CmaCh17G013580 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G013580
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Electron transporter/thiol-disulfide exchange intermediate protein
Location	Cma_Chr17 : 9080175 .. 9088329 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAGTGAGTTTGAGATAGGTCACAGCAAATTAACAGGAGGAGGAAGAAGGAGAGCTTCAACTTTGAAATAGATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTCCTCATCGCACTCTTTCCTCTTCCTTCAAACCTCCTGTTTTATCCCTCCCTTTTTACAACGCCTGCGCTTCCAAATCCATTTCAATCTCCAAACACAATGCCCTCAAAAATGGATCCGCGAGGATCAGACCTATGTCGATTAGAGCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTTTCGATTTCCTTCGTGTTTTCTTTCCTTTTCCAGATTTGGGTTTCTTGAGTTTACTGGAAATATTTTGAAGCCGGATCGTTCGTTGGCAATCTCTTTTTTGAAGGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTACTTTTTCTTCGATTCTTATTACACTTGCTGGTAGATTTGCTCGAGGGGATCTGAGTACTGAAATCACCTTTTCTTTTTCCCTCTATGACGATAACTGCCATTCCTGTCATATGTTCTTACTATTAACTTAAATTTTTGGATTAAGTTGTAAGTTAAGGGGTTGAGGATGGTTGGGAGAGGAGTCCCACATTGACTAACCAAAGGGAAGATCATGGGTTAGTAAGGAATTCTATCTTCATTGGTACGAGATTCGTGGTTCCTAACATGGTATCATAGCATGTCCTTAACTTAGACATGTCAATAAAATCCTCAAGTTTCGAAGAAAGAAATTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTATTGAACAAAGGGGTGTAATTTGTTCGTGGGCTCCAAAGAACGAGTCCAACCTCAATTAAGGGGAGATTGTTCGAGGGGAGGATTGTTGGGAGAGGAGTCCCACATTGACTAATTAAGGGGAAGATCATGAGTTTATAAGTAAGAAATTTCATTGGTATGAGTGCTTTTGGGGAAACCAAAAGCAAATCCATAAGAGCTTATGCTCAAAGTGAACAAGATCATGCCATTGTGGAGATTCGTGGTTCCTAACATGATATCAGAGTCATGGTATCAGAGTCGAGCCTTGATTAAGGGGAGGCTGTTCGAGGGGAGGATTGTTGAGGATTGTTGGGAGAGGAGTCACACATTGGCTAATTAAGGGGAAGATCATAAGTTTATAAGTAAGAAATACTAACTTCATTGGTATGAGGCCTTTTCGAGAAACCAAAAGAAAAGCCATGAAAGAGCATTTAAAGTGGACAATATCATACCATTGTGGAGATTCGTGGTTCCTAACATTAATATATACCTGGAGATGCTCAATTTAAGCCCAATTCAACCCCTGTATGTTACTTCCGAATTCATGATGTTACATGTGTTGGTTTGTATGAATCAAATTGATATCCTTGAGCTATTTGCTTTGATTTAAACCATCATGAGTCTTTCATTGCATTTAATGTCTTCTCTTAAATCTTTTTATGCATCTTGTAAGCTGACAAGTTTTTTCCCTTCAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACGGGACAACATACGGTACCAAATGTTTTCATAGGTTAGTATTGCTTAATCACAATTATCAATCTTATGTATGTTGAAAATATTATCATTTTATGTTTACGTGGTTCTCTGTTTTAGTTATGAAACTTTCTCATTTTATTTACGATATCTTCTGTAATGAACAATCATTTGATATGTACAAAAACATTGCTTTTAATAGAGATTTTGCGTCAATCTTCACTGAATACCTCTACTTATGATCCTGATCATACCCCTTGGTTCAATATAACCATCTAGAAATAATACGGTTGTGTATATGCTGAGAGCAGAAGCATATAGAGGGGTTTAATTTTGGATTTTCGGTCTCAGTAAATAAGTAGAGCACGACGTGTTAGACCCTCTGATCGGGGGACACGTGACTTGGCTCTATGTGTCTTACCTGAGTCTAGATCTGATCATGTATGGGGTGGCACACTCAAAAGGATGGGTCCAAGGAAGGTGGCAACATTTACGCGTAGTAGGTGGTTGTCGCCTCTGACAATTGCACGAATGAATGCTGCTTGTTAAGAGACAAAGACACTTTAGTTTGAGTATTGTGTCTATGTCCATATCCATGCTTCTTAGTTTGTGTATACATACTTTGTTCTTGGACTGGAAGCAAGTGATTTTATATATGAAGTTTGAAAATGGGATAGGAAGATCCTTTTTCCAATCTTTACTCATATTTTTTCGTGTTTATGAATGGATTGCTCTACAATCCACAAGCATGCTTACTAATAGGGGAAGCGCCTCAGCTTCGCATCATCCCCGATATATATTTGTGAAGAACCTCAATGAACTAACTACTCACTGCTCGAGCTTACGTTAGTCGTAGAAACCGCTCACTACTATGTACTAAGTTTCTTCCTTCTCTCCATGTCTTTCTTGTTTTAGGAGACGGTGGAGGTTTTTTGACCCACCACTGATTTAAACCACAATACTCTAGCTTTGCCTCTAGAAAAGGTCCATGGAAGAGTTGAAAATGCCTCGGAGCACATCTTAGCAAACCTATATCAGCCCATCAATCAACAAAGATTTGAATAATGACTGACTCATTTTTGAGCCTACGAAAGGAAATTTCATTAGAATATATAACAAATGCACGTACTATCCACGTAGATAGAAATCCCTCACCCCTCATCATATTTTTGAGTCATAGTAAGGAAGCCGGTTTGGAAGTTCATAAAATATATGAATTATGAGCGCCCCCACCCCCCGTGTTTAAAAATACTGCCCCTTTGTGTTGTTTCGAATATCGACTACCGTTCTATTTCATGTAGTCTCGTCATCTAAAGATTTTTCGATCTAGTTTGGTTTGTATCGCTTATTCTTGGATGCGTACCAAGTATTGTTTAAACTCACATACCTCTTTTTGTGGTCAGGGGGCAAGCACATAGGCGGTTGTACAGGTACATTTTTTTTTTTTTTTTTACCAAAGCTTTCATTCAATGGAAACATACATTGCTTGCTTCACTTATATTGATTATCGATGTTGCTTGTGCTCGCCGTTGTGATGCAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTCTTCTATCTGAAGCGAATGCTAAAAATACAGAGACATAAGGCTCTAGGCACATTTTGTTTTCTTAGCCATTTGCTGACTGACCTGTTGATTTTCTTAATTCTACCTCGAGTGACACTTGCGTTTCTAGTTAGGAACATGTATTTTAAGATATTTGTGGATGCATTTGTTTCAAGGAAGGATCTCCAGTTTATGCATGAAATAAGAGAGCATTTTATTCCCATTTGGAAAGAAAAGCCTTCCATTTCCCCGGTCCAGGCTCCCTTTTCTGTCTATGCTATGCTCGTATGGCGTAGGCTTACCACGTTCCGCGCCTATAATGTTTTTGCCGAACGGTCTTTGCCAGTAGCGTTATCCTCTCTACTGGCTGTATGGTCTAGTTGTTTCGTGTTGTTTTTAAGGTATTTAGATGTTTTTGCAACACTTTGAGGTATTTTACAATCAATCTTCTGAAAGTAGGAGTTCGGAGTCCATCGAGGAGTTTTTTTTTTTTTAGATTTTAATTTCTAAAGAAATATTTACGTAATTAGATTTCATCTATTATTTAGTAACATTTGAATATTTACATGCAAATTGATTTTATTAATTTATTTACTTTATTATACTGAGACTTTCAAATTATTTAAATTTTATTTCTCAATTTTGAAATTACATTAAATAAAAATATATTCCACCATTTTAGCATATTAATTTAATTACTCATTTTATTCTATGACTCTCCATTTGGCTATTTAGTACCATATTTATTTTTTAATAACTCTACTTTCTAAAATTAAATTAAATCTATCTATTAATTAATTAATTAAAATTAATTATCTAAGTAAAATTTTTTACACGTTCTTGAAAGCGCTGTGTTCTCCTTGTTATGTACCACCATTTTGGCGCCCAAGTTTTTCTTTCCACAGAAACCACAATCCCTCGTTTACAGGGCGCGCATTACCATGAAGCGTAATCTCAAGCCGTCCATTTCTACTGGTTCTTCTTCGATTCTTCCTTATCATGTTTTTGAGTTTCTTTAATTTTGATATATTGCTGTTGCTTTGATTCTCGATTACACATCATGCTTTCCCCCGTTTAATTTTTTAGTATTTTTTTCAAGACTTTTGTTCCTGAGAGGATCGATTTTGTTTGTTGCCACTATTCTTAATAATTTCATTCCGGTTCCAATGTATTTAAGTTACTATTGTGGTTTAGTTCGAATTCGTTGTCTCGATGGATTTCATTTCTGGCCAATTATAGCCCAACTTCTAATGAATGTTTGATGTTGTGTTATCTTTTTCTCTCACGTAATTTTGTATATTCTGTCGTGAGAAGCCGGAAGTGATCTTGTATGTACTCCTGTTGTTCTTTAAACTGCATGTAAAAATGCCTTAATTGACTACATGTCCAATATTTTGATCAGAAATGTCTCTCCTGTACTCCGCTATCGTTTGCTTTCTTCATCGAGTTTGTTGGGAGTTTGACCAAAGTCCCAAATAATGAGCATATAAGTAGATAATAATGCAATGAGACCTCTCATAAGAAATCATAAGGCTTATGTTCAAAGTGGACAGTATCATATCACTGTGGGGATCCATTGTCTTAATAAAAATTCATCTTTATATATAAACCTCAAGATGTCATATTGATACCCTTGCGAATGCAAGAACACTCATTTTAGTCAGGTTCCACATTAGCGACAAGGATAAGTTTCACTGCGTATGAAGTAACGTTTAAACCATAGAAGCTACATTTGCTATTGTGTGACTACGTTTTGCAGTTATCCTTGTTTTCTCTAAATTGTTTCAGGAAGTGAATTTCTACTTTGTAAAATTAAATGATTTCAAAAGTTTCTTCACTTAAAATAATAATTTTGATAAATCCTGCATGAACATTCCTTATAGATAGTATCTGTCGGAAGAGAATAAAAGTTGGAGACCTTGATTGTGATAGACCTTTGACATGCAGAAGAGATACTTCTCCCGTATCCTTGAAAGAAGGACATGTTACATGCCGTGAGTTTTCTACATTACCCAACTCTCAATTGTACTTTCCTAGAGTAGCGAGCTATTCGAGGCTCCCAGTGTTAACAGTTCTCTTTGTCTTTTTTTTCTTTTTTGAGTTTTGTTCTAGCTAAGTTTCTTATTGTATTAGTGCATGATCCTTGTTAAATAGTTCAATTGTTGATATGTTTTCTTGTATGGGAGCGATGGCAGCAAATAATGCAAAAACTTCGGAGTTTGCATTTTTTAAGAAGTTCAAGGATGCAAACCGTAGATTCAGTTCATCTCTTCAACGTCAAAAGGAACTTCAATCCAAGGAGTTCAACTCGACTGATCATTTCAGAGGTAAGACATAAACTTTAATTGCAATATCAGTGTTAGCAGCAAATATATATATATCTATATTTATATTCTTTGGGATGTGAAAACGTGGATCTTTTTAAGAACTATACTTTCAGTGTCTGCCTTATCTGCACATGTGAGGCTAAGACCTTCCACTCAGCTCAATGTTGACATGTATTTTTTCTTCAAGTTTAACCCATTCTTGGAATCGACCATAAAAAAGATAATAACAATATCTCCCAATAAAAGTTGGAAGTAACGTGTAACTTGTACCCATTATTTTGTTTCCAAGCAGAGAGAGCAAGGCATGTTGAAAATCGCCGTGAAGACTTCGCATCACATCCTTTTGTTGAGAATGTCACTCCTATTAACTTTAACTCGATGCATTTACCCCTGGGTAATTCATCCAAAATTTCAGGTATGCACTTAAAGCAGACACTCGTTAATATTTGATATTCCCTTTTCTGTTAATTCATCCTGACATGAGATTGAACGAAGATGTATAATTAAGTCGTCCCGAGTATTCTGTAACTCTATACTACGTATAGGAAAAATACATTTTCATCCATGTACTGAACTAAGACATTATGAGTTGTCAATACAAAATGAGTCGGAGATTTTCTTTCACATATCGCATGTATCAGTGTAATGTCTCTCAATTTGTTTATCGATATTTGGGTTTGCAGTACATGATGAAATGAGATCCCACAGGAAAACAAAACAGTTTCCAAATAGTAATTTGTGCTCTTTGTTTTATTGCAGAGGTAGATGTGAAGCACGCTCATAAAACATTTAAGGATATACAGAGCAAACAGAGAAACGTGGAAAATGATGGTAATTCTTTCGTCTGAGTTTCGTTCTCTCTCTTTTTCTTGCTTATTTTTTTTTTAAAAAAAAAATAGAGAATCACAATTTTGAGTTCTTATGAGCAAATGTTTCGTCTTTTGTGTATGCATATATTTCTTATCATTTTCCAATGGTTTCTTTTTTGGTCCATTTTTGCATTCTCAACAGAGTTGGGGAGCCTTGATCTTATAGTCTTAAAAAGTTCCGAGCCATGTTCGTTAATGTGTAATGCATTCATTTAGTGGTCTACATCAGAAAGATAGATGGGATAGTCATGATAGCATATTTGATCAGGTACTCTTCATATTCATGCAGATATTTTTAGTAGGAAGAGGCAGAAATTACGTCAGTTCATTCAGAATATGTCGTTCCATGGAACTGGTGAATCATATGAGAAGAGGTCAGAGTCATCTTTGTTCTATCTGTTGTCCCGTCATCTTTCTGGATCCGACTATGGAATTTTTTGGAACTTGTCCAGGTATGGTGTTATTTCCACTCTACTTAGTCGGCTTATACCTGAAAGCAATCAGTATAAGGTATTATGCACTTTTACCATCTTCCAATAACTTCAACTTTTTTTTTTTCTAATTCTTTTCTGAATTACTGGCTTTAGAATGAACCTGATTCTCGACAGTTTAATAATAACTTGGAAAAACTACAATGGTTGCCTGGAAGGTGCTGGCCAAGGCTTGATTATGAGCATCGTTTGAATAATAGTTCATCGCCTTGTCGTTTGAATAAATCAAGAGGCAGAGTTCTTTTCCACTCTGATTTCTCAACCAATAACGATGATGACAACTTCCACGTTAAGTACAGGACCAAGGACTTTGACAGTGATGTAGAAGGGAAAATGACTTTGCTTGATGCCAATAGTTCACCTAGTACTGCTGCAGTTGAAAACTATAGATCACTTATCAACCTTTTCAACCCGCAATACGGTTTCTATGATCAAGGTGAACCTTTGCACATAAGGAAGCAAGAGATGGAACCTCTTCTGCTGGGTTGGGATACGGACGACATAAAAGATGACAGTTCTAAAGTTACAGAGTTCCACACATTTGCTGAGCCACCAATTTCGTTCGCTGATGACCATCAGCCAAACTTGCAGGAGAGTTTTGGAGCTGTTGCACTATGTTCATCCCCTTTCCCTTCCAGTTATCATAGAAACTTATATCCATTGCCATACTCCAGTTTAGACAGCTATCAAATCCATGGGTTAAGTAGGCATAATGTAGAAAAAGAGGAAGGTATAGACGCCACTTTCAACAACGTGCATTTGAATTTCTCATCTGTACCCAAATGTCTTAGTCAGTGCGATAACTATGTCGAAGACCGTGGCTTCTTCTGTGCACAAAGTGCTAATTGGCTTATGAATTATGCATCGAATGACGAACACCGGCATCCTTCTTTAGAAAGTATGTGTGCTTCTGGCTTTGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAGCACTGCCAAACAGCTTACCATCTACTTGAGTACCCACTGGATGAAATGAGACCAACATCCCCTGTCAATGAAGAATGTAATATTGACAGTTCAGAATATCGACAGCCCTTCTTCATCCAACCCGAGTCATTCTTTCAAGAAGGGAAGAAGGTACGCTCTCTACTGACTGATAAACTTAGCTGGGATGTCACTAGAAGTGAAATAAATGTCGCTATAACTGAAATGGATTACGTTTGA

mRNA sequence

GGGAGTGAGTTTGAGATAGGTCACAGCAAATTAACAGGAGGAGGAAGAAGGAGAGCTTCAACTTTGAAATAGATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTCCTCATCGCACTCTTTCCTCTTCCTTCAAACCTCCTGTTTTATCCCTCCCTTTTTACAACGCCTGCGCTTCCAAATCCATTTCAATCTCCAAACACAATGCCCTCAAAAATGGATCCGCGAGGATCAGACCTATGTCGATTAGAGCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACGGGACAACATACGGTACCAAATGTTTTCATAGGGGGCAAGCACATAGGCGGTTGTACAGATAGTATCTGTCGGAAGAGAATAAAAGTTGGAGACCTTGATTGTGATAGACCTTTGACATGCAGAAGAGATACTTCTCCCGTATCCTTGAAAGAAGGACATGTTACATGCCCGATGGCAGCAAATAATGCAAAAACTTCGGAGTTTGCATTTTTTAAGAAGTTCAAGGATGCAAACCGTAGATTCAGTTCATCTCTTCAACGTCAAAAGGAACTTCAATCCAAGGAGTTCAACTCGACTGATCATTTCAGAGAGAGAGCAAGGCATGTTGAAAATCGCCGTGAAGACTTCGCATCACATCCTTTTGTTGAGAATGTCACTCCTATTAACTTTAACTCGATGCATTTACCCCTGGGTAATTCATCCAAAATTTCAGAGGTAGATGTGAAGCACGCTCATAAAACATTTAAGGATATACAGAGCAAACAGAGAAACGTGGAAAATGATGATATTTTTAGTAGGAAGAGGCAGAAATTACGTCAGTTCATTCAGAATATGTCGTTCCATGGAACTGGTGAATCATATGAGAAGAGGTATGGTGTTATTTCCACTCTACTTAGTCGGCTTATACCTGAAAGCAATCAGTATAAGAATGAACCTGATTCTCGACAGTTTAATAATAACTTGGAAAAACTACAATGGTTGCCTGGAAGGTGCTGGCCAAGGCTTGATTATGAGCATCGTTTGAATAATAGTTCATCGCCTTGTCGTTTGAATAAATCAAGAGGCAGAGTTCTTTTCCACTCTGATTTCTCAACCAATAACGATGATGACAACTTCCACGTTAAGTACAGGACCAAGGACTTTGACAGTGATGTAGAAGGGAAAATGACTTTGCTTGATGCCAATAGTTCACCTAGTACTGCTGCAGTTGAAAACTATAGATCACTTATCAACCTTTTCAACCCGCAATACGGTTTCTATGATCAAGGTGAACCTTTGCACATAAGGAAGCAAGAGATGGAACCTCTTCTGCTGGGTTGGGATACGGACGACATAAAAGATGACAGTTCTAAAGTTACAGAGTTCCACACATTTGCTGAGCCACCAATTTCGTTCGCTGATGACCATCAGCCAAACTTGCAGGAGAGTTTTGGAGCTGTTGCACTATGTTCATCCCCTTTCCCTTCCAGTTATCATAGAAACTTATATCCATTGCCATACTCCAGTTTAGACAGCTATCAAATCCATGGGTTAAGTAGGCATAATGTAGAAAAAGAGGAAGGTATAGACGCCACTTTCAACAACGTGCATTTGAATTTCTCATCTGTACCCAAATGTCTTAGTCAGTGCGATAACTATGTCGAAGACCGTGGCTTCTTCTGTGCACAAAGTGCTAATTGGCTTATGAATTATGCATCGAATGACGAACACCGGCATCCTTCTTTAGAAAGTATGTGTGCTTCTGGCTTTGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAGCACTGCCAAACAGCTTACCATCTACTTGAGTACCCACTGGATGAAATGAGACCAACATCCCCTGTCAATGAAGAATGTAATATTGACAGTTCAGAATATCGACAGCCCTTCTTCATCCAACCCGAGTCATTCTTTCAAGAAGGGAAGAAGGTACGCTCTCTACTGACTGATAAACTTAGCTGGGATGTCACTAGAAGTGAAATAAATGTCGCTATAACTGAAATGGATTACGTTTGA

Coding sequence (CDS)

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTCCTCATCGCACTCTTTCCTCTTCCTTCAAACCTCCTGTTTTATCCCTCCCTTTTTACAACGCCTGCGCTTCCAAATCCATTTCAATCTCCAAACACAATGCCCTCAAAAATGGATCCGCGAGGATCAGACCTATGTCGATTAGAGCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACGGGACAACATACGGTACCAAATGTTTTCATAGGGGGCAAGCACATAGGCGGTTGTACAGATAGTATCTGTCGGAAGAGAATAAAAGTTGGAGACCTTGATTGTGATAGACCTTTGACATGCAGAAGAGATACTTCTCCCGTATCCTTGAAAGAAGGACATGTTACATGCCCGATGGCAGCAAATAATGCAAAAACTTCGGAGTTTGCATTTTTTAAGAAGTTCAAGGATGCAAACCGTAGATTCAGTTCATCTCTTCAACGTCAAAAGGAACTTCAATCCAAGGAGTTCAACTCGACTGATCATTTCAGAGAGAGAGCAAGGCATGTTGAAAATCGCCGTGAAGACTTCGCATCACATCCTTTTGTTGAGAATGTCACTCCTATTAACTTTAACTCGATGCATTTACCCCTGGGTAATTCATCCAAAATTTCAGAGGTAGATGTGAAGCACGCTCATAAAACATTTAAGGATATACAGAGCAAACAGAGAAACGTGGAAAATGATGATATTTTTAGTAGGAAGAGGCAGAAATTACGTCAGTTCATTCAGAATATGTCGTTCCATGGAACTGGTGAATCATATGAGAAGAGGTATGGTGTTATTTCCACTCTACTTAGTCGGCTTATACCTGAAAGCAATCAGTATAAGAATGAACCTGATTCTCGACAGTTTAATAATAACTTGGAAAAACTACAATGGTTGCCTGGAAGGTGCTGGCCAAGGCTTGATTATGAGCATCGTTTGAATAATAGTTCATCGCCTTGTCGTTTGAATAAATCAAGAGGCAGAGTTCTTTTCCACTCTGATTTCTCAACCAATAACGATGATGACAACTTCCACGTTAAGTACAGGACCAAGGACTTTGACAGTGATGTAGAAGGGAAAATGACTTTGCTTGATGCCAATAGTTCACCTAGTACTGCTGCAGTTGAAAACTATAGATCACTTATCAACCTTTTCAACCCGCAATACGGTTTCTATGATCAAGGTGAACCTTTGCACATAAGGAAGCAAGAGATGGAACCTCTTCTGCTGGGTTGGGATACGGACGACATAAAAGATGACAGTTCTAAAGTTACAGAGTTCCACACATTTGCTGAGCCACCAATTTCGTTCGCTGATGACCATCAGCCAAACTTGCAGGAGAGTTTTGGAGCTGTTGCACTATGTTCATCCCCTTTCCCTTCCAGTTATCATAGAAACTTATATCCATTGCCATACTCCAGTTTAGACAGCTATCAAATCCATGGGTTAAGTAGGCATAATGTAGAAAAAGAGGAAGGTATAGACGCCACTTTCAACAACGTGCATTTGAATTTCTCATCTGTACCCAAATGTCTTAGTCAGTGCGATAACTATGTCGAAGACCGTGGCTTCTTCTGTGCACAAAGTGCTAATTGGCTTATGAATTATGCATCGAATGACGAACACCGGCATCCTTCTTTAGAAAGTATGTGTGCTTCTGGCTTTGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAGCACTGCCAAACAGCTTACCATCTACTTGAGTACCCACTGGATGAAATGAGACCAACATCCCCTGTCAATGAAGAATGTAATATTGACAGTTCAGAATATCGACAGCCCTTCTTCATCCAACCCGAGTCATTCTTTCAAGAAGGGAAGAAGGTACGCTCTCTACTGACTGATAAACTTAGCTGGGATGTCACTAGAAGTGAAATAAATGTCGCTATAACTGAAATGGATTACGTTTGA

Protein sequence

MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSIRASSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLDCDRPLTCRRDTSPVSLKEGHVTCPMAANNAKTSEFAFFKKFKDANRRFSSSLQRQKELQSKEFNSTDHFRERARHVENRREDFASHPFVENVTPINFNSMHLPLGNSSKISEVDVKHAHKTFKDIQSKQRNVENDDIFSRKRQKLRQFIQNMSFHGTGESYEKRYGVISTLLSRLIPESNQYKNEPDSRQFNNNLEKLQWLPGRCWPRLDYEHRLNNSSSPCRLNKSRGRVLFHSDFSTNNDDDNFHVKYRTKDFDSDVEGKMTLLDANSSPSTAAVENYRSLINLFNPQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKDDSSKVTEFHTFAEPPISFADDHQPNLQESFGAVALCSSPFPSSYHRNLYPLPYSSLDSYQIHGLSRHNVEKEEGIDATFNNVHLNFSSVPKCLSQCDNYVEDRGFFCAQSANWLMNYASNDEHRHPSLESMCASGFVFDFGWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEECNIDSSEYRQPFFIQPESFFQEGKKVRSLLTDKLSWDVTRSEINVAITEMDYV

Homology

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BLAST of CmaCh17G013580 vs. Swiss-Prot
Match: GRXC5_ARATH (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-39
Identity = 90/157 (57.32%), Postives = 113/157 (71.97%), Query Frame = 1


Query: 18  LSSSFKPPVLSLPFYNACASKSISI----SKHNALKNGSARIRPMSIRAS------SSFG 77
           L SS   P+ S+    +C+S S S+    S +      S  +R M+  +S      SSFG
Sbjct: 11  LVSSSLDPIPSV----SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFG 70

Query: 78  SRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVL 137
           SR+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKVL
Sbjct: 71  SRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVL 130

Query: 138 ERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLD 165
           ERLTGQHTVPNVF+ GKHIGGCTD++  K  + GDL+
Sbjct: 131 ERLTGQHTVPNVFVCGKHIGGCTDTV--KLNRKGDLE 161

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BLAST of CmaCh17G013580 vs. Swiss-Prot
Match: GRS10_ORYSJ (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-37
Identity = 86/141 (60.99%), Postives = 99/141 (70.21%), Query Frame = 1


Query: 14  PHRTLSSSFKP-PVLSLPFYNACASKSISISKHNALKNGSARIRPMSIRASSSFGSRLEE 73
           P R+L+ S  P   L LPF +             A +  S   R  S    SSFGSR+E+
Sbjct: 2   PPRSLTLSRLPVAALGLPFSSCSPPPPRLRFPFAARRARSLATRASSSSPDSSFGSRMED 61

Query: 74  SVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTG 133
           SVK T+  NPVV+YSK+WCSYS EVKALFKR+G QP VIELD+LG QGPQLQKVLERLTG
Sbjct: 62  SVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQPHVIELDQLGAQGPQLQKVLERLTG 121

Query: 134 QHTVPNVFIGGKHIGGCTDSI 154
           Q TVPNVFIGGKHIGGCTD++
Sbjct: 122 QSTVPNVFIGGKHIGGCTDTV 142

[Close]

BLAST of CmaCh17G013580 vs. Swiss-Prot
Match: GRS12_ARATH (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 2.5e-34
Identity = 75/125 (60.00%), Postives = 93/125 (74.40%), Query Frame = 1


Query: 29  LPFYNACASKSISISKHNALKNGSARIRPMSIRASSSFGSRLEESVKTTITQNPVVVYSK 88
           LPF        I I+    L+  S +    S   SSS GS LEE+VKTT+ +NPVVVYSK
Sbjct: 36  LPFRRCLKPTVIGIASWPPLRCSSVKAMSSS---SSSSGSTLEETVKTTVAENPVVVYSK 95

Query: 89  TWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGG 148
           TWCSYSS+VK+LFK L  +PLV+ELD+LG +G QLQ VLE++TGQ+TVPNVFIGGKHIGG
Sbjct: 96  TWCSYSSQVKSLFKSLQVEPLVVELDQLGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGG 155

Query: 149 CTDSI 154
           C+D++
Sbjct: 156 CSDTL 157

[Close]

BLAST of CmaCh17G013580 vs. Swiss-Prot
Match: GRXC6_ORYSJ (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-15
Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 1


Query: 75  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 134
           K T+   PVVVYSK++C +   VK LF++LGA    IELD     G +LQ  L   TGQ 
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGES-DGSELQSALAEWTGQR 66

Query: 135 TVPNVFIGGKHIGGCTDSI 154
           TVPNVFI GKHIGGC D++
Sbjct: 67  TVPNVFINGKHIGGCDDTL 84

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BLAST of CmaCh17G013580 vs. Swiss-Prot
Match: GLRX_VERFO (Glutaredoxin OS=Vernicia fordii PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.4e-15
Identity = 43/72 (59.72%), Postives = 49/72 (68.06%), Query Frame = 1


Query: 78  ITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVP 137
           ++ N VVV+SKT+C Y + VK L  +LGAQ  VIELD     G  LQ  L   TGQ TVP
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSES-DGSDLQNALAEWTGQRTVP 69

Query: 138 NVFIGGKHIGGC 150
           NVFIGGKHIGGC
Sbjct: 70  NVFIGGKHIGGC 80

[Close]

BLAST of CmaCh17G013580 vs. TrEMBL
Match: A0A0A0K889_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G329370 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.9e-91
Identity = 189/297 (63.64%), Postives = 223/297 (75.08%), Query Frame = 1


Query: 427 MTLLDANSSPSTAAVENYRSLIN-LFNPQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKD 486
           MTLL+      TAAVENYRS I+ LF PQYG YDQ E  H+RKQ+++PLLLGWDTD IKD
Sbjct: 1   MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLKPLLLGWDTDYIKD 60

Query: 487 DSS-KVTEFHTFAEPPISFADDHQPNLQESFGAVALCSSPFPSSYHRNLYPLPYSSLDSY 546
           +SS ++TE +T A+ PISFADD QP + ESFGA  LCSSPFPSS   NL  LPYSSL S 
Sbjct: 61  ESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSPFPSSNRTNLNSLPYSSLASS 120

Query: 547 QIHGLSRHNVEKEEGIDATFNNVHLNFSSVPKCLSQCDNYVEDRGF--FCAQSANWLMNY 606
           QIHGLS  NV  E+ I  TFNN+HLNFSSVPK L Q ++ V+D G    CAQ+ +W+MN 
Sbjct: 121 QIHGLSWQNVAGED-IGTTFNNLHLNFSSVPKFLHQWNSSVDDGGCHDLCAQNTDWVMNN 180

Query: 607 ASNDEHRHPSLESMCASGFVFDFGWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEECN 666
             +D  +HPS+ES+CASG VFDFG KYLS SKE  QTAYH+L+YPLDE++PT+  NEE +
Sbjct: 181 VLDDGSQHPSIESLCASGLVFDFGCKYLSDSKEQRQTAYHILKYPLDEIQPTALTNEEWS 240

Query: 667 IDSS-----EYRQPFFIQPESFFQEGKKVRSLLTDKLSWDVTRSEINV-AITEMDYV 714
            DSS     +YR PFFIQPESFFQ   KV S+LTDKLSWDV RSEINV  ITEM+Y+
Sbjct: 241 NDSSDDVLVDYRPPFFIQPESFFQ--GKVYSILTDKLSWDVARSEINVDDITEMNYI 288

[Close]

BLAST of CmaCh17G013580 vs. TrEMBL
Match: A0A0A0KA52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087860 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.6e-59
Identity = 130/174 (74.71%), Postives = 138/174 (79.31%), Query Frame = 1


Query: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSI 60
           MAVPSNFTS P    R LS  FK  V  LPFYN+C SKSISISKHNA   G  R RPMSI
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAF-TGFTRTRPMSI 70

Query: 61  RA----------SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++          SSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLD 165
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTD++  K  + G+L+
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTV--KLYRKGELE 181

[Close]

BLAST of CmaCh17G013580 vs. TrEMBL
Match: M5W045_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012249mg PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.3e-46
Identity = 107/162 (66.05%), Postives = 126/162 (77.78%), Query Frame = 1


Query: 5   SNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASK-SISISKHNALKNGSARIRPMSIRA- 64
           +NFTS  L   R LSS+ K  + S P  N C+ + S SIS  +   NGS R R  S++A 
Sbjct: 8   TNFTSVSLNSARILSSTNKSSICSAPLSNNCSPRGSSSISLFSI--NGSRRWRSFSVKAM 67

Query: 65  SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQ 124
           +SSFGSRLEESVK T+ +NPVVVYSKTWCSYSSEVK+LFKRLG +P+VIELDELGPQGPQ
Sbjct: 68  ASSFGSRLEESVKKTVDENPVVVYSKTWCSYSSEVKSLFKRLGVEPMVIELDELGPQGPQ 127

Query: 125 LQKVLERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLD 165
           LQKVLERLTGQHTVPNVFI GKHIGGCTD++  K  + G+L+
Sbjct: 128 LQKVLERLTGQHTVPNVFIAGKHIGGCTDTV--KLYRKGELE 165

[Close]

BLAST of CmaCh17G013580 vs. TrEMBL
Match: W9QZP8_9ROSA (Glutaredoxin-C5 OS=Morus notabilis GN=L484_015915 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 99/155 (63.87%), Postives = 124/155 (80.00%), Query Frame = 1


Query: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALK-NGSARIRPMS 60
           M V SNFTS  L+  R LSS  K  V ++P  N  + ++IS S  +    +GS R RP+S
Sbjct: 1   MVVSSNFTSISLSSPRILSSVVKSSVCAIPLNNGFSPRNISSSATSFFGVHGSRRCRPIS 60

Query: 61  IRA-SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGP 120
           ++A SSSFGSRLEE+VK T+T+NPVVVYSKTWCSYSSEVK+LFK+LG +PLVIELDE+G 
Sbjct: 61  VQAMSSSFGSRLEETVKKTVTENPVVVYSKTWCSYSSEVKSLFKKLGVEPLVIELDEMGA 120

Query: 121 QGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDSI 154
           QGPQ+QK+LERLTGQHTVPNVF+GG HIGGC++++
Sbjct: 121 QGPQVQKLLERLTGQHTVPNVFVGGNHIGGCSETV 155

[Close]

BLAST of CmaCh17G013580 vs. TrEMBL
Match: B7U333_9ROSI (Glutaredoxin S12 OS=Populus tremula x Populus tremuloides PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-43
Identity = 101/161 (62.73%), Postives = 118/161 (73.29%), Query Frame = 1


Query: 12  LTPHRTLSSSFKPPVLSLPFYNACAS--KSISISKHNALKNGSARIRPMSIRA------S 71
           L   RTLSS    P+ S P  N  +S  K+ S S      NG  R RPM++RA      S
Sbjct: 14  LKSSRTLSSLRGLPICSTPLSNNSSSSLKTTSTSSRILSINGPKRYRPMAVRATDSSSPS 73

Query: 72  SSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQL 131
           SSFGSRLE++VK T+ +NPVVVYSKTWCSYSSEVK+LFKRL   PLV+ELDELG QGPQ+
Sbjct: 74  SSFGSRLEDAVKKTVAENPVVVYSKTWCSYSSEVKSLFKRLNVDPLVVELDELGAQGPQI 133

Query: 132 QKVLERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLD 165
           QKVLERLTGQHTVPNVFIGGKHIGGCTD++  K  + G+L+
Sbjct: 134 QKVLERLTGQHTVPNVFIGGKHIGGCTDTV--KLYRKGELE 172

[Close]

BLAST of CmaCh17G013580 vs. TAIR10
Match: AT4G28730.1 (AT4G28730.1 Glutaredoxin family protein)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-40
Identity = 90/157 (57.32%), Postives = 113/157 (71.97%), Query Frame = 1


Query: 18  LSSSFKPPVLSLPFYNACASKSISI----SKHNALKNGSARIRPMSIRAS------SSFG 77
           L SS   P+ S+    +C+S S S+    S +      S  +R M+  +S      SSFG
Sbjct: 11  LVSSSLDPIPSV----SCSSYSFSLIYVGSPYKRCLKQSCSVRAMTSSSSAASSSSSSFG 70

Query: 78  SRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVL 137
           SR+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKVL
Sbjct: 71  SRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVL 130

Query: 138 ERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLD 165
           ERLTGQHTVPNVF+ GKHIGGCTD++  K  + GDL+
Sbjct: 131 ERLTGQHTVPNVFVCGKHIGGCTDTV--KLNRKGDLE 161

[Close]

BLAST of CmaCh17G013580 vs. TAIR10
Match: AT2G20270.2 (AT2G20270.2 Thioredoxin superfamily protein)

HSP 1 Score: 134.0 bits (336), Expect = 3.5e-31
Identity = 75/152 (49.34%), Postives = 93/152 (61.18%), Query Frame = 1


Query: 29  LPFYNACASKSISISKHNALKNGSARIRPMSIRASSSFGSRLEESVKTTITQNPVVVYSK 88
           LPF        I I+    L+  S +    S   SSS GS LEE+VKTT+ +NPVVVYSK
Sbjct: 36  LPFRRCLKPTVIGIASWPPLRCSSVKAMSSS---SSSSGSTLEETVKTTVAENPVVVYSK 95

Query: 89  TWCSYSSEVKALFKRLGAQPLVIELDEL---------------------------GPQGP 148
           TWCSYSS+VK+LFK L  +PLV+ELD+L                           G +G 
Sbjct: 96  TWCSYSSQVKSLFKSLQVEPLVVELDQLVSLGKTSLPHDIGLKHLQKFWWFLAFPGSEGS 155

Query: 149 QLQKVLERLTGQHTVPNVFIGGKHIGGCTDSI 154
           QLQ VLE++TGQ+TVPNVFIGGKHIGGC+D++
Sbjct: 156 QLQNVLEKITGQYTVPNVFIGGKHIGGCSDTL 184

[Close]

BLAST of CmaCh17G013580 vs. TAIR10
Match: AT5G63030.1 (AT5G63030.1 Thioredoxin superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 6.1e-15
Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 1


Query: 75  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 134
           K  ++  PVVV+SKT+C Y   VK L  +LGA   V+ELDE+   G ++Q  L   TGQ 
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMS-DGGEIQSALSEWTGQT 82

Query: 135 TVPNVFIGGKHIGGC 150
           TVPNVFI G HIGGC
Sbjct: 83  TVPNVFIKGNHIGGC 96

[Close]

BLAST of CmaCh17G013580 vs. TAIR10
Match: AT5G20500.1 (AT5G20500.1 Glutaredoxin family protein)

HSP 1 Score: 77.0 bits (188), Expect = 5.1e-14
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 1


Query: 63  SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQ 122
           SS+  S   + VK TI+ + +V++SK++C Y  + K++F+ L   P V+ELDE    G  
Sbjct: 24  SSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDE-REDGWS 83

Query: 123 LQKVLERLTGQHTVPNVFIGGKHIGGCTDSI 154
           +Q  L  + G+ TVP VFI GKH+GG  D++
Sbjct: 84  IQTALGEIVGRRTVPQVFINGKHLGGSDDTV 113

[Close]

BLAST of CmaCh17G013580 vs. TAIR10
Match: AT1G77370.1 (AT1G77370.1 Glutaredoxin family protein)

HSP 1 Score: 70.5 bits (171), Expect = 4.8e-12
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 1


Query: 63  SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQ 122
           S+   + +   V+  I  N +V++SK++C Y    K +F +L  +P V+ELD+    G Q
Sbjct: 26  SAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQR-EDGDQ 85

Query: 123 LQKVLERLTGQHTVPNVFIGGKHIGGCTD 152
           +Q  L    G+ TVP VF+ GKHIGG  D
Sbjct: 86  IQYELLEFVGRRTVPQVFVNGKHIGGSDD 113

[Close]

BLAST of CmaCh17G013580 vs. NCBI nr
Match: gi|659124094|ref|XP_008461985.1| (PREDICTED: uncharacterized protein LOC103500465 [Cucumis melo])

HSP 1 Score: 808.1 bits (2086), Expect = 1.2e-230
Identity = 425/574 (74.04%), Postives = 474/574 (82.58%), Query Frame = 1


Query: 151 DSICRKRIKVGDLDCDRPLTCRRDTSPVSLKEGHVTCPMAANNAKTSEFAFFKKFK-DAN 210
           DS  RKR KVGDLD DRPLTCRRD+SP+SLKE HVT    A NAKTSEFAFFKKFK DA+
Sbjct: 12  DSSRRKRTKVGDLDRDRPLTCRRDSSPISLKERHVTY---AKNAKTSEFAFFKKFKEDAS 71

Query: 211 RRFSSSLQRQKELQSKEFNSTDHFRERARHVENRREDFASHPFVENVTPINFNSMHLPLG 270
            RFSSSL RQKELQSK+FNS+D FRE A  VENR +DF SH  VE VTP+NFNS+HLPLG
Sbjct: 72  HRFSSSLPRQKELQSKKFNSSDCFRESASPVENRCKDFTSHHLVEKVTPVNFNSLHLPLG 131

Query: 271 NSSKISEVDVKHAHKTFKDIQSKQRNVENDDIFSRKRQKLRQFIQNMSFHGTGESYEKRY 330
           N SKIS+VDVKHAHKTF+DIQSKQRNVENDDIFSRKRQKLRQFIQNMSF GTGESYEK Y
Sbjct: 132 NPSKISDVDVKHAHKTFEDIQSKQRNVENDDIFSRKRQKLRQFIQNMSFRGTGESYEKGY 191

Query: 331 GVISTLLSRLIPESNQYKNEPDSRQFNNNLEKLQWLPGRCWPRLDYEHRLNNSSSPCRLN 390
           GVIS LLSRLIPE N YK       FNNNLEK+Q L GRC+PRLDYEH LNNS SPCRLN
Sbjct: 192 GVISRLLSRLIPERNHYK-------FNNNLEKIQKLRGRCYPRLDYEHHLNNSLSPCRLN 251

Query: 391 KSRGRVLFHSDFSTNNDDDNFHVKYRTKDFDSDVEGKMTLLDANSSPSTAAVENYRSLI- 450
            SRGR  FHSDFSTN++D+NF VKYRTK+FD DV+ KMTLLD N SP TAAVENYRS I 
Sbjct: 252 NSRGRSSFHSDFSTNSNDNNFQVKYRTKEFDCDVDRKMTLLDVNGSPLTAAVENYRSFIS 311

Query: 451 NLFNPQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKDD-SSKVTEFHTFAEPPISFADDH 510
           +LFNPQY  YDQ E LH+RKQ++EPLLLGWDTD IKD+ SS++TE +TFA+ PISFADDH
Sbjct: 312 SLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTFAKSPISFADDH 371

Query: 511 QPNLQESFGAVALCSSPFPSSYHRNLYPLPYSSLDSYQIHGLSRHNVEKEEGIDATFNNV 570
           QP L ESFGAVALCSSPFPSS   N   LPYS+L SYQI GLS  NV KEE IDATFNN+
Sbjct: 372 QPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASYQIQGLSWQNVSKEEDIDATFNNL 431

Query: 571 HLNFSSVPKCLSQCDNYVEDRGF--FCAQSANWLMNYASNDEHRHPSLESMCASGFVFDF 630
           HLNFSSVPKCL QC++YV+D G    CAQ+A+W+MN   NDE +HPS+ES+CASG VFDF
Sbjct: 432 HLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNNVVNDESQHPSVESLCASGLVFDF 491

Query: 631 GWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEECNIDSS-----EYRQPFFIQPESFF 690
           GWKYLSGSKE CQT+YH+L+YPLDE++PT+ +NEE + DSS     +Y  PF+IQPESFF
Sbjct: 492 GWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWSNDSSDDVLVDYGPPFYIQPESFF 551

Query: 691 QEGKKVRSLLTDKLS-WDVTRSEINV-AITEMDY 713
           QEG KV S+LTDKLS WDV RSEINV  ITEM+Y
Sbjct: 552 QEG-KVYSVLTDKLSCWDVVRSEINVDDITEMNY 574

[Close]

BLAST of CmaCh17G013580 vs. NCBI nr
Match: gi|778726776|ref|XP_011659159.1| (PREDICTED: uncharacterized protein LOC101207408 [Cucumis sativus])

HSP 1 Score: 729.2 bits (1881), Expect = 7.1e-207
Identity = 398/574 (69.34%), Postives = 451/574 (78.57%), Query Frame = 1


Query: 151 DSICRKRIKVGDLDCDRPLTCRRDTSPVSLKEGHVTCPMAANNAKTSEFAFFKKFK-DAN 210
           DS  +KR KVGDLD DRPLTCRRD+SP+S KE  V+      NAKTSEFAFFKKFK DA+
Sbjct: 12  DSSRQKRTKVGDLDRDRPLTCRRDSSPISTKERRVSY---GKNAKTSEFAFFKKFKEDAS 71

Query: 211 RRFSSSLQRQKELQSKEFNSTDHFRERARHVENRREDFASHPFVENVTPINFNSMHLPLG 270
            RFSSSL RQKELQSK+FNS D FRERA  VEN  +D+ SH  VE VTP+NFNS+HLPLG
Sbjct: 72  HRFSSSLPRQKELQSKKFNSNDCFRERASPVENGCKDYTSHHLVEKVTPVNFNSLHLPLG 131

Query: 271 NSSKISEVDVKHAHKTFKDIQSKQRNVENDDIFSRKRQKLRQFIQNMSFHGTGESYEKRY 330
           NSSKIS+VDV HAHKTFKDIQSKQRNVENDDIFSRKRQKLRQFIQNMSFHGTGESYEK Y
Sbjct: 132 NSSKISDVDVLHAHKTFKDIQSKQRNVENDDIFSRKRQKLRQFIQNMSFHGTGESYEKGY 191

Query: 331 GVISTLLSRLIPESNQYKNEPDSRQFNNNLEKLQWLPGRCWPRLDYEHRLNNSSSPCRLN 390
           GVIS LLSRLIPE NQYK       FNNNLEK+Q L GRC P LDYEH LNNS SPCRLN
Sbjct: 192 GVISRLLSRLIPERNQYK-------FNNNLEKIQRLRGRCCPWLDYEHHLNNSLSPCRLN 251

Query: 391 KSRGRVLFHSDFSTNNDDDNFHVKYRTKDFDSDVEGKMTLLDANSSPSTAAVENYRSLI- 450
           KSRGR   HSDFSTN++D+NF +KYRTK+FD +V+ KMTLL+      TAAVENYRS I 
Sbjct: 252 KSRGRSFSHSDFSTNSEDNNFQIKYRTKEFDCNVDRKMTLLNV-----TAAVENYRSFIS 311

Query: 451 NLFNPQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKDD-SSKVTEFHTFAEPPISFADDH 510
           +LF PQYG YDQ E  H+RKQ+++PLLLGWDTD IKD+ SS++TE +T A+ PISFADD 
Sbjct: 312 SLFKPQYGLYDQDEHFHLRKQKLKPLLLGWDTDYIKDESSSQLTELNTIAKSPISFADD- 371

Query: 511 QPNLQESFGAVALCSSPFPSSYHRNLYPLPYSSLDSYQIHGLSRHNVEKEEGIDATFNNV 570
           QP + ESFGA  LCSSPFPSS   NL  LPYSSL S QIHGLS  NV  E+ I  TFNN+
Sbjct: 372 QPTMHESFGAAPLCSSPFPSSNRTNLNSLPYSSLASSQIHGLSWQNVAGED-IGTTFNNL 431

Query: 571 HLNFSSVPKCLSQCDNYVEDRGF--FCAQSANWLMNYASNDEHRHPSLESMCASGFVFDF 630
           HLNFSSVPK L Q ++ V+D G    CAQ+ +W+MN   +D  +HPS+ES+CASG VFDF
Sbjct: 432 HLNFSSVPKFLHQWNSSVDDGGCHDLCAQNTDWVMNNVLDDGSQHPSIESLCASGLVFDF 491

Query: 631 GWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEECNIDSS-----EYRQPFFIQPESFF 690
           G KYLS SKE  QTAYH+L+YPLDE++PT+  NEE + DSS     +YR PFFIQPESFF
Sbjct: 492 GCKYLSDSKEQRQTAYHILKYPLDEIQPTALTNEEWSNDSSDDVLVDYRPPFFIQPESFF 551

Query: 691 QEGKKVRSLLTDKLSWDVTRSEINV-AITEMDYV 714
           Q   KV S+LTDKLSWDV RSEINV  ITEM+Y+
Sbjct: 552 Q--GKVYSILTDKLSWDVARSEINVDDITEMNYI 566

[Close]

BLAST of CmaCh17G013580 vs. NCBI nr
Match: gi|700189319|gb|KGN44552.1| (hypothetical protein Csa_7G329370 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 1.4e-90
Identity = 189/297 (63.64%), Postives = 223/297 (75.08%), Query Frame = 1


Query: 427 MTLLDANSSPSTAAVENYRSLIN-LFNPQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKD 486
           MTLL+      TAAVENYRS I+ LF PQYG YDQ E  H+RKQ+++PLLLGWDTD IKD
Sbjct: 1   MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLKPLLLGWDTDYIKD 60

Query: 487 DSS-KVTEFHTFAEPPISFADDHQPNLQESFGAVALCSSPFPSSYHRNLYPLPYSSLDSY 546
           +SS ++TE +T A+ PISFADD QP + ESFGA  LCSSPFPSS   NL  LPYSSL S 
Sbjct: 61  ESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSPFPSSNRTNLNSLPYSSLASS 120

Query: 547 QIHGLSRHNVEKEEGIDATFNNVHLNFSSVPKCLSQCDNYVEDRGF--FCAQSANWLMNY 606
           QIHGLS  NV  E+ I  TFNN+HLNFSSVPK L Q ++ V+D G    CAQ+ +W+MN 
Sbjct: 121 QIHGLSWQNVAGED-IGTTFNNLHLNFSSVPKFLHQWNSSVDDGGCHDLCAQNTDWVMNN 180

Query: 607 ASNDEHRHPSLESMCASGFVFDFGWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEECN 666
             +D  +HPS+ES+CASG VFDFG KYLS SKE  QTAYH+L+YPLDE++PT+  NEE +
Sbjct: 181 VLDDGSQHPSIESLCASGLVFDFGCKYLSDSKEQRQTAYHILKYPLDEIQPTALTNEEWS 240

Query: 667 IDSS-----EYRQPFFIQPESFFQEGKKVRSLLTDKLSWDVTRSEINV-AITEMDYV 714
            DSS     +YR PFFIQPESFFQ   KV S+LTDKLSWDV RSEINV  ITEM+Y+
Sbjct: 241 NDSSDDVLVDYRPPFFIQPESFFQ--GKVYSILTDKLSWDVARSEINVDDITEMNYI 288

[Close]

BLAST of CmaCh17G013580 vs. NCBI nr
Match: gi|659120054|ref|XP_008459988.1| (PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 1.5e-60
Identity = 132/174 (75.86%), Postives = 141/174 (81.03%), Query Frame = 1


Query: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSI 60
           MAVPSNFTS P    R LS  FK  V SLPFYN+C SKSISISKHN+L NG  R R MSI
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSL-NGFTRTRSMSI 70

Query: 61  RA----------SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++          SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLD 165
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTD++  K  + G+L+
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTV--KLYRKGELE 181

[Close]

BLAST of CmaCh17G013580 vs. NCBI nr
Match: gi|778711543|ref|XP_004140671.2| (PREDICTED: glutaredoxin-C5, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 3.8e-59
Identity = 130/174 (74.71%), Postives = 138/174 (79.31%), Query Frame = 1


Query: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSI 60
           MAVPSNFTS P    R LS  FK  V  LPFYN+C SKSISISKHNA   G  R RPMSI
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAF-TGFTRTRPMSI 70

Query: 61  RA----------SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++          SSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDSICRKRIKVGDLD 165
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTD++  K  + G+L+
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTV--KLYRKGELE 181

The following BLAST results are available for this feature:

BLAST of CmaCh17G013580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXC5_ARATH	2.0e-39	57.32	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana GN=GRXC5 PE=1 SV=1	[more]
GRS10_ORYSJ	1.4e-37	60.99	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2	[more]
GRS12_ARATH	2.5e-34	60.00	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana GN=GRXS12 PE=1...	[more]
GRXC6_ORYSJ	3.4e-15	54.43	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2	[more]
GLRX_VERFO	4.4e-15	59.72	Glutaredoxin OS=Vernicia fordii PE=3 SV=1	[more]

BLAST of CmaCh17G013580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K889_CUCSA	9.9e-91	63.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G329370 PE=4 SV=1	[more]
A0A0A0KA52_CUCSA	2.6e-59	74.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087860 PE=4 SV=1	[more]
M5W045_PRUPE	3.3e-46	66.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012249mg PE=4 SV=1	[more]
W9QZP8_9ROSA	4.8e-45	63.87	Glutaredoxin-C5 OS=Morus notabilis GN=L484_015915 PE=4 SV=1	[more]
B7U333_9ROSI	2.7e-43	62.73	Glutaredoxin S12 OS=Populus tremula x Populus tremuloides PE=2 SV=1	[more]

BLAST of CmaCh17G013580 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28730.1	1.1e-40	57.32	Glutaredoxin family protein	[more]
AT2G20270.2	3.5e-31	49.34	Thioredoxin superfamily protein	[more]
AT5G63030.1	6.1e-15	53.33	Thioredoxin superfamily protein	[more]
AT5G20500.1	5.1e-14	40.66	Glutaredoxin family protein	[more]
AT1G77370.1	4.8e-12	38.20	Glutaredoxin family protein	[more]

BLAST of CmaCh17G013580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124094\|ref\|XP_008461985.1\|	1.2e-230	74.04	PREDICTED: uncharacterized protein LOC103500465 [Cucumis melo]	[more]
gi\|778726776\|ref\|XP_011659159.1\|	7.1e-207	69.34	PREDICTED: uncharacterized protein LOC101207408 [Cucumis sativus]	[more]
gi\|700189319\|gb\|KGN44552.1\|	1.4e-90	63.64	hypothetical protein Csa_7G329370 [Cucumis sativus]	[more]
gi\|659120054\|ref\|XP_008459988.1\|	1.5e-60	75.86	PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo]	[more]
gi\|778711543\|ref\|XP_004140671.2\|	3.8e-59	74.71	PREDICTED: glutaredoxin-C5, chloroplastic-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR012336	Thioredoxin-like_fold
IPR014025	Glutaredoxin_subgr

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G013580.1	CmaCh17G013580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 83..146 score: 1.4
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 71..171 score: 18
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 68..151 score: 1.4
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 71..151 score: 5.48
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 129..142 score: 4.0E-11coord: 143..156 score: 4.0E-11coord: 83..101 score: 4.0
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..153 score: 1.1
None	No IPR available	PANTHER	PTHR10168:SF14	GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED	coord: 1..153 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G013580	Cucsa.348740	Cucumber (Gy14) v1	cgycmaB0951
CmaCh17G013580	Csa6G087860	Cucumber (Chinese Long) v2	cmacuB367
CmaCh17G013580	MELO3C022405	Melon (DHL92) v3.5.1	cmameB315
CmaCh17G013580	ClCG06G001290	Watermelon (Charleston Gray)	cmawcgB322
CmaCh17G013580	CSPI06G06870	Wild cucumber (PI 183967)	cmacpiB371
CmaCh17G013580	CmoCh17G013180	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G013580	Lsi09G018100	Bottle gourd (USVL1VR-Ls)	cmalsiB333
CmaCh17G013580	Cp4.1LG12g10310	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G013580	MELO3C022405.2	Melon (DHL92) v3.6.1	cmamedB367
CmaCh17G013580	CsaV3_6G007220	Cucumber (Chinese Long) v3	cmacucB0439
CmaCh17G013580	Cla97C06G110560	Watermelon (97103) v2	cmawmbB369
CmaCh17G013580	CsGy6G006880	Cucumber (Gy14) v2	cgybcmaB751
CmaCh17G013580	Carg11528	Silver-seed gourd	carcmaB0020

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G013580	Cucurbita maxima (Rimu)	cmacmaB384
CmaCh17G013580	Cucurbita moschata (Rifu)	cmacmoB376
CmaCh17G013580	Cucurbita pepo (Zucchini)	cmacpeB389
CmaCh17G013580	Silver-seed gourd	carcmaB0111