Cla97C06G110560 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G110560
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Glutaredoxin-C5
Location	Cla97Chr06 : 1195824 .. 1199945 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCCTTCCAGTTTGACCTCTCCTCGTCTAAATTCTCCTCGCTCTCTTTCCTTCTTCTTCAAAGCTTCCGTTTATTCCCTTCCTTTTTACAAGTCCTGCACTTCCAAATCCATTTCCATCTCAAAACACAATCCCCTCAATGGCTTCTTAAGGACCAGACCCATGTCGATTAAATCCGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACCCAGAACCCAGTTGTTGTCTACTCCAAGACATGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTTTTTTCTTTCTTTTCCGATTTCATTTATGCCCCTTTTCCTGATTTGGGTTTTCTTTAGCTTGTTGGAAACATTTTGAAATCAGATCGTTATTTTTTTGAAGGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGACTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTACTTTTTCTTTCCCTTCTTCTTACACTTTCCTGCAATCTGAGGACTGAAATCACTTTTTTTCCTCTATGATGATAACTTCCATTCCTGTCATATGTCCTAACTAAACTATTAACTTAAATTTTCGGATTAAGTGGTAAGTTAATATGATATCAGACTAGGAGATTCTCTATTTGAGTTGAATTCGATCCCTGCAATGTTGTTTTCCCAAATTAATGATGTTTATAGTTCGTGTGTTGGTTTTTATGAATCAAAACGATATCAGACCCCATATTGACTTATCGGTATAAAAGTTTGGTGGATTAATATGGTGCTATATGCTTCGTTTTAAACCAGCATGAGTTTTTCATACCATTTAATGTCTTTTCTTGAATCCGTTTACACAAGCTGTCAAGTTTTTTCCCTTCAGGTCCCCAAGGGCCACAGTTGCAAAAGGTACTTGAGAGGCTCACTGGACAACATACTGTACCAAATGTTTTCATCGGTTAGTATTGTATTTGGAACTTTTAGCTCCCGTTATGTTTTTATGAAAGTTATGCTTCTTTTCTCACAATTTCTTGATCATGTTTTCATCTTATTTAAGTAAACATTTGAATTGCTAGCCAAATTATAAAAACAAAAACGGGTTTTTGAAAACTGCTATTTGGTTTTCAAAACTTGGCTTGAATTTTGAAAACACTTCTAAGATATAGGCAACAAAATAAAGAGACTAATCAGTGGTAGTAGTGTTTGTGGCTTAATTTGCAAAGATTCTCCTTCAAAATACTATCGAAATGATCATTTGATGATATGTGTAAAAATATTGTCTTTAATATATTTTTTTTGTTTAATCTCCATGAAGTACCTATAACCTTTAGTTATGATCCCAATCAAACCCTTTGTTCAATATATATTCATCTAGAAATAATAATGGTCGTCTATAAGCTGAGAACAAAAGCATATAGAGGGGTTTATGATTCTAGGTCTCAATAAAGAGTTGGGAACAATGTGTTAAGACTCTTGATCCCGGGAAACTTGACTTGGCCCAATGTGCCTTGCACAAGCCAAGATCATATCATGTATGGGCTGGCACACGCACACTCAAAAAGATTGGCTCAGGGAAGATGCTGCTTGTAAAGAAACAAAGACATTTAGTTCGAATAATGTGTCTGTGTTGGACACATGTTAGACACTTTAACACTTGATGGACACATGATGGATACTTTTTAGCACTGTAGGCATGCGTCATACCCTAATTGTATAATTTAAGTATGAGTATTAACACTTTTTAGGACATTCTAATATTTGTTCAACATAACAAATACACATAAATAAAAATATATGACCCAAAAAAAAAAAAAATTGAAAGTGAAATATATCAAATTCACTTTTAAGCAAGACATTTAAGTGCATGAGTTTATAACTCTGAATTTCCTTTTCTATACTAATAATATGTATTTTAAACATATAAGTTGTAATAAACATTGCATTGTAAAGAAAGTGTGTTATCATGTCCATGTTGTGTTATGTCCATATCCACGATTCATAGTTTTTCTATATATAGTTTGTTTTCTTGGGCAGGAAGCAAGTGATTTTAAATGTGAAGTTTGAAAATGGGATTGTGTAAGACGTCTTGAATGTCTACCTAGACTGTAATCTTCTATACCTTAAAATTGTAGTGGTTGATTTTGTTTAAGTCCTTTACTCATATTCTCTTGCGTGTGTCTCAGCCTCACATCATCCCCTCTATAATTTTGTGAAGAGCCTCGATGAACTAACTATCCACTGCTCTAGCTTACTCCAATTAGTAGTAGAAACCACTCACTACTATGTACTTAAATTCTTCCTTCTCTTCCATGTGTTTCTTGTTTTTGGAGATCGTGGAAGGTTTTCCACCCTCCACTGAATGAGCTGAAAAAAAAAATCCTCAGAATTTCTTTGTAAACACCGGGCCTGAAAACACTCTTCTATTTCCTTTCAACCAAATTTTTACAAACTGTAAAGAAATTTACTTGCCATTGAAAGTTGCCACTCCTTTAAAAATGCGAGTTGGGGACATGGCAATAAAGAGTTGGGGATAAAAGTATCCAAAAACTGCACAGGACCTCAGTAGAAAAAATACATACACATTGCAAATGGTCCAAATCTTTTGTTGTCTTCTCACGAAGAAAGTTCTTTTGATGTTTGCACACAGCTCTTGAAAAGAATTCTATGCCGTTAAGCCTTTCAAGAGCAACTAGCCACATGAAATACCCATATATCGGAATTCTTATCCTCCAAAGCTTAGGAAAGGAAATAATGGAAAAAGGTAGGGGTGGAAATTCAATTCTTTCACACCTCCTTCAATCTCCAAAAACCCTTCATAAACCCTCAGTTTGGTCCCCTCGTCGTCCCCACAATTGTAACCGAAAACTCCATGTATGCCTACTTCTCCCTCTCGGCTGTTTTCTCCTTTTTACCCCCTCGTTCATATGTGTGAATGATTGGATGCCTTATAGATTATAAGCTCCCATGATTGAAAGTTAACTAAATAAACTTATTTTAATCAATTAACTTTCATTAATTAACTCTAGGTCATTTATCTATAGACTTAAAGTTGTAAGAATAAACGGTAGGACAAGCTATGTTCATGGGAATAACTATTACATGCAAAGTCAATCCTTTACGAGTTGTTTGTAATTACAATTGGTCAAAAAGTCAGTTTTACCTTTGTAATTGTATCTTCTACCTTAAGTAGCACTGATTCTCAAAGGAATAATCTGTATATTGATCTAACAAAAAACGAAGTTCCTCTTGGGCAGTAGATGGTGGGGTTTCATTTTCCAAGTCATGAAATCAATACTTCAAAGAACAACTCATCTACTTTCTCAATCCAAGGAGTGAATTCCATCAATCTCCAACCACTCTTTTTTGTTCCCTAATTTTACAACTAACAAGGAGATCACAAAAAATGAAGGCTTTTTCGTAGCTGATGAAGTTAAAAGAAATAAAGAAGGAGAATATTAGTTACAAAACTAATATTTACTCAAAATGCCTAGAAGAAGATACGTGGAACAAACTCTCACGCTGAAATGTTAACATAGGAATCCTCAAAACTCACGTTCAGCCCATAGGAATGCTACAAAAAAAAAAAAAGAAGCGTCTATCTCATGTTCTTTCCCCTCAATTGTGTCTTCTCTTCATTCTTATGACTGTAGTGCCTGAGTGTATATCAGACTTAATCCTGCTAGGCCACCCAAAATAGCGTGTGGCATCAAAACATGATGCTATTATATATTTACCAACTGCTAATTTGGTTTTTGAATATACTGCCCCTTGGTATTTTTTCAAATAACTACTACCATTTTATTCATGGATGTTTTCTGATTATTGTTTAAACTCACATTTCTCTCTGTGGCCAGGGGGCAAACACATAGGTGGTTGTACAGGTACATTTTTATGGCATAATTTTTTTCTTTTTTTCTTTTTAATCAAAGTTTTGAATCATTCAAAGGAAATGTACATCGCTTCACTTATATCGATCATCGGTTTTGTGCTGCAGATACTGTGAAACTATACCGAAAAGGAGAACTCGAACCTTTGCTATCTGAAGCTAATGCTAAAAATTCAGAGACCTAA

mRNA sequence

ATGGCGGTTCCTTCCAGTTTGACCTCTCCTCGTCTAAATTCTCCTCGCTCTCTTTCCTTCTTCTTCAAAGCTTCCGTTTATTCCCTTCCTTTTTACAAGTCCTGCACTTCCAAATCCATTTCCATCTCAAAACACAATCCCCTCAATGGCTTCTTAAGGACCAGACCCATGTCGATTAAATCCGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACCCAGAACCCAGTTGTTGTCTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGACTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGGGGCAAACACATAGGTGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAACTCGAACCTTTGCTATCTGAAGCTAATGCTAAAAATTCAGAGACCTAA

Coding sequence (CDS)

ATGGCGGTTCCTTCCAGTTTGACCTCTCCTCGTCTAAATTCTCCTCGCTCTCTTTCCTTCTTCTTCAAAGCTTCCGTTTATTCCCTTCCTTTTTACAAGTCCTGCACTTCCAAATCCATTTCCATCTCAAAACACAATCCCCTCAATGGCTTCTTAAGGACCAGACCCATGTCGATTAAATCCGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACCCAGAACCCAGTTGTTGTCTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGACTTGGAGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGGGGCAAACACATAGGTGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAACTCGAACCTTTGCTATCTGAAGCTAATGCTAAAAATTCAGAGACCTAA

Protein sequence

MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPMSIKSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDELGGKHIGGCTDTVKLYRKGELEPLLSEANAKNSET

Homology

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BLAST of Cla97C06G110560 vs. NCBI nr
Match: XP_004140671.2 (PREDICTED: glutaredoxin-C5, chloroplastic-like [Cucumis sativus] >KGN46358.1 hypothetical protein Csa_6G087860 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 3.4e-57
Identity = 142/184 (77.17%), Postives = 145/184 (78.80%), Query Frame = 0


Query: 1   MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPMSIK 60
           MAVPS+ TS   NSPR LSFFFKASV+ LPFY SCTSKSISISKHN   GF RTRPMSI 
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIX 70

Query: 61  SXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI 120
            XXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLGVQPLVI
Sbjct: 71  XXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVI 130

Query: 121 ELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANAK 160
           ELDEL                         GGKHIGGCTDTVKLYRKGELEP+LSEANAK
Sbjct: 131 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANAK 190

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BLAST of Cla97C06G110560 vs. NCBI nr
Match: XP_008459988.1 (PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 4.2e-55
Identity = 139/183 (75.96%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPMSIK 60
           MAVPS+ TS   NSPR LSFFFKASV+SLPFY SCTSKSISISKHN LNGF RT      
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNGFTRTXXXXXX 70

Query: 61  SXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI 120
            XXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI
Sbjct: 71  XXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI 130

Query: 121 ELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANAK 159
           ELDEL                         GGKHIGGCTDTVKLYRKGELEP+LSEANAK
Sbjct: 131 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANAK 190

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BLAST of Cla97C06G110560 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 1.6e-54
Identity = 134/185 (72.43%), Postives = 140/185 (75.68%), Query Frame = 0


Query: 1   MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPL-NGFLRTRPMSI 60
           MAVPS+ TSP L S R+LSFFFKASV SLPFY +C SKSISISKHN L NG  R RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60

Query: 61  KSXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 120
           ++     XXXXXXXX  SRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 61  RA---VSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 121 IELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANA 160
           IELDEL                         GGKHIGGCTDTVKLYRKGELEPLLSEANA
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180

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BLAST of Cla97C06G110560 vs. NCBI nr
Match: XP_022954295.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 213.0 bits (541), Expect = 7.4e-52
Identity = 135/185 (72.97%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 1   MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISIS-KHNPLNGFLRTRPMSI 60
           MAVPS+ TSP L S R+LSFFFKASV SLPFY +C SKSISIS KH   NG  R RPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH---NGSTRIRPMSI 60

Query: 61  KSXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 120
           ++   XXXXXXXXXXX SRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 61  RA--VXXXXXXXXXXXGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120

Query: 121 IELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANA 160
           IELDEL                         GGKHIGGCTDTVKLYRKGELEPLLSEANA
Sbjct: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180

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BLAST of Cla97C06G110560 vs. NCBI nr
Match: XP_022157516.1 (monothiol glutaredoxin-S10-like isoform X1 [Momordica charantia])

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 118/184 (64.13%), Postives = 131/184 (71.20%), Query Frame = 0


Query: 1   MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPMSIK 60
           MAV S+ TSP L SPR+LSFFFKASVYSLPF+ SCT KS SIS +N +NG  R++ +SIK
Sbjct: 1   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 60

Query: 61  SXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI 120
           +               SRLEESVK TI+QNPVVVYSKTWCSYSS+VKALFKRLGVQPLVI
Sbjct: 61  A-------VSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVI 120

Query: 121 ELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANAK 160
           ELDEL                         GGKHIGGCTDT+KL+RKGELEPLLSEANAK
Sbjct: 121 ELDELGLQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTMKLHRKGELEPLLSEANAK 177

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BLAST of Cla97C06G110560 vs. TrEMBL
Match: tr|A0A0A0KA52|A0A0A0KA52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.3e-57
Identity = 142/184 (77.17%), Postives = 145/184 (78.80%), Query Frame = 0


Query: 1   MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPMSIK 60
           MAVPS+ TS   NSPR LSFFFKASV+ LPFY SCTSKSISISKHN   GF RTRPMSI 
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRPMSIX 70

Query: 61  SXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI 120
            XXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLGVQPLVI
Sbjct: 71  XXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLVI 130

Query: 121 ELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANAK 160
           ELDEL                         GGKHIGGCTDTVKLYRKGELEP+LSEANAK
Sbjct: 131 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANAK 190

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BLAST of Cla97C06G110560 vs. TrEMBL
Match: tr|A0A1S3CB05|A0A1S3CB05_CUCME (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.8e-55
Identity = 139/183 (75.96%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MAVPSSLTSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPMSIK 60
           MAVPS+ TS   NSPR LSFFFKASV+SLPFY SCTSKSISISKHN LNGF RT      
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNGFTRTXXXXXX 70

Query: 61  SXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI 120
            XXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI
Sbjct: 71  XXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVI 130

Query: 121 ELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANAK 159
           ELDEL                         GGKHIGGCTDTVKLYRKGELEP+LSEANAK
Sbjct: 131 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANAK 190

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BLAST of Cla97C06G110560 vs. TrEMBL
Match: tr|M5W045|M5W045_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G210900 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35
Identity = 96/187 (51.34%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 1   MAVPSSL---TSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPM 60
           MAV ++L   TS  LNS R LS   K+S+ S P   +C+ +  S      +NG  R R  
Sbjct: 1   MAVSNNLTNFTSVSLNSARILSSTNKSSICSAPLSNNCSPRGSSSISLFSINGSRRWRSF 60

Query: 61  SIKSXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQP 120
           S+K+               SRLEESVK T+ +NPVVVYSKTWCSYSSEVK+LFKRLGV+P
Sbjct: 61  SVKA---------MASSFGSRLEESVKKTVDENPVVVYSKTWCSYSSEVKSLFKRLGVEP 120

Query: 121 LVIELDELG-------------------------GKHIGGCTDTVKLYRKGELEPLLSEA 160
           +VIELDELG                         GKHIGGCTDTVKLYRKGELEPLLSEA
Sbjct: 121 MVIELDELGPQGPQLQKVLERLTGQHTVPNVFIAGKHIGGCTDTVKLYRKGELEPLLSEA 178

[Close]

BLAST of Cla97C06G110560 vs. TrEMBL
Match: tr|A0A2I4H1F2|A0A2I4H1F2_9ROSI (monothiol glutaredoxin-S10-like OS=Juglans regia OX=51240 GN=LOC109012665 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.1e-34
Identity = 98/183 (53.55%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 1   MAVPSSL---TSPRLNSPRSLSFFFKASVYSLPFYKSCTSKSISISKHNPLNGFLRTRPM 60
           MAV S+L   TS  LNSPR+ S   K SV S+PF  +   ++ SIS     NG    RP 
Sbjct: 1   MAVASNLTNFTSLVLNSPRTFSPISKPSVCSIPFNNTRGLRTNSISSF-ATNGSRTHRPF 60

Query: 61  SIKSXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQP 120
           S+++               SRLE+SVK T+T+NPVVVYSKTWCSYSSEVK+LFKRLGVQP
Sbjct: 61  SVQA---------MASSFGSRLEDSVKKTVTENPVVVYSKTWCSYSSEVKSLFKRLGVQP 120

Query: 121 LVIELDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEA 156
            VIELDEL                         GGKHIGGCTDTVKLYR+GELEPLLSEA
Sbjct: 121 FVIELDELGPQGPQVQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRQGELEPLLSEA 173

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BLAST of Cla97C06G110560 vs. TrEMBL
Match: tr|A0A067FI40|A0A067FI40_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g030613mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33
Identity = 89/160 (55.62%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 1   MAVPSSL---TSPRLNSPRSLSFFFKAS---VYSLPFYKSCTSKSISISKHNPLNGFLRT 60
           MAVPS+L   TS  LN  RSLS    ++   V +  +Y   +  S+S++      G +  
Sbjct: 1   MAVPSNLTQFTSLSLNPSRSLSHIPTSNPGLVTANNYYTFSSRTSLSVNGRRRRYGAVSV 60

Query: 61  RPMSIKSXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG 120
           + M+                  SRLEESVK T+++NPVVVYSKTWCSYSSEVK LFKRLG
Sbjct: 61  QAMA--------------SSYGSRLEESVKKTVSENPVVVYSKTWCSYSSEVKLLFKRLG 120

Query: 121 VQPLVIELDELGGKHIGGCTDTVKLYRKGELEPLLSEANA 155
           V+PLVIELDE+GGKHIGGCTDTVKLYRKGELEPLLSEA +
Sbjct: 121 VEPLVIELDEMGGKHIGGCTDTVKLYRKGELEPLLSEAKS 146

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BLAST of Cla97C06G110560 vs. Swiss-Prot
Match: sp|Q8GWS0|GRXC5_ARATH (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.6e-27
Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 78  RLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDELG----------- 137
           R+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLGVQPLV+ELD+LG           
Sbjct: 68  RMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLE 127

Query: 138 --------------GKHIGGCTDTVKLYRKGELEPLLSEANAKNSET 160
                         GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 128 RLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

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BLAST of Cla97C06G110560 vs. Swiss-Prot
Match: sp|Q8LBS4|GRS12_ARATH (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 81/183 (44.26%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 5   SSLTSPRLNSPRSLSFFFKASVYS---LPFYKSCTSKSISISKHNPLNGFLRTRPMSIKS 64
           +++T   LNS  ++SF   + + +   LPF +      I I+   PL      R  S+K+
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPL------RCSSVKA 68

Query: 65  XXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIE 124
                   XXXXXXX   EE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L V+PLV+E
Sbjct: 69  ------MSXXXXXXXXXXEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVE 128

Query: 125 LDEL-------------------------GGKHIGGCTDTVKLYRKGELEPLLSEANAKN 160
           LD+L                         GGKHIGGC+DT++L+ KGELE +L+EAN KN
Sbjct: 129 LDQLGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEANGKN 179

[Close]

BLAST of Cla97C06G110560 vs. Swiss-Prot
Match: sp|Q0J3L4|GRS10_ORYSJ (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 5.3e-25
Identity = 59/100 (59.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 77  SRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDEL----------- 136
           SR+E+SVK T+  NPVV+YSK+WCSYS EVKALFKR+GVQP VIELD+L           
Sbjct: 57  SRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQPHVIELDQLGAQGPQLQKVL 116

Query: 137 --------------GGKHIGGCTDTVKLYRKGELEPLLSE 152
                         GGKHIGGCTDTVKL+RKGEL  +LSE
Sbjct: 117 ERLTGQSTVPNVFIGGKHIGGCTDTVKLHRKGELATMLSE 156

[Close]

BLAST of Cla97C06G110560 vs. Swiss-Prot
Match: sp|O81187|GLRX_VERFO (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.6e-11
Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 87  ITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDE---------------------- 146
           ++ N VVV+SKT+C Y + VK L  +LG Q  VIELD                       
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAEWTGQRTVPN 69

Query: 147 --LGGKHIGGCTDTVKLYRKGELEPLLSEANA 155
             +GGKHIGGC  T  ++++G+L PLL+EA A
Sbjct: 70  VFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGA 101

[Close]

BLAST of Cla97C06G110560 vs. Swiss-Prot
Match: sp|P55142|GRXC6_ORYSJ (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 38/95 (40.00%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 84  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDE------------------- 143
           K T+   PVVVYSK++C +   VK LF++LG     IELD                    
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66

Query: 144 -----LGGKHIGGCTDTVKLYRKGELEPLLSEANA 155
                + GKHIGGC DT+ L  +G+L PLL+EA A
Sbjct: 67  VPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGA 101

[Close]

BLAST of Cla97C06G110560 vs. TAIR10
Match: AT4G28730.1 (Glutaredoxin family protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-28
Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 78  RLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDELG----------- 137
           R+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLGVQPLV+ELD+LG           
Sbjct: 68  RMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLE 127

Query: 138 --------------GKHIGGCTDTVKLYRKGELEPLLSEANAKNSET 160
                         GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 128 RLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

[Close]

BLAST of Cla97C06G110560 vs. TAIR10
Match: AT2G20270.2 (Thioredoxin superfamily protein)

HSP 1 Score: 107.5 bits (267), Expect = 7.9e-24
Identity = 81/210 (38.57%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 5   SSLTSPRLNSPRSLSFFFKASVYS---LPFYKSCTSKSISISKHNPLNGFLRTRPMSIKS 64
           +++T   LNS  ++SF   + + +   LPF +      I I+   PL      R  S+K+
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPL------RCSSVKA 68

Query: 65  XXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIE 124
                   XXXXXXX   EE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L V+PLV+E
Sbjct: 69  ------MSXXXXXXXXXXEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVE 128

Query: 125 LDEL----------------------------------------------------GGKH 160
           LD+L                                                    GGKH
Sbjct: 129 LDQLVSLGKTSLPHDIGLKHLQKFWWFLAFPGSEGSQLQNVLEKITGQYTVPNVFIGGKH 188

[Close]

BLAST of Cla97C06G110560 vs. TAIR10
Match: AT5G20500.1 (Glutaredoxin family protein)

HSP 1 Score: 64.3 bits (155), Expect = 7.7e-11
Identity = 34/100 (34.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 83  VKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDE------------------ 142
           VK TI+ + +V++SK++C Y  + K++F+ L   P V+ELDE                  
Sbjct: 35  VKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIVGRR 94

Query: 143 ------LGGKHIGGCTDTVKLYRKGELEPLLSEANAKNSE 159
                 + GKH+GG  DTV  Y  GEL  LL  +  K +E
Sbjct: 95  TVPQVFINGKHLGGSDDTVDAYESGELAKLLGVSGNKEAE 134

[Close]

BLAST of Cla97C06G110560 vs. TAIR10
Match: AT5G63030.1 (Thioredoxin superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 8.5e-10
Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 84  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLVIELDELG----------------- 143
           K  ++  PVVV+SKT+C Y   VK L  +LG    V+ELDE+                  
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82

Query: 144 -------GKHIGGCTDTVKLYRKGELEPLLSEANA 155
                  G HIGGC   ++  ++G+L PLL+EA A
Sbjct: 83  VPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGA 117

[Close]

BLAST of Cla97C06G110560 vs. TAIR10
Match: AT5G40370.2 (Glutaredoxin family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 31/90 (34.44%), Postives = 43/90 (47.78%), Query Frame = 0


Query: 94  VYSKTWCSYSSEVKALFKRLGVQPLVIELDE------------------------LGGKH 153
           + SKT+C Y   VK L ++LG +   +ELD                         +GG H
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNH 101

Query: 154 IGGCTDTVKLYRKGELEPLLSEANAKNSET 160
           IGGC  T  L++ G+L PLL+EA A   +T
Sbjct: 102 IGGCDATSNLHKDGKLVPLLTEAGAIAGKT 131

The following BLAST results are available for this feature:

BLAST of Cla97C06G110560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140671.2	3.4e-57	77.17	PREDICTED: glutaredoxin-C5, chloroplastic-like [Cucumis sativus] >KGN46358.1 hyp...	[more]
XP_008459988.1	4.2e-55	75.96	PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo]	[more]
XP_023549357.1	1.6e-54	72.43	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954295.1	7.4e-52	72.97	glutaredoxin-C5, chloroplastic-like [Cucurbita moschata]	[more]
XP_022157516.1	1.6e-51	64.13	monothiol glutaredoxin-S10-like isoform X1 [Momordica charantia]	[more]

BLAST of Cla97C06G110560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA52\|A0A0A0KA52_CUCSA	2.3e-57	77.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=4 SV=1	[more]
tr\|A0A1S3CB05\|A0A1S3CB05_CUCME	2.8e-55	75.96	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=4 SV=1	[more]
tr\|M5W045\|M5W045_PRUPE	1.4e-35	51.34	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G210900 PE=4 SV=1	[more]
tr\|A0A2I4H1F2\|A0A2I4H1F2_9ROSI	2.1e-34	53.55	monothiol glutaredoxin-S10-like OS=Juglans regia OX=51240 GN=LOC109012665 PE=4 S...	[more]
tr\|A0A067FI40\|A0A067FI40_CITSI	1.3e-33	55.63	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g030613mg PE=4 SV=1	[more]

BLAST of Cla97C06G110560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWS0\|GRXC5_ARATH	5.6e-27	56.07	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
sp\|Q8LBS4\|GRS12_ARATH	1.1e-25	44.26	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
sp\|Q0J3L4\|GRS10_ORYSJ	5.3e-25	59.00	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]
sp\|O81187\|GLRX_VERFO	9.6e-11	40.22	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]
sp\|P55142\|GRXC6_ORYSJ	1.6e-10	40.00	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Cla97C06G110560 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28730.1	3.1e-28	56.07	Glutaredoxin family protein	[more]
AT2G20270.2	7.9e-24	38.57	Thioredoxin superfamily protein	[more]
AT5G20500.1	7.7e-11	34.00	Glutaredoxin family protein	[more]
AT5G63030.1	8.5e-10	35.79	Thioredoxin superfamily protein	[more]
AT5G40370.2	1.4e-07	34.44	Glutaredoxin family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0009055	electron carrier activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR002109	Glutaredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G110560.1	Cla97C06G110560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 92..124 e-value: 1.7E-6 score: 28.1
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 80..159 score: 9.3
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 72..125 e-value: 1.6E-14 score: 55.5 coord: 126..159 e-value: 2.9E-6 score: 28.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..83
None	No IPR available	PANTHER	PTHR10168:SF14	GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED	coord: 53..126 coord: 126..158
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 126..158
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 53..126
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 80..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G110560	Csa6G087860	Cucumber (Chinese Long) v2	cuwmbB468
Cla97C06G110560	MELO3C022405	Melon (DHL92) v3.5.1	mewmbB127
Cla97C06G110560	ClCG06G001290	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G110560	CSPI06G06870	Wild cucumber (PI 183967)	cpiwmbB495
Cla97C06G110560	Cucsa.348740	Cucumber (Gy14) v1	cgywmbB596
Cla97C06G110560	CmaCh17G013580	Cucurbita maxima (Rimu)	cmawmbB369
Cla97C06G110560	Lsi09G018100	Bottle gourd (USVL1VR-Ls)	lsiwmbB026
Cla97C06G110560	CsGy6G006880	Cucumber (Gy14) v2	cgybwmbB446
Cla97C06G110560	MELO3C022405.2	Melon (DHL92) v3.6.1	medwmbB118
Cla97C06G110560	Carg11529	Silver-seed gourd	carwmbB0011
Cla97C06G110560	CsaV3_6G007220	Cucumber (Chinese Long) v3	cucwmbB487

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G110560	Wax gourd	wgowmbB086
Cla97C06G110560	Watermelon (97103) v1	wmwmbB407