CmaCh19G000140 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G000140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Beta-carotene isomerase D27, chloroplastic
Location	Cma_Chr19 : 83796 .. 89933 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCCTTCACTCTAAAAATACAAGAAAAACGCCCTTCAGTCTCAAGAGAAAGAAATGGAAGTAAGAGTTGGTGAGGAAAGGAGAGTGATTTTGGGAAGTGGGACAAACGTGAGGAGAAGCAACAAAACGAAGAAGATGAGAAGAAAAAGCATTGCCTGTGTAGCAGTGCTTACAAGAGCAGCAGAGAGTGGAGCAACAGAAGAAACAAGAAAACCAAACACTGTTTATACAGACAACTGGTTTGAGAAAATAGCCATCCACCATGTATCTCAGGCAGTACAAGCAACCTCAGGTGATCTCTTTTCTTTTCTTTTCTTTTTGTTTGAAGATTTGGAATACAGAATTAATTATGATGTATATTCAGGTTGGAGAAGCAAGAAGAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAACTACAACCAGATCAAACAAAGAGAGGTTATCATTCAAGCGCTTGGAAGAGCATTTCCAGCCCCAATCCTCTCTTTGGTAAATTTCATTCATTCATTCATTCAATATCATTTACTATTCTTTTGACTTTCAATGTACTTGTGATATAAATGCATATCATGCATATATGTAAAATACTATCACCAAACATATCGTTAAAGATTTTACCGATACCAATTTCAAGCCTACAATCATTTTTACTTTCATCACTCCCTCAAATATTATTGCTAAAAGTAATTTCAAAAGTCATACATTTATTTTTCTAGGCGGCTCTAAGTTATTTATTTACCTATGATATTAGATGATACAAGCAATAAATGTTTCCACATCAATAGAAGTTCATTATTAAATAACATTTGTAGGGTAAGTAGTGCATGATCATTTGATGAATTTCATTTAGGCCAAATTTCAATACTTTGTCTTCCTTATTTGGTCTCCTTTCTTCTTCCCATTTGTTTGTTTAAGTATTGACATAATTAAGTTTTTTACCATAACCTATAAGCTAAAACTTCTAAGTTGATTGTGGAATCAGAGCATGAGGTTATCTGTCCTGTGTTTGCACCCTATAATATAATTTTCTGATTTCCAACTTAAAATCGTAGGATCCAACACATTTTGGGGGATATAGCTAGGTTTCATTGCCTAGGTTAGAACCTACCTAGAACTATACCCTTTTCTTATTTTTCTTTCCATTAATCATGGGGTATAATAGTTATTTGATTGGCATGTCATTATATGGAAATAGTATCAGCAAATGACTCACATTTTATATTATATTTCTAATTATCAGCAATTATTCGATTAAAGAAGTATTAAAACTGTACTTTTACTATTCTTGATCCATTTCCAATTTCGCCTTTTACTATTAAAACCCCACCCCTCTCAATCGTATGTCCCTAACAAATATAGTGGTGAACAAAGTGCAGATAAGAACATTGCTACCTCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTAAGATGATGTAAATAAATTTAGCCAAGGACATAATTGGGAATTAACATCAATCCATGGACATAATTGGGAATTAACAGCTGCTTGTATACATATACAAATACCCATGAGGCCAACCTCAGTACACCTTTAACCAAAAGCATATATCATCGACCTTGGTTAAAGCATATATCATCGACCAAAAAGTCAAAAGATCGAATTCCTACTCCAAAGAGATAATTCTATCATAGGGCTTAAGATCGATGTCAAATTTTTTTCCAGAATATAGAGTATTTAAACAAACAAACAAGGTCAGAATAAAGATAGATTCCAGCTAATGGTGGACACAAGAACTTCAACTTTAGCACTAAATTCAATATAATAATATGATTTTCAATGGCCAAGTTGATAAACCTGCAGTGTTTGAGGCACTAGTCCCTTCTAGACTTGTCCTGTCCCTACAAATGAAAGAAAGGTTTTGTGACGTTAGATAGATAAACCTATTTTTTAAGAAACTATCTTCTCTTCATGCTTACTCCCTTTGGCCCTTTCACTTTCTAGGCATTCCTTAAGAAGTCAGATTAAACACAATTGATATGTCTAGTTTGTTGGGGAGGGAGTGATAGAAAAGATTTTTAAGCGAAACAACTAAACAATGCAGGAGCCATTCCCTACGCACACACAAATGGAAGAAGCAAGTCTCCTTCTCAATTACTAATTCGCAACACTGACAATAGTAACATATGATTCTTACAGGTGAAGGAATCAGACTTCAAAGGAAAAAAAGAAAAAAATGTGGTTCAAATCCACAAGTGCAGGTAATTCTTTCTCGCAACAGAGTTCTATAATTAAGGCAATGTTCTCTAACCGTTCATGGGGTCCCATCTCACCTACTTGAGACAATTTCCACGCCCACAGAACCTTCTGTCTGTAATTATTATGCTTATTCTAAACTCTCAGTACTTAATCACAGTAAGTCATGTCCATCATTCACATCATTGAAAATTTGAAATTATCGTTGTCAAAATAACACTCAGCAAATATATATTGTGCCTAAACATATCCCATTTATTTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCTTTGGGAATGCCAGTCAGCATGGTCCCCAGTAAGTCTCCTCTCACTAAGCTATAGAACCACCGAACAATTGCGGCAACCATATACAGTTTTCCCAAAAGAAAAACAAAATTTCAAATTCACATATACTGCAGCACAAGGCAATTCTAGACACTATTTCAAGCTGTCTAACTATAACTGAAGGCCCTATTTCTTTCTTCTCGTATCCATAGTGTTCAGGTTTGTTTGCACACACCACTACTATTCTTACAAGATAATTGTCTGACTCTATTTAGTTTGGTTGCCAAAAAAAAAATCATAGGATATTAAACAATTAAGCAGGTGAGTACAATGGCTAGAGCTCGTTCTCTCTAAGTTTTTTCCTATTTTCATGGGCTCTTTTTTATGATTAAACTAAATCATGGTGGTTAACTCAAAAGGCCATTATAATAACTTCATATCCACATATAGAAGAACATTAGAATTAAATTATTTCAAGACCTCTATATGGTTTAGATGAGAGGACACTAAATAAAGTAAATCTGCTATAGCACAATGACTGGTAGATCCATGAGTAAAAGTGAAATTACTATTAAAGCAACATTACCAGCACCAAATGGTGGAAAGGATCATGGTTGTCAATGTGAATGGAGGGTCCCATGCATGAACCATTTTGGGTACAAAAGAACTGCAGATAGGCCCATCCAAGCTAAGTGGGATTTCTAACCTGCAGCTTAATTTTGCAATATGGTTATAATCCAAGAGTTAGAAGCTGAATTCCCATCGTTAATTAATCATCAAGCTGGATTTCCCACTGAGCCAGGTATCGCTCTTGGTCATGAAATGCATCAATCATCACAGGTGTAAAAAATGCAACCAAGCAAAGGCATTTTTCTTAGGCTGTTAATTATGCACCATGATGTAACTAATAGCTGGGAACCACTAGTATTAATGTCAAAGACCAAGAAACACGTCAATAAGCAAGGGGAATCTGGGAGCAAATGGGGGCGGCAAGAAGTATTTAAAAATATGATTAAAATAAGTGTCTTTCTTTGCAGATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCGGCTGCAGTCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTATGTATTAACCTTACACGAGTCTTCTTCTTCTTTTCTTATTATTACCCTTTACTTCTTTACCTGCAAGTGGAGAAGTCGTATGTTATAATTCACTGGGCAAGGTAGCAGGACTACAGCGGGTCCAAACAAGATGTTTAGGGGGATGGTAATATAAGTTAAAAATGATATTCTAATCTTATTCGTTTACTTTTTGCAGGCAAAACAAAAGAAAAACATACGACAAACTGCTTCATTTAGAGCAAAGGGACGCTTGAAGCAAGATTTTTGGATTAGATCCATTTTAGCTCCCAACTGTTTTTGTTTTCAATATTTTCAGGATTGCAGCAGAAGCTCTTTTCTTCCTCAAGATGTACAGATACTTTTACTGTTTATGCATCAGGGCCAAAACAACTTTGCAGGAATCTGGCTTTCATGATTATTACAATGGTTCAAAGATGAAATCTACAGTACTGTCAGATGTCATGAATACAATTAAAGCCGATGCCGTAATTACAATCGATTATCCTCAGGTGAGATGCTAAAATGAACAATATATTTCATAGTGCCTTAATAGAAAGAAAACCATCCTTTGCTGAAAAACAGCTAAGTGAAACATTTCCTCAAACAGTTAATATTGCTTCAGCATGTGACTTGTGAGTTTGATAAAATAATAATAATAATAATTTAATATGAAATATAATATTTTGCCAACTTGATATAGTATCTTAAATGCACATTAATATTGGTAACCAATAACTGTCCTCTTTACTAGTTAGCTGTTATTTCAGCTCTGCAAAATATAAACATTCTGCAGCTGAAGATTCTAAACCATGGGTATTATTGCTCTAATGTTCACAAAGGGACGCTCTCTGTCGACTCAATAAACATCATTTTAAGAATGATCAGTTATTTGGCTCTCATTAGGAAGCTCAATTTTCAGTATTTGTGAGACTGTCGATCCTGATACAACAAAACATAATTCATCACGTTCATAATTCATTTTGAAAACCTCAGTTATTTTATGATAGACTACCCTTATCGCAATAGTAATTGATCTAGTCAATTTAAAGAGGCTATCCACGTGAAACAATTATAATGGTTGTAACAACCTCAATAAGTTCGAAGCGACTGAAAGATGCAAACATGGATGTGATTAGGCTAATTTGACCCACTAATTACAAGGACAATATTGATGATTAATTCCAATTGTGTATACACTAATGATCATTCAGATATTCAAAGAAATTAGTACTTTTAATGATTATTCATTTTGTTCTCTTTGATAAGGCTTAAGACTGAAATTATACGTATCATTTTCCTGTTTAGAAAATGGCAAAGGCAATTATTTTCTTTATTAAATATTTAAAGGTATCCATTTTGACTGGGGGTTTATTGTGGGATTAAGGTCAGCAAATGTGGACCAAGATTGTTTCCCACTTCATTTTGTTTCCAAGTAACCAGGCTAAGATTCTTCTGATGTCTTGTCTCATTATGAGGGCGACTGAGTACTGAAACCCACTATGAACCTATATAAAATTCAGCAACAAGTTCTTTTATAGGAAGGTTATTCTGCAACCACCAAGTGGAGGAATATATCTGGACAGCAAGGGACATCAAGATGAAAACACCATTCTAATCAGACAAGAGGTCAGGCTATTTGGAAAACTTGAACAAAGCTCTTCTAAAAATGCAGCTTTACATCAGAACTAAAAGTTCTTTAACCAACAGAATAGCATTTTTCCTATAAGAAGCATATTCAGATATGCAGTCGCGATATGAATTGACGTTTCATTGAAACGTAAGGAGGCTATTTTATCAGATAATGTTGTAATCATAATGTTGCAAAGATTGTTCCTTAGAAAATAAGGACTCCTTTTTTCCTCCTTTCTCATTATTTTCATTGCACCTTTGTTTCTTCCACTTTCATTGATGAATCCATATCCAACTTCTCCCTCAATGTTCTGATCATAAAAGGGAAAATAAGAAAGAAAAAGAAGTTGAAGTCATGAGTTTCCGATGAAAAGGCACTTGCAAAATTTATTTATCTTAATATTTCTTTTTAATTTTTCCTTTTCAATTTTTTAACTTGGGGAGAGAGAGGCAAACCTTTTCACTTCTAGTCAACGGGTCAACGTCCTTGCTTAATTAAATTTTACAGAGTCTGCTTTCCACCCTAAACTGTTCCATCTTTATTTTCTTTCCATGCCATTTATTGCCACATATAAAACTGACTTGAATAGGTGTGAATCAAAATACCAAGGTTATGGGTAAAGAACATCTTGAGAACATTTAGAAAATCCGCCACGAACCAGGGATGAATTCATCAATATAAAACCAAGATAGAAATGGTTTACAGTTTTTACCTTGTAACTGCAGAGGCTAGAGATAGATAGATCGGAGAGAACCGGCTAA

mRNA sequence

CCCTCCTTCACTCTAAAAATACAAGAAAAACGCCCTTCAGTCTCAAGAGAAAGAAATGGAAGTAAGAGTTGGTGAGGAAAGGAGAGTGATTTTGGGAAGTGGGACAAACGTGAGGAGAAGCAACAAAACGAAGAAGATGAGAAGAAAAAGCATTGCCTGTGTAGCAGTGCTTACAAGAGCAGCAGAGAGTGGAGCAACAGAAGAAACAAGAAAACCAAACACTGTTTATACAGACAACTGGTTTGAGAAAATAGCCATCCACCATGTATCTCAGGCAGTACAAGCAACCTCAGGTTGGAGAAGCAAGAAGAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAACTACAACCAGATCAAACAAAGAGAGGTTATCATTCAAGCGCTTGGAAGAGCATTTCCAGCCCCAATCCTCTCTTTGATAAGAACATTGCTACCTCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGACTTCAAAGGAAAAAAAGAAAAAAATGTGGTTCAAATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCTTTGGGAATGCCAGTCAGCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCGGCTGCAGTCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTATGTATTAACCTTACACGAGTCTTCTTCTTCTTTTCTTATTATTACCCTTTACTTCTTTACCTGCAAGTGGAGAAGTCGTATGTTATAATTCACTGGGCAAGGATTGCAGCAGAAGCTCTTTTCTTCCTCAAGATGTACAGATACTTTTACTGTTTATGCATCAGGGCCAAAACAACTTTGCAGGAATCTGGCTTTCATGATTATTACAATGGTTCAAAGATGAAATCTACAGTACTGTCAGATGTCATGAATACAATTAAAGCCGATGCCGTAATTACAATCGATTATCCTCAGAGGCTAGAGATAGATAGATCGGAGAGAACCGGCTAA

Coding sequence (CDS)

ATGGAAGTAAGAGTTGGTGAGGAAAGGAGAGTGATTTTGGGAAGTGGGACAAACGTGAGGAGAAGCAACAAAACGAAGAAGATGAGAAGAAAAAGCATTGCCTGTGTAGCAGTGCTTACAAGAGCAGCAGAGAGTGGAGCAACAGAAGAAACAAGAAAACCAAACACTGTTTATACAGACAACTGGTTTGAGAAAATAGCCATCCACCATGTATCTCAGGCAGTACAAGCAACCTCAGGTTGGAGAAGCAAGAAGAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAACTACAACCAGATCAAACAAAGAGAGGTTATCATTCAAGCGCTTGGAAGAGCATTTCCAGCCCCAATCCTCTCTTTGATAAGAACATTGCTACCTCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGACTTCAAAGGAAAAAAAGAAAAAAATGTGGTTCAAATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCTTTGGGAATGCCAGTCAGCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCGGCTGCAGTCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTATGTATTAACCTTACACGAGTCTTCTTCTTCTTTTCTTATTATTACCCTTTACTTCTTTACCTGCAAGTGGAGAAGTCGTATGTTATAATTCACTGGGCAAGGATTGCAGCAGAAGCTCTTTTCTTCCTCAAGATGTACAGATACTTTTACTGTTTATGCATCAGGGCCAAAACAACTTTGCAGGAATCTGGCTTTCATGATTATTACAATGGTTCAAAGATGAAATCTACAGTACTGTCAGATGTCATGAATACAATTAAAGCCGATGCCGTAATTACAATCGATTATCCTCAGAGGCTAGAGATAGATAGATCGGAGAGAACCGGCTAA

Protein sequence

MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKLCINLTRVFFFFSYYYPLLLYLQVEKSYVIIHWARIAAEALFFLKMYRYFYCLCIRAKTTLQESGFHDYYNGSKMKSTVLSDVMNTIKADAVITIDYPQRLEIDRSERTG

Homology

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BLAST of CmaCh19G000140 vs. Swiss-Prot
Match: D27_ORYSJ (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica GN=D27 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.2e-67
Identity = 127/234 (54.27%), Postives = 164/234 (70.09%), Query Frame = 1


Query: 28  MRRKSIACVAVLTRAAESGATEETRK------------------PNTVYTDNWFEKIAIH 87
           MRR      AV+ R  E+ A+   +K                  P TVY D+WF+K+AI 
Sbjct: 32  MRRCCSTVRAVMARPQEAPASAPAKKTETAAMMSTVQTETAAAPPATVYRDSWFDKLAIG 91

Query: 88  HVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRT 147
           ++S+ +Q  SG +++K GYESL++ A   SR ++  KQ E++ QAL RA P+ IL++I+ 
Sbjct: 92  YLSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALERALPSYILTMIKV 151

Query: 148 LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMC 207
           ++P S+F+REYFAAFTT+FF WLVGPCEV ES+ +G+KEKNVV I KCRFLE TNC GMC
Sbjct: 152 MMPPSRFSREYFAAFTTIFFPWLVGPCEVMESEVEGRKEKNVVYIPKCRFLESTNCVGMC 211

Query: 208 INLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYK 244
            NLCK PCQ FI+DSLGM V M PNF+DMSCEMIFG+ PP   DDPALKQPC++
Sbjct: 212 TNLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQPPE--DDPALKQPCFR 263

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BLAST of CmaCh19G000140 vs. Swiss-Prot
Match: D27_ARATH (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.7e-57
Identity = 105/209 (50.24%), Postives = 147/209 (70.33%), Query Frame = 1


Query: 39  LTRAAESGATEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWR--SKKSGYESLVEVAT 98
           L  A E+   E +   N    D++F KIAI+++S+ +Q  +G    SK + Y+ LV+ AT
Sbjct: 46  LKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTAT 105

Query: 99  MASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPC 158
             SRN++  +Q E ++ +L RA P  I SLI+   P SK +RE FA FTT+ FAWLVGP 
Sbjct: 106 RVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPS 165

Query: 159 EVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFD 218
           EV+E++  G+KEK+VV I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+F+
Sbjct: 166 EVRETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFN 225

Query: 219 DMSCEMIFGKDPPAAVDDPALKQPCYKLC 246
           D+SC+M+FG++PP   DDPA+KQPC++ C
Sbjct: 226 DLSCKMMFGREPPEIEDDPAMKQPCFEFC 254

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BLAST of CmaCh19G000140 vs. TrEMBL
Match: A0A0A0LIR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G226860 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 7.3e-111
Identity = 199/245 (81.22%), Postives = 217/245 (88.57%), Query Frame = 1


Query: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60
           M++RV ++ RVIL +  N    N   K+RRKSI C  VLTR AE    EETRK NTVYTD
Sbjct: 1   MDLRVIQDTRVILPTMMN----NNKMKLRRKSILCFGVLTRPAEGELIEETRKTNTVYTD 60

Query: 61  NWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120
           NWF+KIAI H+SQAVQATSGWRSKKSGYESLVEV TMASRN+N IKQ+EV+IQALG AFP
Sbjct: 61  NWFDKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFP 120

Query: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFL 180
            PILSLI+ LLPQSK AREYFAAFTTVFFAWLVGPCEVKES+FKGK+EKNVVQIHKCRFL
Sbjct: 121 KPILSLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA++DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQP 240

Query: 241 CYKLC 246
           CYKLC
Sbjct: 241 CYKLC 241

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BLAST of CmaCh19G000140 vs. TrEMBL
Match: F6HBJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0179g00330 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 9.6e-79
Identity = 144/216 (66.67%), Postives = 179/216 (82.87%), Query Frame = 1


Query: 30  RKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWRSKKSGYE 89
           R S   +AVL R A++      ++  ++ TDNWF++IAI+H+SQ+VQAT+G R+ KSGYE
Sbjct: 24  RSSPPILAVLARPADNLTL--VKETPSLLTDNWFDRIAINHLSQSVQATTGLRNSKSGYE 83

Query: 90  SLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFF 149
           SLVE A M SRN++ I+Q E++I+AL +AFP+PILSLIRTL+PQSKF REYFAAFTT+FF
Sbjct: 84  SLVEAAAMVSRNFDPIQQCELVIEALNKAFPSPILSLIRTLMPQSKFTREYFAAFTTLFF 143

Query: 150 AWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPV 209
           AWLVGPC+V ES+  G++EKNVV I KCRFLE++NC GMC+NLCK P Q FIKDSLGMPV
Sbjct: 144 AWLVGPCKVIESEINGRREKNVVHIKKCRFLEESNCVGMCLNLCKNPSQKFIKDSLGMPV 203

Query: 210 SMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKLC 246
           +MVPNFDDMSC+MIFG+DPP   DDP L+QPCYKLC
Sbjct: 204 NMVPNFDDMSCQMIFGQDPPG--DDPVLRQPCYKLC 235

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BLAST of CmaCh19G000140 vs. TrEMBL
Match: M5VKD0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019954mg PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.8e-78
Identity = 153/257 (59.53%), Postives = 187/257 (72.76%), Query Frame = 1


Query: 7   EERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAES-------------------GA 66
           + RR    +  + R +++  K+R  SIA  AVLTR AE+                   GA
Sbjct: 8   QSRRSFAATLAHSRHAHEHNKLRHCSIA--AVLTRPAENINIATGKSRTIIIPADVVTGA 67

Query: 67  TEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQ 126
            E++R    VY DNWF+++AI+H+SQ VQA +G ++ KSG+ESL E AT ASR +N  KQ
Sbjct: 68  EEKSR----VYNDNWFDRMAINHLSQNVQAATGLKNNKSGFESLAEAATAASRKFNPAKQ 127

Query: 127 REVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKK 186
           RE++IQAL  AFP PI SL+R +LPQSKFAREYFA FTT+FFAWLVGPCEV+ES+  G+K
Sbjct: 128 RELVIQALDSAFPKPIFSLLRAILPQSKFAREYFAIFTTIFFAWLVGPCEVRESELDGRK 187

Query: 187 EKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKD 245
           EKNVV I KCRFLE+TNC GMCIN+CK P Q FIK SLG PV+MVPNFDDMSCEMIFG+D
Sbjct: 188 EKNVVYIKKCRFLEETNCVGMCINMCKMPSQSFIKSSLGTPVNMVPNFDDMSCEMIFGQD 247

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BLAST of CmaCh19G000140 vs. TrEMBL
Match: A0A0B2PSH0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_019129 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.1e-77
Identity = 141/207 (68.12%), Postives = 169/207 (81.64%), Query Frame = 1


Query: 39  LTRAAESGATEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMA 98
           + R      T ETRK N  Y DN F+++AIHH+S++VQ  +G  + KSGYESLVE AT+A
Sbjct: 1   MLRTPSDNITGETRKTNA-YKDNLFDRLAIHHLSKSVQEATGLGNNKSGYESLVEAATVA 60

Query: 99  SRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEV 158
              ++ I+Q+EVIIQAL RAFP PILSLI+TLLP SK +REYFA FTT+FFAWLVGP EV
Sbjct: 61  KMKFDPIQQQEVIIQALHRAFPKPILSLIKTLLPPSKLSREYFAVFTTLFFAWLVGPSEV 120

Query: 159 KESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDM 218
           +ES+  G++EKNVV + KCRFLE+TNC GMCINLCK P Q FIKD+LGMPV+MVPNFDDM
Sbjct: 121 RESEVNGRREKNVVYVTKCRFLEETNCVGMCINLCKMPSQSFIKDTLGMPVNMVPNFDDM 180

Query: 219 SCEMIFGKDPPAAVDDPALKQPCYKLC 246
           SCEMIFG++PPA+ DDPALKQPCYKLC
Sbjct: 181 SCEMIFGQEPPASTDDPALKQPCYKLC 206

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BLAST of CmaCh19G000140 vs. TrEMBL
Match: R4HZ96_MEDTR (Beta-carotene isomerase D27 OS=Medicago truncatula GN=MTR_1g471050 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 4.0e-77
Identity = 139/222 (62.61%), Postives = 176/222 (79.28%), Query Frame = 1


Query: 24  KTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWRS 83
           K  +++ K    V VL R  +  + E  RK N VY DNWF+K+AI+H+S++VQA +G  +
Sbjct: 20  KKLRLKPKHTFVVGVLARPTDDISEETLRKTN-VYKDNWFDKLAINHLSKSVQAATGISN 79

Query: 84  KKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAA 143
            KSG++SLVE AT+AS+ +N  +Q+ +I+ AL RAFP PILS+IR ++P SK AREYFA 
Sbjct: 80  NKSGFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKPILSVIRRVMPPSKLAREYFAV 139

Query: 144 FTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKD 203
           FTT+FFAWL+GP EV+ES+  G++EKN+V I KCRFLE+TNC GMCINLCK P Q FIKD
Sbjct: 140 FTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEETNCVGMCINLCKMPSQLFIKD 199

Query: 204 SLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKLC 246
           S GMPV+MVPNFDDMSCEMIFG++PPA+ DDPALKQPCYKLC
Sbjct: 200 SFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLC 240

[Close]

BLAST of CmaCh19G000140 vs. TAIR10
Match: AT1G03055.1 (AT1G03055.1 unknown protein)

HSP 1 Score: 222.2 bits (565), Expect = 4.9e-58
Identity = 105/209 (50.24%), Postives = 147/209 (70.33%), Query Frame = 1


Query: 39  LTRAAESGATEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWR--SKKSGYESLVEVAT 98
           L  A E+   E +   N    D++F KIAI+++S+ +Q  +G    SK + Y+ LV+ AT
Sbjct: 46  LKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTAT 105

Query: 99  MASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPC 158
             SRN++  +Q E ++ +L RA P  I SLI+   P SK +RE FA FTT+ FAWLVGP 
Sbjct: 106 RVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPS 165

Query: 159 EVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFD 218
           EV+E++  G+KEK+VV I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+F+
Sbjct: 166 EVRETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFN 225

Query: 219 DMSCEMIFGKDPPAAVDDPALKQPCYKLC 246
           D+SC+M+FG++PP   DDPA+KQPC++ C
Sbjct: 226 DLSCKMMFGREPPEIEDDPAMKQPCFEFC 254

[Close]

BLAST of CmaCh19G000140 vs. TAIR10
Match: AT1G64680.1 (AT1G64680.1 unknown protein)

HSP 1 Score: 155.2 bits (391), Expect = 7.4e-38
Identity = 79/214 (36.92%), Postives = 121/214 (56.54%), Query Frame = 1


Query: 41  RAAESGATEETRKP-----NTVYTDNWFEKIAIHHVSQAVQATSGWRSKKS--------G 100
           R+   G  E + +P      T Y D   E++ +   ++ +      + K +         
Sbjct: 17  RSTRCGIAEPSGEPAPMGLKTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYD 76

Query: 101 YESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTV 160
           YES VEV+    +  ++++Q+E + + L    P       R L P +K+A E+ AA T  
Sbjct: 77  YESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVP 136

Query: 161 FFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGM 220
           FF WLVGP +V E +  G K+++ V+I KCR+LE + C GMC+N+CK P QDF  +  G+
Sbjct: 137 FFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGL 196

Query: 221 PVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPC 242
           P++M PN++DMSCEMI+G+ PPA  +D A KQPC
Sbjct: 197 PLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPC 230

[Close]

BLAST of CmaCh19G000140 vs. TAIR10
Match: AT4G01995.1 (AT4G01995.1 unknown protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.7e-24
Identity = 78/245 (31.84%), Postives = 124/245 (50.61%), Query Frame = 1


Query: 10  RVILGSGTNVRRSNK--TKKMRRKSIACVAVLTRAAES--GATEETRKPNTVYTDNWFEK 69
           +V+L   T +  SN   TK +  + + C    +   +S  GA +   KP  +  D++F +
Sbjct: 6   QVLLPPPTTIVFSNSFSTKLILTRRLRCRISNSSEVKSDEGAPKLEYKPGPL--DDFFMQ 65

Query: 70  IAIHHVSQAVQATSGWRSKKSGYESLVE-VATMASRNYNQIKQREVIIQALGRAFPAPIL 129
              + + + V    G  S+K GY  L+E V  +  +   + +  +  ++ L   FP  IL
Sbjct: 66  SFRNKLVEEV----GSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLIL 125

Query: 130 SLIRTLLP---QSKFAREYFAAFTTVFFAWLVGPCEVKESDF-KGKKEKNVVQIHKCRFL 189
            L + L+    Q K A    A  T +   WL+GP +V   D   G+   + V + KC++L
Sbjct: 126 ELYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYL 185

Query: 190 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 246
           E++ C G+CIN CK P Q F KD +G+P+ M PNF D SC+  FG  PP   DD  + +P
Sbjct: 186 EESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAPPE--DDGNVNEP 242

[Close]

BLAST of CmaCh19G000140 vs. NCBI nr
Match: gi|449455260|ref|XP_004145371.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 1.0e-110
Identity = 199/245 (81.22%), Postives = 217/245 (88.57%), Query Frame = 1


Query: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60
           M++RV ++ RVIL +  N    N   K+RRKSI C  VLTR AE    EETRK NTVYTD
Sbjct: 1   MDLRVIQDTRVILPTMMN----NNKMKLRRKSILCFGVLTRPAEGELIEETRKTNTVYTD 60

Query: 61  NWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120
           NWF+KIAI H+SQAVQATSGWRSKKSGYESLVEV TMASRN+N IKQ+EV+IQALG AFP
Sbjct: 61  NWFDKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFP 120

Query: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFL 180
            PILSLI+ LLPQSK AREYFAAFTTVFFAWLVGPCEVKES+FKGK+EKNVVQIHKCRFL
Sbjct: 121 KPILSLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA++DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQP 240

Query: 241 CYKLC 246
           CYKLC
Sbjct: 241 CYKLC 241

[Close]

BLAST of CmaCh19G000140 vs. NCBI nr
Match: gi|659096928|ref|XP_008449360.1| (PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 3.4e-109
Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1


Query: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60
           M++RV ++  VIL +  N    N   K+RRK+   V VLTR+AE    EETRK  TVYTD
Sbjct: 1   MDLRVIQDTTVILPTMMN----NNKMKLRRKTFFXVGVLTRSAEGEVIEETRKTKTVYTD 60

Query: 61  NWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120
           NWF+KIAI H+SQAVQATSGWRSKKSGYESL+EV TMASRN+N IKQ+EV+IQALGRAFP
Sbjct: 61  NWFDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFP 120

Query: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFL 180
            PILSLI+ LLPQSKFAREYFAAFTTVFFAWLVGPCEVKES+FKGK+EKNVVQIHKCRFL
Sbjct: 121 KPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA++DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQP 240

Query: 241 CYKLC 246
           CYKLC
Sbjct: 241 CYKLC 241

[Close]

BLAST of CmaCh19G000140 vs. NCBI nr
Match: gi|470108690|ref|XP_004290643.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 303.9 bits (777), Expect = 3.6e-79
Identity = 149/233 (63.95%), Postives = 181/233 (77.68%), Query Frame = 1


Query: 27  KMRRKSIACVAVLTRAAE--------------SGATEETRKPNTVYTDNWFEKIAIHHVS 86
           K+RR SI  VAVL+  A+               GA E+     +VY DNWF+K+AI H+S
Sbjct: 26  KLRRSSI--VAVLSTPADVINIEADKSRIRPADGAAEK----KSVYNDNWFDKLAIDHLS 85

Query: 87  QAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLP 146
           Q VQA SG R++KSG+ESLVE A+ AS N+N  KQRE+++QAL  AFP PILSLI+ LLP
Sbjct: 86  QNVQAASGLRNRKSGFESLVEAASAASLNFNPEKQREIVVQALEGAFPRPILSLIKALLP 145

Query: 147 QSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINL 206
           +SK AREYFA FTT+FFAWLVGPCEV+ES+F G KEKNVV I KCRFLE+TNC GMCIN+
Sbjct: 146 ESKLAREYFAVFTTIFFAWLVGPCEVRESEFNGSKEKNVVHIPKCRFLEETNCVGMCINM 205

Query: 207 CKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKLC 246
           CK P Q FIKD++GMPV+MVPNFDDMSC+MIFG++PP  ++DPALKQPC+KLC
Sbjct: 206 CKMPSQSFIKDTMGMPVNMVPNFDDMSCQMIFGEEPPELLNDPALKQPCFKLC 252

[Close]

BLAST of CmaCh19G000140 vs. NCBI nr
Match: gi|657954685|ref|XP_008368789.1| (PREDICTED: beta-carotene isomerase D27, chloroplastic-like [Malus domestica])

HSP 1 Score: 302.8 bits (774), Expect = 8.1e-79
Identity = 150/236 (63.56%), Postives = 183/236 (77.54%), Query Frame = 1


Query: 20  RRSNKTKKMRRKSIACVAVLTRAAES----------GATEETRKPNTVYTDNWFEKIAIH 79
           R  ++  K+RR SI  VAVLT  AE+          GA  E ++   VY DNWF+++AI+
Sbjct: 5   RHXHERNKLRRCSI--VAVLTTPAENMNIXTDTRPAGAAVEDKR---VYKDNWFDRMAIN 64

Query: 80  HVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRT 139
           H+SQ VQA +  R+ KSGYESLVE AT+ASR +N  KQRE+++QAL  AFP P+ SL+RT
Sbjct: 65  HLSQNVQAATRLRNNKSGYESLVEAATVASRKFNPEKQRELVLQALDTAFPKPVFSLVRT 124

Query: 140 LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMC 199
           +LP+SKFAREYFA FTT+FFAWLVGPCEVKES+  G+KEKNVV I KCRFLE++NC GMC
Sbjct: 125 ILPESKFAREYFAIFTTIFFAWLVGPCEVKESEINGRKEKNVVYIKKCRFLEESNCVGMC 184

Query: 200 INLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKLC 246
           +N+CK P Q FIK SLG PV+MVPNFDDMSCEMIFG++PP   +DPALKQPCYKLC
Sbjct: 185 LNMCKVPSQSFIKTSLGTPVNMVPNFDDMSCEMIFGQNPPEISNDPALKQPCYKLC 235

[Close]

BLAST of CmaCh19G000140 vs. NCBI nr
Match: gi|296084501|emb|CBI25060.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78
Identity = 144/216 (66.67%), Postives = 179/216 (82.87%), Query Frame = 1


Query: 30  RKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKIAIHHVSQAVQATSGWRSKKSGYE 89
           R S   +AVL R A++      ++  ++ TDNWF++IAI+H+SQ+VQAT+G R+ KSGYE
Sbjct: 56  RSSPPILAVLARPADNLTL--VKETPSLLTDNWFDRIAINHLSQSVQATTGLRNSKSGYE 115

Query: 90  SLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFF 149
           SLVE A M SRN++ I+Q E++I+AL +AFP+PILSLIRTL+PQSKF REYFAAFTT+FF
Sbjct: 116 SLVEAAAMVSRNFDPIQQCELVIEALNKAFPSPILSLIRTLMPQSKFTREYFAAFTTLFF 175

Query: 150 AWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPV 209
           AWLVGPC+V ES+  G++EKNVV I KCRFLE++NC GMC+NLCK P Q FIKDSLGMPV
Sbjct: 176 AWLVGPCKVIESEINGRREKNVVHIKKCRFLEESNCVGMCLNLCKNPSQKFIKDSLGMPV 235

Query: 210 SMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKLC 246
           +MVPNFDDMSC+MIFG+DPP   DDP L+QPCYKLC
Sbjct: 236 NMVPNFDDMSCQMIFGQDPPG--DDPVLRQPCYKLC 267

The following BLAST results are available for this feature:

BLAST of CmaCh19G000140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
D27_ORYSJ	3.2e-67	54.27	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica GN=D2...	[more]
D27_ARATH	8.7e-57	50.24	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 S...	[more]

BLAST of CmaCh19G000140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIR1_CUCSA	7.3e-111	81.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G226860 PE=4 SV=1	[more]
F6HBJ4_VITVI	9.6e-79	66.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0179g00330 PE=4 SV=...	[more]
M5VKD0_PRUPE	2.8e-78	59.53	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019954mg PE=4 S...	[more]
A0A0B2PSH0_GLYSO	1.1e-77	68.12	Uncharacterized protein OS=Glycine soja GN=glysoja_019129 PE=4 SV=1	[more]
R4HZ96_MEDTR	4.0e-77	62.61	Beta-carotene isomerase D27 OS=Medicago truncatula GN=MTR_1g471050 PE=4 SV=1	[more]

BLAST of CmaCh19G000140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03055.1	4.9e-58	50.24	unknown protein	[more]
AT1G64680.1	7.4e-38	36.92	unknown protein	[more]
AT4G01995.1	2.7e-24	31.84	unknown protein	[more]

BLAST of CmaCh19G000140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455260\|ref\|XP_004145371.1\|	1.0e-110	81.22	PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis sativus]	[more]
gi\|659096928\|ref\|XP_008449360.1\|	3.4e-109	80.00	PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucu...	[more]
gi\|470108690\|ref\|XP_004290643.1\|	3.6e-79	63.95	PREDICTED: beta-carotene isomerase D27, chloroplastic [Fragaria vesca subsp. ves...	[more]
gi\|657954685\|ref\|XP_008368789.1\|	8.1e-79	63.56	PREDICTED: beta-carotene isomerase D27, chloroplastic-like [Malus domestica]	[more]
gi\|296084501\|emb\|CBI25060.3\|	1.4e-78	66.67	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025114	DUF4033

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009536	plastid
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016859	cis-trans isomerase activity
molecular_function	GO:0005506	iron ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000140.1	CmaCh19G000140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Domain of unknown function DUF4033	PFAM	PF13225	DUF4033	coord: 151..230 score: 7.5
None	No IPR available	PANTHER	PTHR33591	FAMILY NOT NAMED	coord: 15..268 score: 1.7E
None	No IPR available	PANTHER	PTHR33591:SF3	BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC	coord: 15..268 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G000140	Cucsa.016410	Cucumber (Gy14) v1	cgycmaB0651
CmaCh19G000140	Cla006026	Watermelon (97103) v1	cmawmB487
CmaCh19G000140	Csa2G226860	Cucumber (Chinese Long) v2	cmacuB504
CmaCh19G000140	MELO3C014318	Melon (DHL92) v3.5.1	cmameB477
CmaCh19G000140	ClCG07G000550	Watermelon (Charleston Gray)	cmawcgB469
CmaCh19G000140	CSPI02G11300	Wild cucumber (PI 183967)	cmacpiB509
CmaCh19G000140	CmoCh19G000130	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G000140	Lsi05G009680	Bottle gourd (USVL1VR-Ls)	cmalsiB491
CmaCh19G000140	Cp4.1LG15g00130	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G000140	MELO3C014318.2	Melon (DHL92) v3.6.1	cmamedB553
CmaCh19G000140	CsaV3_2G013780	Cucumber (Chinese Long) v3	cmacucB0605
CmaCh19G000140	Cla97C07G128850	Watermelon (97103) v2	cmawmbB542
CmaCh19G000140	Bhi05G000205	Wax gourd	cmawgoB0645
CmaCh19G000140	CsGy2G011330	Cucumber (Gy14) v2	cgybcmaB209
CmaCh19G000140	Carg08994	Silver-seed gourd	carcmaB1080
CmaCh19G000140	Carg16820	Silver-seed gourd	carcmaB1049

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G000140	CmaCh02G017790	Cucurbita maxima (Rimu)	cmacmaB447

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G000140	Cucumber (Chinese Long) v3	cmacucB0613
CmaCh19G000140	Cucumber (Chinese Long) v3	cmacucB0610
CmaCh19G000140	Cucumber (Chinese Long) v3	cmacucB0619
CmaCh19G000140	Cucumber (Chinese Long) v3	cmacucB0631
CmaCh19G000140	Watermelon (97103) v2	cmawmbB534
CmaCh19G000140	Wax gourd	cmawgoB0638
CmaCh19G000140	Cucurbita maxima (Rimu)	cmacmaB260
CmaCh19G000140	Cucurbita maxima (Rimu)	cmacmaB361
CmaCh19G000140	Cucurbita maxima (Rimu)	cmacmaB450
CmaCh19G000140	Cucumber (Gy14) v1	cgycmaB0525
CmaCh19G000140	Cucurbita moschata (Rifu)	cmacmoB521
CmaCh19G000140	Cucurbita moschata (Rifu)	cmacmoB523
CmaCh19G000140	Wild cucumber (PI 183967)	cmacpiB514
CmaCh19G000140	Wild cucumber (PI 183967)	cmacpiB526
CmaCh19G000140	Cucumber (Chinese Long) v2	cmacuB520
CmaCh19G000140	Melon (DHL92) v3.5.1	cmameB474
CmaCh19G000140	Melon (DHL92) v3.5.1	cmameB475
CmaCh19G000140	Watermelon (Charleston Gray)	cmawcgB467
CmaCh19G000140	Cucurbita pepo (Zucchini)	cmacpeB536
CmaCh19G000140	Cucurbita pepo (Zucchini)	cmacpeB543
CmaCh19G000140	Cucurbita pepo (Zucchini)	cmacpeB550
CmaCh19G000140	Bottle gourd (USVL1VR-Ls)	cmalsiB495
CmaCh19G000140	Cucumber (Gy14) v2	cgybcmaB216
CmaCh19G000140	Cucumber (Gy14) v2	cgybcmaB380
CmaCh19G000140	Cucumber (Gy14) v2	cgybcmaB782
CmaCh19G000140	Melon (DHL92) v3.6.1	cmamedB549
CmaCh19G000140	Melon (DHL92) v3.6.1	cmamedB550
CmaCh19G000140	Melon (DHL92) v3.6.1	cmamedB557