

Query: 24   SLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 83
            + D ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  
Sbjct: 1537 NFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYT 1596

Query: 84   NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSN- 143
            +L PG LT LRAA V+ E  ARVA+ H  H +LRH  + L+ +I EF K+++E  L    
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656

Query: 144  -----GMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTE 203
                 G  KAPK+L DIVES  GA+F DS      VW +F+ L+ P++T +T+  HP+ E
Sbjct: 1657 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVRE 1716

Query: 204  LTEMCQKRNLKWEF-VDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDAL 250
            L E CQ++    E+          + V +D   +G     +K +AQ  AA++AL
Sbjct: 1717 LQERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNAL 1770

[Close]
BLAST of CmaCh19G009050 vs. TrEMBL
Match: A0A0A0K1J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041940 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.5e-119
Identity = 220/264 (83.33%), Postives = 234/264 (88.64%), Query Frame = 1 

Query: 3   GGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 62
           GGG+ V+        G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERL
Sbjct: 20  GGGEAVN--------GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 79

Query: 63  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 122
           EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD
Sbjct: 80  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 139

Query: 123 LDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEP 182
           L QKIEEF ++IEEYPLHSNGMIKAPK+LADIVES IGAVF DSN IDTVW IFK LMEP
Sbjct: 140 LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDTVWKIFKELMEP 199

Query: 183 LITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQN 242
           LITLKTMK+HPMTELTEMCQKR+LK EF D WEE KEI VLI+KQ+VGKGSY KKLIAQN
Sbjct: 200 LITLKTMKKHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQVVGKGSYRKKLIAQN 259

Query: 243 RAAKDALDNFHTILGQFNEPCQPM 267
           RAAK+AL+N  T   QFN+PCQPM
Sbjct: 260 RAAKNALENLDTFFPQFNQPCQPM 275

[Close]
BLAST of CmaCh19G009050 vs. TrEMBL
Match: A0A067K3V1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13725 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.1e-78
Identity = 159/264 (60.23%), Postives = 198/264 (75.00%), Query Frame = 1 

Query: 6   DGVDLLKQEG--RVGESTAA----SLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSF 65
           +GV   +QE      EST      SL+ +E IL Y+F+DK LLEEAFTD+S+ P+   S+
Sbjct: 28  EGVQQQEQESLESTAESTQVESLPSLEEVEDILKYKFKDKNLLEEAFTDSSF-PDRLFSY 87

Query: 66  ERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN 125
           ERLEYVGDSVLN L T+E YF  PNL PG+LTRLRAANVD+EKLARVA+  G HR+LRHN
Sbjct: 88  ERLEYVGDSVLNLLFTKEHYFKYPNLQPGALTRLRAANVDSEKLARVAVKLGLHRFLRHN 147

Query: 126 KADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKG 185
           K  L+++I EFS+ I +YPLHS+G++  PK+LADIVES IGAVF DSN S+DT W +FK 
Sbjct: 148 KPLLEEQIREFSQAILDYPLHSHGLVDVPKVLADIVESVIGAVFIDSNSSVDTTWKVFKD 207

Query: 186 LMEPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KK 245
           L+EP+I  +T+K HP+TEL E+CQKRNLK +FVD W E     VLI+ QL+G+G+YG KK
Sbjct: 208 LLEPIINQETLKVHPVTELYEVCQKRNLKVKFVDSWRESMAFDVLINDQLIGRGTYGLKK 267

Query: 246 LIAQNRAAKDALDNFHTILGQFNE 262
            IA NRAAKDALDN   IL + +E
Sbjct: 268 EIAHNRAAKDALDNIGRILDEKHE 290

[Close]
BLAST of CmaCh19G009050 vs. TrEMBL
Match: B9GTV4_POPTR (Ribonuclease 3 family protein OS=Populus trichocarpa GN=POPTR_0002s21490g PE=4 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 152/246 (61.79%), Postives = 187/246 (76.02%), Query Frame = 1 

Query: 15  GRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLI 74
           G+        LD +E IL+Y+F+ K+LLEEA T AS+S + C S+ERLEYVGDSVLN L 
Sbjct: 28  GKQTTDWVTDLDEVEEILHYKFKSKKLLEEALTHASFS-DQCFSYERLEYVGDSVLNLLF 87

Query: 75  TREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNI 134
           T+EQYF  P+L PG LTRLR+ANVDTEKLARVAI H  HRYLRH    L+++I EFS+ I
Sbjct: 88  TKEQYFLYPDLPPGPLTRLRSANVDTEKLARVAIKHKLHRYLRHKMPLLEEQIREFSQAI 147

Query: 135 EEYPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHP 194
            +YPLHSNG+++ PK LADIVE+ IGAVF DSN SID VW IFK L+EP+I+ +T+K HP
Sbjct: 148 LDYPLHSNGLVETPKALADIVEAAIGAVFIDSNFSIDVVWKIFKDLLEPIISQETLKVHP 207

Query: 195 MTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNF 254
           +TEL E+CQKRNLK +FVDLW+E     V ID Q VG+G+YG KK IA NRAAK+AL+N 
Sbjct: 208 VTELYEVCQKRNLKVKFVDLWKENMAFDVFIDDQFVGRGTYGLKKEIAHNRAAKNALNNI 267

Query: 255 HTILGQ 259
             IL +
Sbjct: 268 RKILSE 272

[Close]
BLAST of CmaCh19G009050 vs. TrEMBL
Match: G7J6N8_MEDTR (Ribonuclease III domain protein OS=Medicago truncatula GN=MTR_3g079980 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.6e-76
Identity = 149/235 (63.40%), Postives = 183/235 (77.87%), Query Frame = 1 

Query: 25  LDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPN 84
           L  +EAIL YEF++K LLEEAFT  +Y  EN  S+ERLEYVGDSVLN +IT+EQ+ + P 
Sbjct: 227 LHEVEAILEYEFKNKLLLEEAFTHGTYGAENGLSYERLEYVGDSVLNLMITKEQFQAYPT 286

Query: 85  LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNGM 144
           L+PG LTRLRAANVDTEKLARVAI HG HRYLRH K  L  +I+EF+K I EYPLHSNG+
Sbjct: 287 LAPGHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQEFTKGIAEYPLHSNGL 346

Query: 145 IKAPKILADIVESCIGAVFTD-SNSIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMCQK 204
           I  PK LADIVES IGA+F D  +S++TVW +FK L+EP+I   T++RHP+TEL E+CQK
Sbjct: 347 IDVPKSLADIVESTIGAIFVDCGSSVETVWKVFKKLLEPIIDPNTIQRHPVTELHEVCQK 406

Query: 205 RNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNFHTILG 258
           ++LK +F DLW+E   I VLI+++ VG G YG KK IA NRAAK+AL+N   ILG
Sbjct: 407 KSLKLQFRDLWKETMRIEVLINEEFVGSGVYGSKKEIAHNRAAKNALENMEKILG 461

[Close]
BLAST of CmaCh19G009050 vs. TrEMBL
Match: A0A0D2Q2E8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G215700 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.7e-76
Identity = 151/239 (63.18%), Postives = 184/239 (76.99%), Query Frame = 1 

Query: 20  STAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 79
           +T  SLD +E IL YEF++K+LLEEAFTDAS   +   S ERLEYVGDSVLN L T++QY
Sbjct: 34  TTPLSLDEVEVILGYEFKNKQLLEEAFTDASLGED--FSNERLEYVGDSVLNLLFTKDQY 93

Query: 80  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPL 139
           F  P+LSPG LTRLRAANVD++KLARVA+ HGFHR+LRH K  L+ +I +FS+ I+ YPL
Sbjct: 94  FEYPDLSPGVLTRLRAANVDSDKLARVAVKHGFHRFLRHKKPLLEDQIRQFSEEIQRYPL 153

Query: 140 HSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELT 199
           HSNG++  PK LAD+VES IGAVF DSN SID VW +FK L+EP+I  +T+K HP+T+L 
Sbjct: 154 HSNGLVDVPKALADLVESVIGAVFIDSNSSIDIVWKVFKDLLEPIIRRETLKIHPVTQLY 213

Query: 200 EMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNFHTIL 257
           EMCQK+NLK +FVDLW+E     V +D Q VG+GS   KK IA NRAAKDALDN   IL
Sbjct: 214 EMCQKKNLKVKFVDLWKESTTFDVFVDDQFVGRGSCRLKKEIAHNRAAKDALDNIVRIL 270

[Close]
BLAST of CmaCh19G009050 vs. TAIR10
Match: AT4G15417.1 (AT4G15417.1 RNAse II-like 1)

HSP 1 Score: 251.1 bits (640), Expect = 7.4e-67
Identity = 132/253 (52.17%), Postives = 168/253 (66.40%), Query Frame = 1 

Query: 6   DGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYV 65
           DG D  K  G         ++ +E ILNY+F+DK LL +AFTDASY  +   S+E LE +
Sbjct: 10  DGKDNTKTIGSADPDQLMEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELL 69

Query: 66  GDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQ 125
           GDS+LN  I  +     P  +PG LT+LRA NVDTEKLARVA+ H  + YLRH K  L++
Sbjct: 70  GDSILNMGIIYDFIKLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEE 129

Query: 126 KIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLIT 185
           +I EF + +E+YPLHSNG++K PK+LADIVES IGA+F D NS +TVW + K L+EP+I 
Sbjct: 130 QILEFVEAMEKYPLHSNGLLKVPKVLADIVESTIGAIFMDCNSTETVWKVIKPLLEPIIH 189

Query: 186 LKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRA 245
           L  MK HPMTEL EMCQKRNLK    D WEE +     I+ + VG G +  KK  A+N A
Sbjct: 190 LDKMKSHPMTELNEMCQKRNLKLTSKDTWEENQTYCFHIEDKFVGCGHHPVKKETARNFA 249

Query: 246 AKDALDNFHTILG 258
           AK+A+DNF    G
Sbjct: 250 AKNAIDNFAKFFG 262

[Close]
BLAST of CmaCh19G009050 vs. TAIR10
Match: AT1G01040.2 (AT1G01040.2 dicer-like 1)

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-43
Identity = 106/259 (40.93%), Postives = 148/259 (57.14%), Query Frame = 1 

Query: 1    MEGGGDGVDLLKQEGRVGESTAASLD--GMEAILNYEFRDKRLLEEAFTDASYSPENCSS 60
            +E   D VD   +   V ES   S+D  G+E  L YEF++K LL EA T AS      S 
Sbjct: 1534 VEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSC 1593

Query: 61   FERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH 120
            ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH
Sbjct: 1594 YQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRH 1653

Query: 121  NKADLDQKIEEFSKNIEE------YPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDT- 180
              + L+++I EF K ++       +     G  KAPK+L DIVES  GA+F DS    T 
Sbjct: 1654 GSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTA 1713

Query: 181  VWTIFKGLMEPLITLKTMKRHPMTELTEMCQKRNLKWEF-VDLWEERKEIHVLIDKQLVG 240
             W +F+ L++P++T +T+  HP+ EL E CQ++    E+          + V ID   VG
Sbjct: 1714 AWKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVG 1773

Query: 241  KGSYGKKLIAQNRAAKDAL 250
                 +K +AQ  AA++AL
Sbjct: 1774 VAQNPQKKMAQKLAARNAL 1792

[Close]
BLAST of CmaCh19G009050 vs. TAIR10
Match: AT3G20420.1 (AT3G20420.1 RNAse THREE-like protein 2)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 94/237 (39.66%), Postives = 150/237 (63.29%), Query Frame = 1 

Query: 20  STAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 79
           S   S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y
Sbjct: 55  SEMESMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSAIGLAISNYLY 114

Query: 80  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNI---EE 139
            + P+L P  L+ LRAANV TEKLARV++ HG + +LR N   LD+K++EFS+ +   ++
Sbjct: 115 LTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDD 174

Query: 140 YPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKR--HP 199
             +   G++KAPK+LAD+ ES  GAV+ D N  +  +W IF+GL+EP++TL  +++   P
Sbjct: 175 LSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQP 234

Query: 200 MTELTEMCQKRNLKWEFVDLWEERKEIHVL-IDKQLVGKGSYGKKLIAQNRAAKDAL 250
           ++ L ++C K   + +  +  +    I V+ +D +L+  G    K IA+  AAK+AL
Sbjct: 235 VSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEAL 289

[Close]
BLAST of CmaCh19G009050 vs. TAIR10
Match: AT3G03300.1 (AT3G03300.1 dicer-like 2)

HSP 1 Score: 135.2 bits (339), Expect = 5.9e-32
Identity = 79/189 (41.80%), Postives = 113/189 (59.79%), Query Frame = 1 

Query: 28   MEAILNYEFRDKRLLEEAFTDASYS-PENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 87
            ME++LNY F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LS
Sbjct: 1152 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1211

Query: 88   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHS----N 147
            PG LT +R+A+V+ E  A VA+    H+++ +    L + I       E+  L S     
Sbjct: 1212 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWE 1271

Query: 148  GMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMC 207
              I  PK+L D++ES  GA+F DS  + + V+   K L+  +IT +T+K HP+ ELTE+C
Sbjct: 1272 SDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELC 1331

Query: 208  QKRNLKWEF 211
            Q    KW+F
Sbjct: 1332 Q----KWQF 1336

[Close]
BLAST of CmaCh19G009050 vs. TAIR10
Match: AT5G20320.1 (AT5G20320.1 dicer-like 4)

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 69/193 (35.75%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 20   STAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 79
            +T  +L+ +E  L+Y+F  K LL +AF   SY+      ++RLE++GD+VL++L+T   +
Sbjct: 1287 TTRNNLETLENQLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFF 1346

Query: 80   FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPL 139
               P L PG LT LR+ +V+ E LA VA++    R+L      L + IE+++  +   PL
Sbjct: 1347 TVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPL 1406

Query: 140  HSNGM--IKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTE 199
             S      + PK+L D+VESC+GA+F D   +++ VWT+    ++P+  L  ++  P+ E
Sbjct: 1407 ASGQSEGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKE 1466

Query: 200  LTEMCQKRNLKWE 210
            L E+CQ  + KW+
Sbjct: 1467 LIELCQ--SYKWD 1477

[Close]
BLAST of CmaCh19G009050 vs. NCBI nr
Match: gi|449453708|ref|XP_004144598.1| (PREDICTED: ribonuclease 3-like protein 3 [Cucumis sativus])

HSP 1 Score: 436.4 bits (1121), Expect = 3.5e-119
Identity = 220/264 (83.33%), Postives = 234/264 (88.64%), Query Frame = 1 

Query: 3   GGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 62
           GGG+ V+        G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERL
Sbjct: 20  GGGEAVN--------GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 79

Query: 63  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 122
           EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD
Sbjct: 80  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 139

Query: 123 LDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEP 182
           L QKIEEF ++IEEYPLHSNGMIKAPK+LADIVES IGAVF DSN IDTVW IFK LMEP
Sbjct: 140 LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDTVWKIFKELMEP 199

Query: 183 LITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQN 242
           LITLKTMK+HPMTELTEMCQKR+LK EF D WEE KEI VLI+KQ+VGKGSY KKLIAQN
Sbjct: 200 LITLKTMKKHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQVVGKGSYRKKLIAQN 259

Query: 243 RAAKDALDNFHTILGQFNEPCQPM 267
           RAAK+AL+N  T   QFN+PCQPM
Sbjct: 260 RAAKNALENLDTFFPQFNQPCQPM 275

[Close]
BLAST of CmaCh19G009050 vs. NCBI nr
Match: gi|802658813|ref|XP_012080705.1| (PREDICTED: ribonuclease 3-like protein 3 [Jatropha curcas])

HSP 1 Score: 300.4 bits (768), Expect = 3.0e-78
Identity = 159/264 (60.23%), Postives = 198/264 (75.00%), Query Frame = 1 

Query: 6   DGVDLLKQEG--RVGESTAA----SLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSF 65
           +GV   +QE      EST      SL+ +E IL Y+F+DK LLEEAFTD+S+ P+   S+
Sbjct: 28  EGVQQQEQESLESTAESTQVESLPSLEEVEDILKYKFKDKNLLEEAFTDSSF-PDRLFSY 87

Query: 66  ERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN 125
           ERLEYVGDSVLN L T+E YF  PNL PG+LTRLRAANVD+EKLARVA+  G HR+LRHN
Sbjct: 88  ERLEYVGDSVLNLLFTKEHYFKYPNLQPGALTRLRAANVDSEKLARVAVKLGLHRFLRHN 147

Query: 126 KADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKG 185
           K  L+++I EFS+ I +YPLHS+G++  PK+LADIVES IGAVF DSN S+DT W +FK 
Sbjct: 148 KPLLEEQIREFSQAILDYPLHSHGLVDVPKVLADIVESVIGAVFIDSNSSVDTTWKVFKD 207

Query: 186 LMEPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KK 245
           L+EP+I  +T+K HP+TEL E+CQKRNLK +FVD W E     VLI+ QL+G+G+YG KK
Sbjct: 208 LLEPIINQETLKVHPVTELYEVCQKRNLKVKFVDSWRESMAFDVLINDQLIGRGTYGLKK 267

Query: 246 LIAQNRAAKDALDNFHTILGQFNE 262
            IA NRAAKDALDN   IL + +E
Sbjct: 268 EIAHNRAAKDALDNIGRILDEKHE 290

[Close]
BLAST of CmaCh19G009050 vs. NCBI nr
Match: gi|1000936777|ref|XP_015584136.1| (PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 3 [Ricinus communis])

HSP 1 Score: 300.1 bits (767), Expect = 4.0e-78
Identity = 154/238 (64.71%), Postives = 185/238 (77.73%), Query Frame = 1 

Query: 24  SLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 83
           SLDG+E IL Y+F+++ LLEEAFTD+S+ P  C S+ERLE+VGDSVLN L T+E YF  P
Sbjct: 31  SLDGVEEILKYKFKNRSLLEEAFTDSSF-PGKCFSYERLEHVGDSVLNLLFTKEHYFKYP 90

Query: 84  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNG 143
           NL PG+LTRLRAANVDTEKLARVA+ HGFHR+LRH K  L+++I EFS+ I EYPLHSNG
Sbjct: 91  NLPPGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLLEEQIREFSQAILEYPLHSNG 150

Query: 144 MIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLME--PLITLKTMKRHPMTELTEM 203
           ++  PK+LADIVES IGAVF DSN S+DTVW +        PL++  T+K HP T+L E+
Sbjct: 151 LVDVPKVLADIVESAIGAVFIDSNSSVDTVWKVLLSSSSRIPLLSSSTLKIHPXTQLYEV 210

Query: 204 CQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNFHTILG 258
           CQKRNLK +FVDLW E   + V ID QLVG+G+YG KK IA NRAAKDALDN   ILG
Sbjct: 211 CQKRNLKVKFVDLWRESMAVDVFIDDQLVGRGTYGLKKEIAHNRAAKDALDNIGRILG 267

[Close]
BLAST of CmaCh19G009050 vs. NCBI nr
Match: gi|694377586|ref|XP_009365085.1| (PREDICTED: ribonuclease 3-like protein 3 [Pyrus x bretschneideri])

HSP 1 Score: 299.7 bits (766), Expect = 5.2e-78
Identity = 149/238 (62.61%), Postives = 184/238 (77.31%), Query Frame = 1 

Query: 24  SLDGMEAILNYEFRDKRLLEEAFTDASYSPENCS--SFERLEYVGDSVLNFLITREQYFS 83
           +L+ +E I+ Y+F +K LL+EAFT  S+ P  CS  S+ERLEYVGD+VLN L +REQY  
Sbjct: 41  NLEEVEEIIRYKFENKVLLQEAFTHPSFVPAECSGSSYERLEYVGDAVLNLLFSREQYLL 100

Query: 84  NPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHS 143
            P+L+PG LTRLRAANVDTEKLARVAI HG HRYLRH K  L+++I EF++ I EYPLHS
Sbjct: 101 YPDLAPGPLTRLRAANVDTEKLARVAIKHGLHRYLRHRKPLLEEQIREFARAIHEYPLHS 160

Query: 144 NGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMC 203
           NG+I APK LADIVES IGAVF D NSID VW +FK L+EP+I  KT+KRHP ++L E+C
Sbjct: 161 NGLIDAPKNLADIVESTIGAVFMDCNSIDIVWKVFKDLLEPIIDPKTIKRHPASQLHEVC 220

Query: 204 QKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNFHTILGQ 259
           QK NL   FVDLWEE+  + V I+ Q+VG+G+Y  KK +A NRAAKDALDN   ++GQ
Sbjct: 221 QKNNLNLRFVDLWEEKHTVEVFINDQIVGRGTYSLKKEVAHNRAAKDALDNMWNVIGQ 278

[Close]
BLAST of CmaCh19G009050 vs. NCBI nr
Match: gi|566159254|ref|XP_002301611.2| (ribonuclease 3 family protein [Populus trichocarpa])

HSP 1 Score: 294.3 bits (752), Expect = 2.2e-76
Identity = 152/246 (61.79%), Postives = 187/246 (76.02%), Query Frame = 1 

Query: 15  GRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLI 74
           G+        LD +E IL+Y+F+ K+LLEEA T AS+S + C S+ERLEYVGDSVLN L 
Sbjct: 28  GKQTTDWVTDLDEVEEILHYKFKSKKLLEEALTHASFS-DQCFSYERLEYVGDSVLNLLF 87

Query: 75  TREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNI 134
           T+EQYF  P+L PG LTRLR+ANVDTEKLARVAI H  HRYLRH    L+++I EFS+ I
Sbjct: 88  TKEQYFLYPDLPPGPLTRLRSANVDTEKLARVAIKHKLHRYLRHKMPLLEEQIREFSQAI 147

Query: 135 EEYPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHP 194
            +YPLHSNG+++ PK LADIVE+ IGAVF DSN SID VW IFK L+EP+I+ +T+K HP
Sbjct: 148 LDYPLHSNGLVETPKALADIVEAAIGAVFIDSNFSIDVVWKIFKDLLEPIISQETLKVHP 207

Query: 195 MTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNF 254
           +TEL E+CQKRNLK +FVDLW+E     V ID Q VG+G+YG KK IA NRAAK+AL+N 
Sbjct: 208 VTELYEVCQKRNLKVKFVDLWKENMAFDVFIDDQFVGRGTYGLKKEIAHNRAAKNALNNI 267

Query: 255 HTILGQ 259
             IL +
Sbjct: 268 RKILSE 272

The following BLAST results are available for this feature:
BLAST of CmaCh19G009050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTL3_ORYSJ5.4e-5950.42Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica GN=Os06g0358800 PE... [more]
DCL1_ARATH3.5e-4240.93Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2[more]
RTL2_ARATH3.0e-4139.66Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1[more]
RTL2_ORYSJ3.3e-4040.26Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE... [more]
DCL1_ORYSJ2.8e-3940.17Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV... [more]
BLAST of CmaCh19G009050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1J8_CUCSA2.5e-11983.33Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041940 PE=4 SV=1[more]
A0A067K3V1_JATCU2.1e-7860.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13725 PE=4 SV=1[more]
B9GTV4_POPTR1.5e-7661.79Ribonuclease 3 family protein OS=Populus trichocarpa GN=POPTR_0002s21490g PE=4 S... [more]
G7J6N8_MEDTR2.6e-7663.40Ribonuclease III domain protein OS=Medicago truncatula GN=MTR_3g079980 PE=4 SV=1[more]
A0A0D2Q2E8_GOSRA5.7e-7663.18Uncharacterized protein OS=Gossypium raimondii GN=B456_001G215700 PE=4 SV=1[more]
BLAST of CmaCh19G009050 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15417.17.4e-6752.17 RNAse II-like 1[more]
AT1G01040.22.0e-4340.93 dicer-like 1[more]
AT3G20420.11.7e-4239.66 RNAse THREE-like protein 2[more]
AT3G03300.15.9e-3241.80 dicer-like 2[more]
AT5G20320.16.1e-2935.75 dicer-like 4[more]
BLAST of CmaCh19G009050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453708|ref|XP_004144598.1|3.5e-11983.33PREDICTED: ribonuclease 3-like protein 3 [Cucumis sativus][more]
gi|802658813|ref|XP_012080705.1|3.0e-7860.23PREDICTED: ribonuclease 3-like protein 3 [Jatropha curcas][more]
gi|1000936777|ref|XP_015584136.1|4.0e-7864.71PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 3 [Ricinus communis][more]
gi|694377586|ref|XP_009365085.1|5.2e-7862.61PREDICTED: ribonuclease 3-like protein 3 [Pyrus x bretschneideri][more]
gi|566159254|ref|XP_002301611.2|2.2e-7661.79ribonuclease 3 family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR014720dsRBD_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006396 RNA processing
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0016442 RISC complex
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G009050.1CmaCh19G009050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainGENE3DG3DSA:1.10.1520.10coord: 25..185
score: 2.6
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 60..166
score: 8.5
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 40..189
score: 2.7
IPR000999Ribonuclease III domainPROSITEPS00517RNASE_3_1coord: 60..68
scor
IPR000999Ribonuclease III domainPROFILEPS50142RNASE_3_2coord: 25..167
score: 33
IPR000999Ribonuclease III domainunknownSSF69065RNase III domain-likecoord: 25..186
score: 5.06
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 192..252
score: 9.
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 24..258
score: 6.7E
NoneNo IPR availablePANTHERPTHR14950:SF29SUBFAMILY NOT NAMEDcoord: 24..258
score: 6.7E
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 149..252
score: 4.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G009050Cucsa.148740Cucumber (Gy14) v1cgycmaB0407
CmaCh19G009050Cla015618Watermelon (97103) v1cmawmB503
CmaCh19G009050Csa7G041940Cucumber (Chinese Long) v2cmacuB527
CmaCh19G009050MELO3C018835Melon (DHL92) v3.5.1cmameB461
CmaCh19G009050ClCG02G002110Watermelon (Charleston Gray)cmawcgB460
CmaCh19G009050CSPI07G03500Wild cucumber (PI 183967)cmacpiB533
CmaCh19G009050CmoCh19G009320Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G009050Lsi11G014310Bottle gourd (USVL1VR-Ls)cmalsiB472
CmaCh19G009050Cp4.1LG15g07320Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G009050MELO3C018835.2Melon (DHL92) v3.6.1cmamedB534
CmaCh19G009050CsaV3_7G003390Cucumber (Chinese Long) v3cmacucB0638
CmaCh19G009050Cla97C02G028510Watermelon (97103) v2cmawmbB531
CmaCh19G009050Bhi05G001201Wax gourdcmawgoB0652
CmaCh19G009050CsGy7G003160Cucumber (Gy14) v2cgybcmaB944
CmaCh19G009050Carg19158Silver-seed gourdcarcmaB1214
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G009050Cucurbita maxima (Rimu)cmacmaB148
CmaCh19G009050Cucurbita maxima (Rimu)cmacmaB443
CmaCh19G009050Cucurbita maxima (Rimu)cmacmaB451
CmaCh19G009050Cucurbita moschata (Rifu)cmacmoB492
CmaCh19G009050Cucurbita moschata (Rifu)cmacmoB524
CmaCh19G009050Wild cucumber (PI 183967)cmacpiB510
CmaCh19G009050Cucumber (Chinese Long) v2cmacuB505
CmaCh19G009050Melon (DHL92) v3.5.1cmameB451
CmaCh19G009050Watermelon (97103) v1cmawmB502
CmaCh19G009050Cucurbita pepo (Zucchini)cmacpeB525
CmaCh19G009050Cucurbita pepo (Zucchini)cmacpeB537
CmaCh19G009050Cucurbita pepo (Zucchini)cmacpeB545
CmaCh19G009050Cucumber (Gy14) v2cgybcmaB211
CmaCh19G009050Cucumber (Chinese Long) v3cmacucB0606
CmaCh19G009050Wax gourdcmawgoB0665