CSPI07G14060 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTGTTTTTTAAAAAAAAGGCATCGAGAACCGAGAAGAAGAAACCCTAAATCCTATTCCCTCCTTTCTTCCTTGGCCGCCGCCACCACACACCTATCTGTGTCCATTTGTTTTTCCCTTCACCTTCTTCTCCATATACCACCTCTCCGCTACACCCTACGCCGGCAAACTTTCTCCGTCGCAGTCGTACGCCGCCTTCTCATCGGCAAACGCCCCTTTCTTCCTTCTCTCCTTCTCTGCTGCAACCTCGTCGGCACTCACTACTGTGCAAACTTCCTCTACTCGTCTTCAAGGTGCACACTTTATCTTCCGCAATCCCTCCCTCTCTCAGCTGTTCGTTCCTGAGTTTTCTGGGATTGATCTGATTTCCTTATTCATTTTCTTTCTTCAATTAAATCAATTTCTATATAGGGTCAAAGTTAATCTAAAATCCTGCCAAATTTTTCCTATTTTAGACTGATTTTTTTTTTTCTGGGATGAGGGGGCATTCGTATATGATTGAGGAATTTTTTATGTAAGGTCGTTCTTATTTGGATTGTTCTATTCGAGAATTTTGTGTGCTGGAATGTCTCTTATATGCACTCGTTTTTCGCTGGTAGTTGAAGTTAATTTGATATAAAATTGATTGTACATGAAATGGGGGTTTGAGGAAGCTTTTGATTGATTCTTGGTGCTTCATGGTCGTTCTTGGTGCTCCTGTATTCACGAACATAACGGGATGATCAGAGCTCGGAATAATAATAATTATTATTATTTAGTATCGGTGGATTATGTAGTTATGCATTTATATATAATTGTCCTTCACCCTAGTATATGGCATGTGGAATAATCGTTTTGGATGTCAACTTCGTAGGTCATGGCAGAATCAAACTCTCCTGGTTCGTTTCAACCTCCTCCTGTTACCCCACTTCCTATTCTTATTGATGGGGCCGATCGCGATCGAGCACTTGCCACTTCTATGATTTGTTCTCGTCGAGAAGTACTCGAGCGCCGGTCCCGAAGAGCGAAACAGCTTTGTCGAATCTTCAAGGAACTGTACTGGTTTTTGTTGGAGGAACTCAAGCGCAAATACAGGGAGTATTATTGGACATATGGCAAGAGTCCGTTTAAGGAGGATGAGAAGGAAGCTGAGGGCATTGGCGATTATCCAGAGGGCATTGGGGAAAATGGAAAGCTAGGATTGGCTTCTGCGACTGGGAGCGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCGAAGGCGATGGCTTTGACAAAATATTGTCATGCTCATATCCTCTCGGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTGATCAAGAGGTTTGCATTTTGTATAACTGATAAATTCTCCTTTTGCTGCTTAGTAGTACTATTAAATATTAAATTTCTACTTGATGAGCAATAACACTAAATAGAGAATGATTATCCATTGTTGATATTATTATGATGCTTTATGATGATCTTGCTTGCTATGAACTATACTTTAGTTTTTTCATAAATTCCTCCATTTTGATTGATCAGAGCGAAAACTGTATTTCAAAAAAGTTGCTTTTATTTAATCTTCTTCGATAAAAATGTTTTAAATAAATCTTTGAAAGTGTTTGTGAAACGATTTTGAGTGATTGCTGTCAAACCCTTCAATTTTCTTTGAAATGGCTCATTTTTCAAATTTGTACTCTTAATCTTTGAATTTCTTTTACTTTTTCTTGTTTAGACTGTCTCAAGATATTATCTTGTTAGAGTTGGTCAGAGGAGACACTAAGGACAAAGGTTTTTCTAATGCTGAAGTCCTCCCAAATTGCCCTTGTAGAATATAGCACCGTAACATGAAAAGTAGGTTCCTACAAAGGAAAGAAGCTAAGTTTAGGGGTTTTATTTGTGTATTTCTTGATAACGTTTTCACAATTGAAAAATAGGTAACATGGTTGAGCAGAGATGTAGATGTCAAACCATTTTTCTGCATCGATTCGATGTTCAAAAACCTTTGATTGAGCTTTTATTTTTACTTTTAGGGCTTTTGTGTTTGAAATCTTTTCTGGAACTAAGACCAATGCACAATTGCATTTGTTATTTGAGTTGGCATAGCACTGATGTCTTAATTTTGATTAGCTCAACCTTGCACTGCAGCAAATATGATGTGTTTTCCTTTTCCATTAACTAAACTCTTACATTTACAGTATGCAGTCAGGGCCACTTCTATGTTCGAAGCCTGTTTTAAGATCAACCGTTCCCTGCTATTGTTCGGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTCGAGATTTAAGAAAAGCCGGTCTTAATGTCTCCTCAACTAGTAAGCTTCGTCCTGATTTTCATGTATTGATAGCTGAATATGTCCGACAAATACAAAGCAAAAGGAGAGCGACGAAAAGAGCAACTGCTATTAAAATTGAGAGTAACTGAGAAGGTGATGACGAGTATGGAGACGAGACGAGACCCCTCGGTTTGCAAAAGAATATGTTGCAATCCTGTTTGTGTATTCAATCCAACCCCTTTCTCTCAATGGTAGAATTTGTTGATAAAATCAATTTTTGTGTATGATCCAATCCCTTCTTCCTTTCCCTCCGTCGATAGTATTTGTTGATAAAATCAATCTTTCTCTTGTTGATTAATTCTATATGAAAGCTCAATTACATATAGAATTATTCAATTGTCATTTGATGAACATCCATCGCAGATGCAAATAATGGAGAAAAATGATACGTGTTGAATTTAAGGAATTTGAAAATCAGTGACGATGATCTTCCATCGGATGGATCGATCAAACCACAAATTTTTTCATGAACCTCGAAAAGAGACCAGTCC ATGGCAGAATCAAACTCTCCTGGTTCGTTTCAACCTCCTCCTGTTACCCCACTTCCTATTCTTATTGATGGGGCCGATCGCGATCGAGCACTTGCCACTTCTATGATTTGTTCTCGTCGAGAAGTACTCGAGCGCCGGTCCCGAAGAGCGAAACAGCTTTGTCGAATCTTCAAGGAACTGTACTGGTTTTTGTTGGAGGAACTCAAGCGCAAATACAGGGAGTATTATTGGACATATGGCAAGAGTCCGTTTAAGGAGGATGAGAAGGAAGCTGAGGGCATTGGCGATTATCCAGAGGGCATTGGGGAAAATGGAAAGCTAGGATTGGCTTCTGCGACTGGGAGCGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCGAAGGCGATGGCTTTGACAAAATATTGTCATGCTCATATCCTCTCGGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTGATCAAGAGTATGCAGTCAGGGCCACTTCTATGTTCGAAGCCTGTTTTAAGATCAACCGTTCCCTGCTATTGTTCGGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTCGAGATTTAAGAAAAGCCGGTCTTAATGTCTCCTCAACTAGTAAGCTTCGTCCTGATTTTCATGTATTGATAGCTGAATATGTCCGACAAATACAAAGCAAAAGGAGAGCGACGAAAAGAGCAACTGCTATTAAAATTGAGAGTAACTGA ATGGCAGAATCAAACTCTCCTGGTTCGTTTCAACCTCCTCCTGTTACCCCACTTCCTATTCTTATTGATGGGGCCGATCGCGATCGAGCACTTGCCACTTCTATGATTTGTTCTCGTCGAGAAGTACTCGAGCGCCGGTCCCGAAGAGCGAAACAGCTTTGTCGAATCTTCAAGGAACTGTACTGGTTTTTGTTGGAGGAACTCAAGCGCAAATACAGGGAGTATTATTGGACATATGGCAAGAGTCCGTTTAAGGAGGATGAGAAGGAAGCTGAGGGCATTGGCGATTATCCAGAGGGCATTGGGGAAAATGGAAAGCTAGGATTGGCTTCTGCGACTGGGAGCGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCGAAGGCGATGGCTTTGACAAAATATTGTCATGCTCATATCCTCTCGGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTGATCAAGAGTATGCAGTCAGGGCCACTTCTATGTTCGAAGCCTGTTTTAAGATCAACCGTTCCCTGCTATTGTTCGGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTCGAGATTTAAGAAAAGCCGGTCTTAATGTCTCCTCAACTAGTAAGCTTCGTCCTGATTTTCATGTATTGATAGCTGAATATGTCCGACAAATACAAAGCAAAAGGAGAGCGACGAAAAGAGCAACTGCTATTAAAATTGAGAGTAACTGA
BLAST of CSPI07G14060 vs. Swiss-Prot
Match: IN80D_DICDI (INO80 complex subunit D OS=Dictyostelium discoideum GN=DDB_G0288447 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07 Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 1
BLAST of CSPI07G14060 vs. TrEMBL
Match: A0A0A0K4I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G337070 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 7.2e-134 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1
BLAST of CSPI07G14060 vs. TrEMBL
Match: W9SSR1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011783 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.9e-73 Identity = 143/233 (61.37%), Postives = 174/233 (74.68%), Query Frame = 1
BLAST of CSPI07G14060 vs. TrEMBL
Match: F6I221_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00060 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.9e-63 Identity = 122/215 (56.74%), Postives = 163/215 (75.81%), Query Frame = 1
BLAST of CSPI07G14060 vs. TrEMBL
Match: A0A067JSQ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18075 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 5.1e-63 Identity = 129/239 (53.97%), Postives = 165/239 (69.04%), Query Frame = 1
BLAST of CSPI07G14060 vs. TrEMBL
Match: F6I219_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00020 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 5.1e-63 Identity = 122/215 (56.74%), Postives = 163/215 (75.81%), Query Frame = 1
BLAST of CSPI07G14060 vs. TAIR10
Match: AT2G31600.1 (AT2G31600.1 unknown protein) HSP 1 Score: 179.5 bits (454), Expect = 2.5e-45 Identity = 105/246 (42.68%), Postives = 148/246 (60.16%), Query Frame = 1
BLAST of CSPI07G14060 vs. TAIR10
Match: AT3G53860.1 (AT3G53860.1 unknown protein) HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43 Identity = 97/211 (45.97%), Postives = 132/211 (62.56%), Query Frame = 1
BLAST of CSPI07G14060 vs. TAIR10
Match: AT1G05860.1 (AT1G05860.1 unknown protein) HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42 Identity = 101/230 (43.91%), Postives = 133/230 (57.83%), Query Frame = 1
BLAST of CSPI07G14060 vs. NCBI nr
Match: gi|449443790|ref|XP_004139660.1| (PREDICTED: INO80 complex subunit D [Cucumis sativus]) HSP 1 Score: 484.6 bits (1246), Expect = 1.0e-133 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1
BLAST of CSPI07G14060 vs. NCBI nr
Match: gi|659092905|ref|XP_008447279.1| (PREDICTED: INO80 complex subunit D-like isoform X1 [Cucumis melo]) HSP 1 Score: 477.2 bits (1227), Expect = 1.6e-131 Identity = 235/241 (97.51%), Postives = 239/241 (99.17%), Query Frame = 1
BLAST of CSPI07G14060 vs. NCBI nr
Match: gi|659092907|ref|XP_008447280.1| (PREDICTED: INO80 complex subunit D-like isoform X2 [Cucumis melo]) HSP 1 Score: 313.5 bits (802), Expect = 3.1e-82 Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 1
BLAST of CSPI07G14060 vs. NCBI nr
Match: gi|703150749|ref|XP_010109941.1| (hypothetical protein L484_011783 [Morus notabilis]) HSP 1 Score: 283.9 bits (725), Expect = 2.7e-73 Identity = 143/233 (61.37%), Postives = 174/233 (74.68%), Query Frame = 1
BLAST of CSPI07G14060 vs. NCBI nr
Match: gi|747075310|ref|XP_011084684.1| (PREDICTED: INO80 complex subunit D-like [Sesamum indicum]) HSP 1 Score: 254.2 bits (648), Expect = 2.3e-64 Identity = 136/235 (57.87%), Postives = 165/235 (70.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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