CmaCh19G004200 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCAGATGTTCAATGTTGTCCACGAATAACGGTGACCCTTGATTAAAAACCTTTAGGTTGGTAACAAAAAGCTGCTGCCCTTTTCCTCTCTCATTCTCCTCAGTCTCTCTCTCTCTCTCTCTCTTCTCCCCCTCTGCCATGGCTCTGCAAGTCTGGGAGACGTTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCGTCGACCTTCTTCACAGTCTTGGCTCTTGGATTGGCCTTTTACTATCTCATTTCCAGTTTCTTCGGTCCCTCCGACTACGGAACACATACTAGGGACTTAGGGGAGCAGCTACAGCCTCTCCCTCCGCCTGTCCAAATCGGTGAGGTTTCTGAGGATGAGTTGAAGCAATACGATGGCTCCGATCCTGAGAAGCCTCTGCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCTCAGAGCAGGTCGGTTGAGAATTTTCTTTTATTGAAAAATTTCCTCTCTGTTTTAGCTATTTAGTGTTTGGATGATCGTGATGTGTTTTGGTTCAGTTTCAATTAGTTCTTGTGTCAACGTCTTTGTTGAATTTCGTGATGGTAGGTGGAATGTTAGCCGGTTTTAGGTTTACAAAAGCTTTTTATATTTTATTTCAGTTTTTTGAAGTAATTGATTTTGTGCTTCGTTTTGCCTTCTACATCTCTCCTTCTCGTTCAAAGAGCTACTGATTCCTGCAAAATGAAACTTAATTTGATTCTACTGCATTGAACCGCATCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGCTATTTCTAATTCGTCTTCTCTTCATGTTTCTTTTTCTAAGTCATTCATTGTCCACTATGCATCCCCTATCTTTTATGGTGTTCTATGTTTGTCATAATATATGCTAGGACCAAAGAAGAACTTACTGATTTTTTGAGTTCTGGACTTCAATTCAATCTTTTAATTTTTTTCGTGTTGGACCAGAAAACCTCTCAAAATAGATTGGTGAAATTAATCTTCTTGTTTTTGTGCATCTGACTTTTAATTTTGATATTTATTGTTCCTTCTTATAGCTGTAATTTGCTACATATCTGGTTTTGAAAATATTTAATTGGGACTGTCATTTTTTGCTTTCAAGTTACGGCCATGGTATTTCCAGCATATAGAATTCGTATAGCATATGGAGTTCACAAAGGCAAGAGTTTGATGTTTCACGAGTTATTGTGAAAACTTGGCTTGTAAAGGGACCATAGAGACCGATTCTTCTTGTGGGGCTGAAGAAGGTTCTGTTAAATGTAAAATTACTTTTAAACGAGCTAATGATTTCAAATCACTTTTTACAAACTTATGATTTGAAAGAGAATAAGTTTAAGAGAAAACAATGTAGAAAGTAGTTCTCATTATGCGCTAACAATTAGAAAGTTGCTTTTCAAAAGACTTTATAAGAACATGTCCTTTGTTTCGTGGTTAGGGTATACTTTTGAACCATTCTTTGCATGATGTGTTTGTTGGAAATGGCCCATGATCTAAATATGTCAAAACAAATAAAGGGAGCAAAAGAGGAGAGAGCTTTGGTACAAGGAACCTTAATCACTTAGCTTTTCAATTTTCTTTGTTGTTGGGAAATAAACATACATCTCACGAGTATTTAGAGTGGAGAAGGCACTAATTTGCTTCCTAAACTTTCTCCTCACACTAACAATCTTCCTAGATAAATCATAAAACTTTGGTCCACAATTTTGCTGATTTATTTTGATTAAGCTTCCTTCCTATTAATCTGGAAGTTCTTCTCCGATACAAAGAAATCATTCCGTTCCAAAGCCAAAGATCGTAATTCTCGAACGAGCAATTGAAAAGATTTTGGAGTATCCTCAGATTTAGTTATTGTTCCTCCAATGATTGTCGTACCACTACCAATTCTCCTATATTGGTCCATAAGTTAGTAACTTATCCTCTACTAAATCCACTAACAATTCTCTTAAAGTTACTCCATAAGTTGGTGACTTAATTCTACTAAGTCAAGTATATATGCTCACAGTGTTATTTACTACACTAAGGTTGTAGAAACGAAGATCTGTTTATTTTTAGTGACTTATTCTACTAAGTCAAGTTTATAAACTCACAGTGTTATTTACTACCCTAAGGTTGTGGACACGAAGATTTGTTTATGTCTCCTGTTTCTTTTCCGTGTCTTGTTCTCTTGTGTGTGCGTACTCGTAAAGGAAAACTAAAATTGAAGAAAATATACGCCTATATATATTGCTCCAATTTTGACACTCCTTGGTTGCAGGATGTTCTATGGACCTGGAGGGCCGTATGCCCTTTTTGCTGGAAAGGATGCCAGCAGAGCTCTTGCAAAAATGTCATTTGAAGAGAAAGATCTGACAGGGGATATCTCTGGTCTTGGGCCATTTGAACTGGAAGCCTTACAGGACTGGGAATACAAATTCATGAGTAAATATGTTAAAGTTGGGACAATCAAGAAGCCAGTTGCTGAAGGTGATGCTGCGCCGGCTGCTGGTGAGCCTGCAGAATCAAGCACAGCAGAAGTTAGCAGCAGCAAGCCTGCTGAAGACAGTCCCTCGGAATCTCATGCTGATAAAGCCGCCGAGGAAACCCCTGCTGCTGCGAAAAACGTTGAATAATATTTTTGTGGGTGGAGAACGATGTGTACGTGTGGTCATGTTTCAGTAATCTTGTTTTATAGATAAGTGAAGTGTAGCTGTGTAGGAAGATATTACAGGTGGAGTTAAGACTTAGAGTTTATGTTACTCTTGTTCAACAAACATCTGATAATAAGACAAGTCTTTGAATTTGGAAATAGGACTCAGGTCTCTCTTTCCCCAATTTGTTTGACCTAATTGGATTGAAACTGAAAGTATGAACTAATGAATAACAATAAATAGGGGATTAGCAATTCCATTGGGTTTGAGGC CGCAGATGTTCAATGTTGTCCACGAATAACGGTGACCCTTGATTAAAAACCTTTAGGTTGGTAACAAAAAGCTGCTGCCCTTTTCCTCTCTCATTCTCCTCAGTCTCTCTCTCTCTCTCTCTCTTCTCCCCCTCTGCCATGGCTCTGCAAGTCTGGGAGACGTTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCGTCGACCTTCTTCACAGTCTTGGCTCTTGGATTGGCCTTTTACTATCTCATTTCCAGTTTCTTCGGTCCCTCCGACTACGGAACACATACTAGGGACTTAGGGGAGCAGCTACAGCCTCTCCCTCCGCCTGTCCAAATCGGTGAGGTTTCTGAGGATGAGTTGAAGCAATACGATGGCTCCGATCCTGAGAAGCCTCTGCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCTCAGAGCAGGATGTTCTATGGACCTGGAGGGCCGTATGCCCTTTTTGCTGGAAAGGATGCCAGCAGAGCTCTTGCAAAAATGTCATTTGAAGAGAAAGATCTGACAGGGGATATCTCTGGTCTTGGGCCATTTGAACTGGAAGCCTTACAGGACTGGGAATACAAATTCATGAGTAAATATGTTAAAGTTGGGACAATCAAGAAGCCAGTTGCTGAAGGTGATGCTGCGCCGGCTGCTGGTGAGCCTGCAGAATCAAGCACAGCAGAAGTTAGCAGCAGCAAGCCTGCTGAAGACAGTCCCTCGGAATCTCATGCTGATAAAGCCGCCGAGGAAACCCCTGCTGCTGCGAAAAACGTTGAATAATATTTTTGTGGGTGGAGAACGATGTGTACGTGTGGTCATGTTTCAGTAATCTTGTTTTATAGATAAGTGAAGTGTAGCTGTGTAGGAAGATATTACAGGTGGAGTTAAGACTTAGAGTTTATGTTACTCTTGTTCAACAAACATCTGATAATAAGACAAGTCTTTGAATTTGGAAATAGGACTCAGGTCTCTCTTTCCCCAATTTGTTTGACCTAATTGGATTGAAACTGAAAGTATGAACTAATGAATAACAATAAATAGGGGATTAGCAATTCCATTGGGTTTGAGGC ATGGCTCTGCAAGTCTGGGAGACGTTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCGTCGACCTTCTTCACAGTCTTGGCTCTTGGATTGGCCTTTTACTATCTCATTTCCAGTTTCTTCGGTCCCTCCGACTACGGAACACATACTAGGGACTTAGGGGAGCAGCTACAGCCTCTCCCTCCGCCTGTCCAAATCGGTGAGGTTTCTGAGGATGAGTTGAAGCAATACGATGGCTCCGATCCTGAGAAGCCTCTGCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCTCAGAGCAGGATGTTCTATGGACCTGGAGGGCCGTATGCCCTTTTTGCTGGAAAGGATGCCAGCAGAGCTCTTGCAAAAATGTCATTTGAAGAGAAAGATCTGACAGGGGATATCTCTGGTCTTGGGCCATTTGAACTGGAAGCCTTACAGGACTGGGAATACAAATTCATGAGTAAATATGTTAAAGTTGGGACAATCAAGAAGCCAGTTGCTGAAGGTGATGCTGCGCCGGCTGCTGGTGAGCCTGCAGAATCAAGCACAGCAGAAGTTAGCAGCAGCAAGCCTGCTGAAGACAGTCCCTCGGAATCTCATGCTGATAAAGCCGCCGAGGAAACCCCTGCTGCTGCGAAAAACGTTGAATAA MALQVWETLKEAIVAYTGLSPSTFFTVLALGLAFYYLISSFFGPSDYGTHTRDLGEQLQPLPPPVQIGEVSEDELKQYDGSDPEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGTIKKPVAEGDAAPAAGEPAESSTAEVSSSKPAEDSPSESHADKAAEETPAAAKNVE
BLAST of CmaCh19G004200 vs. Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.3e-68 Identity = 142/221 (64.25%), Postives = 164/221 (74.21%), Query Frame = 1
BLAST of CmaCh19G004200 vs. Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 246.5 bits (628), Expect = 2.7e-64 Identity = 136/218 (62.39%), Postives = 162/218 (74.31%), Query Frame = 1
BLAST of CmaCh19G004200 vs. Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.7e-23 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 1
BLAST of CmaCh19G004200 vs. Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = 1
BLAST of CmaCh19G004200 vs. Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18 Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TrEMBL
Match: A0A0A0LIG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G915110 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 6.8e-91 Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TrEMBL
Match: A0A067JHP0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26129 PE=3 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 3.4e-82 Identity = 167/216 (77.31%), Postives = 184/216 (85.19%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TrEMBL
Match: B9R9D3_RICCO (Steroid binding protein, putative OS=Ricinus communis GN=RCOM_1496460 PE=3 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80 Identity = 164/220 (74.55%), Postives = 180/220 (81.82%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TrEMBL
Match: A0A058ZX73_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00245 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79 Identity = 163/219 (74.43%), Postives = 186/219 (84.93%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TrEMBL
Match: A9P9Z4_POPTR (Cytochrome b5 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0015s13500g PE=2 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.9e-77 Identity = 163/220 (74.09%), Postives = 179/220 (81.36%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TAIR10
Match: AT3G48890.1 (AT3G48890.1 membrane-associated progesterone binding protein 3) HSP 1 Score: 260.0 bits (663), Expect = 1.3e-69 Identity = 142/221 (64.25%), Postives = 164/221 (74.21%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TAIR10
Match: AT5G52240.1 (AT5G52240.1 membrane steroid binding protein 1) HSP 1 Score: 246.5 bits (628), Expect = 1.5e-65 Identity = 136/218 (62.39%), Postives = 162/218 (74.31%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TAIR10
Match: AT2G24940.1 (AT2G24940.1 membrane-associated progesterone binding protein 2) HSP 1 Score: 108.6 bits (270), Expect = 4.9e-24 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 1
BLAST of CmaCh19G004200 vs. TAIR10
Match: AT4G14965.1 (AT4G14965.1 membrane-associated progesterone binding protein 4) HSP 1 Score: 68.9 bits (167), Expect = 4.3e-12 Identity = 42/138 (30.43%), Postives = 68/138 (49.28%), Query Frame = 1
BLAST of CmaCh19G004200 vs. NCBI nr
Match: gi|449461239|ref|XP_004148349.1| (PREDICTED: membrane steroid-binding protein 2 [Cucumis sativus]) HSP 1 Score: 341.7 bits (875), Expect = 9.8e-91 Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 1
BLAST of CmaCh19G004200 vs. NCBI nr
Match: gi|659131801|ref|XP_008465863.1| (PREDICTED: membrane steroid-binding protein 2 [Cucumis melo]) HSP 1 Score: 336.7 bits (862), Expect = 3.1e-89 Identity = 184/216 (85.19%), Postives = 193/216 (89.35%), Query Frame = 1
BLAST of CmaCh19G004200 vs. NCBI nr
Match: gi|802769150|ref|XP_012090276.1| (PREDICTED: membrane steroid-binding protein 2-like [Jatropha curcas]) HSP 1 Score: 312.8 bits (800), Expect = 4.9e-82 Identity = 167/216 (77.31%), Postives = 184/216 (85.19%), Query Frame = 1
BLAST of CmaCh19G004200 vs. NCBI nr
Match: gi|255539487|ref|XP_002510808.1| (PREDICTED: membrane steroid-binding protein 1 [Ricinus communis]) HSP 1 Score: 307.8 bits (787), Expect = 1.6e-80 Identity = 164/220 (74.55%), Postives = 180/220 (81.82%), Query Frame = 1
BLAST of CmaCh19G004200 vs. NCBI nr
Match: gi|702488501|ref|XP_010035120.1| (PREDICTED: membrane steroid-binding protein 2 [Eucalyptus grandis]) HSP 1 Score: 303.9 bits (777), Expect = 2.3e-79 Identity = 163/219 (74.43%), Postives = 186/219 (84.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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