Cla97C02G028510 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGATTCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCTCGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAGTAAGTATCAGATTATATTTGTTTAATTTCTTCATCGTTCTCATCGATTACTCATTGACTTCCTTATTAATTCCTCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCGTAATTATCATCATTTAATTCTCATCCAATCCATCCATATGATCATTCTTTTCTCTTTAGTTTCCTAATTTTCTTTTACCTCTTAATCATAAACATTTGCTTTTAGGCTTCAACCACTATTTCATAGTTTTTGCATATATATTTTTTTTTTGATAAATTTTAAATTATAACAAAAAATATGTGATATATTTTTTGAAATCCATTAATAGAATGCTAATAAAGATAATTGGGTGTACTTACTCAAATTTGAATATACAGAAAAAAAGAAGTAGGATATTATTTTTTTTTATTTTTTATTTTTTTAAAGAAAAGAGACATAAAAAAATCAAATTTTACTTCAGGGGTGTAAAAAAACCTAATTAATGTGAAAGCCAACTTGAATTTGAAAACAAAAAGGGAAAAAAACAAATTAAAATTTTCATGGTTGACTTTTAAAAATTGTCTAATGAATTTTTTACATATTTAAAAATTGAAGTGGGAGGTTCTATGGGATAAAGTTTAGGAATATATAAAATAATGGTAAAAGTTTAAAATCAAAATTTAATTTAATTCAAATTTAAAATTTAAGATTTATATATAATTTAATCTAAGAGTTTTTATTTTATTTTATTTTATTGGTGTCTAGTATATTGAACTTTTTAGGTAACTATTCCTTTTAAATATGCTTTCCTCGTTTTTTTTCTTCTTTTGGCAAGGTACTTTTCCCATAATCACTTTCTCTAGACTTTTTGAGCTCTTTTAGATATAAAATTGATTAAAAAATTTGTCTTCTCTAACAAGATAAAAATAGAATTTTAGATAGATTCCTTGAATTAGAAATAAGATACTATAGGTGTGTAGAACAATCTATATTTGAGTTACATTCGCTATTATTTTTTAGAATAATCTAATTTTTATTATTTTAAATAATTATATAACATTTTAAATTAGAAATATAATTTAGACCGAAGAGATCCTTTTGAAAAATTATTTTTCTAATTTAAAACGCCATATAATTATTTACAATAATTAGAAAAAATAACTTCTTAAAAATTTGGGAATTAAAAATATATCTTCTGTAAACTTCGTAACCCCCATATTCTTTAAAGCTTGAAATAAAAAAGTAATTTTTCATTTTTAGTTCAACAGCATGTGGAGTTCACTATAGTTGATGTAAATTATAAATTAACGGAGAAGGCGTAAGATCCTGTGAAAATTAAATGTAGTAATTTATGGTGTGTTCCCACATTTATTATTATTATTTGAAATATTTGAATTTCTTAAATTAACTAAGAATGCATGAAAATTGAACGCAGTGTATGTCTTACCACTCCATTTATTCTTTCAAATCTTTTGCTTGCTCCCTAAGTTTTAAATGTTACCTATTTAGATTTTTAATTTAGTTTATAGGATTCAAAATGCCACAATTTTATATTTGAGAGTTGAGTTTTGTATCAATTTGATCCTTAAACAGACTAAATAGAAACTAAACTCACAACTTTTTTCCTATGTGTCTATTTCTTCCCTTACCTTTATTAAAACCAACCTAACATTATTCCTTATTGAATTAAAAATTCTCTTGAAATATAAAAATAATTGTAGAAACCTATGTTATGCCCGTAAAATTGGTATTATTAATTTCGAAGTCTGATGTTCAATTCACTACCTTACAATGTTGTAAAAAAATTCGAATTTATCTAAAATAACATCGAAAACAAAATATCATAAGTTATCAAGCAAAGTCTAAAAATTTAAAAATATGTTAAATCTCTTTTTGGTGAATAAATACTTAAATAGAGTGGGTTTTTCCTTTTTCTTCCTTTCTTCTTTGGGAATAAGATTATGTTATGAAAGTTAGCCCTCCCAAATACTATAACTTTGTTTGGCAAAAAGATTCCAATTCTAAATGATAGGTACAAAATGCTATAGAAGTCAAACATTTTAATTATTGCAATAAGTCTATAAATTTAACTTATATGTTACTAATTCTTTACGGCCATCAAAGGGTTGATGATAACATCAATGACGTGTGTGTGTGCATATATATATATATATATATATATATGATGTAGTTTTTTTTCTTTTGTTATTCTTATTTCTATCCACTTGAATTAAAATAGACTTTAAAACATATAGGATAGAAGATTATGTTAAAATATAAGCTTGTCTTTGTATTATCTTTAAACCTTAAAGAGTATATGATAGTAATAGTTTTTCAATCTTCAATTTTATATTTCAAATCTCTCTCTAACATTTCAAAATGTCTAATAAGCGTTGAGCTTTTTCTTTTGTCTACTAGATTCATAATAATTAAAAATTTTCTAACTAATTAATATCTTATTTATAAAATTAAATTTTATGTGTACATACAGGAATATAATTTAAACTTTAAATTAAAAAAATCTATCAAAAAATAAAAAATTTAAGTAACTATCAAACAAAATTTAATGTATAGGGACCAAAATAGATATAAATTAGTGATGTTTTCAACAATAGAAAAACGGTTGAAAATAATTACAAATAGAACAAAATTTTAGTTTCTATTTGTGATTGTTGTATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTTCTATAAAACTAAAGATTAAAAGACTATTTGGACCTTGTACTTCGGAATTCATTTTAATTTAGTTTTTATTCTTTCAAGTGTCCAAACTTACCCCTCGTAATTTCAATAAATATTAGATCTGTTCCTTCAATGTTTTCAATTTCTTTTAAAAGAAAAATTAGAATAATATTTTTTATGTAAGAAAATATCATATGGGTGTGAACATGTTTTCAAAATGTGTAAAAATTATGCTAATAAAAATTAATATTTCTTTCGATAAAGTAACTAGATCTATTAAAAATATTTAAACTAAAATTGAATATTTAAAAATTCAGAATCTATAATAAAATAAAATTCAAAGTCATTTTAACCTAAATCAAAATTTCAAAACTTCATAGAAGAAACTTGTAATGGAAGCAATTTAAGTCGGTCTTATGGATGGAATGTTTGTTTGATGTGATGACAGATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTCCAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTGGAAGGTAA ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGATTCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCTCGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTCCAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTGGAAGGTAA ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGATTCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCTCGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTCCAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTGGAAGGTAA MEEIEQRVDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVGR
BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_004144598.1 (PREDICTED: ribonuclease 3-like protein 3 [Cucumis sativus] >KGN43500.1 hypothetical protein Csa_7G041940 [Cucumis sativus]) HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82 Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0
BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_022969213.1 (ribonuclease 3-like protein 3 [Cucurbita maxima]) HSP 1 Score: 293.1 bits (749), Expect = 6.4e-76 Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0
BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_023554575.1 (ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290.8 bits (743), Expect = 3.2e-75 Identity = 149/170 (87.65%), Postives = 159/170 (93.53%), Query Frame = 0
BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_022952611.1 (ribonuclease 3-like protein 3 [Cucurbita moschata]) HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74 Identity = 148/170 (87.06%), Postives = 158/170 (92.94%), Query Frame = 0
BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_022136054.1 (ribonuclease 3-like protein 3 [Momordica charantia]) HSP 1 Score: 267.7 bits (683), Expect = 2.9e-68 Identity = 131/153 (85.62%), Postives = 144/153 (94.12%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|A0A0A0K1J8|A0A0A0K1J8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041940 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82 Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|A0A1Q3BNT8|A0A1Q3BNT8_CEPFO (Ribonuclease_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13208 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51 Identity = 108/150 (72.00%), Postives = 124/150 (82.67%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|B9TA75|B9TA75_RICCO (Dicer-1, putative OS=Ricinus communis OX=3988 GN=RCOM_0139130 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.6e-51 Identity = 104/154 (67.53%), Postives = 128/154 (83.12%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|G7J6N8|G7J6N8_MEDTR (Ribonuclease III domain protein OS=Medicago truncatula OX=3880 GN=11427553 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 4.4e-49 Identity = 108/174 (62.07%), Postives = 129/174 (74.14%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|V4UEZ0|V4UEZ0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016164mg PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48 Identity = 109/171 (63.74%), Postives = 128/171 (74.85%), Query Frame = 0
BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q69KJ0|RTL3_ORYSJ (Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0358800 PE=2 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 6.1e-38 Identity = 76/142 (53.52%), Postives = 102/142 (71.83%), Query Frame = 0
BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q9LTQ0|RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31 Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 0
BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q9SP32|DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-29 Identity = 72/151 (47.68%), Postives = 91/151 (60.26%), Query Frame = 0
BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q6ATG6|RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2) HSP 1 Score: 125.2 bits (313), Expect = 7.5e-28 Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = 0
BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q8LMR2|DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 9.8e-28 Identity = 69/149 (46.31%), Postives = 91/149 (61.07%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TAIR10
Match: AT4G15417.1 (RNAse II-like 1) HSP 1 Score: 174.9 bits (442), Expect = 4.6e-44 Identity = 87/153 (56.86%), Postives = 111/153 (72.55%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TAIR10
Match: AT3G20420.1 (RNAse THREE-like protein 2) HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32 Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TAIR10
Match: AT1G01040.2 (dicer-like 1) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30 Identity = 72/151 (47.68%), Postives = 91/151 (60.26%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TAIR10
Match: AT5G45150.1 (RNAse THREE-like protein 3) HSP 1 Score: 114.4 bits (285), Expect = 7.3e-26 Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 0
BLAST of Cla97C02G028510 vs. TAIR10
Match: AT3G03300.1 (dicer-like 2) HSP 1 Score: 110.9 bits (276), Expect = 8.1e-25 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |