CmaCh18G012250 (gene) Cucurbita maxima (Rimu)

NameCmaCh18G012250
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionChaperone htpG
LocationCma_Chr18 : 9651692 .. 9655544 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGTATCTCTTTTTCTTCCTCTGTTGTAAATGGGTAATTTCTGAAGGAATTTGATAACATTTCTTTCGAATGGGTTTAGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAGTAAGCAATCACAGTTTTCTGGGAACGCCTTTGCTTTTAGGTTCTTGTTGGGGCTTTCATTATTTCTGTTATTTGATGTGTTTTTTTTTTGGTAGAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGTAACATACGAGATATTACATTGTTGACCTGATTATACAGTTATTTTTTTAATGTTCTTCTTCTACTTGCTGGGAAACTTCCGTTAATCTCTGTAAGAGTGTGGAAAAAGGAGAATTCGAGGGACTTGAAACTGCTGGCTCGTGTAGTACTTAAAGATCAAGTAGGGATTGTGATGGAAAATAAGAGACTGGGACGGGGGGGTATATATATTTGATGGATCTTGTTAAAAGAGAATGACCTTAACGATGACTGGAGAGCCTACTGAAAGCTTTGCTATCAAAGTGTCCTGATTAGATTGAGATGAACTTTTATGTGACCGGATTTGTAGAATAAAATTGTATCCCTTAAGAACCGGATGGGCATCTAACTCCTTCATTCAGGCTCCACTTTGCTCGGGGGATATAGCTCAGTTGGTAGATCTCCACTCTTGCAGTTGGGTCGTTGCGATTACGGGTAGGATGTCTAATTGTCCAGGTGATCGATTTCGGTTGGGTGGATGCCTAATGAAAATCCTATCTAATAAGTTCAAAGATGCTTCACCTGTTCAATCCAACTCTTCCCAAAGTTGATCCAACCTCCCTTGAATTTGAATAAGATTGTCATTCTAACCCTGATGGTTTTCTAGACATTCTATGTGTAGCGTTCATCTCGGAATCTTCTTGAAGAGTGAAGCTCTCTTATTCGTCCTCTATCTTGCGTAAATTTCTTTTCTAATGTCTTGTTATTGTTAATTCAATTTGGCTCAAATGTCACCTCAGATCTCTTTATCTAGCCTTCCGTCTCTATCCGCTAGCAAATATTGTTCTTTTTGGGCTTTTTCTTTCGGGCTTCCCCTCGAGGTTTTTAAAAAGGTGTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTACTCTCCAACCGACGTGGGATCTCACAATCTATCCCATTCGGTTTCAACAATTCTCCTCTCCAACCAATGTGGATCTCAAATATTTGCTAAGACCATACAAAAAAAAGAAGTCTCACCACCTCCTTATATAAGATGTTCTCACATTGTCGACGAAGCCATTATCACTTTTTTGTTCTACATTCTAGCATCATACCATTCCATGAGTTGCTGGCTTGCGTATTAGAGTAACTTCATCAGGCACCTTGTTGATGTCTAGTTGAAGCATTGGGACTTTTGCTTGCAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGGTATAGTATCTCACCAATTTTTGTTGTTAGAGAACACGCTGTGTTCAAAAGATTAAATTATTTAGCTTCCCTTGACACTCTCTAAATTGTAATTTTTGCATTTATCTTTGGAATCAGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGGTATATGATTCCATTTTTTATGGTCTCTTTTGCTCTCTTGCCGCACATGGAATAATGTCTTAGAACGACCATAATTAGTGGAGAAAATGTTATCTCCTTAAAAATCGCTTATGCTCATCAATGGAATAATTAGAAAAATAGGTTGAAGGGAAGTAGTTCTAACTTTGAACTTTTACATAGAAGAACGTAAAGGGGGCTTAGAGAGCATAGGAATGACTAGTACTCTAAAGGACTTACGTTTTGATAATCAACCGCTATCAATATTTGAAGAAATCTGCAATGTCATATTGGTTTCTTTTCCTTATGGTGTTGAGGTGTTTCTACTGGTTGTTTCTTCGATGAAACATGCATTGATAGTAATAGTTAAACAAATGCTATGATGTTCTATGAAACCTTTCAAAATCATGGTTTTCACAACTTTTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTAAGTAATAAATCTCCAATATATTTTTTGGCTATTGACGTGCTTTTCTCAGAAGTCATGAGCATGGTACTGATACTCATTTTTGCCAATAAATTAGAGAATGTTACTATTTTCTAGTTCAACAATCTTATTGACGCCCATTTCTTAGAGCTCACTAAGCTTTGCATTGATTGACGTACAAAAATTACTTTTTGATGCAACTGTTTCCAGCAAGACATGGAAAGAACAGAAACGTTACGCTGTGGATTTCCTTAGAAACTTAGGAAAGGGATATAACCTCTCTTTCAATGCCCTTTCTTATTTCTTCACTGTCTTTGGGCCAAAATCCATGAGAGGTGCTTGTAATTTTCCACTTAATATAATTTCTATGAACCTGCCTGTAACTGCCAAAGCTCACCGCTAGCCGATATATTTTTTTTTTGGGCTTTCCCTCCAAGTTTTTTAAGACGCATCTACGATGGAGAGGTTTCTACACTCTTATAAACGGTGTTCCGTTCTCCTCCTCAATCGATGTAGGATCTCACACTGCCTTTTTACGAAAATGATTTTGTTCTAAATTCTCTTTTATTTTATTCCTAATGAAGTAAATGCTTGGAATAAAGTTTGGAGTATCCTGCACCTATTTGGTACATGTTGAAATACGCGCTTGGACAACCAAATGAATGCTTGTTACGAATTTGTATAGAACAGAAGCTTAGCAGATCTTGGCAGATAATTTGGACATGATGCAGCGTCAACGTCTATAGAGAACCTTTGATTTCTTGGCCTGATCTGCTGAACTCAACTCTTTTTCCTCAAATCTAATTTGTTGGGGTGAAAATGTAAGAATCTATTAGAATCTATATGTTTGGGCGAAGAAAAATGTACATGAAAGAATATATGAAGAACAAATAAGGTCATACAAGTATCCCAGTGACCCCTTTTAGAGGTACCCTTCTTTAAGAACTATAATTTAATTTCTCCATGTACACAAGGAAAATGAAAAACAAAATTTATCTTTCAATTCTCTCTAACTTGAGCTCCTGACTCTTCTTTTTGTTATCAGGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA

mRNA sequence

ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA

Coding sequence (CDS)

ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA

Protein sequence

MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQRR
BLAST of CmaCh18G012250 vs. Swiss-Prot
Match: CCB2_ARATH (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana GN=CCB2 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.3e-81
Identity = 153/263 (58.17%), Postives = 202/263 (76.81%), Query Frame = 1

Query: 21  RAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLN 80
           RA+  ++    T        + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLN
Sbjct: 19  RAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLLLLN 78

Query: 81  HFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVL 140
           HF   S++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V   + +LPE  EQ+FV+
Sbjct: 79  HF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEEGEQVFVI 138

Query: 141 SQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQ 200
           S N+ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF+++
Sbjct: 139 SSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDWFKKK 198

Query: 201 LQSIGLSALNDSLYFPQISESGL-WQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILV 260
           +  IGL+ + ++LYFPQ + S L   +L  GTRS+ VQP+ QN     NE +K+ GF+LV
Sbjct: 199 VDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLV 258

Query: 261 ASSLSYAFSDKDRAWIRALATKF 283
           AS+  YA+SDKDRAWI A+A KF
Sbjct: 259 ASTAGYAYSDKDRAWIGAMAEKF 273

BLAST of CmaCh18G012250 vs. TrEMBL
Match: A0A0A0LBA9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180340 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 8.1e-127
Identity = 233/284 (82.04%), Postives = 256/284 (90.14%), Query Frame = 1

Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           M  +I SP PL +L+S   FRAK+ +K P I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTEALGISLAAFSIALPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GA+PSGEA LPEG EQIF+LSQ +SDN+K+D+AWATYILLRNTNSISVLI  QG LCVRG
Sbjct: 121 GALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDIS ADLLAWFEEQLQSIGLSAL D++YFPQISESGLWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVV 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN 285
           QNL QSGNE++ +GGFIL+ASSLSYAFSDKDRAWIRA+A KFD+
Sbjct: 241 QNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDD 284

BLAST of CmaCh18G012250 vs. TrEMBL
Match: M5X1L8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009484mg PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.4e-99
Identity = 183/279 (65.59%), Postives = 230/279 (82.44%), Query Frame = 1

Query: 6   LSPDPLIRLSSTPRFRAKN-GSKSPVITARLDDSKNSPNR-QLNLSVLRFTLGIPGLDES 65
           LSP+ LI+L   P+FRA+N  +    ++ARLD+SK+S    QLNLSVLRFTLGIPGLDES
Sbjct: 8   LSPNSLIQLKIPPKFRARNCRTNFSAVSARLDNSKSSSAEPQLNLSVLRFTLGIPGLDES 67

Query: 66  YLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV 125
           YLPRWIGYGFGSLL+LNHF GS S A  T AQLRTEALG+SLAAFSIALPYLG+FL+GA 
Sbjct: 68  YLPRWIGYGFGSLLILNHFAGSISPASTTPAQLRTEALGLSLAAFSIALPYLGRFLKGAT 127

Query: 126 PSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWN 185
           P  + ++P G EQIFV+SQNVS+  K+DLAWATYILLRNTN+I+V+I I+ ELCVRGYWN
Sbjct: 128 PMDQTSIPRGCEQIFVISQNVSNTQKEDLAWATYILLRNTNTIAVIISIRNELCVRGYWN 187

Query: 186 SPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNL 245
            P+D+S  ++LAWFE+Q++SIGLS + ++LY  QI +SGLW+ML +GTRS+LVQP+ Q L
Sbjct: 188 IPDDVSKTNVLAWFEKQIESIGLSDVKETLYLSQIEDSGLWEMLPQGTRSLLVQPIVQVL 247

Query: 246 NQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF 283
             S NE++K  GF+++ASS+ YA+SDKD+AWI A+A KF
Sbjct: 248 PSSDNEIQKSEGFVMLASSMRYAYSDKDKAWIGAIANKF 286

BLAST of CmaCh18G012250 vs. TrEMBL
Match: A0A067JER9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26153 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.2e-98
Identity = 186/279 (66.67%), Postives = 227/279 (81.36%), Query Frame = 1

Query: 6   LSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQ--LNLSVLRFTLGIPGLDES 65
           LS  PLI+L+  P+FRAK   KS VI +R+D+S+   N+Q  LNLS+LRFT GIPGLDES
Sbjct: 4   LSIHPLIQLNIRPKFRAKVTRKSLVIASRIDNSQTRENQQQELNLSILRFTFGIPGLDES 63

Query: 66  YLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV 125
           YLPRWIGYGFGSLLLLNHF+GS+SAA  +  QLRTEALGISLAAFSIALP+ G+FL+G  
Sbjct: 64  YLPRWIGYGFGSLLLLNHFLGSNSAA--SPPQLRTEALGISLAAFSIALPFFGRFLKGVR 123

Query: 126 PSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWN 185
           P  +A LP GAEQIF++S+N+ D  K+DLAWATY+LLRNTN+I+VLI IQG LCVRGYW 
Sbjct: 124 PMDQAALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTIAVLISIQGGLCVRGYWK 183

Query: 186 SPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNL 245
           +P+++S A LL WF +Q+ SIGL  L D+LYFPQ +ESGLW+ML KGTRS+LV+PV Q  
Sbjct: 184 TPDNLSKAQLLDWFLKQIDSIGLFDLRDTLYFPQTAESGLWEMLPKGTRSLLVEPVHQAR 243

Query: 246 NQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF 283
            +S NEMEKI GF+L+ASS+ YA+ DKDRAWIRA+  KF
Sbjct: 244 AKSANEMEKIEGFVLLASSMEYAYGDKDRAWIRAVTNKF 280

BLAST of CmaCh18G012250 vs. TrEMBL
Match: W9RWP2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015739 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.6e-98
Identity = 191/294 (64.97%), Postives = 229/294 (77.89%), Query Frame = 1

Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKS-PVITARLDDSKNS--PNRQLNLSVLRFTLGI 60
           MS +I+S  PL +L     F  ++ ++   VI++RLDD+  S  PN QLNLSVLRFTLGI
Sbjct: 1   MSNSIVSLSPLSQLKIPTGFGTRSSTRRFSVISSRLDDNSRSGQPNPQLNLSVLRFTLGI 60

Query: 61  PGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGK 120
           PGLDESYLPRWIGYGFGSLL+LNHFVGS+S   ITSAQLRTEALG+SLAAFSI LPYLGK
Sbjct: 61  PGLDESYLPRWIGYGFGSLLVLNHFVGSNSVTDITSAQLRTEALGLSLAAFSIVLPYLGK 120

Query: 121 FL---------EGAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISV 180
           FL         +GA P  + T+PEG+EQIF+LS+NVS+  K+DLAWATYILLRNTN+++V
Sbjct: 121 FLKLYEDEKYLQGATPMDQTTIPEGSEQIFMLSENVSNTEKEDLAWATYILLRNTNTMAV 180

Query: 181 LILIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLS 240
           LI IQGELCVRGYWN+P D+S  DLL WF  Q++  G+S + D+LYFPQIS+SGLW +L 
Sbjct: 181 LISIQGELCVRGYWNTPTDVSKTDLLDWFGRQIEQFGISDVKDTLYFPQISDSGLWDILP 240

Query: 241 KGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF 283
           KGTRSVLVQPV Q  + S   ME   GFILVAS++SYA++ KDRAWI ALA KF
Sbjct: 241 KGTRSVLVQPVPQVPDSSDKTMETNQGFILVASTISYAYNVKDRAWIGALAKKF 294

BLAST of CmaCh18G012250 vs. TrEMBL
Match: F6HP63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g00490 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 7.7e-93
Identity = 181/279 (64.87%), Postives = 222/279 (79.57%), Query Frame = 1

Query: 10  PLIRLSSTPRFRAKNGSK----SPVITARLDDSKNSPNRQ--LNLSVLRFTLGIPGLDES 69
           PLI L   P F AK  S     S + T R   S ++ N+Q  LNLSVLRFTLGIPG DES
Sbjct: 8   PLIPLKP-PSFPAKARSSHLPVSTINTTRKFQSISASNQQQQLNLSVLRFTLGIPGFDES 67

Query: 70  YLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV 129
           YLPRWIGYGFGS +LLNHFVGS     IT+AQLRTEALG+ LAAFS+ LPYLGKFL+GA 
Sbjct: 68  YLPRWIGYGFGSFILLNHFVGSDLNT-ITAAQLRTEALGLCLAAFSVVLPYLGKFLKGAA 127

Query: 130 PSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWN 189
           P  + TLPEG EQIFV++QN+SD +K+DLAWATYILLRNTN+I+VLI I+G LCVRGYWN
Sbjct: 128 PVDQTTLPEGIEQIFVMTQNISDILKEDLAWATYILLRNTNTIAVLISIRGALCVRGYWN 187

Query: 190 SPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNL 249
           +P+D+S A +L W E++++ IGLS L D+LYFPQ ++SGLW+ML KGT S+LVQPV+Q  
Sbjct: 188 TPDDVSKARVLDWVEKEIEKIGLSDLKDTLYFPQSADSGLWEMLPKGTCSLLVQPVSQIP 247

Query: 250 NQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF 283
           +Q  +EMEKI GF+L+ASS++YA++DKDRAWI A+A KF
Sbjct: 248 SQGTDEMEKIDGFVLLASSMNYAYTDKDRAWIGAVANKF 284

BLAST of CmaCh18G012250 vs. TAIR10
Match: AT5G52110.1 (AT5G52110.1 Protein of unknown function (DUF2930))

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-82
Identity = 153/263 (58.17%), Postives = 202/263 (76.81%), Query Frame = 1

Query: 21  RAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLN 80
           RA+  ++    T        + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLN
Sbjct: 19  RAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLLLLN 78

Query: 81  HFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVL 140
           HF   S++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V   + +LPE  EQ+FV+
Sbjct: 79  HF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEEGEQVFVI 138

Query: 141 SQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQ 200
           S N+ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF+++
Sbjct: 139 SSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDWFKKK 198

Query: 201 LQSIGLSALNDSLYFPQISESGL-WQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILV 260
           +  IGL+ + ++LYFPQ + S L   +L  GTRS+ VQP+ QN     NE +K+ GF+LV
Sbjct: 199 VDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLV 258

Query: 261 ASSLSYAFSDKDRAWIRALATKF 283
           AS+  YA+SDKDRAWI A+A KF
Sbjct: 259 ASTAGYAYSDKDRAWIGAMAEKF 273

BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|659077375|ref|XP_008439172.1| (PREDICTED: uncharacterized protein LOC103484048 isoform X1 [Cucumis melo])

HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-129
Identity = 240/284 (84.51%), Postives = 258/284 (90.85%), Query Frame = 1

Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           M  +I SP PL +L+S   FRAK+  K+P I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MISSIPSPSPLNQLTSALPFRAKSKMKAPAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTEALGISLAAFSIALPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEG EQIF+LSQ VSDN+K+D+AWATYILLRNTNSISVLI  QG LCVRG
Sbjct: 121 GAVPSGEATLPEGTEQIFLLSQIVSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDIS ADLLAWFEEQLQSIGLSAL D++YFPQISESGLWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVV 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN 285
           QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD+
Sbjct: 241 QNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDD 284

BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|449446061|ref|XP_004140790.1| (PREDICTED: uncharacterized protein LOC101219803 isoform X1 [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126
Identity = 233/284 (82.04%), Postives = 256/284 (90.14%), Query Frame = 1

Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           M  +I SP PL +L+S   FRAK+ +K P I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTEALGISLAAFSIALPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GA+PSGEA LPEG EQIF+LSQ +SDN+K+D+AWATYILLRNTNSISVLI  QG LCVRG
Sbjct: 121 GALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDIS ADLLAWFEEQLQSIGLSAL D++YFPQISESGLWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVV 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN 285
           QNL QSGNE++ +GGFIL+ASSLSYAFSDKDRAWIRA+A KFD+
Sbjct: 241 QNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDD 284

BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|595864362|ref|XP_007211756.1| (hypothetical protein PRUPE_ppa009484mg [Prunus persica])

HSP 1 Score: 370.9 bits (951), Expect = 2.1e-99
Identity = 183/279 (65.59%), Postives = 230/279 (82.44%), Query Frame = 1

Query: 6   LSPDPLIRLSSTPRFRAKN-GSKSPVITARLDDSKNSPNR-QLNLSVLRFTLGIPGLDES 65
           LSP+ LI+L   P+FRA+N  +    ++ARLD+SK+S    QLNLSVLRFTLGIPGLDES
Sbjct: 8   LSPNSLIQLKIPPKFRARNCRTNFSAVSARLDNSKSSSAEPQLNLSVLRFTLGIPGLDES 67

Query: 66  YLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV 125
           YLPRWIGYGFGSLL+LNHF GS S A  T AQLRTEALG+SLAAFSIALPYLG+FL+GA 
Sbjct: 68  YLPRWIGYGFGSLLILNHFAGSISPASTTPAQLRTEALGLSLAAFSIALPYLGRFLKGAT 127

Query: 126 PSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWN 185
           P  + ++P G EQIFV+SQNVS+  K+DLAWATYILLRNTN+I+V+I I+ ELCVRGYWN
Sbjct: 128 PMDQTSIPRGCEQIFVISQNVSNTQKEDLAWATYILLRNTNTIAVIISIRNELCVRGYWN 187

Query: 186 SPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNL 245
            P+D+S  ++LAWFE+Q++SIGLS + ++LY  QI +SGLW+ML +GTRS+LVQP+ Q L
Sbjct: 188 IPDDVSKTNVLAWFEKQIESIGLSDVKETLYLSQIEDSGLWEMLPQGTRSLLVQPIVQVL 247

Query: 246 NQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF 283
             S NE++K  GF+++ASS+ YA+SDKD+AWI A+A KF
Sbjct: 248 PSSDNEIQKSEGFVMLASSMRYAYSDKDKAWIGAIANKF 286

BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|645234628|ref|XP_008223895.1| (PREDICTED: uncharacterized protein LOC103323666 [Prunus mume])

HSP 1 Score: 369.8 bits (948), Expect = 4.6e-99
Identity = 183/279 (65.59%), Postives = 228/279 (81.72%), Query Frame = 1

Query: 6   LSPDPLIRLSSTPRFRAKN-GSKSPVITARLDDSK-NSPNRQLNLSVLRFTLGIPGLDES 65
           LSP+ LI+L   P+FRA+N  +    ++ARLD+SK NS   QLNLSVLRFTLGIPGLDES
Sbjct: 8   LSPNSLIQLKIPPKFRARNCRTNFSAVSARLDNSKSNSAEPQLNLSVLRFTLGIPGLDES 67

Query: 66  YLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV 125
           YLPRWIGYGFGSLL+LNHF GS S A  T AQLRTEALG+SLAAFSIALPYLG+FL+GA 
Sbjct: 68  YLPRWIGYGFGSLLILNHFAGSISPASTTPAQLRTEALGLSLAAFSIALPYLGRFLKGAT 127

Query: 126 PSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWN 185
           P  + ++P G EQ+FV+SQNVS+  K+DLAWATYILLRNTN+I+V+I I+ ELCVRGYWN
Sbjct: 128 PMDQTSIPRGCEQMFVISQNVSNTQKEDLAWATYILLRNTNTIAVIISIRNELCVRGYWN 187

Query: 186 SPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNL 245
            P+D+S  ++L WFE+Q++SIGLS + ++LY  QI +SGLW+ML +GTRS+LVQP+ Q L
Sbjct: 188 IPDDVSKTNVLGWFEKQIKSIGLSDVKETLYLSQIEDSGLWEMLPQGTRSLLVQPIVQVL 247

Query: 246 NQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF 283
             S NE++K  GF+L+ASS+ YA+ DKD+AWI ALA KF
Sbjct: 248 PSSDNEIQKSEGFVLLASSMRYAYGDKDKAWIGALANKF 286

BLAST of CmaCh18G012250 vs. NCBI nr
Match: gi|802769276|ref|XP_012090311.1| (PREDICTED: uncharacterized protein LOC105648509 isoform X1 [Jatropha curcas])

HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98
Identity = 186/279 (66.67%), Postives = 227/279 (81.36%), Query Frame = 1

Query: 6   LSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQ--LNLSVLRFTLGIPGLDES 65
           LS  PLI+L+  P+FRAK   KS VI +R+D+S+   N+Q  LNLS+LRFT GIPGLDES
Sbjct: 4   LSIHPLIQLNIRPKFRAKVTRKSLVIASRIDNSQTRENQQQELNLSILRFTFGIPGLDES 63

Query: 66  YLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV 125
           YLPRWIGYGFGSLLLLNHF+GS+SAA  +  QLRTEALGISLAAFSIALP+ G+FL+G  
Sbjct: 64  YLPRWIGYGFGSLLLLNHFLGSNSAA--SPPQLRTEALGISLAAFSIALPFFGRFLKGVR 123

Query: 126 PSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWN 185
           P  +A LP GAEQIF++S+N+ D  K+DLAWATY+LLRNTN+I+VLI IQG LCVRGYW 
Sbjct: 124 PMDQAALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTIAVLISIQGGLCVRGYWK 183

Query: 186 SPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNL 245
           +P+++S A LL WF +Q+ SIGL  L D+LYFPQ +ESGLW+ML KGTRS+LV+PV Q  
Sbjct: 184 TPDNLSKAQLLDWFLKQIDSIGLFDLRDTLYFPQTAESGLWEMLPKGTRSLLVEPVHQAR 243

Query: 246 NQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF 283
            +S NEMEKI GF+L+ASS+ YA+ DKDRAWIRA+  KF
Sbjct: 244 AKSANEMEKIEGFVLLASSMEYAYGDKDRAWIRAVTNKF 280

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CCB2_ARATH3.3e-8158.17Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LBA9_CUCSA8.1e-12782.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180340 PE=4 SV=1[more]
M5X1L8_PRUPE1.4e-9965.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009484mg PE=4 SV=1[more]
A0A067JER9_JATCU1.2e-9866.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26153 PE=4 SV=1[more]
W9RWP2_9ROSA3.6e-9864.97Uncharacterized protein OS=Morus notabilis GN=L484_015739 PE=4 SV=1[more]
F6HP63_VITVI7.7e-9364.87Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g00490 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G52110.11.9e-8258.17 Protein of unknown function (DUF2930)[more]
Match NameE-valueIdentityDescription
gi|659077375|ref|XP_008439172.1|1.5e-12984.51PREDICTED: uncharacterized protein LOC103484048 isoform X1 [Cucumis melo][more]
gi|449446061|ref|XP_004140790.1|1.2e-12682.04PREDICTED: uncharacterized protein LOC101219803 isoform X1 [Cucumis sativus][more]
gi|595864362|ref|XP_007211756.1|2.1e-9965.59hypothetical protein PRUPE_ppa009484mg [Prunus persica][more]
gi|645234628|ref|XP_008223895.1|4.6e-9965.59PREDICTED: uncharacterized protein LOC103323666 [Prunus mume][more]
gi|802769276|ref|XP_012090311.1|1.8e-9866.67PREDICTED: uncharacterized protein LOC105648509 isoform X1 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021325CCB2/CCB4
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0010207 photosystem II assembly
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G012250.1CmaCh18G012250.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021325Cofactor assembly of complex C subunit B, CCB2/CCB4PFAMPF11152DUF2930coord: 65..282
score: 1.1
NoneNo IPR availablePANTHERPTHR36403FAMILY NOT NAMEDcoord: 31..286
score: 3.7E

The following gene(s) are paralogous to this gene:

None