CmaCh18G006390 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G006390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coiled-coil domain-containing protein, putative
Location	Cma_Chr18 : 5821504 .. 5825758 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGTGACAACAGATATGTTGATGGGATGCGCCGAAAAGTTGTGTGACTGCAATCTGCAGGTTCTCTGATCGTTGGAGTTTCTCTCTTTCTCGGGCGCGTGTGTTGCAATGGAGGAATAGGGGAAATGTTGGGTGGTTGAGGGAGTAAATGGTGGGGGGTTTTTGAAGGGAGAAAAAGTTCCTCGTCCCTCTCCTTTCACGACGCCCGCCCCTCCATCTGCAAAGCTTCGCCGTGCCTCTCCACTGTCGCTCCATAATCCCTTCGATCCTTTTCATCTCTCGATCTCAGGTGTTCTTCTTAATTTCATGTTTTTTCTTTCAACATTTGTTGTATTATTATGGTTCGAATCAAATTCACTGGTTCGGTTGGATCCGATTTTTCTCGACAATGGACATTGGAAGTTCAATTGCTTCCCCCGAATCTCTTTCGACGTTCTCTGTTGTCTGGCTTATTCCAATTTCTCACTCCAATTTCATGCTCAATTGACTTCATGATTAAATTCATCTTGATTTTGAGTTTGCTTGTCCGATCCTGTTCGGTTGTGTTCTTCAGCTCAGTTCCGATTTAAACCTCTCCAGCTTATATTTGCTTTCATCTTGTGGGTTTTTTTTTTACTCTCTTCATTTGAACTTGTCGCAGCCCTAGATTGTGATTTCGTTGTTTTATTTTATTTCATTATTGCAAATTCAGTCATCATCAGCACTAGAATGTTCTCCATTAGTGTCCATGTTGTCCTAGACTCTGAATTGGGTTACTCGGTTTATAAATAACTACTCTACAAACTACATACATGTACTATGTTAGGAATCATAGATCTCCACAATGGTATGATATTGTCCCCTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGGTTTCCAAAAAGGCCTCGTACCAATGAAGATTGTATTCCTTGATTATAAACTCATGATCTTCCACTAAATTAGCCAACGTGGGATTATACTTTGTTCGACATTTGAGGATTTTATTGGCATGACTAAGTTTAGGGCATGACTCTGATATCATGTTAAATGAACACGACTCTCCACAATGGTATGATATTTTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGACTTCCCCAAAAGGCCTCATACCAATGGAGAAAGTATTCCTCACTTATAAACCCATGATCTTCCACTAAATTAGTCAACGTGGAACTTCCCTCCCAACAACCCTCCATCAACATATTAATGTCCTAATAATATCTTTAATATTCCCTAATTCCTTGTTTATTGATATTTAAGGCTAGCATACAACCATGGGCTGATCTGAGTTAGATGTCTTACTTTTTCAGACATTTTCTGTCTATATAATCTTTCCTAGGAGAAAATTGGTGTTTAATATGGAATCATTTTTTGTATGCTTTGTGCATCAATGAGTTACATTCATGTTTTCACAGGAACAGTTAGAGAGTAAAAATGAGGAAGTATGGCCTGCAGCTTAGTGTTAAGCTTATCACAACAGAAATAGCCTACAAGACTTCCCCTTCCTGCTCCTCTTATATTTCAAGACAGATGATGATAACGATGTTGAGAGAGAGATATCCCGCCAAGCTTCCAAGAATAAGGCGCTCAAGGATGTAAGCTAGCTTGTATTTTACTATTTTTCTCTTTGCTTGTTTGTACTTGTTCAATTGCTGTTGGAAATATGGAGCAAAGATAATGTCATTAACGAGAGTCTCGAGGTTGTATGCTAGCCTTATTTTATTTTTCCCTTTGAAAAATCGATTTAGATTGAGGAGCAACACAAGATAGCACTAAAAGAGGATCCGTCTTTTTTTTACTATGATGGAGTCTATGGTGCACGACATGAGAGTTCAACTACATTGCATTGCCAGAATCCATGCTGTATATTTGAAAGAGGTTGAAAGAAAAGGTTGTTCAACCTCGAGCGCATGATTGTGAAGAGAGAAAGGTATGTTCATCTTTTGGTCCCAACTTCGATCCTCGTAGATTTCAACTAGGACTTATAATCTAATTAGAATTAGAGGATTTCAAAATAACCTAATGGGTTCCTAATTAACATGAACTTGATTGTATTTAAGACAAAAGAACCTAAAACTTAATGAAACATAAAAAATGAAGTCTTATATAAAACCGAATATATGTACAAAAATACATGATCACCTTAATCTAATCCTACCACTCTAGTGAAAACACTTATTGACTCGCTGCATTTCTGTTGCAGCCGAAGTATATTCAAAATTTGCTCAAGAAGCCACAAGAACGAGAGAGAGAGAGCAGGAGGTGATATATGAAAGAAAACTGGCAAAGGAGAGAAGCAAAGATGATCATCTCTATGCTGGTAAGGACAGATTTGTCACTAATGCCTACAAAAAGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGTCTCCGACAACTTCGGGAGGAGAAAGAGGATGTATGTATAACTTTTTTAACCGTCTTTTTTACTTCGTTTTTAATTTTATAAATTCTTATTATTTGATAAGTTCCTTCTGTAGTGAAAAAATGATCAAGTGTAAGTTGTATCATGATCTCCCTAATTCTGATAACGGTTAGGAATGACGATTTTACACAATGGTATGATATTGTTTACTTTGAGCATACGCTCTCATGGCTTTTCTTTGAGCTCCCCCAAAAGGCCACATACCATTGGAGATGTATTCCTTACTTATAAACCGAGGATCATTTCTTAAGTTAGCCAATATGGAACTCCCTCCCAACAATTCTCAACCACTAGTTTGTTGATTTTATTGCAATTTTTGTCTAGAAGGTAGTAGTAAATCTGAGGTTTTCTGAATTAAAGAATTAGGAATGAATCAAATCTCCCTGAGTAGGATTCGATCCTACGACCAAATAAATTCTCTTCATATCCAACATTATGCTTTCTTTAATGTGTTTTTCCATCGGCAGGCACAAAGCTGATTGTTCTTTTTGTACTAATTTGAAGGTTACCAAGAAGAGTGACATTAGTGACCTTTACTTCAACCCTCAAAAGAATATTTCGTACGGTGCTGCTAATGTAGTCGAGCCGAGGGACCCTCCGAAGAAGCTTCAGTCAGAGAGGCAAGAAAAGAGTGTTACTGATACTTTTAACAACTGTCCATCATTGAATTCCTCCAATTTATCTTCCCAGTCAGCTAAGACGACAGAAAAGCATCCTCATCTTCAAGAAGAAGACCGTTTAGATTCAAGCAAAACAACACCATCTGATGTAGGAGGACGTACTAGCCCTCCTTCATTACAAGATAAAACTTCTTCAGTCCCGGAACGACCCATGCACGATGAAGGTGAACAACAACCTAAGCGTGATCAATAAAAGGAATGAGGATGCTGTCGCTGCAGCAAAAGAATGCTTTTTGGCTCGAAAAAGAGCAAAGAACGCTTATTGTTGTATTGAAAATTATGTCCTTAATGGTGAAGTTCGTCTTTGAGCTTTGGCTGTGACTTCACGTTTCTTTTTTCCATGTGAGATTCCTTGTGAGAGAAGCCCGAAGGAGTAGCTGCTCGACATCACCGACTTCTTCATCATCAAAAGTAAGTAAACACTTCCCCTTATAGGAACAAATATCGTGGCATCATCTGTTAACAGTCCACAACATGTATCTAGGTAGGCTCCTCTTCCATATCAAATAGGGCCTTATTTCTCGCATTTTTTTGTTATCACATGACGAATGCCTGCTTAAATTTAGGTAGTTCAATGGCCCCCCACACTTTGAAACTTGCACGTGATGATTGCACCGACCATCTGACATGTTTTTATTGCTGCATTAAATGATATAGAGCCTTGTGTGCGCAGATGAAATGGTGTTATTGAACACGTGATTTGGAACTTGGACATTGGACATGAACTCTCCTGCACGTCAAATGCATAAAGTAGGGAGCAAATCGTATAAAGTAGATCTTCCAAACTTTATGCTCAACTCTTTATCATCAGAATATGGAAAGATTCTGTTGGTTCCTTATCAAGAATGGTTAGGACCCAAAAACTGAAGCAACTTTGCTTTGTTTGGAGTTCCTATCAACACCACAGTGCTAGCTAGATGGTGATGCTTAACGCATACACGTCTATGAAGGTCTTGAAGTAGTGGGACTGTGACTGAACGGTTATTTCCTTGATCTTATCATTTCTTTTGCTATAAATAACACCTTTCCACCTTTCTTTCCATTGGGAGGGATTTTGGAACATTTACTGTTTTTAATCAAAGTTGTTTGATTATTAATTAGGTTAAG

mRNA sequence

ATGATAGTGACAACAGATATGTTGATGGGATGCGCCGAAAAGTTGTGTGACTGCAATCTGCAGGGAGAAAAAGTTCCTCGTCCCTCTCCTTTCACGACGCCCGCCCCTCCATCTGCAAAGCTTCGCCGTGCCTCTCCACTGTCGCTCCATAATCCCTTCGATCCTTTTCATCTCTCGATCTCAGATGATGATAACGATGTTGAGAGAGAGATATCCCGCCAAGCTTCCAAGAATAAGGCGCTCAAGGATATTGAGGAGCAACACAAGATAGCACTAAAAGAGGATCCGTCTTTTTTTTACTATGATGGAGTCTATGGTGCACGACATGAGAGTTCAACTACATTGCATTGCCAGAATCCATGCTGTATATTTGAAAGAGCCGAAGTATATTCAAAATTTGCTCAAGAAGCCACAAGAACGAGAGAGAGAGAGCAGGAGGTGATATATGAAAGAAAACTGGCAAAGGAGAGAAGCAAAGATGATCATCTCTATGCTGGTAAGGACAGATTTGTCACTAATGCCTACAAAAAGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGTCTCCGACAACTTCGGGAGGAGAAAGAGGATGTTACCAAGAAGAGTGACATTAGTGACCTTTACTTCAACCCTCAAAAGAATATTTCGTACGGTGCTGCTAATGTAGTCGAGCCGAGGGACCCTCCGAAGAAGCTTCAGTCAGAGAGGCAAGAAAAGAGTGTTACTGATACTTTTAACAACTGTCCATCATTGAATTCCTCCAATTTATCTTCCCAGTCAGCTAAGACGACAGAAAAGCATCCTCATCTTCAAGAAGAAGACCGTTTAGATTCAAGCAAAACAACACCATCTGATGTAGGAGGACGTACTAGCCCTCCTTCATTACAAGATAAAACTTCTTCAGTCCCGGAACGACCCATGCACGATGAAGGTGAACAACAACCTAAGCGTGATCAATAAAAGGAATGAGGATGCTGTCGCTGCAGCAAAAGAATGCTTTTTGGCTCGAAAAAGAGCAAAGAACGCTTATTGTTGTATTGAAAATTATGTCCTTAATGGTGAAGTTCGTCTTTGAGCTTTGGCTGTGACTTCACGTTTCTTTTTTCCATGTGAGATTCCTTGTGAGAGAAGCCCGAAGGAGTAGCTGCTCGACATCACCGACTTCTTCATCATCAAAAATGAAATGGTGTTATTGAACACGTGATTTGGAACTTGGACATTGGACATGAACTCTCCTGCACGTCAAATGCATAAAGTAGGGAGCAAATCGTATAAAGTAGATCTTCCAAACTTTATGCTCAACTCTTTATCATCAGAATATGGAAAGATTCTGTTGGTTCCTTATCAAGAATGGTTAGGACCCAAAAACTGAAGCAACTTTGCTTTGTTTGGAGTTCCTATCAACACCACAGTGCTAGCTAGATGGTGATGCTTAACGCATACACGTCTATGAAGGTCTTGAAGTAGTGGGACTGTGACTGAACGGTTATTTCCTTGATCTTATCATTTCTTTTGCTATAAATAACACCTTTCCACCTTTCTTTCCATTGGGAGGGATTTTGGAACATTTACTGTTTTTAATCAAAGTTGTTTGATTATTAATTAGGTTAAG

Coding sequence (CDS)

ATGATAGTGACAACAGATATGTTGATGGGATGCGCCGAAAAGTTGTGTGACTGCAATCTGCAGGGAGAAAAAGTTCCTCGTCCCTCTCCTTTCACGACGCCCGCCCCTCCATCTGCAAAGCTTCGCCGTGCCTCTCCACTGTCGCTCCATAATCCCTTCGATCCTTTTCATCTCTCGATCTCAGATGATGATAACGATGTTGAGAGAGAGATATCCCGCCAAGCTTCCAAGAATAAGGCGCTCAAGGATATTGAGGAGCAACACAAGATAGCACTAAAAGAGGATCCGTCTTTTTTTTACTATGATGGAGTCTATGGTGCACGACATGAGAGTTCAACTACATTGCATTGCCAGAATCCATGCTGTATATTTGAAAGAGCCGAAGTATATTCAAAATTTGCTCAAGAAGCCACAAGAACGAGAGAGAGAGAGCAGGAGGTGATATATGAAAGAAAACTGGCAAAGGAGAGAAGCAAAGATGATCATCTCTATGCTGGTAAGGACAGATTTGTCACTAATGCCTACAAAAAGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGTCTCCGACAACTTCGGGAGGAGAAAGAGGATGTTACCAAGAAGAGTGACATTAGTGACCTTTACTTCAACCCTCAAAAGAATATTTCGTACGGTGCTGCTAATGTAGTCGAGCCGAGGGACCCTCCGAAGAAGCTTCAGTCAGAGAGGCAAGAAAAGAGTGTTACTGATACTTTTAACAACTGTCCATCATTGAATTCCTCCAATTTATCTTCCCAGTCAGCTAAGACGACAGAAAAGCATCCTCATCTTCAAGAAGAAGACCGTTTAGATTCAAGCAAAACAACACCATCTGATGTAGGAGGACGTACTAGCCCTCCTTCATTACAAGATAAAACTTCTTCAGTCCCGGAACGACCCATGCACGATGAAGGTGAACAACAACCTAAGCGTGATCAATAA

Protein sequence

MIVTTDMLMGCAEKLCDCNLQGEKVPRPSPFTTPAPPSAKLRRASPLSLHNPFDPFHLSISDDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPCCIFERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQSERQEKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSPPSLQDKTSSVPERPMHDEGEQQPKRDQ

Homology

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BLAST of CmaCh18G006390 vs. Swiss-Prot
Match: NSRP1_RAT (Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-11
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DD+  V   + R+A+K +A++  + + + AL ED + + YD +Y    +        NP 
Sbjct: 35  DDEASVSESLQREAAKKQAMRQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEE---NNPK 94

Query: 122 CIF--ERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKL 181
            +   +R   Y     +A   R++EQE   E+K+ +ER  +   +  K+ FVT+AYKKKL
Sbjct: 95  LLMGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKL 154

Query: 182 AEQAKWMEEERLRQLREEKEDVTKKSDISDLY 212
            E+A+  E E+     E + DVTK+ D+S  Y
Sbjct: 155 EERAEEEEREKRAAALEARLDVTKQKDLSGFY 183

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BLAST of CmaCh18G006390 vs. Swiss-Prot
Match: NSRP1_BOVIN (Nuclear speckle splicing regulatory protein 1 OS=Bos taurus GN=NSRP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 69/231 (29.87%), Postives = 113/231 (48.92%), Query Frame = 1


Query: 61  SDDDND---VEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHC 120
           SDDD+D   V   + R+A+K +A+K  + + + AL ED + + YD +Y    +       
Sbjct: 33  SDDDDDETSVSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEE--- 92

Query: 121 QNPCCIF--ERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAY 180
            NP  +   +R   Y     +A   R++EQE   E+K+ +ER  +   +  K+ FVT+AY
Sbjct: 93  SNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAY 152

Query: 181 KKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKL 240
           KKKL E+A+  E ER     E + DVTK+ D+S  Y     N + G   V  P    ++ 
Sbjct: 153 KKKLQERAEEEERERRAAALEARLDVTKQRDLSGFY-RHLLNQAVGEEEV--PTCSFREA 212

Query: 241 QSERQE---KSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSK 284
           +SE +E   K  +D  ++   +   N   Q+    E++P    +    SS+
Sbjct: 213 RSEIKEEKSKGYSDEVSSESRIPPENCIRQTGVKVEENPDADSDFDAKSSE 257

[Close]

BLAST of CmaCh18G006390 vs. Swiss-Prot
Match: NSRP1_MOUSE (Nuclear speckle splicing regulatory protein 1 OS=Mus musculus GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.6e-10
Identity = 63/225 (28.00%), Postives = 109/225 (48.44%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DD+  V   + R+A+K +A+K  + + + AL ED + + YD VY    +        NP 
Sbjct: 35  DDETSVSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSVYDEMQKKKEE---NNPK 94

Query: 122 CI--FERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKL 181
            +   +R   Y     +A   R++EQE   E+K+ +ER  ++  +  K+ FVT+AYKKKL
Sbjct: 95  LLPGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMENGEFDDKEAFVTSAYKKKL 154

Query: 182 AEQAKWMEEERLRQLREEKEDVTKKSDISDLYFN-PQKNISYGAANVVEPRDPPKKLQSE 241
            E+A+  E E+     E   DVTK+ D+S  Y +   + +   AA     R+    ++ E
Sbjct: 155 EERAEEEEREKRAAALEAHLDVTKQKDLSGFYRHLLNQAVGEEAAPKSSFREARTVIKEE 214

Query: 242 RQEKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSK 284
           +      +T +       S +  + A+  E++P    E   +SS+
Sbjct: 215 KLRGYPDETNSESRPPQQSCVLQRGAQEAEENPDADREFDDESSE 256

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BLAST of CmaCh18G006390 vs. Swiss-Prot
Match: NSRP1_HUMAN (Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens GN=NSRP1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-08
Identity = 71/264 (26.89%), Postives = 115/264 (43.56%), Query Frame = 1


Query: 59  SISDDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQ 118
           S  DD+  V   + R+A+K +A+K  + + + AL ED + + YD +Y    +        
Sbjct: 33  SDDDDETSVSESLQREAAKKQAMKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEE---N 92

Query: 119 NPCCIF--ERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYK 178
           NP  +   +R   Y     +A   R++EQE   E+K+ +ER  +   +  K+ FVT+AYK
Sbjct: 93  NPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYK 152

Query: 179 KKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQ 238
           KKL E+A+  E E+     E   DVTK+ D+S  Y     N + G   V  P+   ++ +
Sbjct: 153 KKLQERAEEEEREKRAAALEACLDVTKQKDLSGFY-RHLLNQAVGEEEV--PKCSFREAR 212

Query: 239 SERQEKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSPP 298
           S  +E+      N   S N         +T  K     + D    +K++  D    T   
Sbjct: 213 SGIKEEKSRGFSNEVSSKNRIPQEKCILQTDVKVEENPDADSDFDAKSSADDEIEETRVN 272

Query: 299 SLQDKTSSVPERPMHDEGEQQPKR 321
             ++K    PE        Q   R
Sbjct: 273 CRREKVIETPENDFKHHRSQNHSR 290

[Close]

BLAST of CmaCh18G006390 vs. Swiss-Prot
Match: NSRP1_DANRE (Nuclear speckle splicing regulatory protein 1 OS=Danio rerio GN=nsrp1 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07
Identity = 70/308 (22.73%), Postives = 132/308 (42.86%), Query Frame = 1


Query: 37  PSAKLRRASPLSLHNPFDPFHLSISDDDNDVEREISRQASKNKALKDIEEQHKIALKEDP 96
           P  +  +++PL+  + F       SDD+  V   + ++A K K +K    + + AL+ED 
Sbjct: 13  PQKRASKSAPLARPSVFG----DDSDDETSVGESLQKEAIKKKMMKQTRLEMQKALEEDS 72

Query: 97  SFFYYDGVYG----ARHESSTTLHCQNPCCIFERAEVYSKFAQEATRTREREQEVIYERK 156
           + + YD VY      R ES+  L         ++   Y      A   R++EQE   ERK
Sbjct: 73  TVYEYDNVYDDIQKQRLESNKKLLGGE-----DKKPKYINQLLRAVEERKKEQERRDERK 132

Query: 157 LAKERSKDDHLYAGKDRFVTNAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYF 216
           + KER  +   +A K+ FVT+AY++KL E+ + +E E+     E   DV K+ D+S  Y 
Sbjct: 133 IQKEREAEGEKFADKEAFVTSAYRQKLKERQEELEREKREAELEAALDVKKQKDLSGFYR 192

Query: 217 N-----------PQKNI--------SYGAANVVEPRDPPKKLQSERQEKSVTDTFNNCPS 276
           +           P ++         S  A     P     + +SE +  S  D  +  P+
Sbjct: 193 HFLNQTVGEEVVPDRSAQSEEKATSSAAAERSPSPESTANRRESEAESHSDDDQVDVKPA 252

Query: 277 LNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSPPSLQDKTSSVPERPMHDE 322
            + +  ++ + +   +   L + D  D  +    ++  ++     +D+        M D+
Sbjct: 253 FSKTTANNHAKRQYRQKSPLSDSDDGDERERERKEIKEKSHKDRDRDRAKEKERERMRDK 311

[Close]

BLAST of CmaCh18G006390 vs. TrEMBL
Match: A0A0A0LJE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070270 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.7e-72
Identity = 172/274 (62.77%), Postives = 198/274 (72.26%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD+DVEREISRQASKNKALKDIEEQHK AL+EDPS F YDGVY    E        +  
Sbjct: 32  DDDDDVEREISRQASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKVVQPRAYDR- 91

Query: 122 CIFERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKLAE 181
              ER   Y +   +  + REREQE+IYERKLAKERSKDDHLYAGKD+FVT AYKKKLAE
Sbjct: 92  --EERKPKYIQNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTGAYKKKLAE 151

Query: 182 QAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQSERQE 241
           QAKWMEEERLRQLREEKEDVTKKSD+SD YF+ QKN++YGA N +EP  PPKKLQ E++E
Sbjct: 152 QAKWMEEERLRQLREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKE 211

Query: 242 KSVT-------------DTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLD-SSKTTPS 301
           K                DTFN+   L +SNL S S KT E+HPHL  E+RL  S+KTTPS
Sbjct: 212 KQTEVHILEKHEESCNGDTFND-HLLQNSNLPSCSEKTIEEHPHL--EERLPFSNKTTPS 271

Query: 302 DVGGRTSPPSLQDKTSSVPERPMHDEGEQQPKRD 322
           ++ G TSPP+L DKT  V E+P H++ EQ PK D
Sbjct: 272 NIEG-TSPPTLHDKT-PVQEQPKHEQSEQPPKSD 297

[Close]

BLAST of CmaCh18G006390 vs. TrEMBL
Match: A0A061GV10_THECC (Coiled-coil domain-containing protein 55, putative isoform 1 OS=Theobroma cacao GN=TCM_041289 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.0e-50
Identity = 136/266 (51.13%), Postives = 168/266 (63.16%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD+DVEREISRQASKNK+LK+IEEQH+ AL+EDPS F YDGVY    E       Q   
Sbjct: 33  DDDDDVEREISRQASKNKSLKEIEEQHRKALEEDPSVFDYDGVYDEMKEKVVRPRVQ--- 92

Query: 122 CIFERAEVYSKFAQEATRTRER---EQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKK 181
              +R E  SK+     +  E+   EQE++YERKL KERSK+DHLYA KD+FVT+AYKKK
Sbjct: 93  ---DREERQSKYIHNLIKKAEQRKWEQEIVYERKLVKERSKEDHLYADKDKFVTSAYKKK 152

Query: 182 LAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQS- 241
           LAEQAKWMEEERLRQLREEK+DVTKKSD+SD YFN  KN+++G AN V PR P K  +S 
Sbjct: 153 LAEQAKWMEEERLRQLREEKDDVTKKSDLSDFYFNLGKNVAFG-ANEVGPRMPEKHTESR 212

Query: 242 --ERQEKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSP 301
             E++++   D       L +SN    S  T          +  +S  + P  V     P
Sbjct: 213 KPEKKDEKEIDVIKRVQPLPNSNAPESSGVTDRTQDETSSRENFESQDSRPITVD--VLP 272

Query: 302 PSLQDKTSSVPERPMHDEGEQQPKRD 322
            +   +TSSV ++P  D    QPKRD
Sbjct: 273 ETALQETSSV-KQPSVD----QPKRD 284

[Close]

BLAST of CmaCh18G006390 vs. TrEMBL
Match: A0A0D2PQG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G124100 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.6e-50
Identity = 130/255 (50.98%), Postives = 161/255 (63.14%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD+DVE+EISRQASKNKALK++EEQHK AL+EDPS F YDGVY A  E       Q+  
Sbjct: 33  DDDDDVEKEISRQASKNKALKEVEEQHKKALEEDPSVFDYDGVYDAMKEEVVRPRAQDH- 92

Query: 122 CIFERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKLAE 181
              ER   Y     +    R+ EQE++YERKL KERSK+DHLYA KD+FVT+AYK+KLAE
Sbjct: 93  --EERKPKYILNLMKKAEQRKWEQEIVYERKLVKERSKEDHLYADKDKFVTSAYKRKLAE 152

Query: 182 QAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQSERQE 241
           QAKWMEEERLRQLREEKEDVTKKSD+SD YFN  KN+++G AN  +PR P  +   + +E
Sbjct: 153 QAKWMEEERLRQLREEKEDVTKKSDLSDFYFNLGKNVAFG-ANEAKPRKPELREPEKEKE 212

Query: 242 KSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSPPSLQDK 301
           K V +  N  P   S   S+   +T ++    +  D  DS   T   V       +  +K
Sbjct: 213 KEVLNRVNPLPDSVSPESSAVIDRTRDESSFREIFDSRDSKPITEDTVPDTAVQETTSEK 272

Query: 302 TSSV--PERPMHDEG 315
             SV  P+   H  G
Sbjct: 273 QPSVDQPKSDHHKRG 283

[Close]

BLAST of CmaCh18G006390 vs. TrEMBL
Match: A0A0D2QPK2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G124100 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-49
Identity = 130/256 (50.78%), Postives = 162/256 (63.28%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD+DVE+EISRQASKNKALK++EEQHK AL+EDPS F YDGVY A  E       Q+  
Sbjct: 33  DDDDDVEKEISRQASKNKALKEVEEQHKKALEEDPSVFDYDGVYDAMKEEVVRPRAQDH- 92

Query: 122 CIFERAEV-YSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKLA 181
              ER +  Y     +    R+ EQE++YERKL KERSK+DHLYA KD+FVT+AYK+KLA
Sbjct: 93  --EERKQPKYILNLMKKAEQRKWEQEIVYERKLVKERSKEDHLYADKDKFVTSAYKRKLA 152

Query: 182 EQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQSERQ 241
           EQAKWMEEERLRQLREEKEDVTKKSD+SD YFN  KN+++G AN  +PR P  +   + +
Sbjct: 153 EQAKWMEEERLRQLREEKEDVTKKSDLSDFYFNLGKNVAFG-ANEAKPRKPELREPEKEK 212

Query: 242 EKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSPPSLQD 301
           EK V +  N  P   S   S+   +T ++    +  D  DS   T   V       +  +
Sbjct: 213 EKEVLNRVNPLPDSVSPESSAVIDRTRDESSFREIFDSRDSKPITEDTVPDTAVQETTSE 272

Query: 302 KTSSV--PERPMHDEG 315
           K  SV  P+   H  G
Sbjct: 273 KQPSVDQPKSDHHKRG 284

[Close]

BLAST of CmaCh18G006390 vs. TrEMBL
Match: A0A0B0NEG8_GOSAR (Nuclear speckle splicing regulatory 1 OS=Gossypium arboreum GN=F383_10067 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-49
Identity = 136/286 (47.55%), Postives = 173/286 (60.49%), Query Frame = 1


Query: 36  PPSAKLRRASPLSLHNPFDPFHLSISDDDNDVEREISRQASKNKALKDIEEQHKIALKED 95
           PPS + + A+      P  P      DDD+DVE+EISRQASKNKALK++EEQHK AL+ED
Sbjct: 11  PPSQQKKPAT----RPPLPPPRGFQEDDDDDVEKEISRQASKNKALKEVEEQHKKALEED 70

Query: 96  PSFFYYDGVYGARHESSTTLHCQNPCCIFERAEVYSKFAQEATRTREREQEVIYERKLAK 155
           P  F YDGVY A  E       Q+     ER   Y     +    R+ EQE++YERKL K
Sbjct: 71  PCVFDYDGVYDAMKEEVVRPRAQDR---EERKPKYIHNLMKKAEQRKWEQEIVYERKLVK 130

Query: 156 ERSKDDHLYAGKDRFVTNAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQ 215
           ERSK+DHLYA KD+FVT+AYK+KLAEQAKWMEEERLRQLREEKEDVTKKSD+SD YFN  
Sbjct: 131 ERSKEDHLYADKDKFVTSAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDLSDFYFNLG 190

Query: 216 KNISYGAANVVEPRDPPKKLQSERQEKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQE 275
           KN+++G AN  +PR+P  +   + +EK V +  N  P   +   S+   +T ++    + 
Sbjct: 191 KNVAFG-ANEAKPREPELREPEKEKEKEVLNRVNLLPDSIAPESSAVIDRTRDESSSQEI 250

Query: 276 EDRLDSSKTTPSDVGGRTSPPSLQDKTSSVPERPMHDEGEQQPKRD 322
            D  DS   T   V     P +   +T+S  + P       QPK D
Sbjct: 251 FDSRDSKPITEDAV-----PDTAVQETTSEKQPP------DQPKSD 277

[Close]

BLAST of CmaCh18G006390 vs. TAIR10
Match: AT2G27285.1 (AT2G27285.1 Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-41
Identity = 114/287 (39.72%), Postives = 161/287 (56.10%), Query Frame = 1


Query: 37  PSAKLRRASPLSLHNPFDPFHLSISDDDNDVEREISRQASKNKALKDIEEQHKIALKEDP 96
           PS K + +S      P  P  +   ++D+DVE+EISRQA+K KA K+IEEQHK AL+EDP
Sbjct: 11  PSQKKQSSS----RPPLRPASIFDEEEDHDVEKEISRQATKTKAHKEIEEQHKKALEEDP 70

Query: 97  SFFYYDGVYGARHESSTTLHCQNPCCIFERAEVYSKFAQEATRTREREQEVIYERKLAKE 156
           S F YD VY    + +     Q+     ER   Y +   +    RE+E E++YERKLAKE
Sbjct: 71  SAFSYDEVYDDMKQKAVLPRMQDR---EERKPRYIQNLMKQAERREKEHEIVYERKLAKE 130

Query: 157 RSKDDHLYAGKDRFVTNAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQK 216
           R KD+HL++ K++FVT AYK+KL EQ KW+ EERLR+LREE++DVTKK D+SD YFN  K
Sbjct: 131 REKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLSDFYFNIGK 190

Query: 217 NISYGAANV----------------VEPRDPPKKLQSERQEKSVTDTFNNCPSLNSSNLS 276
           N+++GA  V                +E +   +KL+  R+E +  +     P    S  S
Sbjct: 191 NVAFGAREVEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVTRVEKKRKSPEKEVSPDS 250

Query: 277 SQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSPPSLQDKTSSVPE 308
            +   +  K     E ++  S K   SD G      S+++    VP+
Sbjct: 251 GEFGSSRSKSLEPLEAEQAVSEKEMGSD-GTEERKSSIKEAAKEVPK 289

[Close]

BLAST of CmaCh18G006390 vs. TAIR10
Match: AT2G27280.1 (AT2G27280.1 Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 161.8 bits (408), Expect = 7.2e-40
Identity = 103/243 (42.39%), Postives = 156/243 (64.20%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYG-ARHESSTTLHCQNP 121
           D++NDVE+EISRQASK K+LK IE+QHK A++EDPS F YD VY   +HE++        
Sbjct: 174 DEENDVEKEISRQASKTKSLKKIEKQHKKAIEEDPSAFAYDEVYDDIKHEAALPR----- 233

Query: 122 CCIFERAEVYSKFAQEATRT---REREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKK 181
             + +R E  S++ Q   +    RE+E E++YERKLAKER+KD+HLY+ K++FVT  +K+
Sbjct: 234 --MQDREEHKSRYIQHIMKQAERREKEHEIVYERKLAKERAKDEHLYSDKEKFVTGPFKR 293

Query: 182 KLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPK---- 241
           KL EQ KW+EEERLR+LREE++DVTKK+D+S+ Y N  KN+++GA + +E R+  +    
Sbjct: 294 KLEEQKKWLEEERLRELREERDDVTKKNDLSEFYINIGKNVAFGARD-IEAREAGRLKEL 353

Query: 242 ----KLQSERQEKSVTDTFNNCP----SLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTT 289
               +L+  R+E++  +     P    S +S +    S K+ +      +E+  ++ K T
Sbjct: 354 RKVDRLEELRKEETRKEKKRKSPEKEVSPDSGDFGLSSKKSVKPQDASIKEEAKETQKAT 408

[Close]

BLAST of CmaCh18G006390 vs. TAIR10
Match: AT1G55928.1 (AT1G55928.1 Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 155.2 bits (391), Expect = 6.7e-38
Identity = 99/244 (40.57%), Postives = 148/244 (60.66%), Query Frame = 1


Query: 58  LSISDDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTT--L 117
           L   ++DNDV++EISRQASK K+LK  EEQHK AL+EDP  F YD VY    + +    L
Sbjct: 34  LGEDEEDNDVDKEISRQASKTKSLKKFEEQHKKALEEDPCAFAYDEVYDDTKQEAPLPRL 93

Query: 118 HCQNPCCIFERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAY 177
           H +  C       +Y++  +E    R++E+E++YERKLAKER+K+ HL+  + + VT +Y
Sbjct: 94  HERQEC----NKPIYNQLMKEKADRRQKEREIVYERKLAKERAKEQHLFPDQVKVVTGSY 153

Query: 178 KKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANV--------VE 237
           K+KL E+ +W+ EERLR+L EEK+DVTKK D+SD YFN  KN+++GA ++         E
Sbjct: 154 KRKLEERDQWLSEERLRELGEEKDDVTKKKDLSDFYFNIGKNVAFGARDIKARETERLKE 213

Query: 238 PRDPPKKLQSERQEKSVTDTFNNCPSLNSSNLSSQSAKTTE--KHPHLQEEDRLDSSKTT 290
            R  PK    E +EK  T++       +S ++ S      E  +  H+  E++++S  T 
Sbjct: 214 QRKVPK--LEELREKMKTESPERVVLPDSRDIGSSCRIIVELQEAEHVASEEKMNSDATE 271

[Close]

BLAST of CmaCh18G006390 vs. NCBI nr
Match: gi|449470301|ref|XP_004152856.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 3.9e-72
Identity = 172/274 (62.77%), Postives = 198/274 (72.26%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD+DVEREISRQASKNKALKDIEEQHK AL+EDPS F YDGVY    E        +  
Sbjct: 32  DDDDDVEREISRQASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKVVQPRAYDR- 91

Query: 122 CIFERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKLAE 181
              ER   Y +   +  + REREQE+IYERKLAKERSKDDHLYAGKD+FVT AYKKKLAE
Sbjct: 92  --EERKPKYIQNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTGAYKKKLAE 151

Query: 182 QAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQSERQE 241
           QAKWMEEERLRQLREEKEDVTKKSD+SD YF+ QKN++YGA N +EP  PPKKLQ E++E
Sbjct: 152 QAKWMEEERLRQLREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKE 211

Query: 242 KSVT-------------DTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLD-SSKTTPS 301
           K                DTFN+   L +SNL S S KT E+HPHL  E+RL  S+KTTPS
Sbjct: 212 KQTEVHILEKHEESCNGDTFND-HLLQNSNLPSCSEKTIEEHPHL--EERLPFSNKTTPS 271

Query: 302 DVGGRTSPPSLQDKTSSVPERPMHDEGEQQPKRD 322
           ++ G TSPP+L DKT  V E+P H++ EQ PK D
Sbjct: 272 NIEG-TSPPTLHDKT-PVQEQPKHEQSEQPPKSD 297

[Close]

BLAST of CmaCh18G006390 vs. NCBI nr
Match: gi|659069555|ref|XP_008450616.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 4.1e-69
Identity = 164/266 (61.65%), Postives = 195/266 (73.31%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD++VEREISRQASKNKALKDIEEQHK AL+EDPS F YDGVY    E +      +  
Sbjct: 44  DDDDNVEREISRQASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKAVQPRAYDR- 103

Query: 122 CIFERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKLAE 181
              ER   Y +   +  + REREQE+IYERKLAKERSKDDHLYAGKD+FVT+AYKKKLAE
Sbjct: 104 --EERKPKYIQNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAE 163

Query: 182 QAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQSERQE 241
           QAKWMEEERLRQLREEKEDVTKKSD+SD YF+ QKN++YGA N +EPR  PKKLQ E++E
Sbjct: 164 QAKWMEEERLRQLREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPRATPKKLQLEKKE 223

Query: 242 KS-----VTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLD-SSKTTPSDVGGRTSP 301
           K      +     +C     ++   Q++KT E+H HL  E+RL  S+KTTPSD+ G TSP
Sbjct: 224 KQTEVHILEKHEESCNGDTFNDHQLQNSKTIEEHSHL--EERLSASNKTTPSDIEG-TSP 283

Query: 302 PSLQDKTSSVPERPMHDEGEQQPKRD 322
           P+L DK + V ERP H+  EQ PKRD
Sbjct: 284 PTLHDK-ALVQERPKHELSEQPPKRD 302

[Close]

BLAST of CmaCh18G006390 vs. NCBI nr
Match: gi|590586457|ref|XP_007015711.1| (Coiled-coil domain-containing protein 55, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 206.5 bits (524), Expect = 7.2e-50
Identity = 136/266 (51.13%), Postives = 168/266 (63.16%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD+DVEREISRQASKNK+LK+IEEQH+ AL+EDPS F YDGVY    E       Q   
Sbjct: 33  DDDDDVEREISRQASKNKSLKEIEEQHRKALEEDPSVFDYDGVYDEMKEKVVRPRVQ--- 92

Query: 122 CIFERAEVYSKFAQEATRTRER---EQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKK 181
              +R E  SK+     +  E+   EQE++YERKL KERSK+DHLYA KD+FVT+AYKKK
Sbjct: 93  ---DREERQSKYIHNLIKKAEQRKWEQEIVYERKLVKERSKEDHLYADKDKFVTSAYKKK 152

Query: 182 LAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQS- 241
           LAEQAKWMEEERLRQLREEK+DVTKKSD+SD YFN  KN+++G AN V PR P K  +S 
Sbjct: 153 LAEQAKWMEEERLRQLREEKDDVTKKSDLSDFYFNLGKNVAFG-ANEVGPRMPEKHTESR 212

Query: 242 --ERQEKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSP 301
             E++++   D       L +SN    S  T          +  +S  + P  V     P
Sbjct: 213 KPEKKDEKEIDVIKRVQPLPNSNAPESSGVTDRTQDETSSRENFESQDSRPITVD--VLP 272

Query: 302 PSLQDKTSSVPERPMHDEGEQQPKRD 322
            +   +TSSV ++P  D    QPKRD
Sbjct: 273 ETALQETSSV-KQPSVD----QPKRD 284

[Close]

BLAST of CmaCh18G006390 vs. NCBI nr
Match: gi|823123751|ref|XP_012477249.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Gossypium raimondii])

HSP 1 Score: 206.1 bits (523), Expect = 9.4e-50
Identity = 130/255 (50.98%), Postives = 161/255 (63.14%), Query Frame = 1


Query: 62  DDDNDVEREISRQASKNKALKDIEEQHKIALKEDPSFFYYDGVYGARHESSTTLHCQNPC 121
           DDD+DVE+EISRQASKNKALK++EEQHK AL+EDPS F YDGVY A  E       Q+  
Sbjct: 33  DDDDDVEKEISRQASKNKALKEVEEQHKKALEEDPSVFDYDGVYDAMKEEVVRPRAQDH- 92

Query: 122 CIFERAEVYSKFAQEATRTREREQEVIYERKLAKERSKDDHLYAGKDRFVTNAYKKKLAE 181
              ER   Y     +    R+ EQE++YERKL KERSK+DHLYA KD+FVT+AYK+KLAE
Sbjct: 93  --EERKPKYILNLMKKAEQRKWEQEIVYERKLVKERSKEDHLYADKDKFVTSAYKRKLAE 152

Query: 182 QAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQKNISYGAANVVEPRDPPKKLQSERQE 241
           QAKWMEEERLRQLREEKEDVTKKSD+SD YFN  KN+++G AN  +PR P  +   + +E
Sbjct: 153 QAKWMEEERLRQLREEKEDVTKKSDLSDFYFNLGKNVAFG-ANEAKPRKPELREPEKEKE 212

Query: 242 KSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQEEDRLDSSKTTPSDVGGRTSPPSLQDK 301
           K V +  N  P   S   S+   +T ++    +  D  DS   T   V       +  +K
Sbjct: 213 KEVLNRVNPLPDSVSPESSAVIDRTRDESSFREIFDSRDSKPITEDTVPDTAVQETTSEK 272

Query: 302 TSSV--PERPMHDEG 315
             SV  P+   H  G
Sbjct: 273 QPSVDQPKSDHHKRG 283

[Close]

BLAST of CmaCh18G006390 vs. NCBI nr
Match: gi|728829958|gb|KHG09401.1| (Nuclear speckle splicing regulatory 1 [Gossypium arboreum])

HSP 1 Score: 202.6 bits (514), Expect = 1.0e-48
Identity = 136/286 (47.55%), Postives = 173/286 (60.49%), Query Frame = 1


Query: 36  PPSAKLRRASPLSLHNPFDPFHLSISDDDNDVEREISRQASKNKALKDIEEQHKIALKED 95
           PPS + + A+      P  P      DDD+DVE+EISRQASKNKALK++EEQHK AL+ED
Sbjct: 11  PPSQQKKPAT----RPPLPPPRGFQEDDDDDVEKEISRQASKNKALKEVEEQHKKALEED 70

Query: 96  PSFFYYDGVYGARHESSTTLHCQNPCCIFERAEVYSKFAQEATRTREREQEVIYERKLAK 155
           P  F YDGVY A  E       Q+     ER   Y     +    R+ EQE++YERKL K
Sbjct: 71  PCVFDYDGVYDAMKEEVVRPRAQDR---EERKPKYIHNLMKKAEQRKWEQEIVYERKLVK 130

Query: 156 ERSKDDHLYAGKDRFVTNAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDLYFNPQ 215
           ERSK+DHLYA KD+FVT+AYK+KLAEQAKWMEEERLRQLREEKEDVTKKSD+SD YFN  
Sbjct: 131 ERSKEDHLYADKDKFVTSAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDLSDFYFNLG 190

Query: 216 KNISYGAANVVEPRDPPKKLQSERQEKSVTDTFNNCPSLNSSNLSSQSAKTTEKHPHLQE 275
           KN+++G AN  +PR+P  +   + +EK V +  N  P   +   S+   +T ++    + 
Sbjct: 191 KNVAFG-ANEAKPREPELREPEKEKEKEVLNRVNLLPDSIAPESSAVIDRTRDESSSQEI 250

Query: 276 EDRLDSSKTTPSDVGGRTSPPSLQDKTSSVPERPMHDEGEQQPKRD 322
            D  DS   T   V     P +   +T+S  + P       QPK D
Sbjct: 251 FDSRDSKPITEDAV-----PDTAVQETTSEKQPP------DQPKSD 277

The following BLAST results are available for this feature:

BLAST of CmaCh18G006390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NSRP1_RAT	1.7e-11	32.24	Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus GN=Nsrp1 PE=1...	[more]
NSRP1_BOVIN	1.1e-10	29.87	Nuclear speckle splicing regulatory protein 1 OS=Bos taurus GN=NSRP1 PE=2 SV=1	[more]
NSRP1_MOUSE	5.6e-10	28.00	Nuclear speckle splicing regulatory protein 1 OS=Mus musculus GN=Nsrp1 PE=1 SV=1	[more]
NSRP1_HUMAN	6.8e-08	26.89	Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens GN=NSRP1 PE=1 SV=1	[more]
NSRP1_DANRE	1.5e-07	22.73	Nuclear speckle splicing regulatory protein 1 OS=Danio rerio GN=nsrp1 PE=1 SV=2	[more]

BLAST of CmaCh18G006390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJE9_CUCSA	2.7e-72	62.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070270 PE=4 SV=1	[more]
A0A061GV10_THECC	5.0e-50	51.13	Coiled-coil domain-containing protein 55, putative isoform 1 OS=Theobroma cacao ...	[more]
A0A0D2PQG7_GOSRA	6.6e-50	50.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G124100 PE=4 SV=1	[more]
A0A0D2QPK2_GOSRA	7.2e-49	50.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G124100 PE=4 SV=1	[more]
A0A0B0NEG8_GOSAR	7.2e-49	47.55	Nuclear speckle splicing regulatory 1 OS=Gossypium arboreum GN=F383_10067 PE=4 S...	[more]

BLAST of CmaCh18G006390 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27285.1	2.2e-41	39.72	Coiled-coil domain-containing protein 55 (DUF2040)	[more]
AT2G27280.1	7.2e-40	42.39	Coiled-coil domain-containing protein 55 (DUF2040)	[more]
AT1G55928.1	6.7e-38	40.57	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

BLAST of CmaCh18G006390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470301\|ref\|XP_004152856.1\|	3.9e-72	62.77	PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis sativus]	[more]
gi\|659069555\|ref\|XP_008450616.1\|	4.1e-69	61.65	PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis melo]	[more]
gi\|590586457\|ref\|XP_007015711.1\|	7.2e-50	51.13	Coiled-coil domain-containing protein 55, putative isoform 1 [Theobroma cacao]	[more]
gi\|823123751\|ref\|XP_012477249.1\|	9.4e-50	50.98	PREDICTED: nuclear speckle splicing regulatory protein 1-like [Gossypium raimond...	[more]
gi\|728829958\|gb\|KHG09401.1\|	1.0e-48	47.55	Nuclear speckle splicing regulatory 1 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018612	DUF2040

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006390.1	CmaCh18G006390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018612	Domain of unknown function DUF2040	PFAM	PF09745	DUF2040	coord: 85..204 score: 6.7
None	No IPR available	unknown	Coil	Coil	coord: 177..204 scor
None	No IPR available	PANTHER	PTHR30060	INNER MEMBRANE PROTEIN	coord: 62..227 score: 6.2
None	No IPR available	PANTHER	PTHR30060:SF0	COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 62..227 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G006390	CmoCh13G003680	Cucurbita moschata (Rifu)	cmacmoB395
CmaCh18G006390	Lsi02G011940	Bottle gourd (USVL1VR-Ls)	cmalsiB369

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G006390	CmaCh13G003450	Cucurbita maxima (Rimu)	cmacmaB211

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G006390	Watermelon (97103) v2	cmawmbB394
CmaCh18G006390	Cucurbita maxima (Rimu)	cmacmaB214
CmaCh18G006390	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G006390	Cucumber (Gy14) v1	cgycmaB0884
CmaCh18G006390	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G006390	Wild cucumber (PI 183967)	cmacpiB403
CmaCh18G006390	Cucumber (Chinese Long) v2	cmacuB399
CmaCh18G006390	Melon (DHL92) v3.5.1	cmameB367
CmaCh18G006390	Melon (DHL92) v3.5.1	cmameB369
CmaCh18G006390	Watermelon (Charleston Gray)	cmawcgB341
CmaCh18G006390	Watermelon (97103) v1	cmawmB383
CmaCh18G006390	Watermelon (97103) v1	cmawmB386
CmaCh18G006390	Cucurbita pepo (Zucchini)	cmacpeB413
CmaCh18G006390	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G006390	Cucurbita pepo (Zucchini)	cmacpeB418
CmaCh18G006390	Cucumber (Gy14) v2	cgybcmaB092
CmaCh18G006390	Cucumber (Gy14) v2	cgybcmaB095
CmaCh18G006390	Silver-seed gourd	carcmaB0000
CmaCh18G006390	Cucumber (Chinese Long) v3	cmacucB0468
CmaCh18G006390	Cucumber (Chinese Long) v3	cmacucB0473
CmaCh18G006390	Cucumber (Chinese Long) v3	cmacucB0476