Cla97C02G028510 (gene) Watermelon (97103) v2

NameCla97C02G028510
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionendoribonuclease Dicer homolog 1-like
LocationCla97Chr02 : 2024747 .. 2028431 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGATTCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCTCGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAGTAAGTATCAGATTATATTTGTTTAATTTCTTCATCGTTCTCATCGATTACTCATTGACTTCCTTATTAATTCCTCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCGTAATTATCATCATTTAATTCTCATCCAATCCATCCATATGATCATTCTTTTCTCTTTAGTTTCCTAATTTTCTTTTACCTCTTAATCATAAACATTTGCTTTTAGGCTTCAACCACTATTTCATAGTTTTTGCATATATATTTTTTTTTTGATAAATTTTAAATTATAACAAAAAATATGTGATATATTTTTTGAAATCCATTAATAGAATGCTAATAAAGATAATTGGGTGTACTTACTCAAATTTGAATATACAGAAAAAAAGAAGTAGGATATTATTTTTTTTTATTTTTTATTTTTTTAAAGAAAAGAGACATAAAAAAATCAAATTTTACTTCAGGGGTGTAAAAAAACCTAATTAATGTGAAAGCCAACTTGAATTTGAAAACAAAAAGGGAAAAAAACAAATTAAAATTTTCATGGTTGACTTTTAAAAATTGTCTAATGAATTTTTTACATATTTAAAAATTGAAGTGGGAGGTTCTATGGGATAAAGTTTAGGAATATATAAAATAATGGTAAAAGTTTAAAATCAAAATTTAATTTAATTCAAATTTAAAATTTAAGATTTATATATAATTTAATCTAAGAGTTTTTATTTTATTTTATTTTATTGGTGTCTAGTATATTGAACTTTTTAGGTAACTATTCCTTTTAAATATGCTTTCCTCGTTTTTTTTCTTCTTTTGGCAAGGTACTTTTCCCATAATCACTTTCTCTAGACTTTTTGAGCTCTTTTAGATATAAAATTGATTAAAAAATTTGTCTTCTCTAACAAGATAAAAATAGAATTTTAGATAGATTCCTTGAATTAGAAATAAGATACTATAGGTGTGTAGAACAATCTATATTTGAGTTACATTCGCTATTATTTTTTAGAATAATCTAATTTTTATTATTTTAAATAATTATATAACATTTTAAATTAGAAATATAATTTAGACCGAAGAGATCCTTTTGAAAAATTATTTTTCTAATTTAAAACGCCATATAATTATTTACAATAATTAGAAAAAATAACTTCTTAAAAATTTGGGAATTAAAAATATATCTTCTGTAAACTTCGTAACCCCCATATTCTTTAAAGCTTGAAATAAAAAAGTAATTTTTCATTTTTAGTTCAACAGCATGTGGAGTTCACTATAGTTGATGTAAATTATAAATTAACGGAGAAGGCGTAAGATCCTGTGAAAATTAAATGTAGTAATTTATGGTGTGTTCCCACATTTATTATTATTATTTGAAATATTTGAATTTCTTAAATTAACTAAGAATGCATGAAAATTGAACGCAGTGTATGTCTTACCACTCCATTTATTCTTTCAAATCTTTTGCTTGCTCCCTAAGTTTTAAATGTTACCTATTTAGATTTTTAATTTAGTTTATAGGATTCAAAATGCCACAATTTTATATTTGAGAGTTGAGTTTTGTATCAATTTGATCCTTAAACAGACTAAATAGAAACTAAACTCACAACTTTTTTCCTATGTGTCTATTTCTTCCCTTACCTTTATTAAAACCAACCTAACATTATTCCTTATTGAATTAAAAATTCTCTTGAAATATAAAAATAATTGTAGAAACCTATGTTATGCCCGTAAAATTGGTATTATTAATTTCGAAGTCTGATGTTCAATTCACTACCTTACAATGTTGTAAAAAAATTCGAATTTATCTAAAATAACATCGAAAACAAAATATCATAAGTTATCAAGCAAAGTCTAAAAATTTAAAAATATGTTAAATCTCTTTTTGGTGAATAAATACTTAAATAGAGTGGGTTTTTCCTTTTTCTTCCTTTCTTCTTTGGGAATAAGATTATGTTATGAAAGTTAGCCCTCCCAAATACTATAACTTTGTTTGGCAAAAAGATTCCAATTCTAAATGATAGGTACAAAATGCTATAGAAGTCAAACATTTTAATTATTGCAATAAGTCTATAAATTTAACTTATATGTTACTAATTCTTTACGGCCATCAAAGGGTTGATGATAACATCAATGACGTGTGTGTGTGCATATATATATATATATATATATATATGATGTAGTTTTTTTTCTTTTGTTATTCTTATTTCTATCCACTTGAATTAAAATAGACTTTAAAACATATAGGATAGAAGATTATGTTAAAATATAAGCTTGTCTTTGTATTATCTTTAAACCTTAAAGAGTATATGATAGTAATAGTTTTTCAATCTTCAATTTTATATTTCAAATCTCTCTCTAACATTTCAAAATGTCTAATAAGCGTTGAGCTTTTTCTTTTGTCTACTAGATTCATAATAATTAAAAATTTTCTAACTAATTAATATCTTATTTATAAAATTAAATTTTATGTGTACATACAGGAATATAATTTAAACTTTAAATTAAAAAAATCTATCAAAAAATAAAAAATTTAAGTAACTATCAAACAAAATTTAATGTATAGGGACCAAAATAGATATAAATTAGTGATGTTTTCAACAATAGAAAAACGGTTGAAAATAATTACAAATAGAACAAAATTTTAGTTTCTATTTGTGATTGTTGTATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTTCTATAAAACTAAAGATTAAAAGACTATTTGGACCTTGTACTTCGGAATTCATTTTAATTTAGTTTTTATTCTTTCAAGTGTCCAAACTTACCCCTCGTAATTTCAATAAATATTAGATCTGTTCCTTCAATGTTTTCAATTTCTTTTAAAAGAAAAATTAGAATAATATTTTTTATGTAAGAAAATATCATATGGGTGTGAACATGTTTTCAAAATGTGTAAAAATTATGCTAATAAAAATTAATATTTCTTTCGATAAAGTAACTAGATCTATTAAAAATATTTAAACTAAAATTGAATATTTAAAAATTCAGAATCTATAATAAAATAAAATTCAAAGTCATTTTAACCTAAATCAAAATTTCAAAACTTCATAGAAGAAACTTGTAATGGAAGCAATTTAAGTCGGTCTTATGGATGGAATGTTTGTTTGATGTGATGACAGATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTCCAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTGGAAGGTAA

mRNA sequence

ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGATTCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCTCGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTCCAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTGGAAGGTAA

Coding sequence (CDS)

ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGATTCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCTCGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTCCAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTGGAAGGTAA

Protein sequence

MEEIEQRVDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVGR
BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_004144598.1 (PREDICTED: ribonuclease 3-like protein 3 [Cucumis sativus] >KGN43500.1 hypothetical protein Csa_7G041940 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0

Query: 1   MEEIEQRVDLLK-EEGS--SGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASY 60
           MEE ++RVD L+ ++GS   GGEAVNG DS ASLDGIEAILNYEFRDKRLLEEAFTDASY
Sbjct: 1   MEEGKKRVDFLEGKDGSRGGGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASY 60

Query: 61  SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG 120
           SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG
Sbjct: 61  SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG 120

Query: 121 FHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT 179
           FHRYLRHNK DLHQKIEEF +SIE+YPLHSNGMIKAPKVLADIVESTIGAVFADSN IDT
Sbjct: 121 FHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDT 180

BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_022969213.1 (ribonuclease 3-like protein 3 [Cucurbita maxima])

HSP 1 Score: 293.1 bits (749), Expect = 6.4e-76
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0

Query: 8   VDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFER 67
           VDLLK+EG        G  +AASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFER
Sbjct: 8   VDLLKQEGRV------GESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFER 67

Query: 68  LEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKP 127
           LEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 
Sbjct: 68  LEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKA 127

Query: 128 DLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTV 179
           DL QKIEEF+K+IE+YPLHSNGMIKAPK+LADIVES IGAVF DSNSIDTV
Sbjct: 128 DLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTV 172

BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_023554575.1 (ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.8 bits (743), Expect = 3.2e-75
Identity = 149/170 (87.65%), Postives = 159/170 (93.53%), Query Frame = 0

Query: 9   DLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 68
           DLL++EG  GGE+     +AASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERL
Sbjct: 9   DLLEQEG-RGGES-----TAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 68

Query: 69  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPD 128
           EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK D
Sbjct: 69  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 128

Query: 129 LHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTV 179
           L QKIEEF+K+IE+YPLHSNG+IKAPK+LADIVES IGAVF DSNSIDTV
Sbjct: 129 LDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTV 172

BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_022952611.1 (ribonuclease 3-like protein 3 [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 148/170 (87.06%), Postives = 158/170 (92.94%), Query Frame = 0

Query: 9   DLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 68
           DLLK+EG  GGE+     +AASLDG+EAIL YEFRDKRLLEEAFTDASYSPENCSSFERL
Sbjct: 9   DLLKQEG-RGGES-----TAASLDGMEAILKYEFRDKRLLEEAFTDASYSPENCSSFERL 68

Query: 69  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPD 128
           EYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK D
Sbjct: 69  EYVGDSVLNFLITREQYFSNPNLSPGTLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 128

Query: 129 LHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTV 179
           L QKIEEF+K+IE+YPLHSNG+IKAPK+LADIVES IGAVF DSNSIDTV
Sbjct: 129 LDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTV 172

BLAST of Cla97C02G028510 vs. NCBI nr
Match: XP_022136054.1 (ribonuclease 3-like protein 3 [Momordica charantia])

HSP 1 Score: 267.7 bits (683), Expect = 2.9e-68
Identity = 131/153 (85.62%), Postives = 144/153 (94.12%), Query Frame = 0

Query: 26  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 85
           +S  SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQY
Sbjct: 34  ESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQY 93

Query: 86  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPL 145
           FSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK DL +KIEEFA+ +++YPL
Sbjct: 94  FSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKIEEFAEGMKEYPL 153

Query: 146 HSNGMIKAPKVLADIVESTIGAVFADSNSIDTV 179
           HSNG+IKAPK+LADIVESTIGAVF DSNS+DTV
Sbjct: 154 HSNGLIKAPKILADIVESTIGAVFTDSNSMDTV 186

BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|A0A0A0K1J8|A0A0A0K1J8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041940 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0

Query: 1   MEEIEQRVDLLK-EEGS--SGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASY 60
           MEE ++RVD L+ ++GS   GGEAVNG DS ASLDGIEAILNYEFRDKRLLEEAFTDASY
Sbjct: 1   MEEGKKRVDFLEGKDGSRGGGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASY 60

Query: 61  SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG 120
           SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG
Sbjct: 61  SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHG 120

Query: 121 FHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT 179
           FHRYLRHNK DLHQKIEEF +SIE+YPLHSNGMIKAPKVLADIVESTIGAVFADSN IDT
Sbjct: 121 FHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDT 180

BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|A0A1Q3BNT8|A0A1Q3BNT8_CEPFO (Ribonuclease_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13208 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51
Identity = 108/150 (72.00%), Postives = 124/150 (82.67%), Query Frame = 0

Query: 31  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNP 90
           L+G+E IL Y+F +K LLEEAFT ASY SP+ C+S+ERLE+VGDSVLN L T+EQYF  P
Sbjct: 1   LEGVEEILGYKFGNKSLLEEAFTHASYTSPDQCASYERLEFVGDSVLNLLFTKEQYFLYP 60

Query: 91  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNG 150
           NL PG LTRLRAANVDTEKLARV+I HG HRYL H KP L Q+I+EF ++I DYPLHSNG
Sbjct: 61  NLQPGDLTRLRAANVDTEKLARVSIRHGLHRYLCHKKPLLEQQIQEFTQAILDYPLHSNG 120

Query: 151 MIKAPKVLADIVESTIGAVFADSN-SIDTV 179
           ++  PKVLADIVESTIGAVF DSN SID V
Sbjct: 121 LVDPPKVLADIVESTIGAVFIDSNLSIDIV 150

BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|B9TA75|B9TA75_RICCO (Dicer-1, putative OS=Ricinus communis OX=3988 GN=RCOM_0139130 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.6e-51
Identity = 104/154 (67.53%), Postives = 128/154 (83.12%), Query Frame = 0

Query: 26  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 85
           + + SLDG+E IL Y+F+++ LLEEAFTD+S+ P  C S+ERLE+VGDSVLN L T+E Y
Sbjct: 27  NQSPSLDGVEEILKYKFKNRSLLEEAFTDSSF-PGKCFSYERLEHVGDSVLNLLFTKEHY 86

Query: 86  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPL 145
           F  PNL PG+LTRLRAANVDTEKLARVA+ HGFHR+LRH KP L ++I EF+++I +YPL
Sbjct: 87  FKYPNLPPGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLLEEQIREFSQAILEYPL 146

Query: 146 HSNGMIKAPKVLADIVESTIGAVFADSN-SIDTV 179
           HSNG++  PKVLADIVES IGAVF DSN S+DTV
Sbjct: 147 HSNGLVDVPKVLADIVESAIGAVFIDSNSSVDTV 179

BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|G7J6N8|G7J6N8_MEDTR (Ribonuclease III domain protein OS=Medicago truncatula OX=3880 GN=11427553 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.4e-49
Identity = 108/174 (62.07%), Postives = 129/174 (74.14%), Query Frame = 0

Query: 6   QRVDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSF 65
           Q V  +KE+ +      N  DS   L  +EAIL YEF++K LLEEAFT  +Y  EN  S+
Sbjct: 204 QEVAHVKEDETDAETKEN--DSPPPLHEVEAILEYEFKNKLLLEEAFTHGTYGAENGLSY 263

Query: 66  ERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN 125
           ERLEYVGDSVLN +IT+EQ+ + P L+PG LTRLRAANVDTEKLARVAI HG HRYLRH 
Sbjct: 264 ERLEYVGDSVLNLMITKEQFQAYPTLAPGHLTRLRAANVDTEKLARVAIKHGLHRYLRHK 323

Query: 126 KPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFAD-SNSIDTV 179
           KP L  +I+EF K I +YPLHSNG+I  PK LADIVESTIGA+F D  +S++TV
Sbjct: 324 KPLLGDQIQEFTKGIAEYPLHSNGLIDVPKSLADIVESTIGAIFVDCGSSVETV 375

BLAST of Cla97C02G028510 vs. TrEMBL
Match: tr|V4UEZ0|V4UEZ0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016164mg PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 109/171 (63.74%), Postives = 128/171 (74.85%), Query Frame = 0

Query: 9   DLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 68
           DL   E +          +A +LD +E IL Y F +K LLEEAFTD S  PE   S+ERL
Sbjct: 17  DLFVNEKAGDESESESLPNANNLDEVEEILGYRFNNKNLLEEAFTDPS-CPERFFSYERL 76

Query: 69  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPD 128
           EYVGDSVLN L+T+EQ+F  PNL PGSLTRLR+ANV+TEKLARVAI  G H+YLRHNKP 
Sbjct: 77  EYVGDSVLNLLLTKEQFFLYPNLPPGSLTRLRSANVNTEKLARVAIKLGLHKYLRHNKPL 136

Query: 129 LHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTV 179
           L ++I EF+++I DYPLHSNG++ APKVLADIVESTIGAVF D N SID V
Sbjct: 137 LEEQIREFSEAILDYPLHSNGLVDAPKVLADIVESTIGAVFIDCNSSIDIV 186

BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q69KJ0|RTL3_ORYSJ (Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0358800 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.1e-38
Identity = 76/142 (53.52%), Postives = 102/142 (71.83%), Query Frame = 0

Query: 34  IEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNL 93
           +E++L YEFRDK L+EEA T  S  Y      ++ERLEY+GD+VL  +++RE + +   L
Sbjct: 42  VESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLTYGQL 101

Query: 94  SPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMI 153
            PG LTRLRAANVD EKLARVA+ HG H +LRH  P+L  +I +F + +  YP+HSNG++
Sbjct: 102 QPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMYPIHSNGLL 161

Query: 154 KAPKVLADIVESTIGAVFADSN 174
             PKVL D+VES IGA++ DSN
Sbjct: 162 DPPKVLCDVVESLIGAIYCDSN 183

BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q9LTQ0|RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31
Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 0

Query: 30  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 89
           S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSAIGLAISNYLYLTYP 118

Query: 90  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSI---EDYPLH 149
           +L P  L+ LRAANV TEKLARV++ HG + +LR N P L +K++EF++++   +D  + 
Sbjct: 119 SLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVS 178

Query: 150 SNGMIKAPKVLADIVESTIGAVFADSN 174
             G++KAPKVLAD+ ES  GAV+ D N
Sbjct: 179 YGGLVKAPKVLADLFESLAGAVYVDVN 203

BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q9SP32|DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-29
Identity = 72/151 (47.68%), Postives = 91/151 (60.26%), Query Frame = 0

Query: 33   GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 92
            G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L 
Sbjct: 1561 GLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLP 1620

Query: 93   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIE------DYPLH 152
            PG LT LRAA V+ E  ARVA+ H  H YLRH    L ++I EF K ++       +   
Sbjct: 1621 PGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSF 1680

Query: 153  SNGMIKAPKVLADIVESTIGAVFADSNSIDT 178
              G  KAPKVL DIVES  GA+F DS    T
Sbjct: 1681 GLGDCKAPKVLGDIVESIAGAIFLDSGKDTT 1711

BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q6ATG6|RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 7.5e-28
Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = 0

Query: 26  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 85
           D A +   +E +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y
Sbjct: 32  DRAEAAARVERLLRYQFRDGRLLEEALTHQSFA-DDAVSYQRLEFVGDSALGLAFSNFLY 91

Query: 86  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYP- 145
            +NP L PG L+ LRAAN+ TEKLARVA+ H  +  LR N P L   + +F ++++  P 
Sbjct: 92  LTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPE 151

Query: 146 ------LHSNGMIKAPKVLADIVESTIGAVFAD 172
                  +   ++KAPKVLADIVE+   AV+ D
Sbjct: 152 DDLSTVPYGGSVVKAPKVLADIVEAIAAAVYVD 183

BLAST of Cla97C02G028510 vs. Swiss-Prot
Match: sp|Q8LMR2|DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.8e-28
Identity = 69/149 (46.31%), Postives = 91/149 (61.07%), Query Frame = 0

Query: 30   SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 89
            + D ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  
Sbjct: 1537 NFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYT 1596

Query: 90   NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSN- 149
            +L PG LT LRAA V+ E  ARVA+ H  H +LRH    L  +I EF K +++  L    
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656

Query: 150  -----GMIKAPKVLADIVESTIGAVFADS 173
                 G  KAPKVL DIVES  GA+F DS
Sbjct: 1657 NSFGLGDCKAPKVLGDIVESIAGAIFLDS 1685

BLAST of Cla97C02G028510 vs. TAIR10
Match: AT4G15417.1 (RNAse II-like 1)

HSP 1 Score: 174.9 bits (442), Expect = 4.6e-44
Identity = 87/153 (56.86%), Postives = 111/153 (72.55%), Query Frame = 0

Query: 26  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 85
           D    ++ +E ILNY+F+DK LL +AFTDASY  +   S+E LE +GDS+LN  I  +  
Sbjct: 24  DQLMEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFI 83

Query: 86  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPL 145
              P  +PG LT+LRA NVDTEKLARVA+ H  + YLRH KP L ++I EF +++E YPL
Sbjct: 84  KLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYPL 143

Query: 146 HSNGMIKAPKVLADIVESTIGAVFADSNSIDTV 179
           HSNG++K PKVLADIVESTIGA+F D NS +TV
Sbjct: 144 HSNGLLKVPKVLADIVESTIGAIFMDCNSTETV 176

BLAST of Cla97C02G028510 vs. TAIR10
Match: AT3G20420.1 (RNAse THREE-like protein 2)

HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32
Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 0

Query: 30  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 89
           S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSAIGLAISNYLYLTYP 118

Query: 90  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSI---EDYPLH 149
           +L P  L+ LRAANV TEKLARV++ HG + +LR N P L +K++EF++++   +D  + 
Sbjct: 119 SLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVS 178

Query: 150 SNGMIKAPKVLADIVESTIGAVFADSN 174
             G++KAPKVLAD+ ES  GAV+ D N
Sbjct: 179 YGGLVKAPKVLADLFESLAGAVYVDVN 203

BLAST of Cla97C02G028510 vs. TAIR10
Match: AT1G01040.2 (dicer-like 1)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 72/151 (47.68%), Postives = 91/151 (60.26%), Query Frame = 0

Query: 33   GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 92
            G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L 
Sbjct: 1562 GLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLP 1621

Query: 93   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIE------DYPLH 152
            PG LT LRAA V+ E  ARVA+ H  H YLRH    L ++I EF K ++       +   
Sbjct: 1622 PGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSF 1681

Query: 153  SNGMIKAPKVLADIVESTIGAVFADSNSIDT 178
              G  KAPKVL DIVES  GA+F DS    T
Sbjct: 1682 GLGDCKAPKVLGDIVESIAGAIFLDSGKDTT 1712

BLAST of Cla97C02G028510 vs. TAIR10
Match: AT5G45150.1 (RNAse THREE-like protein 3)

HSP 1 Score: 114.4 bits (285), Expect = 7.3e-26
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 0

Query: 30  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 89
           S++ +E ILNY F +K LL+EA T  S        F+RLE+ GDS+L    T     + P
Sbjct: 3   SVEAVEKILNYSFVNKTLLKEAITQKS------PLFDRLEFFGDSILEVAFTNYICHTYP 62

Query: 90  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSI--EDYPLHS 149
           NL    L  LR ANV  EK AR+A+ H  H +L    P L +K++ FA+++  ED P+  
Sbjct: 63  NLKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPY 122

Query: 150 NGMIKAPKVLADIVESTIGAVFADSN 174
            G++KAPK+LAD +ES    VF D N
Sbjct: 123 GGLVKAPKILADTLESIAATVFIDVN 142

BLAST of Cla97C02G028510 vs. TAIR10
Match: AT3G03300.1 (dicer-like 2)

HSP 1 Score: 110.9 bits (276), Expect = 8.1e-25
Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 0

Query: 34   IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 93
            +E++LNY F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LS
Sbjct: 1152 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1211

Query: 94   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHS----N 153
            PG LT +R+A+V+ E  A VA+    H+++ +    LH+ I       E   L S     
Sbjct: 1212 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWE 1271

Query: 154  GMIKAPKVLADIVESTIGAVFADS 173
              I  PKVL D++ES  GA+F DS
Sbjct: 1272 SDISFPKVLGDVIESLAGAIFVDS 1295

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004144598.12.7e-8290.06PREDICTED: ribonuclease 3-like protein 3 [Cucumis sativus] >KGN43500.1 hypotheti... [more]
XP_022969213.16.4e-7687.72ribonuclease 3-like protein 3 [Cucurbita maxima][more]
XP_023554575.13.2e-7587.65ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo][more]
XP_022952611.11.2e-7487.06ribonuclease 3-like protein 3 [Cucurbita moschata][more]
XP_022136054.12.9e-6885.62ribonuclease 3-like protein 3 [Momordica charantia][more]
Match NameE-valueIdentityDescription
tr|A0A0A0K1J8|A0A0A0K1J8_CUCSA1.8e-8290.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041940 PE=4 SV=1[more]
tr|A0A1Q3BNT8|A0A1Q3BNT8_CEPFO1.2e-5172.00Ribonuclease_3 domain-containing protein (Fragment) OS=Cephalotus follicularis O... [more]
tr|B9TA75|B9TA75_RICCO1.6e-5167.53Dicer-1, putative OS=Ricinus communis OX=3988 GN=RCOM_0139130 PE=4 SV=1[more]
tr|G7J6N8|G7J6N8_MEDTR4.4e-4962.07Ribonuclease III domain protein OS=Medicago truncatula OX=3880 GN=11427553 PE=4 ... [more]
tr|V4UEZ0|V4UEZ0_9ROSI1.7e-4863.74Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016164mg PE=4 ... [more]
Match NameE-valueIdentityDescription
sp|Q69KJ0|RTL3_ORYSJ6.1e-3853.52Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0... [more]
sp|Q9LTQ0|RTL2_ARATH3.3e-3146.26Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1[more]
sp|Q9SP32|DCL1_ARATH2.3e-2947.68Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV... [more]
sp|Q6ATG6|RTL2_ORYSJ7.5e-2843.79Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0... [more]
sp|Q8LMR2|DCL1_ORYSJ9.8e-2846.31Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL... [more]
Match NameE-valueIdentityDescription
AT4G15417.14.6e-4456.86RNAse II-like 1[more]
AT3G20420.11.8e-3246.26RNAse THREE-like protein 2[more]
AT1G01040.21.3e-3047.68dicer-like 1[more]
AT5G45150.17.3e-2642.47RNAse THREE-like protein 3[more]
AT3G03300.18.1e-2543.06dicer-like 2[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR036389RNase_III_sf
IPR000999RNase_III_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006396 RNA processing
biological_process GO:0016075 rRNA catabolic process
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0016442 RISC complex
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G028510.1Cla97C02G028510.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 46..177
e-value: 1.5E-19
score: 80.9
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 66..172
e-value: 1.9E-22
score: 79.8
IPR000999Ribonuclease III domainPROSITEPS00517RNASE_3_1coord: 66..74
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 31..173
score: 33.778
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 46..173
e-value: 1.81408E-34
score: 118.869
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3DG3DSA:1.10.1520.10coord: 26..180
e-value: 2.6E-47
score: 162.9
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILYSSF69065RNase III domain-likecoord: 31..177
NoneNo IPR availablePANTHERPTHR14950:SF35RIBONUCLEASE 3-LIKE PROTEIN 2-RELATEDcoord: 27..174
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 27..174

The following gene(s) are paralogous to this gene:

None