CmoCh17G013180 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCGTGATCTCAAACCGTCCATTTCTACTGGTTCTTCTTCGATTCTTCCTTATCATGTTTTTGAGTTTCTTTAATTTTCATATATTGCTGTTGCTTTGATTCTCGATTACACACCATGCTTTCCCCCGTTTAATTTTTTAGTATTTTTTTTTCAAGAATTTTGTTCCTGAGAGGATCGGTTTTGTTTGTTGCCACTATTCTTTTATAATTTCATTCCGGTTCCAATGTATTTAAGTTACTATTGTTGTTTAGTTCGATTTCGTTGCCTCGATGGATTTCATTTCTGGCCAATTATAGCTCAACTTCATTTCATTAATGAATGTTTGATGTTGTGTTATCTTTCTCTCACGTAATTTGGTATATTCTGTCATGAGAAGCCGTAAGTGATCTTGTATGTACTCCTGTTGTTCTTTAAACTGCACGTAAAAATTGCCTTAATTGATTACAAATCCAATATTTTGATCAGTAATGTCTCTCCTGTACTCCGCTATCGTTAGCTTTCTTCATCCAGTTTGTTGGGAGTTTGACCATAGTCCCAAATAATGAGCATATAAGTAGATAATAATGTCAATAATGAGCATATAAGTAGATAATAATGTCTTCAGTGATATGAGACCTTTCAGATAAGAAATCAAAAGTAAAATTATGCAGGCTTATGTTCAAAGTGGACAATATCATATCACCGTGGAGGGGGCTGTTGTCTTAATAAAAATTCATCTTTATATATAAACCTCAATATGTCATATTGATACCCTTGCGTATGAAGTAACGTTTAAACCATAGAAGCTACATTTGCTATTGTGTGACTACGTTTTGCAGTTATCCTTGTTTTCTCTAAATTGTTACAGGAAGTGAATTTCTACTTAGTAAAATTAAATGATTCCAAAAGTTTCTTCACTTGAGTAATAATTTTGATAAATCCTTCATGAACGTTCCTTATAGATAGTAACTGTCGGAAGAGAATAAAAGTTGGAGACCTTGATTGTGCTAGACCTTTGACATGCAGAAGAGATACTTCTCCCGTATCCTTGAAAGGACATGTTACATGCCGTGAGTTTTCTACATTACCCAACTCTCAATTGTACTTCCCTAGAGTAGCGAGCTATTCGAGGCTCCCAGTGTTCGCAGTTCTCTGTCTTTTTTTCTTTTTTGAGTTTTGTTCTAGTTAAGTTTCTTATTGTATTAGTGCATGATCCTTGTTAAATAGTTGAAATGTTGATATGTTTTCTTGTATGGGAGCGATGAGCAGCAAATAATGCAAAAACTTCTGAGTTTGCATTTTTTAAGAAGTTCAAGGAAGATGCAAACCGTAGATTCAGTTCATCTCTTCAACGTCAAAAGGAACTTCAACCAAAGAAGTTCAACTCGACTGATCATTTCAGAGGTAAGACATAAACGTTACTTGCAATATCAGTGTTAGCAGCAAATATACATATATATATATATATACTTTGGATGTGAACACGTGGATCTTTTTAAGAACTATACTTCCAGTGTCTGCCTTATCTGCACATGTGAGGCTAAGACCTTCCACTCAGCTCAATGTTGACATGTATTTTTTCTTCAAGTTTAACCCATTCTTGGAATCGACCATAAAAATGATAATATCAATATCTCCCAATAAAAGTTGGAAGTAACTTGTAACTTGTACCCATTATTTTGTTTCCAAGCAGAGAGAGCAAGGCATGTTGAAAATCGCCGTGAAGACTTCACATCACATCCTTTTGTTGAGAATGTTACTCCTATTAACTTTAACTCGATGCATTTACCCCTGGGTAATTCATCCAAAATTTCAGGTATGCACTTAAAGCAGACACTCGTTAATATTTGGTATTCCCTTTTCTGTTAATTCATCCTGACATGAGATTGAACGAAGATGTATAATTAAGTCGTCCCCAGTATTCTGTAACTCTATACTATGTATAGGAAAAATACATTTTCATCCATGTACTGAACTAAGACATTATGAGTTGTCAATACAAAATGAGTCGGAGATTTTCTTTCACACATTGCATGTATCAGTGTAATGTCTCTCAATTTGTTTATCGATATTTGGGTTTGCAGTACATGATGAAATGAGATCCCACAGGAAGACAAAACAGTTTCCAAATAGTAATTTGTGCTCTTTGTTTTATTGCAGAGGTAGATGTGAAGCACGCTCATAAAACATTTAAGGATATACAGAGCAAACAGAGAAACGTGGAAAATGATGGTAATTCTTTCGTCTGAGTTTCGTTCTCTCTCTTTTTCTTGCTTCTTTTTTTTTTAAAAAAAAATAGAGAATCACAATTTTGAGTTCTTATGAGCAAATGTTTCGTCTTTTGTGTATGCATATATTCCTTATCATTTTCCAATGGTTTCTTTTTTGGTCCATTTTTGCATTCTCAACAGAGTTGGGGAGCCTTGATCTTATAGTCTTAAAAAATTCTGAGCCATGTTCGTTAATGTGTAATGCATTCATTTAGTGGTCTACATTAGAAAGATAGATGGGATAGTCACGATAGCATATTTGATCAGGTACTCTTTATATTCATGCAGATATTTTTAGTAGGAAGAGGCAGAAATTACGTCAGTTCATTCAGAATATGTCGTTCCATGGAACTGGTGAATCATATGAGAAGAGGTCAGAGTCATCTTTGTTCTATCTGTTGTCCCGTCGTCTTTCTGGATCCGACTATGGAGTTTTTTGGAACTTGTCCAGGTATGGTGTTATTTCCACTCTACTTAGTCGGCTTATACCTGAAAGCAATCAGTATAAGGTATTATGCACTTTTACCATCTTCCAATAACTTCAACTTTTTTTTTTCTAATTCTTTTCTGAATTACTGGCTTTAGAATGAACCTGATTCTCGACAGTTTAATAATAACTTGGAAAAACTACAATGGTTGCCTGGAAGGTGCTGGCCAAGGCTTGATTATGAGCATCGTTTGAATAATAGTTCATCGCCTTGTCGTTTGAATAAATCAAGAGGCAGAGTTCTTTTCCACTCTGATTTCTCAACCAATAACGATGATGACAACTTCCACGTTAAGTACAGGACCAAGGAGTTTGACAGTGATGTAGAAGGGAAAATGACTTTGCTTGATGCCAATAGTTCACCTAGTACTGCTGCAGTTGAAAACTATAGACCACTTATCTCCACCCTTTTCAACCAGCAATACGGTTTCTATGATCAAGGTGAACCTTTGCACATAAGGAAGCAAGAGATGGAACCTCTTCTGCTGGGTTGGGATACGGACGACATAAAAGATGACAGTTCTAAATTTACAGAGTTCCACACATTTGCTGAGCCACCAATTTCGTTCGCTGATGATCATCAGCCAAACTTGCACGAGAGTTTTGGTGCTGTTGCACTTTGTTCTTCCCCTTTCCCTTCCAGTAATCATAGGGACTTATATTCATTGCCATACTCCAGTTTAGCCAGCTATCAAATCCATGGGTTAAGTAGGCCTAATGTAGAAAAAGAGGAAGGTATAGACGCCACTCTCAACAACGTGCATTTGAATTTCTCATCTGTACCCAAATGTCTTAGTCAGTGCGATAACTATGTCGATGACCGTGGCATCTGTGGCTTCTTCTGTGCACAAAGTGCTAATTGGCATATGAATTATGCGTTGGATGACGAACACCGGTATCCTTCTTTAGATAGTATGTGTGCTTCTGGCTTCGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAGCACTGCCAAACAGCTTACCATCTACTTGAGTACCCACTGGATGAAATGAGACCAACATCCCCTGTCAATGAAGAATGTAATATTGACAGTTCAGAATATGGACAGCCCTTCTTCATCCAACCCGAGTCGTTCTTTCAAGAAGGGAAGGTACGCTCTCTACTGACTGATAAACTTAGCTGGGATGTCACTAGAAGTGAAATAAATGTCGCTATAACTGAAATGGATTACGTTTGA ATGAAGCGTGATCTCAAACCGTCCATTTCTACTGGTTCTTCTTCGATTCTTCCTTATCATAATTTTGTTCCTGAGAGGATCGATAGTAACTGTCGGAAGAGAATAAAAGTTGGAGACCTTGATTGTGCTAGACCTTTGACATGCAGAAGAGATACTTCTCCCGTATCCTTGAAAGGACATGTTACATGCCCAAATAATGCAAAAACTTCTGAGTTTGCATTTTTTAAGAAGTTCAAGGAAGATGCAAACCGTAGATTCAGTTCATCTCTTCAACGTCAAAAGGAACTTCAACCAAAGAAGTTCAACTCGACTGATCATTTCAGAGAGAGAGCAAGGCATGTTGAAAATCGCCGTGAAGACTTCACATCACATCCTTTTGTTGAGAATGTTACTCCTATTAACTTTAACTCGATGCATTTACCCCTGGGTAATTCATCCAAAATTTCAGTACATGATGAAATGAGATCCCACAGGAAGACAAAACAGTTTCCAAATAAGGTAGATGTGAAGCACGCTCATAAAACATTTAAGGATATACAGAGCAAACAGAGAAACGTGGAAAATGATGTGGTCTACATTAGAAAGATAGATGGGATAGTCACGATAGCATATTTGATCAGGAAGAGGCAGAAATTACGTCAGTTCATTCAGAATATGTCGTTCCATGGAACTGGTGAATCATATGAGAAGAGGTATGGTGTTATTTCCACTCTACTTAGTCGGCTTATACCTGAAAGCAATCAGTATAAGAATGAACCTGATTCTCGACAGTTTAATAATAACTTGGAAAAACTACAATGGTTGCCTGGAAGGTGCTGGCCAAGGCTTGATTATGAGCATCGTTTGAATAATAGTTCATCGCCTTGTCGTTTGAATAAATCAAGAGGCAGAGTTCTTTTCCACTCTGATTTCTCAACCAATAACGATGATGACAACTTCCACGTTAAGTACAGGACCAAGGAGTTTGACAGTGATGTAGAAGGGAAAATGACTTTGCTTGATGCCAATAGTTCACCTAGTACTGCTGCAGTTGAAAACTATAGACCACTTATCTCCACCCTTTTCAACCAGCAATACGGTTTCTATGATCAAGGTGAACCTTTGCACATAAGGAAGCAAGAGATGGAACCTCTTCTGCTGGGTTGGGATACGGACGACATAAAAGATGACAGTTCTAAATTTACAGAGTTCCACACATTTGCTGAGCCACCAATTTCGTTCGCTGATGATCATCAGCCAAACTTGCACGAGAGTTTTGGTGCTGTTGCACTTTGTTCTTCCCCTTTCCCTTCCAGTAATCATAGGGACTTATATTCATTGCCATACTCCAGTTTAGCCAGCTATCAAATCCATGGGTTAAGTAGGCCTAATGTAGAAAAAGAGGAAGGTATAGACGCCACTCTCAACAACGTGCATTTGAATTTCTCATCTGTACCCAAATGTCTTAGTCAGTGCGATAACTATGTCGATGACCGTGGCATCTGTGGCTTCTTCTGTGCACAAAGTGCTAATTGGCATATGAATTATGCGTTGGATGACGAACACCGGTATCCTTCTTTAGATAGTATGTGTGCTTCTGGCTTCGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAGCACTGCCAAACAGCTTACCATCTACTTGAGTACCCACTGGATGAAATGAGACCAACATCCCCTGTCAATGAAGAATGTAATATTGACAGTTCAGAATATGGACAGCCCTTCTTCATCCAACCCGAGTCGTTCTTTCAAGAAGGGAAGGTACGCTCTCTACTGACTGATAAACTTAGCTGGGATGTCACTAGAAGTGAAATAAATGTCGCTATAACTGAAATGGATTACGTTTGA ATGAAGCGTGATCTCAAACCGTCCATTTCTACTGGTTCTTCTTCGATTCTTCCTTATCATAATTTTGTTCCTGAGAGGATCGATAGTAACTGTCGGAAGAGAATAAAAGTTGGAGACCTTGATTGTGCTAGACCTTTGACATGCAGAAGAGATACTTCTCCCGTATCCTTGAAAGGACATGTTACATGCCCAAATAATGCAAAAACTTCTGAGTTTGCATTTTTTAAGAAGTTCAAGGAAGATGCAAACCGTAGATTCAGTTCATCTCTTCAACGTCAAAAGGAACTTCAACCAAAGAAGTTCAACTCGACTGATCATTTCAGAGAGAGAGCAAGGCATGTTGAAAATCGCCGTGAAGACTTCACATCACATCCTTTTGTTGAGAATGTTACTCCTATTAACTTTAACTCGATGCATTTACCCCTGGGTAATTCATCCAAAATTTCAGTACATGATGAAATGAGATCCCACAGGAAGACAAAACAGTTTCCAAATAAGGTAGATGTGAAGCACGCTCATAAAACATTTAAGGATATACAGAGCAAACAGAGAAACGTGGAAAATGATGTGGTCTACATTAGAAAGATAGATGGGATAGTCACGATAGCATATTTGATCAGGAAGAGGCAGAAATTACGTCAGTTCATTCAGAATATGTCGTTCCATGGAACTGGTGAATCATATGAGAAGAGGTATGGTGTTATTTCCACTCTACTTAGTCGGCTTATACCTGAAAGCAATCAGTATAAGAATGAACCTGATTCTCGACAGTTTAATAATAACTTGGAAAAACTACAATGGTTGCCTGGAAGGTGCTGGCCAAGGCTTGATTATGAGCATCGTTTGAATAATAGTTCATCGCCTTGTCGTTTGAATAAATCAAGAGGCAGAGTTCTTTTCCACTCTGATTTCTCAACCAATAACGATGATGACAACTTCCACGTTAAGTACAGGACCAAGGAGTTTGACAGTGATGTAGAAGGGAAAATGACTTTGCTTGATGCCAATAGTTCACCTAGTACTGCTGCAGTTGAAAACTATAGACCACTTATCTCCACCCTTTTCAACCAGCAATACGGTTTCTATGATCAAGGTGAACCTTTGCACATAAGGAAGCAAGAGATGGAACCTCTTCTGCTGGGTTGGGATACGGACGACATAAAAGATGACAGTTCTAAATTTACAGAGTTCCACACATTTGCTGAGCCACCAATTTCGTTCGCTGATGATCATCAGCCAAACTTGCACGAGAGTTTTGGTGCTGTTGCACTTTGTTCTTCCCCTTTCCCTTCCAGTAATCATAGGGACTTATATTCATTGCCATACTCCAGTTTAGCCAGCTATCAAATCCATGGGTTAAGTAGGCCTAATGTAGAAAAAGAGGAAGGTATAGACGCCACTCTCAACAACGTGCATTTGAATTTCTCATCTGTACCCAAATGTCTTAGTCAGTGCGATAACTATGTCGATGACCGTGGCATCTGTGGCTTCTTCTGTGCACAAAGTGCTAATTGGCATATGAATTATGCGTTGGATGACGAACACCGGTATCCTTCTTTAGATAGTATGTGTGCTTCTGGCTTCGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAGCACTGCCAAACAGCTTACCATCTACTTGAGTACCCACTGGATGAAATGAGACCAACATCCCCTGTCAATGAAGAATGTAATATTGACAGTTCAGAATATGGACAGCCCTTCTTCATCCAACCCGAGTCGTTCTTTCAAGAAGGGAAGGTACGCTCTCTACTGACTGATAAACTTAGCTGGGATGTCACTAGAAGTGAAATAAATGTCGCTATAACTGAAATGGATTACGTTTGA
BLAST of CmoCh17G013180 vs. TrEMBL
Match: A0A0A0K889_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G329370 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94 Identity = 192/297 (64.65%), Postives = 225/297 (75.76%), Query Frame = 1
BLAST of CmoCh17G013180 vs. TrEMBL
Match: A0A067K2D8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17593 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 9.4e-21 Identity = 90/255 (35.29%), Postives = 118/255 (46.27%), Query Frame = 1
BLAST of CmoCh17G013180 vs. TrEMBL
Match: V4TYU0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019870mg PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 9.1e-16 Identity = 117/463 (25.27%), Postives = 190/463 (41.04%), Query Frame = 1
BLAST of CmoCh17G013180 vs. TrEMBL
Match: W9QPE7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015921 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.5e-15 Identity = 152/602 (25.25%), Postives = 241/602 (40.03%), Query Frame = 1
BLAST of CmoCh17G013180 vs. TrEMBL
Match: A5AQ34_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026181 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14 Identity = 100/381 (26.25%), Postives = 170/381 (44.62%), Query Frame = 1
BLAST of CmoCh17G013180 vs. NCBI nr
Match: gi|659124094|ref|XP_008461985.1| (PREDICTED: uncharacterized protein LOC103500465 [Cucumis melo]) HSP 1 Score: 802.7 bits (2072), Expect = 4.4e-229 Identity = 428/627 (68.26%), Postives = 482/627 (76.87%), Query Frame = 1
BLAST of CmoCh17G013180 vs. NCBI nr
Match: gi|778726776|ref|XP_011659159.1| (PREDICTED: uncharacterized protein LOC101207408 [Cucumis sativus]) HSP 1 Score: 722.6 bits (1864), Expect = 5.7e-205 Identity = 404/627 (64.43%), Postives = 458/627 (73.05%), Query Frame = 1
BLAST of CmoCh17G013180 vs. NCBI nr
Match: gi|700189319|gb|KGN44552.1| (hypothetical protein Csa_7G329370 [Cucumis sativus]) HSP 1 Score: 355.5 bits (911), Expect = 1.8e-94 Identity = 192/297 (64.65%), Postives = 225/297 (75.76%), Query Frame = 1
BLAST of CmoCh17G013180 vs. NCBI nr
Match: gi|731396290|ref|XP_010652444.1| (PREDICTED: uncharacterized protein LOC104879826 isoform X1 [Vitis vinifera]) HSP 1 Score: 157.1 bits (396), Expect = 9.6e-35 Identity = 184/657 (28.01%), Postives = 292/657 (44.44%), Query Frame = 1
BLAST of CmoCh17G013180 vs. NCBI nr
Match: gi|731396292|ref|XP_010652445.1| (PREDICTED: uncharacterized protein LOC104879826 isoform X2 [Vitis vinifera]) HSP 1 Score: 132.1 bits (331), Expect = 3.3e-27 Identity = 171/642 (26.64%), Postives = 279/642 (43.46%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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