Carg08418 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTGCAAGTCTGGGAAACGTTGAAGGAGGCAATCGTGGCATACACAGGCCTATCTCCGTCGACCTTCTTCACTGCCGTCGCTTTTGGCCTTGCCTTTTACTTTCTCATTTCCAGTTTATTCGCTCCCTCCGACAACAGAACCCACACTAGGGACTTGGGGGAGCAGCTCCAGCCTCTCCCTCCGCCTGTCCAAGTCGGTGAGATTTCCGAGGAGGAGTTGAAGCAATACGATGGCTCCGATTCTGAGAAGCCTCTGCTTATGGCTATCAAGGGCCAGATCTATGATGTTTCTCAGAGCAGGTCTGTTGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTCCAAATTTTTTTTCTCTGTTTTGAGTAATTAGTGTTTGGATAATCGTGATTAGTTTTGATTCGGTTTCAGTTTGTTTTTGAGTCAACGTGTTTGTTGAATTCTGTGATGGTATGTGGAATGAGTTGTAGGTCAGCAGGTTTTAGGTTTAATTAATCTGATGCTTTCGTTTTTACCAATACAGCTCTACTTTCGTACAAATTTCTACTGTTTTCTGAAATTTGATCCTGCTGTATTGAACCGCTATCGAAGATTTTTAGGCTATTTCCAATTCGTTTTCTTTTCCTTGCTGTTCTCCATTGTCCATTTGATGCAAATTACTGTGAAATAAGAATATTGATAGTTTTTGTACACTTTGTGCTTCTTTCTTGGTGGTCGATTTGATTTCGATAGATGTTGTGAATTCTTGTACTGAACTGCTTAGGCTCTTATCTTTTATAGTGTTCTATGCTTGTCAGATCATAGTTCTGAAAACCAACTAGGAAACATCTACATTTTTGTTGTTTCTGTTCTTCAATCCAAACTTTTTATCACTATTATGGTGGTGCAGAAAACCTCTCCTAGTAGATTGATGAGTTTAAACATGTTCTTCTTCTGAATTTGAACTTTGCTGCTTCTTTTTTCCTTCTTATAGCTGTAATTTTCTATGTATCTAGCTTTGAAAATATTTGCTTTTGACTGTTGCTTTTGCCATTCAATTACAGTTTAAGGCCTATTCTGGGTGTGTTTGTAAAGGGCCCGAGGCCAATTCTCCTTTCATTTGTTGGGGAATGTTTATACATGCTCATGATTTCAAAGAGAGAATAAGTTGAACAGAACACAATGTGCTAAAAAGCAGAAAGTTGCTTTCCCAAAAGCTTAATAAAAACAGGCCCTTGTTTCATGGATATTCGGTGGCTATCTGTTTCCATGGTGGTTTCTTTCTTATTATGTACGATTTACTACGCTGAGGCTGTAGAAGTGATTATCCGATTCGTTGCAGCGTCTTGGAGATAACTGCATTTGTATAATTCGCTTTCATTTTCTGTATTTCTCTCAATCATGCTGTTCTGTTGTTTCAATTTATCTTCTAACCCATTTTTTCTTTTAGGATGTTCTATGGACCTGGGGGACCCTATGCCCTTTTTGCTGGAAAGGATGCAAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAGAAAGATCTGACTGGGGATATCTCTGGTCTCGGTCCGTTCGAACTTGACGCCTTGCAGGACTGGGAATACAAATTCATGAGCAAATACGTCAAAGTTGGGACAGTCAAGAAGCAAGTTGCCGAAGGCGGCGATGCTGCACCTGCCATGGTCGAACCTGCAGAATCAAGCACTGCTGAAGTTAGCAAACCTGCTGAAGAAGAACGCCCCTCAGAATCTCGAGCTGATAAAGCTAAAGAAACCCCTGCTTCTGCCAATGTTGAATAA ATGGCTCTGCAAGTCTGGGAAACGTTGAAGGAGGCAATCGTGGCATACACAGGCCTATCTCCGTCGACCTTCTTCACTGCCGTCGCTTTTGGCCTTGCCTTTTACTTTCTCATTTCCAGTTTATTCGCTCCCTCCGACAACAGAACCCACACTAGGGACTTGGGGGAGCAGCTCCAGCCTCTCCCTCCGCCTGTCCAAGTCGGTGAGATTTCCGAGGAGGAGTTGAAGCAATACGATGGCTCCGATTCTGAGAAGCCTCTGCTTATGGCTATCAAGGGCCAGATCTATGATGTTTCTCAGAGCAGGATGTTCTATGGACCTGGGGGACCCTATGCCCTTTTTGCTGGAAAGGATGCAAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAGAAAGATCTGACTGGGGATATCTCTGGTCTCGGTCCGTTCGAACTTGACGCCTTGCAGGACTGGGAATACAAATTCATGAGCAAATACGTCAAAGTTGGGACAGTCAAGAAGCAAGTTGCCGAAGGCGGCGATGCTGCACCTGCCATGGTCGAACCTGCAGAATCAAGCACTGCTGAAGTTAGCAAACCTGCTGAAGAAGAACGCCCCTCAGAATCTCGAGCTGATAAAGCTAAAGAAACCCCTGCTTCTGCCAATGTTGAATAA ATGGCTCTGCAAGTCTGGGAAACGTTGAAGGAGGCAATCGTGGCATACACAGGCCTATCTCCGTCGACCTTCTTCACTGCCGTCGCTTTTGGCCTTGCCTTTTACTTTCTCATTTCCAGTTTATTCGCTCCCTCCGACAACAGAACCCACACTAGGGACTTGGGGGAGCAGCTCCAGCCTCTCCCTCCGCCTGTCCAAGTCGGTGAGATTTCCGAGGAGGAGTTGAAGCAATACGATGGCTCCGATTCTGAGAAGCCTCTGCTTATGGCTATCAAGGGCCAGATCTATGATGTTTCTCAGAGCAGGATGTTCTATGGACCTGGGGGACCCTATGCCCTTTTTGCTGGAAAGGATGCAAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAGAAAGATCTGACTGGGGATATCTCTGGTCTCGGTCCGTTCGAACTTGACGCCTTGCAGGACTGGGAATACAAATTCATGAGCAAATACGTCAAAGTTGGGACAGTCAAGAAGCAAGTTGCCGAAGGCGGCGATGCTGCACCTGCCATGGTCGAACCTGCAGAATCAAGCACTGCTGAAGTTAGCAAACCTGCTGAAGAAGAACGCCCCTCAGAATCTCGAGCTGATAAAGCTAAAGAAACCCCTGCTTCTGCCAATGTTGAATAA MALQVWETLKEAIVAYTGLSPSTFFTAVAFGLAFYFLISSLFAPSDNRTHTRDLGEQLQPLPPPVQVGEISEEELKQYDGSDSEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELDALQDWEYKFMSKYVKVGTVKKQVAEGGDAAPAMVEPAESSTAEVSKPAEEERPSESRADKAKETPASANVE
BLAST of Carg08418 vs. NCBI nr
Match: XP_022957722.1 (membrane steroid-binding protein 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 408.7 bits (1049), Expect = 1.3e-110 Identity = 211/217 (97.24%), Postives = 215/217 (99.08%), Query Frame = 0
BLAST of Carg08418 vs. NCBI nr
Match: XP_022995193.1 (membrane steroid-binding protein 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 403.7 bits (1036), Expect = 4.0e-109 Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 0
BLAST of Carg08418 vs. NCBI nr
Match: XP_022957724.1 (membrane steroid-binding protein 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 380.9 bits (977), Expect = 2.8e-102 Identity = 200/217 (92.17%), Postives = 203/217 (93.55%), Query Frame = 0
BLAST of Carg08418 vs. NCBI nr
Match: XP_022995194.1 (membrane steroid-binding protein 2-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 374.4 bits (960), Expect = 2.6e-100 Identity = 197/217 (90.78%), Postives = 199/217 (91.71%), Query Frame = 0
BLAST of Carg08418 vs. NCBI nr
Match: XP_023534575.1 (membrane steroid-binding protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374.4 bits (960), Expect = 2.6e-100 Identity = 196/217 (90.32%), Postives = 201/217 (92.63%), Query Frame = 0
BLAST of Carg08418 vs. TAIR10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3) HSP 1 Score: 261.5 bits (667), Expect = 4.5e-70 Identity = 132/189 (69.84%), Postives = 157/189 (83.07%), Query Frame = 0
BLAST of Carg08418 vs. TAIR10
Match: AT5G52240.1 (membrane steroid binding protein 1) HSP 1 Score: 247.3 bits (630), Expect = 8.8e-66 Identity = 143/225 (63.56%), Postives = 161/225 (71.56%), Query Frame = 0
BLAST of Carg08418 vs. TAIR10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24 Identity = 50/97 (51.55%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Carg08418 vs. TAIR10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13 Identity = 48/180 (26.67%), Postives = 87/180 (48.33%), Query Frame = 0
BLAST of Carg08418 vs. Swiss-Prot
Match: sp|Q9M2Z4|MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 8.1e-69 Identity = 132/189 (69.84%), Postives = 157/189 (83.07%), Query Frame = 0
BLAST of Carg08418 vs. Swiss-Prot
Match: sp|Q9XFM6|MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2) HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64 Identity = 143/225 (63.56%), Postives = 161/225 (71.56%), Query Frame = 0
BLAST of Carg08418 vs. Swiss-Prot
Match: sp|Q9FVZ7|MSBP1_ORYSJ (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.4e-60 Identity = 132/211 (62.56%), Postives = 153/211 (72.51%), Query Frame = 0
BLAST of Carg08418 vs. Swiss-Prot
Match: sp|Q9FVZ9|MSBP2_ORYSJ (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.7e-47 Identity = 96/121 (79.34%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of Carg08418 vs. Swiss-Prot
Match: sp|Q9SK39|SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.3e-23 Identity = 50/97 (51.55%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Carg08418 vs. TrEMBL
Match: tr|A0A0A0LIG2|A0A0A0LIG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915110 PE=3 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.9e-86 Identity = 176/217 (81.11%), Postives = 190/217 (87.56%), Query Frame = 0
BLAST of Carg08418 vs. TrEMBL
Match: tr|A0A1S3CQ79|A0A1S3CQ79_CUCME (membrane steroid-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103503452 PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 2.7e-85 Identity = 177/218 (81.19%), Postives = 190/218 (87.16%), Query Frame = 0
BLAST of Carg08418 vs. TrEMBL
Match: tr|A0A2C9VQV2|A0A2C9VQV2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G146300 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 5.4e-78 Identity = 160/213 (75.12%), Postives = 177/213 (83.10%), Query Frame = 0
BLAST of Carg08418 vs. TrEMBL
Match: tr|A0A067JHP0|A0A067JHP0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26129 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 5.1e-76 Identity = 149/196 (76.02%), Postives = 171/196 (87.24%), Query Frame = 0
BLAST of Carg08418 vs. TrEMBL
Match: tr|A0A2P4HX75|A0A2P4HX75_QUESU (Membrane steroid-binding protein 2 OS=Quercus suber OX=58331 GN=CFP56_31313 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.1e-75 Identity = 158/217 (72.81%), Postives = 178/217 (82.03%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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