CmaCh18G012250 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGTATCTCTTTTTCTTCCTCTGTTGTAAATGGGTAATTTCTGAAGGAATTTGATAACATTTCTTTCGAATGGGTTTAGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAGTAAGCAATCACAGTTTTCTGGGAACGCCTTTGCTTTTAGGTTCTTGTTGGGGCTTTCATTATTTCTGTTATTTGATGTGTTTTTTTTTTGGTAGAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGTAACATACGAGATATTACATTGTTGACCTGATTATACAGTTATTTTTTTAATGTTCTTCTTCTACTTGCTGGGAAACTTCCGTTAATCTCTGTAAGAGTGTGGAAAAAGGAGAATTCGAGGGACTTGAAACTGCTGGCTCGTGTAGTACTTAAAGATCAAGTAGGGATTGTGATGGAAAATAAGAGACTGGGACGGGGGGGTATATATATTTGATGGATCTTGTTAAAAGAGAATGACCTTAACGATGACTGGAGAGCCTACTGAAAGCTTTGCTATCAAAGTGTCCTGATTAGATTGAGATGAACTTTTATGTGACCGGATTTGTAGAATAAAATTGTATCCCTTAAGAACCGGATGGGCATCTAACTCCTTCATTCAGGCTCCACTTTGCTCGGGGGATATAGCTCAGTTGGTAGATCTCCACTCTTGCAGTTGGGTCGTTGCGATTACGGGTAGGATGTCTAATTGTCCAGGTGATCGATTTCGGTTGGGTGGATGCCTAATGAAAATCCTATCTAATAAGTTCAAAGATGCTTCACCTGTTCAATCCAACTCTTCCCAAAGTTGATCCAACCTCCCTTGAATTTGAATAAGATTGTCATTCTAACCCTGATGGTTTTCTAGACATTCTATGTGTAGCGTTCATCTCGGAATCTTCTTGAAGAGTGAAGCTCTCTTATTCGTCCTCTATCTTGCGTAAATTTCTTTTCTAATGTCTTGTTATTGTTAATTCAATTTGGCTCAAATGTCACCTCAGATCTCTTTATCTAGCCTTCCGTCTCTATCCGCTAGCAAATATTGTTCTTTTTGGGCTTTTTCTTTCGGGCTTCCCCTCGAGGTTTTTAAAAAGGTGTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTACTCTCCAACCGACGTGGGATCTCACAATCTATCCCATTCGGTTTCAACAATTCTCCTCTCCAACCAATGTGGATCTCAAATATTTGCTAAGACCATACAAAAAAAAGAAGTCTCACCACCTCCTTATATAAGATGTTCTCACATTGTCGACGAAGCCATTATCACTTTTTTGTTCTACATTCTAGCATCATACCATTCCATGAGTTGCTGGCTTGCGTATTAGAGTAACTTCATCAGGCACCTTGTTGATGTCTAGTTGAAGCATTGGGACTTTTGCTTGCAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGGTATAGTATCTCACCAATTTTTGTTGTTAGAGAACACGCTGTGTTCAAAAGATTAAATTATTTAGCTTCCCTTGACACTCTCTAAATTGTAATTTTTGCATTTATCTTTGGAATCAGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGGTATATGATTCCATTTTTTATGGTCTCTTTTGCTCTCTTGCCGCACATGGAATAATGTCTTAGAACGACCATAATTAGTGGAGAAAATGTTATCTCCTTAAAAATCGCTTATGCTCATCAATGGAATAATTAGAAAAATAGGTTGAAGGGAAGTAGTTCTAACTTTGAACTTTTACATAGAAGAACGTAAAGGGGGCTTAGAGAGCATAGGAATGACTAGTACTCTAAAGGACTTACGTTTTGATAATCAACCGCTATCAATATTTGAAGAAATCTGCAATGTCATATTGGTTTCTTTTCCTTATGGTGTTGAGGTGTTTCTACTGGTTGTTTCTTCGATGAAACATGCATTGATAGTAATAGTTAAACAAATGCTATGATGTTCTATGAAACCTTTCAAAATCATGGTTTTCACAACTTTTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTAAGTAATAAATCTCCAATATATTTTTTGGCTATTGACGTGCTTTTCTCAGAAGTCATGAGCATGGTACTGATACTCATTTTTGCCAATAAATTAGAGAATGTTACTATTTTCTAGTTCAACAATCTTATTGACGCCCATTTCTTAGAGCTCACTAAGCTTTGCATTGATTGACGTACAAAAATTACTTTTTGATGCAACTGTTTCCAGCAAGACATGGAAAGAACAGAAACGTTACGCTGTGGATTTCCTTAGAAACTTAGGAAAGGGATATAACCTCTCTTTCAATGCCCTTTCTTATTTCTTCACTGTCTTTGGGCCAAAATCCATGAGAGGTGCTTGTAATTTTCCACTTAATATAATTTCTATGAACCTGCCTGTAACTGCCAAAGCTCACCGCTAGCCGATATATTTTTTTTTTGGGCTTTCCCTCCAAGTTTTTTAAGACGCATCTACGATGGAGAGGTTTCTACACTCTTATAAACGGTGTTCCGTTCTCCTCCTCAATCGATGTAGGATCTCACACTGCCTTTTTACGAAAATGATTTTGTTCTAAATTCTCTTTTATTTTATTCCTAATGAAGTAAATGCTTGGAATAAAGTTTGGAGTATCCTGCACCTATTTGGTACATGTTGAAATACGCGCTTGGACAACCAAATGAATGCTTGTTACGAATTTGTATAGAACAGAAGCTTAGCAGATCTTGGCAGATAATTTGGACATGATGCAGCGTCAACGTCTATAGAGAACCTTTGATTTCTTGGCCTGATCTGCTGAACTCAACTCTTTTTCCTCAAATCTAATTTGTTGGGGTGAAAATGTAAGAATCTATTAGAATCTATATGTTTGGGCGAAGAAAAATGTACATGAAAGAATATATGAAGAACAAATAAGGTCATACAAGTATCCCAGTGACCCCTTTTAGAGGTACCCTTCTTTAAGAACTATAATTTAATTTCTCCATGTACACAAGGAAAATGAAAAACAAAATTTATCTTTCAATTCTCTCTAACTTGAGCTCCTGACTCTTCTTTTTGTTATCAGGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQRR
BLAST of CmaCh18G012250 vs. Swiss-Prot
Match: CCB2_ARATH (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana GN=CCB2 PE=1 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 3.3e-81 Identity = 153/263 (58.17%), Postives = 202/263 (76.81%), Query Frame = 1
BLAST of CmaCh18G012250 vs. TrEMBL
Match: A0A0A0LBA9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180340 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 8.1e-127 Identity = 233/284 (82.04%), Postives = 256/284 (90.14%), Query Frame = 1
BLAST of CmaCh18G012250 vs. TrEMBL
Match: M5X1L8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009484mg PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.4e-99 Identity = 183/279 (65.59%), Postives = 230/279 (82.44%), Query Frame = 1
BLAST of CmaCh18G012250 vs. TrEMBL
Match: A0A067JER9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26153 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 1.2e-98 Identity = 186/279 (66.67%), Postives = 227/279 (81.36%), Query Frame = 1
BLAST of CmaCh18G012250 vs. TrEMBL
Match: W9RWP2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015739 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 3.6e-98 Identity = 191/294 (64.97%), Postives = 229/294 (77.89%), Query Frame = 1
BLAST of CmaCh18G012250 vs. TrEMBL
Match: F6HP63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g00490 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 7.7e-93 Identity = 181/279 (64.87%), Postives = 222/279 (79.57%), Query Frame = 1
BLAST of CmaCh18G012250 vs. TAIR10
Match: AT5G52110.1 (AT5G52110.1 Protein of unknown function (DUF2930)) HSP 1 Score: 303.1 bits (775), Expect = 1.9e-82 Identity = 153/263 (58.17%), Postives = 202/263 (76.81%), Query Frame = 1
BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|659077375|ref|XP_008439172.1| (PREDICTED: uncharacterized protein LOC103484048 isoform X1 [Cucumis melo]) HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-129 Identity = 240/284 (84.51%), Postives = 258/284 (90.85%), Query Frame = 1
BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|449446061|ref|XP_004140790.1| (PREDICTED: uncharacterized protein LOC101219803 isoform X1 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126 Identity = 233/284 (82.04%), Postives = 256/284 (90.14%), Query Frame = 1
BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|595864362|ref|XP_007211756.1| (hypothetical protein PRUPE_ppa009484mg [Prunus persica]) HSP 1 Score: 370.9 bits (951), Expect = 2.1e-99 Identity = 183/279 (65.59%), Postives = 230/279 (82.44%), Query Frame = 1
BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|645234628|ref|XP_008223895.1| (PREDICTED: uncharacterized protein LOC103323666 [Prunus mume]) HSP 1 Score: 369.8 bits (948), Expect = 4.6e-99 Identity = 183/279 (65.59%), Postives = 228/279 (81.72%), Query Frame = 1
BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|802769276|ref|XP_012090311.1| (PREDICTED: uncharacterized protein LOC105648509 isoform X1 [Jatropha curcas]) HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98 Identity = 186/279 (66.67%), Postives = 227/279 (81.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|