CmaCh17G012430 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G012430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	INO80 complex subunit D
Location	Cma_Chr17 : 8510937 .. 8516121 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCCTAAATTCTGCGCCCCTTATCTTGCTTCTCCCTCCCGTTGCCGCCGCCACACAGTTATCAGCACCGGTTTGTTTTTCCCTCTTCGCTGCAGTCGCACGCTATCACCCTCCATCGGTAACGTCCGTTTCTTCCTTCTCTCCTTATCTCCCTCTCTGCCCCAACCTCGCCGGCACGGCTGCCTAGTCTTCTTCTTCTCGTCGCCGACTGCCCACCGAATTTTCTGCTCGTCGCTAAGGTGCCACTCTGTCTTCCGAAACCTCTCCTCTCTCATGCTCGTTACTGAGTTCGCATGGATTTTTTTTTTTTTCTTTCTTTCTTCAATTCAAGCAATTCTCTTAAATAGGGTAAAATTGGGAGAGGTTAAATTTGATCTAAAATACTGCCAAATCGACCTATTTTCGACTGGTTTTTTTTGGGTTAAGGAGGTATTTTTAGATGATTGAGGAGTTTGCTATGTAAGGTTGTTTTGCTTATTTGGATTGTTCTAATTGAGAATTATGTATTCTGGAAAGTATCTTTCTTATATGCACTCATTTTCAGCCGGTAGTTGAAGTAAATTTAGTATAGATTTTGATTTTACATGAATTGGGGGATTGAGTGAAGCATTTGATAGAGTCTTGGTGCTCTATAGTCTTCACGAAGAGAATAGGGTGATCAGAGCACAGAATTCTTTTTTTATTTTTTAAACATCAGTGGATTATGCAGTTATTCGTTTCTATAGAATTGTTCTACACCCCTGCAAATTGCATTAGGAATAATCGTTTGGAATGTGACAACTTGGTAGGTCATGGCAGAATCAAACTCGCCTGGTTCGTTTCAATCTCCTCCTGCTCCCCCACATCCTATGGTTATTGATGGGGCGAATCACGATCTAGCTCTAGCCTCTTGTGAGTTTTTTACTCGTCGAGAAGTACTAGAGCGTCGATCCCGGAGAGTGAAACAACTTTGTCGAGTATATAGGGAACTGTACTGGGCTTTAATGGAGGAACTCAAGCGCAAGTACAGGGAGTATTATTGGACATATGGCAAGAGTCCATTTAAGGAGGACGAGAAGGAGGCTGAGGGCATTGGTGATTATCCAGAGGGTATTGGGGAGAATGGAAAGCTAGGATTAGGTTCCGTGACCGGGAGTGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAAAATACTGTCATGCTCATATCCTCTCAGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTAATCAAGAGGTTTGCATTTTATATAAATTATTTTCGCTGCTTAGTAATACTATGAGTTTTCTACTTAATAAGCAATAGCCATAAATATAGACTCGTCTAGTATTGATATCATTACGACTATTTATAAGGATCTTGAGTTTCTTTTTTTTCTCTTTGGACTGTCTTAAGGTATAATTTTGCTAGAGCTCGTCCGAGTAGATCCTAAGGATAAAGGCTGTATAAAAGCTTTTGTAATGCTCAAGTCTTCCCAAATTCCTATTGTAGAATGTAGCACCATTTCCAATCCTCTTAGTTAAAGAACAATGGTTATCATCTATCTATTGCTTGAATTTACCAAGTGAAAACCATGTGGTAAGAAACCAACCAAGCTTATTACAATATTTGCAGGAAATTTATTGCCCCAAGGCCTGTAGGCATTTTTTGTGCCCCAATCCCAAATTATGAGGGCAATGTAAGTGAGCTGAATCTAATCTAATTAATGAAATGCAGCCTCCTCGGCCCAAGTCTACCGCTAGCCGATATTGTCCTCTTTGAGCTTTCCCTTTAGGCTTCCCCTCAAGGTTTTTAAAATACATCTGCTAGGAGGTTTCCATACTCTTATAAAGAATGCTTCATTCTCCTCCTCAACCGATATGGGATCTCATATGCTCATTCCCAAAGAACTCTCGAATATTTGTAGTGATCCTTGTCATTCCCTCCGTACAGTTTAATGATTTTTTTTATAATTGAAAGGTAGTCAACATGGTTGAGCTGAATTAGAAGGTCACACCTTTTGATTGCATTGATCTGAAGTTGATGTCCACACACTTTGGTTAAGCTTTTTATTTTTCATTTGGGGTCTTCTGTATTTGTATCCTTTTCTGGAATTAGAAGCAATGTACATTTACTTTTGGTATAATGGGTAGGCATAGATGTGTTGTGTTGAGGAAACTATGTTTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTCCGTTAACAAGAAATTTTCTTTCATTTACAGTATGCAGTCCGGACCACTTCTATGTTCAAAGCCTGTTTTAAGGTCTACTGTTCCCTGCTACTGCCCTGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTAGAGATTTAAGAAAGGCAGGTCTTAACGTCTCCTCGACTAGTAAACTTCGTCCTGATTTCCATGTATTAGTAGCTGAGTGCGTTCGCCAAATACAAGTCAAAAGAAGGGCGGCGAGAAAGGCCACTGCTGTTAAAATCGAAAGCAACTGAGAAGGTGAAGACTAGTTGTTAGGCCCCTCAGTTTGAATAAGAACATGTTGCAGTTGGTACATGTGTATTCAATCCAACCCGAAACCCCCAATGGAAGAATTTGTTGATAAAACCAATTTTCGTGTACGATCCAATCCCTTGTTCCTTCCTCTCCCTCGCTGCACATTTGTGTAATATTCGAGCAAGATGCAATGTGCTGATGATTAGCAGATTGTTGGGATGTACATTCCTTCTCTTGTTTTTATGAAAGGACGTTTTAGTGTCAGCTTCCTTCTCTACAGGGTTTGATGGTATCATTTTTCCCAGCTTGCAATAAAGGATTATAATCAATAGTTCGGGATGAAAATGAATGTATTTCGAGTTTTATTTCATTTTAGTATGAAAAGTAAATTTTTTACAAGGTAACTGCTACCATATTAATCAAAACACAACCCAGAGACCAAATATCTAAGGAGGGTGTAATCTCACCAATAAAAGACTCAGGAGACATGTATTCAGGCGTCCCTCTAAAACTCAATTTATAACCAAAACTTCTTTGCAAGACCAAAGTCGGCTATTTTGAGGTCGGGTTTGTCATGTTGAGAGGGAAAAAACAAGAACATTAGAAGGTTTGAAATCACAATGCACAAAGCCTTTGGAATGAATGCAAGAAAGCCCTGTAAGCATCATACGAAGATACCCTTTGAGCTCATCCTCCCGCAGCTTCTTGCGTTGGTTGATAAGGTCATCCAAAGACCCACCGGCGGTGTACTCCAAAACCAGATTGTAAACGCTGTACTTGGTGTCGTCTTCGACGGTGACTTGGTGGCCGATGAGCTGCAGGATATGGGGGCAGCCGATGAATTTGGACAAGATGAGGGCTTCTTTGGTGAGTGAGTAGGCTTGGCGTGCGAGAGTCAGTTTGCTAAATAGGGTTTTTTTTTTCTCTCTCTCTCTTCGAAAAGAAAAATAATATTTATAAGCTTACCTCGGACATGGCACTCGGACATGGCAGAATGAGGAGTAATGTTGACCTTCTTCGTCCTCTCGGCCGAGAATGTTGTGCACACTGACAATGGAGGCACTCTTTTCCCCCTGCACTTTCACATTCTCACGGCTGATTTCACGAACACACCCTGAATATTTCGTTTCATAGTCCTCGCTAAAAACGTAGATCAGATTCTCCTGTCCAACGCATTTCATTTCCATTCTCACGCAGATCGCTCGGCGTGACGGAAATCTCGAGGAATTCCATGGTCTCCACATCAATTTTCCACAGAACGAAGGAAGGACCGGCAGGGGAATTGCAGAGTCCCGCCAAAACAAGGCGGTCGGTGCAAGAAATTAAAAATGAAAACATATTTCCAGGAGGTTGAAGAGTTTGGACTTCACTCCATACATGATCGTGTAAATCGAAGCAAGAAACTAAGGAGGAGTGACTTCCGAGAACGTAGAACTTACCTTCGAACAAAGCGGAAGAGAGAGAGCGCGAGGAGATTCCGGACCTGAAATCCGGGGGCAATGGCGAATAGAGCTCCCAAAAATCAGCGTCCGGATCGTAAATCTCGACAGATAAATGGGCGGCCGCCTAGCAGTCGTACGCCTTCGACGACGATAAACTGGAGATTCGACTTGGATCCGGATCGGAAAATTCCGAGGAGAGGATCTATCCGTGCGAATCTGAGAGGCGAAGTGACGATCCAAGAGGGATTGAAGATCGGAGAGAAAGAGAAGTGAGGCGCGGTAGTGAAGAAGAAGCCGTCGGAGCGAAGGAAGGAGGAGACAGGAGAGACCGGCACCGGGGGGAGGCGGAACCAGAGATCAGAGAGAGGATCGAAGGCAAAGAACTGATTGTCCTTCGAGTCGGAGGTGAGGTTGGAAAATTCAGCCATTGGTGGAAAGAGGGAGCTCGAGAGGACATCAATGGCGGCTACCACTAAAATAGGTATTTGTTATCCATCAACTCCGGGTTTGCAACCATGAATCTGGTTCCATGTTTACAACCAAAATTTACACAAATTACCACTTCTGAGCAAATTTGGTATGGCTTAACAAAGAGAGAGATTTCTCTGAACACAAAAGTAATTCTCAATGTCTCATTTCTCTTTCCCATAAAATTGCAACCCTTAAGAGAGTTCAAAAAAGA

mRNA sequence

AAACCCTAAATTCTGCGCCCCTTATCTTGCTTCTCCCTCCCGTTGCCGCCGCCACACAGTTATCAGCACCGGTTTGTTTTTCCCTCTTCGCTGCAGTCGCACGCTATCACCCTCCATCGGTAACGTCCGTTTCTTCCTTCTCTCCTTATCTCCCTCTCTGCCCCAACCTCGCCGGCACGGCTGCCTAGTCTTCTTCTTCTCGTCGCCGACTGCCCACCGAATTTTCTGCTCGTCGCTAAGGTCATGGCAGAATCAAACTCGCCTGGTTCGTTTCAATCTCCTCCTGCTCCCCCACATCCTATGGTTATTGATGGGGCGAATCACGATCTAGCTCTAGCCTCTTGTGAGTTTTTTACTCGTCGAGAAGTACTAGAGCGTCGATCCCGGAGAGTGAAACAACTTTGTCGAGTATATAGGGAACTGTACTGGGCTTTAATGGAGGAACTCAAGCGCAAGTACAGGGAGTATTATTGGACATATGGCAAGAGTCCATTTAAGGAGGACGAGAAGGAGGCTGAGGGCATTGGTGATTATCCAGAGGGTATTGGGGAGAATGGAAAGCTAGGATTAGGTTCCGTGACCGGGAGTGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAAAATACTGTCATGCTCATATCCTCTCAGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTAATCAAGAGTATGCAGTCCGGACCACTTCTATGTTCAAAGCCTGTTTTAAGGTCTACTGTTCCCTGCTACTGCCCTGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTAGAGATTTAAGAAAGGCAGGTCTTAACGTCTCCTCGACTAGTAAACTTCGTCCTGATTTCCATGTATTAGTAGCTGAGTGCGTTCGCCAAATACAAGTCAAAAGAAGGGCGGCGAGAAAGGCCACTGCTGTTAAAATCGAAAGCAACTGAGAAGGTGAAGACTAGTTGTTAGGCCCCTCAGTTTGAATAAGAACATGTTGCAGTTGGTACATGTGTATTCAATCCAACCCGAAACCCCCAATGGAAGAATTTGTTGATAAAACCAATTTTCGTGTACGATCCAATCCCTTGTTCCTTCCTCTCCCTCGCTGCACATTTGTGTAATATTCGAGCAAGATGCAATGTGCTGATGATTAGCAGATTGTTGGGATGTACATTCCTTCTCTTGTTTTTATGAAAGGACGTTTTAGTGTCAGCTTCCTTCTCTACAGGGTTTGATGGTATCATTTTTCCCAGCTTGCAATAAAGGATTATAATCAATAGTTCGGGATGAAAATGAATGTATTTCGAGTTTTATTTCATTTTAGTATGAAAAGTAAATTTTTTACAAGGTAACTGCTACCATATTAATCAAAACACAACCCAGAGACCAAATATCTAAGGAGGGTGTAATCTCACCAATAAAAGACTCAGGAGACATGTATTCAGGCGTCCCTCTAAAACTCAATTTATAACCAAAACTTCTTTGCAAGACCAAAGTCGGCTATTTTGAGGTCGGGTTTGTCATGTTGAGAGGGAAAAAACAAGAACATTAGAAGGTTTGAAATCACAATGCACAAAGCCTTTGGAATGAATGCAAGAAAGCCCTGTAAGCATCATACGAAGATACCCTTTGAGCTCATCCTCCCGCAGCTTCTTGCGTTGGTTGATAAGGTCATCCAAAGACCCACCGGCGGTGTACTCCAAAACCAGATTGTAAACGCTGTACTTGGTGTCGTCTTCGACGGTGACTTGGTGGCCGATGAGCTGCAGGATATGGGGGCAGCCGATGAATTTGGACAAGATGAGGGCTTCTTTGGTGAGTGAGTAGGCTTGGCGTGCGAGAGTCAGTTTGCTAAATAGGGTTTTTTTTTTCTCTCTCTCTCTTCGAAAAGAAAAATAATATTTATAAGCTTACCTCGGACATGGCACTCGGACATGGCAGAATGAGGAGTAATGTTGACCTTCTTCGTCCTCTCGGCCGAGAATGTTGTGCACACTGACAATGGAGGCACTCTTTTCCCCCTGCACTTTCACATTCTCACGGCTGATTTCACGAACACACCCTGAATATTTCGTTTCATAGTCCTCGCTAAAAACGTAGATCAGATTCTCCTGTCCAACGCATTTCATTTCCATTCTCACGCAGATCGCTCGGCGTGACGGAAATCTCGAGGAATTCCATGGTCTCCACATCAATTTTCCACAGAACGAAGGAAGGACCGGCAGGGGAATTGCAGAGTCCCGCCAAAACAAGGCGGTCGGTGCAAGAAATTAAAAATGAAAACATATTTCCAGGAGGTTGAAGAGTTTGGACTTCACTCCATACATGATCGTGTAAATCGAAGCAAGAAACTAAGGAGGAGTGACTTCCGAGAACGTAGAACTTACCTTCGAACAAAGCGGAAGAGAGAGAGCGCGAGGAGATTCCGGACCTGAAATCCGGGGGCAATGGCGAATAGAGCTCCCAAAAATCAGCGTCCGGATCGTAAATCTCGACAGATAAATGGGCGGCCGCCTAGCAGTCGTACGCCTTCGACGACGATAAACTGGAGATTCGACTTGGATCCGGATCGGAAAATTCCGAGGAGAGGATCTATCCGTGCGAATCTGAGAGGCGAAGTGACGATCCAAGAGGGATTGAAGATCGGAGAGAAAGAGAAGTGAGGCGCGGTAGTGAAGAAGAAGCCGTCGGAGCGAAGGAAGGAGGAGACAGGAGAGACCGGCACCGGGGGGAGGCGGAACCAGAGATCAGAGAGAGGATCGAAGGCAAAGAACTGATTGTCCTTCGAGTCGGAGGTGAGGTTGGAAAATTCAGCCATTGGTGGAAAGAGGGAGCTCGAGAGGACATCAATGGCGGCTACCACTAAAATAGGTATTTGTTATCCATCAACTCCGGGTTTGCAACCATGAATCTGGTTCCATGTTTACAACCAAAATTTACACAAATTACCACTTCTGAGCAAATTTGGTATGGCTTAACAAAGAGAGAGATTTCTCTGAACACAAAAGTAATTCTCAATGTCTCATTTCTCTTTCCCATAAAATTGCAACCCTTAAGAGAGTTCAAAAAAGA

Coding sequence (CDS)

ATGGCAGAATCAAACTCGCCTGGTTCGTTTCAATCTCCTCCTGCTCCCCCACATCCTATGGTTATTGATGGGGCGAATCACGATCTAGCTCTAGCCTCTTGTGAGTTTTTTACTCGTCGAGAAGTACTAGAGCGTCGATCCCGGAGAGTGAAACAACTTTGTCGAGTATATAGGGAACTGTACTGGGCTTTAATGGAGGAACTCAAGCGCAAGTACAGGGAGTATTATTGGACATATGGCAAGAGTCCATTTAAGGAGGACGAGAAGGAGGCTGAGGGCATTGGTGATTATCCAGAGGGTATTGGGGAGAATGGAAAGCTAGGATTAGGTTCCGTGACCGGGAGTGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAAAATACTGTCATGCTCATATCCTCTCAGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTAATCAAGAGTATGCAGTCCGGACCACTTCTATGTTCAAAGCCTGTTTTAAGGTCTACTGTTCCCTGCTACTGCCCTGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTAGAGATTTAAGAAAGGCAGGTCTTAACGTCTCCTCGACTAGTAAACTTCGTCCTGATTTCCATGTATTAGTAGCTGAGTGCGTTCGCCAAATACAAGTCAAAAGAAGGGCGGCGAGAAAGGCCACTGCTGTTAAAATCGAAAGCAACTGA

Protein sequence

MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRRCDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIESN

Homology

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BLAST of CmaCh17G012430 vs. Swiss-Prot
Match: IN80D_DICDI (INO80 complex subunit D OS=Dictyostelium discoideum GN=DDB_G0288447 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 1


Query: 116 DEIRRCDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRST 175
           +E   C    CK K M L+KYC++HIL DK Q+L+  CT+ + + +     C  P+L+  
Sbjct: 526 EEGNLCLSVNCKVKPMLLSKYCYSHILQDKDQKLFHECTYQLSANKK----CGYPILKVQ 585

Query: 176 VPCYCPGHL 185
           +P  C  HL
Sbjct: 586 IPTLCREHL 590

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BLAST of CmaCh17G012430 vs. TrEMBL
Match: A0A0A0K4I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G337070 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 6.1e-117
Identity = 210/241 (87.14%), Postives = 223/241 (92.53%), Query Frame = 1


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQ PP  P P++IDGA+ D ALA+    +RREVLERRSRR KQLCR+++EL
Sbjct: 1   MAESNSPGSFQPPPVTPLPILIDGADRDRALATSMICSRREVLERRSRRAKQLCRIFKEL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGL S TGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLASATGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
            GHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVL+AE VRQIQ KRRA ++ATA+KIES
Sbjct: 181 SGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLIAEYVRQIQSKRRATKRATAIKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

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BLAST of CmaCh17G012430 vs. TrEMBL
Match: W9SSR1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011783 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75
Identity = 147/228 (64.47%), Postives = 173/228 (75.88%), Query Frame = 1


Query: 14  PAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYR 73
           P+P  PM IDG++ D ALA   + +RREVLERR R  KQL RVYR  YWALME++K K+R
Sbjct: 30  PSPSSPMTIDGSDRDAALAKSAWLSRREVLERRCRLAKQLARVYRHHYWALMEDVKAKHR 89

Query: 74  EYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLG--SVTGSDEIRRCDVTGCKAKAM 133
           +YYWT+GKSPFK+DE  A           ENGKLGLG  +  G D+I+RC VTGCK KAM
Sbjct: 90  DYYWTFGKSPFKDDETAAAA------ATAENGKLGLGLGNSGGGDDIKRCQVTGCKTKAM 149

Query: 134 ALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCL 193
           ALTK+CHAHIL+D +Q+LY+GC +VIKSMQSGPL C KP+LRST P  CP H QKGEKCL
Sbjct: 150 ALTKFCHAHILNDPQQKLYRGCQYVIKSMQSGPLKCCKPILRSTAPPLCPTHFQKGEKCL 209

Query: 194 ARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIE 240
            RDLRKAGLNVSS + L P FHV+VAE + QIQ KRRAARKA+  K+E
Sbjct: 210 IRDLRKAGLNVSSLTNLAPKFHVIVAEYICQIQSKRRAARKASVRKVE 251

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BLAST of CmaCh17G012430 vs. TrEMBL
Match: F6I221_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00060 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.2e-66
Identity = 129/215 (60.00%), Postives = 166/215 (77.21%), Query Frame = 1


Query: 28  DLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWTYGKSPFKED 87
           D  L+S  + TR+EV+ RRSRRVKQL + YR  YW+LM+ELK +YREYYW YG+S F+ED
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLAKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 88  EK-EAEGIGDYPEGIGENGKLGLGSVTGSD--EIRRCDVTGCKAKAMALTKYCHAHILSD 147
           EK E EG+    E +  +GKLGLG   G +  +++RC V+GCK+KAMALT++CH HILSD
Sbjct: 76  EKREGEGVEGTGENLNGHGKLGLGLGIGENGFDVKRCAVSGCKSKAMALTRFCHPHILSD 135

Query: 148 KKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSS 207
            KQ+LYKGC+FVIKS+Q+GP+LC KP+LRSTVP  CP H QK E+ +   L+KAGLN +S
Sbjct: 136 SKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNALKKAGLNAAS 195

Query: 208 TSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIE 240
           +SKL P FHV+VAE V QIQ KRRAA++A+  K+E
Sbjct: 196 SSKLAPKFHVIVAEYVHQIQTKRRAAQRASVNKVE 230

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BLAST of CmaCh17G012430 vs. TrEMBL
Match: F6I219_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00020 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.9e-66
Identity = 129/215 (60.00%), Postives = 166/215 (77.21%), Query Frame = 1


Query: 28  DLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWTYGKSPFKED 87
           D  L+S  + TR+EV+ RRSRRVKQL + YR  YW+LM+ELK +YREYYW YG+S F+ED
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLSKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 88  EK-EAEGIGDYPEGIGENGKLGLGSVTGSD--EIRRCDVTGCKAKAMALTKYCHAHILSD 147
           EK E EG+    E +  +GKLGLG   G +  +++RC V+GCK+KAMALT++CH HILSD
Sbjct: 76  EKREGEGVEGTGENLNGHGKLGLGLGIGENGFDVKRCAVSGCKSKAMALTRFCHPHILSD 135

Query: 148 KKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSS 207
            KQ+LYKGC+FVIKS+Q+GP+LC KP+LRSTVP  CP H QK E+ +   L+KAGLN +S
Sbjct: 136 SKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNALKKAGLNAAS 195

Query: 208 TSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIE 240
           +SKL P FHV+VAE V QIQ KRRAA++A+  K+E
Sbjct: 196 SSKLAPKFHVIVAEYVHQIQTKRRAAQRASVNKVE 230

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BLAST of CmaCh17G012430 vs. TrEMBL
Match: A0A067JSQ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18075 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.7e-66
Identity = 137/238 (57.56%), Postives = 166/238 (69.75%), Query Frame = 1


Query: 13  PPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKY 72
           PP  P PM IDG+  D  L+S    T  EV+ RRSRR+KQL ++YR  YWALMEELK KY
Sbjct: 6   PPPQPEPMTIDGSAVDSVLSSSSHLTHEEVVTRRSRRIKQLSKIYRTHYWALMEELKTKY 65

Query: 73  REYYWTYGKSPFKEDEKEA------EGIGDYPEGIGE-NGKLGL-GSVTGSDE---IRRC 132
           +EYYW YGKSPFKED+K+       E +G+   G+GE NGKLG  G  +  DE   +R+C
Sbjct: 66  KEYYWKYGKSPFKEDDKKRKRDDSKENLGN---GVGESNGKLGFKGDESQDDEGQGLRKC 125

Query: 133 DVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCP 192
            V GCKA  MALT++CH HIL D KQ+LYKGCTFV+KS Q  P++C KP+L STVP  CP
Sbjct: 126 AVGGCKATPMALTRFCHLHILLDSKQKLYKGCTFVVKSAQGRPVVCGKPILSSTVPALCP 185

Query: 193 GHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIE 240
            H QK E  +AR LRKAGLNVSS SK+ P FHV+V E V QIQ KRRA++K    K++
Sbjct: 186 PHFQKAETYVARALRKAGLNVSSPSKIAPKFHVIVREFVHQIQSKRRASQKENVAKVQ 240

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BLAST of CmaCh17G012430 vs. TAIR10
Match: AT2G31600.1 (AT2G31600.1 unknown protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-46
Identity = 110/246 (44.72%), Postives = 143/246 (58.13%), Query Frame = 1


Query: 6   SPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALM 65
           +P +   P     P+ +  +  D  LA     TR E+L+RRS  +KQL + YR+ YWALM
Sbjct: 49  NPSTSGLPSTSNSPITM--SQEDEILARSSHITRSELLKRRSHNLKQLAKCYRDNYWALM 108

Query: 66  EELKRKYREYYWTYGKSPFKEDEKEA--------EGI----GDYPEGIGENGKLGLGSVT 125
           E++K ++R+Y+W YG S FK++  ++        EG     GD  EG G+N     G  +
Sbjct: 109 EDVKAQHRDYWWKYGISQFKDENNQSNKRRRLGQEGDIGDGGDAVEGSGDNVTNNDGVKS 168

Query: 126 GSDEIRRCD--VTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPV 185
                  C   + GCKAKAMALTKYC  HIL D KQ+LY GCT VIK   +GPLLC KP 
Sbjct: 169 DQYANSNCGSCMYGCKAKAMALTKYCQLHILKDSKQKLYTGCTNVIKRAPAGPLLCGKPT 228

Query: 186 LRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAAR 238
           L STVP  C  H QK +K +A+ L+ AG NVSSTSK  P  HV+VA  V  IQ KR+  +
Sbjct: 229 LASTVPALCNIHFQKAQKHVAKALKDAGHNVSSTSKPPPKLHVIVAAFVHHIQAKRKNPQ 288

[Close]

BLAST of CmaCh17G012430 vs. TAIR10
Match: AT1G05860.1 (AT1G05860.1 unknown protein)

HSP 1 Score: 176.4 bits (446), Expect = 2.1e-44
Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 1


Query: 5   NSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWAL 64
           N+P +  + P       I  A  D  L +    TR E+L RRS  +KQL R YR+ YWAL
Sbjct: 41  NNPSTSSNSP-------ISMAVEDQILGNSNHLTRPELLRRRSHNLKQLSRCYRDHYWAL 100

Query: 65  MEELKRKYREYYWTYGKSPFKEDE------KEAEG-IGDYPEGIGENGKLGLGSVTGSDE 124
           ME+LK ++R Y W YG SPFK++       ++ EG  GD  EG G+N       V   + 
Sbjct: 101 MEDLKAQHRYYSWNYGVSPFKDENYHQNKRRKVEGQTGDEIEGSGDNDNNNNDGVKAGNC 160

Query: 125 IRRCDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVP 184
           +  C  +GCK+KAMALT YC  HIL DKKQ+LY  CT+V K  QS  + C KP L STVP
Sbjct: 161 VA-CG-SGCKSKAMALTNYCQLHILMDKKQKLYTSCTYVNKRAQSKAITCPKPTLASTVP 220

Query: 185 CYCPGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVK 238
             C  H QK +K +AR L+ AG NVSS S+  P  H +VA  V  IQ KR+  RK   +K
Sbjct: 221 ALCNVHFQKAQKDVARALKDAGHNVSSASRPPPKLHDIVAAFVHHIQAKRKDPRKEGKLK 271

[Close]

BLAST of CmaCh17G012430 vs. TAIR10
Match: AT3G53860.1 (AT3G53860.1 unknown protein)

HSP 1 Score: 174.9 bits (442), Expect = 6.1e-44
Identity = 101/211 (47.87%), Postives = 129/211 (61.14%), Query Frame = 1


Query: 28  DLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWTYGKSPFKED 87
           D  LAS    TR E+L RR+  +KQL + Y+  YWALME+LK ++R+Y+  YG S FK++
Sbjct: 65  DEILASSSHLTRPELLRRRADNLKQLAKCYKNHYWALMEDLKAQHRDYWCKYGVSQFKDE 124

Query: 88  EKEAEGIGDY-PEGIGENGKLGLGSVTGSDEIRRCDVTGCKAKAMALTKYCHAHILSDKK 147
           + ++       PEG G+ G  G      +     C + GCKAKAMALTKYC  HIL D K
Sbjct: 125 QNQSNKRRRLDPEGSGDKGNDGDQYANSNSGF--C-MYGCKAKAMALTKYCQLHILKDSK 184

Query: 148 QRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSSTS 207
           Q+LY GCT VI    +GPLLC KP L STVP  C  H QK +K +A+ L+ AG NVSSTS
Sbjct: 185 QKLYTGCTNVINRSPAGPLLCGKPTLASTVPVLCNVHYQKAQKNVAKALKDAGHNVSSTS 244

Query: 208 KLRPDFHVLVAECVRQIQVKRRAARKATAVK 238
           K  P  HV+VA  V  IQ +R+   K   +K
Sbjct: 245 KPPPKLHVIVAAFVHHIQAQRKNPHKEGKLK 272

[Close]

BLAST of CmaCh17G012430 vs. NCBI nr
Match: gi|659092905|ref|XP_008447279.1| (PREDICTED: INO80 complex subunit D-like isoform X1 [Cucumis melo])

HSP 1 Score: 430.3 bits (1105), Expect = 2.3e-117
Identity = 211/241 (87.55%), Postives = 224/241 (92.95%), Query Frame = 1


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MA+SNSPGSFQ PP  P P++IDGA+ D ALAS    +RREVLERRSRR KQLCR+++EL
Sbjct: 1   MADSNSPGSFQPPPVTPFPILIDGADRDRALASSMVCSRREVLERRSRRAKQLCRIFKEL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGS TGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSSTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
            GHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVL+AE VRQIQ KRRA ++ATA+KIES
Sbjct: 181 SGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLIAEYVRQIQSKRRATKRATAIKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of CmaCh17G012430 vs. NCBI nr
Match: gi|449443790|ref|XP_004139660.1| (PREDICTED: INO80 complex subunit D [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 8.7e-117
Identity = 210/241 (87.14%), Postives = 223/241 (92.53%), Query Frame = 1


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQ PP  P P++IDGA+ D ALA+    +RREVLERRSRR KQLCR+++EL
Sbjct: 1   MAESNSPGSFQPPPVTPLPILIDGADRDRALATSMICSRREVLERRSRRAKQLCRIFKEL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGL S TGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLASATGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
            GHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVL+AE VRQIQ KRRA ++ATA+KIES
Sbjct: 181 SGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLIAEYVRQIQSKRRATKRATAIKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of CmaCh17G012430 vs. NCBI nr
Match: gi|703150749|ref|XP_010109941.1| (hypothetical protein L484_011783 [Morus notabilis])

HSP 1 Score: 291.2 bits (744), Expect = 1.7e-75
Identity = 147/228 (64.47%), Postives = 173/228 (75.88%), Query Frame = 1


Query: 14  PAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYR 73
           P+P  PM IDG++ D ALA   + +RREVLERR R  KQL RVYR  YWALME++K K+R
Sbjct: 30  PSPSSPMTIDGSDRDAALAKSAWLSRREVLERRCRLAKQLARVYRHHYWALMEDVKAKHR 89

Query: 74  EYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLG--SVTGSDEIRRCDVTGCKAKAM 133
           +YYWT+GKSPFK+DE  A           ENGKLGLG  +  G D+I+RC VTGCK KAM
Sbjct: 90  DYYWTFGKSPFKDDETAAAA------ATAENGKLGLGLGNSGGGDDIKRCQVTGCKTKAM 149

Query: 134 ALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCL 193
           ALTK+CHAHIL+D +Q+LY+GC +VIKSMQSGPL C KP+LRST P  CP H QKGEKCL
Sbjct: 150 ALTKFCHAHILNDPQQKLYRGCQYVIKSMQSGPLKCCKPILRSTAPPLCPTHFQKGEKCL 209

Query: 194 ARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIE 240
            RDLRKAGLNVSS + L P FHV+VAE + QIQ KRRAARKA+  K+E
Sbjct: 210 IRDLRKAGLNVSSLTNLAPKFHVIVAEYICQIQSKRRAARKASVRKVE 251

[Close]

BLAST of CmaCh17G012430 vs. NCBI nr
Match: gi|659092907|ref|XP_008447280.1| (PREDICTED: INO80 complex subunit D-like isoform X2 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 2.9e-72
Identity = 136/158 (86.08%), Postives = 145/158 (91.77%), Query Frame = 1


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MA+SNSPGSFQ PP  P P++IDGA+ D ALAS    +RREVLERRSRR KQLCR+++EL
Sbjct: 1   MADSNSPGSFQPPPVTPFPILIDGADRDRALASSMVCSRREVLERRSRRAKQLCRIFKEL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGS TGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSSTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIK 159
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIK
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIK 158

[Close]

BLAST of CmaCh17G012430 vs. NCBI nr
Match: gi|747075310|ref|XP_011084684.1| (PREDICTED: INO80 complex subunit D-like [Sesamum indicum])

HSP 1 Score: 270.8 bits (691), Expect = 2.3e-69
Identity = 145/235 (61.70%), Postives = 169/235 (71.91%), Query Frame = 1


Query: 19  PMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWT 78
           P+ IDG+ HD AL+  EF TR EV+ RR+RRVKQL R+YR+ YWALMEELK KYREYYW 
Sbjct: 53  PIRIDGSEHDAALSKSEFLTRPEVINRRARRVKQLARIYRDHYWALMEELKLKYREYYWE 112

Query: 79  YGKSPF---KEDEKEAEGIGDYPEGIGEN---GKLGL-GSVTGSDEIRRCDVTGCKAKAM 138
           YGKSPF   +E+EK     GD      EN   G LG+ G    S+   RC V GCKAKAM
Sbjct: 113 YGKSPFLDDEENEKMNSNRGDCTGSTAENPGNGNLGINGGSVNSNVASRCGVHGCKAKAM 172

Query: 139 ALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCL 198
           ALT++CH HILSD KQ+LYK C+F IKS  +GP+LC KP+LRSTVP YCP H QK EK +
Sbjct: 173 ALTRFCHMHILSDAKQKLYKACSFSIKSSTTGPILCGKPILRSTVPSYCPLHFQKAEKHM 232

Query: 199 ARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKAT-----AVKIESN 242
            R L+KAGLNVSSTSKL P FHV++AE VRQIQ KRRAA+KA       VK E+N
Sbjct: 233 VRALKKAGLNVSSTSKLAPKFHVIIAEYVRQIQQKRRAAQKANLENAEVVKEENN 287

The following BLAST results are available for this feature:

BLAST of CmaCh17G012430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IN80D_DICDI	1.1e-07	37.68	INO80 complex subunit D OS=Dictyostelium discoideum GN=DDB_G0288447 PE=3 SV=1	[more]

BLAST of CmaCh17G012430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4I2_CUCSA	6.1e-117	87.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G337070 PE=4 SV=1	[more]
W9SSR1_9ROSA	1.2e-75	64.47	Uncharacterized protein OS=Morus notabilis GN=L484_011783 PE=4 SV=1	[more]
F6I221_VITVI	2.2e-66	60.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00060 PE=4 SV=...	[more]
F6I219_VITVI	2.9e-66	60.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00020 PE=4 SV=...	[more]
A0A067JSQ3_JATCU	3.7e-66	57.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18075 PE=4 SV=1	[more]

BLAST of CmaCh17G012430 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31600.1	1.7e-46	44.72	unknown protein	[more]
AT1G05860.1	2.1e-44	45.00	unknown protein	[more]
AT3G53860.1	6.1e-44	47.87	unknown protein	[more]

BLAST of CmaCh17G012430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092905\|ref\|XP_008447279.1\|	2.3e-117	87.55	PREDICTED: INO80 complex subunit D-like isoform X1 [Cucumis melo]	[more]
gi\|449443790\|ref\|XP_004139660.1\|	8.7e-117	87.14	PREDICTED: INO80 complex subunit D [Cucumis sativus]	[more]
gi\|703150749\|ref\|XP_010109941.1\|	1.7e-75	64.47	hypothetical protein L484_011783 [Morus notabilis]	[more]
gi\|659092907\|ref\|XP_008447280.1\|	2.9e-72	86.08	PREDICTED: INO80 complex subunit D-like isoform X2 [Cucumis melo]	[more]
gi\|747075310\|ref\|XP_011084684.1\|	2.3e-69	61.70	PREDICTED: INO80 complex subunit D-like [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025927	Potential_DNA-bd
IPR026316	NSL2

Vocabulary: **Cellular Component**
Term	Definition
GO:0000123	histone acetyltransferase complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000123	histone acetyltransferase complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G012430.1	CmaCh17G012430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025927	Potential DNA-binding domain	PFAM	PF13891	zf-C3Hc3H	coord: 122..183 score: 3.8
IPR026316	KAT8 regulatory NSL complex subunit 2	PANTHER	PTHR13453	UNCHARACTERIZED	coord: 14..239 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G012430	Cucsa.078410	Cucumber (Gy14) v1	cgycmaB0137
CmaCh17G012430	Cla014968	Watermelon (97103) v1	cmawmB331
CmaCh17G012430	Csa7G337070	Cucumber (Chinese Long) v2	cmacuB384
CmaCh17G012430	ClCG09G009140	Watermelon (Charleston Gray)	cmawcgB309
CmaCh17G012430	CSPI07G14060	Wild cucumber (PI 183967)	cmacpiB388
CmaCh17G012430	CmoCh17G012220	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G012430	Cp4.1LG12g11210	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G012430	CsaV3_7G025800	Cucumber (Chinese Long) v3	cmacucB0457
CmaCh17G012430	Cla97C09G171950	Watermelon (97103) v2	cmawmbB390
CmaCh17G012430	Bhi09G001146	Wax gourd	cmawgoB0490
CmaCh17G012430	CsGy7G012690	Cucumber (Gy14) v2	cgybcmaB920
CmaCh17G012430	Carg25542	Silver-seed gourd	carcmaB0591

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G012430	Melon (DHL92) v3.6.1	cmamedB374
CmaCh17G012430	Silver-seed gourd	carcmaB0107
CmaCh17G012430	Cucumber (Chinese Long) v3	cmacucB0462
CmaCh17G012430	Wax gourd	cmawgoB0493
CmaCh17G012430	Cucurbita maxima (Rimu)	cmacmaB378
CmaCh17G012430	Cucumber (Gy14) v1	cgycmaB0138
CmaCh17G012430	Cucurbita moschata (Rifu)	cmacmoB369
CmaCh17G012430	Melon (DHL92) v3.5.1	cmameB321
CmaCh17G012430	Cucurbita pepo (Zucchini)	cmacpeB385
CmaCh17G012430	Bottle gourd (USVL1VR-Ls)	cmalsiB346
CmaCh17G012430	Cucumber (Gy14) v2	cgybcmaB926