CmaCh17G005560 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G005560
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCma_Chr17 : 4532994 .. 4535393 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCATGGAATTGGTGGTTTCGTTGCTATGGAATCAAGGGCAACGCCTACTCTGTCTCGATTGGCCGACCTCCTCCTCGTTGCTTCCATCACCAAAACCCTATCGGAATCAGGTACTCGAACCCTTCAACACCAATCACTTTCAATATCGGAGCCTCTCCTCCTCCAAATTCTCCGTAGCAGATCTGTTCATCCTTCGAATAAGCTCGATTTCTTCAAATGGTGCTCTCTCAGCCCTAATTTCAGCCATTCAGCCTCCACATATTCTCAAATCTTCCGTATCCTCTGTCGCTCCGGATACTTCCATGAGGTTCCCCTTTTACTCTCCTCGATGAAGCGAGACGGTGTTGATGTTGATTCTCACACTTTCAAGGTCCTTCTCGATGCGTTTATCAGGTCTGGTAAATTCGATGCTGCTCTTGAAATTTTAGACCATATGGAAGAGTTAGGAACTAGCTTGGAACTTAACACGTACAACTCTGTTCTCGTCGCTCTCGTCAGGAAAAACCAGGTGGGTTTGGCCTTGTCAATTTTCTTTAAGCTCTTTGATGCTTTTAGTACTGGAGGGCAAGAAGGTAGTGCTGTACCTAGTTTTTCCTTCTTGCCTAATGCACTTGCTTGTAATGAATTGTTGGTTGCTCTTAGGAAATCTGACATGAGGGTTGAGTTCAAAATGGTTTTTGACAAGCTTAGAACAATTAGAAGCTTTGAGTTTAATGTCTGCGGTTATAATATATGCATTCATGCTTTTGGATGTTGGGGTTATCTGGATACTTCTCTTGCCCTGTTCAAAGAAATGAAGCAAAGGAGCTTAGTTTCGGTGTCTTTTGGTCCAGATTTGTGTACATATAATAGCCTTATTCATGTGCTCTGTTTGGTAGGGAAGGTAAACGATGCACTTATTGTGTGGGAGGAACTTAAAGGGTCAGGTCATGAGCCTGATGCCTTCACATACCGTCTTATAATTCAGGGTTGCTGTAAATCTTACCGAATGGACGATGCTACCGCGATTTTTAATGAAATGGAGTACAATGGATTTGTCCCAAATACCATTGTATATAATTCTCTCCTTGATGGGTTATTTAAGGCTCGGAGAGTTGTTGAAGCATGTCAATTTTTTGATAAAATGGTGCAAGACGGTGTTAGAGCTTCTCCTTGGACATACAATATTCTAATTGATGGATTATTTAGGAATGGAAGAGCTGAAGCTAGCTACTCTTTATTCTGTGATTTGAAGAAAAAGGGTCAATTTGTTGATGGTGTTACTTACAGCATCATTATACTGCAACTGTGTAAAGAGGGACTGCTTGAGGAAGCACTACAATTGGTTGAAGAAATGGAAGCGAGAGGCTTTGTTATTGATCTTGTTACTGTAACATCTTTGTTGATTGCAATGTACAAGCAAGGCCAGTGGGAAGGGTTAGAGAGGCTCATGAAGCACATTAGAGAAGGTGATTTGGTCCCCAATGTGCTGAAATGGAAGGCCAATATGGAAGATTCAGTGAAGTATCAGAAAAATAAAAGGAAAGACTACTCGCCTCTGTTTTCTCCAAAGGAGGATCTGAGTGAGATTATAAGTTCAAGAGCTGCTTCTGTTGCTAAAGTTAATGTTGATGATATTTCCGAAAACACAGAAGAAAAAGATGATGACAATTGGTCATCATCCCCACATGTAGATCTCTTGGCTAATCGTGCTAAGTCTACAGGTGATTCATTGCAACTGTTCTCTCTTAGTCCTGGGCAACGAGTTCAATCAAAAGGGAACAACTCATTCGATATCGATATGGTCAATACATTTTTGTCTATTTTTCTAGCAAAGGGAAAATTGAGCTTAGCTTGTAAATTGTTTGACATCTTCAGTGATATGGGTGTGAACCCAGTGAGGTACACTTACAATTCAATGCTGAGTGCATTTGTGAAGAAGGGATACTTTCACCAGGCATGGGGTATATTTAACGAAATGGGCGAGAAGGTATGTCCAGCTGATATAGCCACGTATAATTTGATAATTCAAGGACTCGGGAAGATGGGTAGAGCAGATCTTGCAAGTTCGGTTCTGGAAAAGCTAATGGAGCAGGGTGGCTATCTCGATATCGTAATGTACAACACGTTGATGAATGCGCTGGGGAAGGCAGGTCGAATGGATGATGTAAATAAGCTTTTTGAGCAAATGAGGAGCAGTGGGATATACCCAGATGTTGTCAGTTTTAATACACTTATTGAAGTTCACAGCAAAGCAGGTCGGTTTAAGGACGCTTACAAATATTTGAAGATGATGCTGGATTCGGGCTGTTCCCCGAACCATGTCACGGATACAATTTTGGATTTTCTAGGGAGAGAGATTGAGAAAGCGAGGTATGAAAAAGCTTCAATCATGCGTGACAAGAACAGTTCTTGA

mRNA sequence

ATGCGCCATGGAATTGGTGGTTTCGTTGCTATGGAATCAAGGGCAACGCCTACTCTGTCTCGATTGGCCGACCTCCTCCTCGTTGCTTCCATCACCAAAACCCTATCGGAATCAGGTACTCGAACCCTTCAACACCAATCACTTTCAATATCGGAGCCTCTCCTCCTCCAAATTCTCCGTAGCAGATCTGTTCATCCTTCGAATAAGCTCGATTTCTTCAAATGGTGCTCTCTCAGCCCTAATTTCAGCCATTCAGCCTCCACATATTCTCAAATCTTCCGTATCCTCTGTCGCTCCGGATACTTCCATGAGGTTCCCCTTTTACTCTCCTCGATGAAGCGAGACGGTGTTGATGTTGATTCTCACACTTTCAAGGTCCTTCTCGATGCGTTTATCAGGTCTGGTAAATTCGATGCTGCTCTTGAAATTTTAGACCATATGGAAGAGTTAGGAACTAGCTTGGAACTTAACACGTACAACTCTGTTCTCGTCGCTCTCGTCAGGAAAAACCAGGTGGGTTTGGCCTTGTCAATTTTCTTTAAGCTCTTTGATGCTTTTAGTACTGGAGGGCAAGAAGGTAGTGCTGTACCTAGTTTTTCCTTCTTGCCTAATGCACTTGCTTGTAATGAATTGTTGGTTGCTCTTAGGAAATCTGACATGAGGGTTGAGTTCAAAATGGTTTTTGACAAGCTTAGAACAATTAGAAGCTTTGAGTTTAATGTCTGCGGTTATAATATATGCATTCATGCTTTTGGATGTTGGGGTTATCTGGATACTTCTCTTGCCCTGTTCAAAGAAATGAAGCAAAGGAGCTTAGTTTCGGTGTCTTTTGGTCCAGATTTGTGTACATATAATAGCCTTATTCATGTGCTCTGTTTGGTAGGGAAGGTAAACGATGCACTTATTGTGTGGGAGGAACTTAAAGGGTCAGGTCATGAGCCTGATGCCTTCACATACCGTCTTATAATTCAGGGTTGCTGTAAATCTTACCGAATGGACGATGCTACCGCGATTTTTAATGAAATGGAGTACAATGGATTTGTCCCAAATACCATTGTATATAATTCTCTCCTTGATGGGTTATTTAAGGCTCGGAGAGTTGTTGAAGCATGTCAATTTTTTGATAAAATGGTGCAAGACGGTGTTAGAGCTTCTCCTTGGACATACAATATTCTAATTGATGGATTATTTAGGAATGGAAGAGCTGAAGCTAGCTACTCTTTATTCTGTGATTTGAAGAAAAAGGGTCAATTTGTTGATGGTGTTACTTACAGCATCATTATACTGCAACTGTGTAAAGAGGGACTGCTTGAGGAAGCACTACAATTGGTTGAAGAAATGGAAGCGAGAGGCTTTGTTATTGATCTTGTTACTGTAACATCTTTGTTGATTGCAATGTACAAGCAAGGCCAGTGGGAAGGGTTAGAGAGGCTCATGAAGCACATTAGAGAAGGTGATTTGGTCCCCAATGTGCTGAAATGGAAGGCCAATATGGAAGATTCAGTGAAGTATCAGAAAAATAAAAGGAAAGACTACTCGCCTCTGTTTTCTCCAAAGGAGGATCTGAGTGAGATTATAAGTTCAAGAGCTGCTTCTGTTGCTAAAGTTAATGTTGATGATATTTCCGAAAACACAGAAGAAAAAGATGATGACAATTGGTCATCATCCCCACATGTAGATCTCTTGGCTAATCGTGCTAAGTCTACAGGTGATTCATTGCAACTGTTCTCTCTTAGTCCTGGGCAACGAGTTCAATCAAAAGGGAACAACTCATTCGATATCGATATGGTCAATACATTTTTGTCTATTTTTCTAGCAAAGGGAAAATTGAGCTTAGCTTGTAAATTGTTTGACATCTTCAGTGATATGGGTGTGAACCCAGTGAGGTACACTTACAATTCAATGCTGAGTGCATTTGTGAAGAAGGGATACTTTCACCAGGCATGGGGTATATTTAACGAAATGGGCGAGAAGGTATGTCCAGCTGATATAGCCACGTATAATTTGATAATTCAAGGACTCGGGAAGATGGGTAGAGCAGATCTTGCAAGTTCGGTTCTGGAAAAGCTAATGGAGCAGGGTGGCTATCTCGATATCGTAATGTACAACACGTTGATGAATGCGCTGGGGAAGGCAGGTCGAATGGATGATGTAAATAAGCTTTTTGAGCAAATGAGGAGCAGTGGGATATACCCAGATGTTGTCAGTTTTAATACACTTATTGAAGTTCACAGCAAAGCAGGTCGGTTTAAGGACGCTTACAAATATTTGAAGATGATGCTGGATTCGGGCTGTTCCCCGAACCATGTCACGGATACAATTTTGGATTTTCTAGGGAGAGAGATTGAGAAAGCGAGGTATGAAAAAGCTTCAATCATGCGTGACAAGAACAGTTCTTGA

Coding sequence (CDS)

ATGCGCCATGGAATTGGTGGTTTCGTTGCTATGGAATCAAGGGCAACGCCTACTCTGTCTCGATTGGCCGACCTCCTCCTCGTTGCTTCCATCACCAAAACCCTATCGGAATCAGGTACTCGAACCCTTCAACACCAATCACTTTCAATATCGGAGCCTCTCCTCCTCCAAATTCTCCGTAGCAGATCTGTTCATCCTTCGAATAAGCTCGATTTCTTCAAATGGTGCTCTCTCAGCCCTAATTTCAGCCATTCAGCCTCCACATATTCTCAAATCTTCCGTATCCTCTGTCGCTCCGGATACTTCCATGAGGTTCCCCTTTTACTCTCCTCGATGAAGCGAGACGGTGTTGATGTTGATTCTCACACTTTCAAGGTCCTTCTCGATGCGTTTATCAGGTCTGGTAAATTCGATGCTGCTCTTGAAATTTTAGACCATATGGAAGAGTTAGGAACTAGCTTGGAACTTAACACGTACAACTCTGTTCTCGTCGCTCTCGTCAGGAAAAACCAGGTGGGTTTGGCCTTGTCAATTTTCTTTAAGCTCTTTGATGCTTTTAGTACTGGAGGGCAAGAAGGTAGTGCTGTACCTAGTTTTTCCTTCTTGCCTAATGCACTTGCTTGTAATGAATTGTTGGTTGCTCTTAGGAAATCTGACATGAGGGTTGAGTTCAAAATGGTTTTTGACAAGCTTAGAACAATTAGAAGCTTTGAGTTTAATGTCTGCGGTTATAATATATGCATTCATGCTTTTGGATGTTGGGGTTATCTGGATACTTCTCTTGCCCTGTTCAAAGAAATGAAGCAAAGGAGCTTAGTTTCGGTGTCTTTTGGTCCAGATTTGTGTACATATAATAGCCTTATTCATGTGCTCTGTTTGGTAGGGAAGGTAAACGATGCACTTATTGTGTGGGAGGAACTTAAAGGGTCAGGTCATGAGCCTGATGCCTTCACATACCGTCTTATAATTCAGGGTTGCTGTAAATCTTACCGAATGGACGATGCTACCGCGATTTTTAATGAAATGGAGTACAATGGATTTGTCCCAAATACCATTGTATATAATTCTCTCCTTGATGGGTTATTTAAGGCTCGGAGAGTTGTTGAAGCATGTCAATTTTTTGATAAAATGGTGCAAGACGGTGTTAGAGCTTCTCCTTGGACATACAATATTCTAATTGATGGATTATTTAGGAATGGAAGAGCTGAAGCTAGCTACTCTTTATTCTGTGATTTGAAGAAAAAGGGTCAATTTGTTGATGGTGTTACTTACAGCATCATTATACTGCAACTGTGTAAAGAGGGACTGCTTGAGGAAGCACTACAATTGGTTGAAGAAATGGAAGCGAGAGGCTTTGTTATTGATCTTGTTACTGTAACATCTTTGTTGATTGCAATGTACAAGCAAGGCCAGTGGGAAGGGTTAGAGAGGCTCATGAAGCACATTAGAGAAGGTGATTTGGTCCCCAATGTGCTGAAATGGAAGGCCAATATGGAAGATTCAGTGAAGTATCAGAAAAATAAAAGGAAAGACTACTCGCCTCTGTTTTCTCCAAAGGAGGATCTGAGTGAGATTATAAGTTCAAGAGCTGCTTCTGTTGCTAAAGTTAATGTTGATGATATTTCCGAAAACACAGAAGAAAAAGATGATGACAATTGGTCATCATCCCCACATGTAGATCTCTTGGCTAATCGTGCTAAGTCTACAGGTGATTCATTGCAACTGTTCTCTCTTAGTCCTGGGCAACGAGTTCAATCAAAAGGGAACAACTCATTCGATATCGATATGGTCAATACATTTTTGTCTATTTTTCTAGCAAAGGGAAAATTGAGCTTAGCTTGTAAATTGTTTGACATCTTCAGTGATATGGGTGTGAACCCAGTGAGGTACACTTACAATTCAATGCTGAGTGCATTTGTGAAGAAGGGATACTTTCACCAGGCATGGGGTATATTTAACGAAATGGGCGAGAAGGTATGTCCAGCTGATATAGCCACGTATAATTTGATAATTCAAGGACTCGGGAAGATGGGTAGAGCAGATCTTGCAAGTTCGGTTCTGGAAAAGCTAATGGAGCAGGGTGGCTATCTCGATATCGTAATGTACAACACGTTGATGAATGCGCTGGGGAAGGCAGGTCGAATGGATGATGTAAATAAGCTTTTTGAGCAAATGAGGAGCAGTGGGATATACCCAGATGTTGTCAGTTTTAATACACTTATTGAAGTTCACAGCAAAGCAGGTCGGTTTAAGGACGCTTACAAATATTTGAAGATGATGCTGGATTCGGGCTGTTCCCCGAACCATGTCACGGATACAATTTTGGATTTTCTAGGGAGAGAGATTGAGAAAGCGAGGTATGAAAAAGCTTCAATCATGCGTGACAAGAACAGTTCTTGA

Protein sequence

MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFLGREIEKARYEKASIMRDKNSS
Homology
[Close]
BLAST of CmaCh17G005560 vs. Swiss-Prot
Match: PP299_ARATH (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1)

HSP 1 Score: 984.9 bits (2545), Expect = 5.0e-286
Identity = 496/805 (61.61%), Postives = 631/805 (78.39%), Query Frame = 1 

Query: 1   MRHGIGGFVA-----MESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLL 60
           MRHG G  V+     +         +L ++LLVAS++KTLS+SGTR+L   S+ ISEP++
Sbjct: 1   MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60

Query: 61  LQILRSRSVHPSNKLDFFKWC-SLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKR 120
           LQILR  S+ PS KLDFF+WC SL P + HSA+ YSQIFR +CR+G   EVP LL SMK 
Sbjct: 61  LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120

Query: 121 DGVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGL 180
           DGV++D    K+LLD+ IRSGKF++AL +LD+MEELG  L  + Y+SVL+ALV+K+++ L
Sbjct: 121 DGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL 180

Query: 181 ALSIFFKLFDAFSTGGQEGSA-VPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRT 240
           ALSI FKL +A      + +  V   S+LP  +A NELLV LR++DMR EFK VF+KL+ 
Sbjct: 181 ALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG 240

Query: 241 IRSFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLV-SVSFGPDLCTYNSLIHVLC 300
           ++ F+F+   YNICIH FGCWG LD +L+LFKEMK+RS V   SFGPD+CTYNSLIHVLC
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300

Query: 301 LVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTI 360
           L GK  DALIVW+ELK SGHEPD  TYR++IQGCCKSYRMDDA  I+ EM+YNGFVP+TI
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360

Query: 361 VYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDL 420
           VYN LLDG  KAR+V EACQ F+KMVQ+GVRAS WTYNILIDGLFRNGRAEA ++LFCDL
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420

Query: 421 KKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQW 480
           KKKGQFVD +T+SI+ LQLC+EG LE A++LVEEME RGF +DLVT++SLLI  +KQG+W
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480

Query: 481 EGLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAAS 540
           +  E+LMKHIREG+LVPNVL+W A +E S+K  ++K KDY+P+F  K    +I+S   + 
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSE 540

Query: 541 VAKVNVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSF 600
               + +++S      +DD WSSSP++D LA++         LF L+ GQRV++K  +SF
Sbjct: 541 DDGASAEEVS----PMEDDPWSSSPYMDQLAHQ---RNQPKPLFGLARGQRVEAK-PDSF 600

Query: 601 DIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVNPV-RYTYNSMLSAFVKKGYFHQAWGI 660
           D+DM+NTFLSI+L+KG LSLACKLF+IF+ MGV  +  YTYNSM+S+FVKKGYF  A G+
Sbjct: 601 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 660

Query: 661 FNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGK 720
            ++M E  C ADIATYN+IIQGLGKMGRADLAS+VL++L +QGGYLDIVMYNTL+NALGK
Sbjct: 661 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 720

Query: 721 AGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT 780
           A R+D+  +LF+ M+S+GI PDVVS+NT+IEV+SKAG+ K+AYKYLK MLD+GC PNHVT
Sbjct: 721 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 780

Query: 781 DTILDFLGREIEKARYEKASIMRDK 797
           DTILD+LG+E+EKAR++KAS +R+K
Sbjct: 781 DTILDYLGKEMEKARFKKASFVRNK 797

[Close]
BLAST of CmaCh17G005560 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.0e-53
Identity = 170/749 (22.70%), Postives = 333/749 (44.46%), Query Frame = 1 

Query: 38  SGTRTLQHQSLSISEPLLLQILRSRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILC 97
           S   TL   S       ++ +LR R    +  +++F+W        H   +Y+ +  ++ 
Sbjct: 51  SAENTLSALSFKPQPEFVIGVLR-RLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMA 110

Query: 98  RSGYFHEVPLLLSSMKRDGVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELN 157
           R   F  +  +L  M   G     +T   ++   +++ K     +++  M +       +
Sbjct: 111 RCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFS 170

Query: 158 TYNSVLVALVRKNQVGLALSIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRK 217
            Y +++ A    N   + L++F ++ +                + P       L+    K
Sbjct: 171 AYTTLIGAFSAVNHSDMMLTLFQQMQE--------------LGYEPTVHLFTTLIRGFAK 230

Query: 218 SDMRVEFKMVFDKLRTIRSFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSF 277
                    + D++++  S + ++  YN+CI +FG  G +D +   F E++   L     
Sbjct: 231 EGRVDSALSLLDEMKS-SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK---- 290

Query: 278 GPDLCTYNSLIHVLCLVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATA 337
            PD  TY S+I VLC   ++++A+ ++E L+ +   P  + Y  +I G   + + D+A +
Sbjct: 291 -PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 350

Query: 338 IFNEMEYNGFVPNTIVYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLF 397
           +       G +P+ I YN +L  L K  +V EA + F++M +D    +  TYNILID L 
Sbjct: 351 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLC 410

Query: 398 RNGRAEASYSLFCDLKKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLV 457
           R G+ + ++ L   ++K G F +  T +I++ +LCK   L+EA  + EEM+ +    D +
Sbjct: 411 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 470

Query: 458 TVTSLLIAMYKQGQWEGLERLMKHIREGDLVPNVLKWKANMEDSVKY--QKNKRKDYSPL 517
           T  SL+  + K G+ +   ++ + + + D   N + + + +++   +  +++  K Y  +
Sbjct: 471 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 530

Query: 518 F----SPKEDLSE-----IISSRAASVAKVNVDDISENTEEKDDDNWSSSPHVDLLANRA 577
                SP   L       +  +      +   ++I       D  ++S   H  + A  A
Sbjct: 531 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 590

Query: 578 KSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVN 637
             T    +LF     Q          D    N  +  F   GK++ A +L +     G  
Sbjct: 591 NET---YELFYSMKEQ------GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 650

Query: 638 PVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPADIATYNLIIQGLGKMGRADLASSV 697
           P   TY S++    K     +A+ +F E   K    ++  Y+ +I G GK+GR D A  +
Sbjct: 651 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 710

Query: 698 LEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSK 757
           LE+LM++G   ++  +N+L++AL KA  +++    F+ M+     P+ V++  LI    K
Sbjct: 711 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 768

Query: 758 AGRFKDAYKYLKMMLDSGCSPNHVTDTIL 776
             +F  A+ + + M   G  P+ ++ T +
Sbjct: 771 VRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

[Close]
BLAST of CmaCh17G005560 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-50
Identity = 179/669 (26.76%), Postives = 290/669 (43.35%), Query Frame = 1 

Query: 110 SSMKRDGVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRK 169
           S M++DG   D  TF +L+DA  ++G F  A + LD M + G    L+TYN+++  L+R 
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411

Query: 170 NQVGLALSIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFD 229
           +++  AL +F         G  E   V      P A      +    KS   V     F+
Sbjct: 412 HRLDDALELF---------GNMESLGVK-----PTAYTYIVFIDYYGKSGDSVSALETFE 471

Query: 230 KLRTIRSFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIH 289
           K++T +    N+   N  +++    G    +  +F  +K   LV     PD  TYN ++ 
Sbjct: 472 KMKT-KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV-----PDSVTYNMMMK 531

Query: 290 VLCLVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVP 349
               VG++++A+ +  E+  +G EPD      +I    K+ R+D+A  +F  M+     P
Sbjct: 532 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 591

Query: 350 NTIVYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLF 409
             + YN+LL GL K  ++ EA + F+ MVQ G   +  T+N L D L +N     +  + 
Sbjct: 592 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 651

Query: 410 CDLKKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQ 469
             +   G   D  TY+ II  L K G ++EA+    +M+   +  D VT+ +L       
Sbjct: 652 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTL------- 711

Query: 470 GQWEGLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSE-IISS 529
                             +P V+K  + +ED+ K   N    Y+    P     E +I S
Sbjct: 712 ------------------LPGVVK-ASLIEDAYKIITNFL--YNCADQPANLFWEDLIGS 771

Query: 530 RAASVAKVNVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKG 589
             A     N    SE                 L+AN     GDS+    L P  R   K 
Sbjct: 772 ILAEAGIDNAVSFSER----------------LVANGICRDGDSI----LVPIIRYSCKH 831

Query: 590 NNSFDIDMVNTFLSIFLAKGKLSLACKLFDIFS-DMGVNPVRYTYNSMLSAFVKKGYFHQ 649
           NN                   +S A  LF+ F+ D+GV P   TYN ++   ++      
Sbjct: 832 NN-------------------VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 891

Query: 650 AWGIFNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMN 709
           A  +F ++    C  D+ATYN ++   GK G+ D    + +++       + + +N +++
Sbjct: 892 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 932

Query: 710 ALGKAGRMDDVNKLFEQMRSSGIY-PDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCS 769
            L KAG +DD   L+  + S   + P   ++  LI+  SK+GR  +A +  + MLD GC 
Sbjct: 952 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 932

Query: 770 PNHVTDTIL 776
           PN     IL
Sbjct: 1012 PNCAIYNIL 932

[Close]
BLAST of CmaCh17G005560 vs. Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-48
Identity = 144/560 (25.71%), Postives = 265/560 (47.32%), Query Frame = 1 

Query: 240 NVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVND 299
           ++  +N  + A       D  ++L ++M++  +V       L TYN LI+  C   +++ 
Sbjct: 84  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-----GLYTYNILINCFCRRSQISL 143

Query: 300 ALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLD 359
           AL +  ++   G+EP   T   ++ G C   R+ DA A+ ++M   G+ P+TI + +L+ 
Sbjct: 144 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 203

Query: 360 GLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFV 419
           GLF   +  EA    D+MVQ G + +  TY ++++GL + G  + + +L   ++      
Sbjct: 204 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 263

Query: 420 DGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLM 479
           D V ++ II  LCK   +++AL L +EME +G   ++VT +SL+  +   G+W    +L+
Sbjct: 264 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 323

Query: 480 KHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVD 539
             + E  + PN++ + A ++  VK  K         F   E L                D
Sbjct: 324 SDMIEKKINPNLVTFNALIDAFVKEGK---------FVEAEKL---------------YD 383

Query: 540 DISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNT 599
           D+ + + + D   ++S  +   + +R      + Q+F     +          D+   NT
Sbjct: 384 DMIKRSIDPDIFTYNSLVNGFCMHDRLDK---AKQMFEFMVSKDCFP------DVVTYNT 443

Query: 600 FLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKV 659
            +  F    ++    +LF   S  G+     TY +++      G    A  +F +M    
Sbjct: 444 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 503

Query: 660 CPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVN 719
            P DI TY++++ GL   G+ + A  V + + +    LDI +Y T++  + KAG++DD  
Sbjct: 504 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 563

Query: 720 KLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT-DTILDFL 779
            LF  +   G+ P+VV++NT+I         ++AY  LK M + G  PN  T +T++   
Sbjct: 564 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 603

Query: 780 GREIEKARYEKASIMRDKNS 799
            R+ +KA    A ++R+  S
Sbjct: 624 LRDGDKA--ASAELIREMRS 603

[Close]
BLAST of CmaCh17G005560 vs. Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.4e-46
Identity = 142/530 (26.79%), Postives = 248/530 (46.79%), Query Frame = 1 

Query: 280 DLCTYNSLIHVLCLVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIF 339
           D+ T   +I+  C   K+  A  V       G+EPD  T+  ++ G C   R+ +A A+ 
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163

Query: 340 NEMEYNGFVPNTIVYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRN 399
           + M      P+ +  ++L++GL    RV EA    D+MV+ G +    TY  +++ L ++
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223

Query: 400 GRAEASYSLFCDLKKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTV 459
           G +  +  LF  ++++      V YSI+I  LCK+G  ++AL L  EME +G   D+VT 
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283

Query: 460 TSLLIAMYKQGQWEGLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPK 519
           +SL+  +   G+W+   ++++ +   +++P+V+ + A ++  VK  K        L   K
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK--------LLEAK 343

Query: 520 EDLSEIISSRAASVAKVNVDDISENTEE----KDDDNWSSSPHVDLLAN----------- 579
           E  +E+I+   A       D I+ N+      K++    ++   DL+ +           
Sbjct: 344 ELYNEMITRGIAP------DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 403

Query: 580 -------RAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSIFLAKGKLSLACKLF 639
                  +AK   D ++LF     + + SKG     I   NT +  F   GKL+ A +LF
Sbjct: 404 ILINSYCKAKRVDDGMRLF-----REISSKGLIPNTI-TYNTLVLGFCQSGKLNAAKELF 463

Query: 640 DIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPADIATYNLIIQGLGKM 699
                 GV P   TY  +L      G  ++A  IF +M +      I  YN+II G+   
Sbjct: 464 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 523

Query: 700 GRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFEQMRSSGIYPDVVSF 759
            + D A S+   L ++G   D+V YN ++  L K G + + + LF +M+  G  PD  ++
Sbjct: 524 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 583

Query: 760 NTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT-DTILDFLG-REIEKA 786
           N LI  H        + + ++ M   G S +  T   ++D L  R ++K+
Sbjct: 584 NILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613

[Close]
BLAST of CmaCh17G005560 vs. TrEMBL
Match: A0A0A0KFG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G101450 PE=4 SV=1)

HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 672/803 (83.69%), Postives = 733/803 (91.28%), Query Frame = 1 

Query: 1   MRHGIGG--FVAMES--RATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLL 60
           MRHG     F+++ES  R   TLS L+ LLL+ASITKTLSESGTRTLQH SL IS PLLL
Sbjct: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60

Query: 61  QILRSRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDG 120
           QIL SRS++PS+KLDFFKWCSL+PNF+HS STYSQIF ILCRSGY HEVP LL SMKRDG
Sbjct: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120

Query: 121 VDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLAL 180
           V VDSHTFKVLLDAFIRSGK+DAALEILDHME+LGTSLELNTYNSVLVAL+RKNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180

Query: 181 SIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRS 240
           SIFFKL D F+ GGQ  SA  +F FLPN+LACNELLVALRK DMRVEFK VFDKLR I S
Sbjct: 181 SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES 240

Query: 241 FEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGK 300
           FEF+V GYNICI+AFGCWGYLDT+L+LFKEMK++SLVS SF PDLCTYNS+IHVLCLVGK
Sbjct: 241 FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 300

Query: 301 VNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNS 360
           V DALIVWEELKGSGHEPDAFTYR+IIQGCCKS RMDDAT IFNEMEYNG +P+TIVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 360

Query: 361 LLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKG 420
           LL+GLFKAR+V EACQ FDKMVQ+ VRASPWTYNILIDGLFRNGRAEA Y+LFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420

Query: 421 QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLE 480
           Q VD VTYSIIILQLCKE LLEEALQLVEEMEARGFV+DL+T+TSLLIAM+KQGQW+GLE
Sbjct: 421 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 480

Query: 481 RLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKV 540
           RLMKHIREGDLVPNVLKWK NME S+KYQKNKRKD+S LFSPKEDLSE+ISSRA+S AKV
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV 540

Query: 541 NVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDM 600
           N+D+  ENTEE+D D+WSSSP+V+ LAN A ST D LQ FS+  G+R+Q K +NSFDI+M
Sbjct: 541 NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM 600

Query: 601 VNTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMG 660
           VNTFLSIFLAKGKL+LACKLF+IFSDMGVNPV+YTYNSMLS+FVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660

Query: 661 EKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMD 720
           E VCPADIATYN+IIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTL+NALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720

Query: 721 DVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILD 780
           DVNKLF QMR+SGI PDVV+FNTLIEVHSKAGR KDAYK+LKMMLDSGCSPNHVTDT LD
Sbjct: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780

Query: 781 FLGREIEKARYEKASIMRDKNSS 800
           FLGRE+EKARYEKASI+RDKNSS
Sbjct: 781 FLGREMEKARYEKASIIRDKNSS 803

[Close]
BLAST of CmaCh17G005560 vs. TrEMBL
Match: A0A061DRT6_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_005001 PE=4 SV=1)

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 568/806 (70.47%), Postives = 668/806 (82.88%), Query Frame = 1 

Query: 1   MRHGIGGFVAMESRATPTLS-RLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQIL 60
           MR+G  G  ++ S    + S  L ++LL+AS+TKTLSESGTR L   S+ ISEPL++QIL
Sbjct: 1   MRNGRTGLSSVSSPLLKSPSIHLGNILLIASLTKTLSESGTRNLDPNSIPISEPLVIQIL 60

Query: 61  RSRSVHPSNKLDFFKWC-SLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVD 120
           R  S+ PS KLDFF WC S+ PNF HSA TYS IFR LCRSG+  EVP LL +MK DGV 
Sbjct: 61  RKHSLEPSKKLDFFNWCRSVKPNFKHSAVTYSHIFRTLCRSGFVEEVPNLLFAMKEDGVL 120

Query: 121 VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSI 180
           VDS TFK LLDAFIRSGKFD+ALEILD MEELG  L L  Y+SVLVAL+RK+QVGLALS+
Sbjct: 121 VDSDTFKFLLDAFIRSGKFDSALEILDFMEELGAGLNLRVYDSVLVALIRKDQVGLALSL 180

Query: 181 FFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFE 240
           FFKL +A + G  +G++V S   LP ++A NELLVALRK+ MR EFK VFD LR  R FE
Sbjct: 181 FFKLLEACN-GNDDGNSVDSS--LPGSIAINELLVALRKAHMRREFKQVFDILREKREFE 240

Query: 241 FNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVN 300
           F+ CGYNICIH+FGCWG L  SL LFKEMK++     SFGPDLCTYNSLI VLCLVGKV 
Sbjct: 241 FDTCGYNICIHSFGCWGDLGASLKLFKEMKEKEKSFGSFGPDLCTYNSLIDVLCLVGKVK 300

Query: 301 DALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLL 360
           DAL+VWEELK SGHEPDAFTYR++IQGC KSYRMDDAT IF+EM+YNGF  +T+VYNSLL
Sbjct: 301 DALVVWEELKVSGHEPDAFTYRILIQGCSKSYRMDDATKIFSEMQYNGFAMDTVVYNSLL 360

Query: 361 DGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQF 420
           +GLFKAR+V+EACQFF+KMVQDGVRAS WTYNILIDGLFRNGRAEA+Y+LFCDLKKKGQF
Sbjct: 361 NGLFKARKVMEACQFFEKMVQDGVRASCWTYNILIDGLFRNGRAEAAYTLFCDLKKKGQF 420

Query: 421 VDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERL 480
           VDG+TYSI++LQLC+EG LE AL+LVEEMEARGF++DLVT+TSLLI  +KQG+W+  ERL
Sbjct: 421 VDGITYSIVVLQLCREGQLEGALRLVEEMEARGFIVDLVTITSLLIGFHKQGRWDWTERL 480

Query: 481 MKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEII----SSRAASVA 540
           MKHIR+G+LVPNVLKWKANME S+K     RKDY+PLF  K D  EI+    S   A   
Sbjct: 481 MKHIRDGNLVPNVLKWKANMEASMKNPPKNRKDYTPLFPSKGDFREIMNLLGSVGQAMGT 540

Query: 541 KVNVDDISENTEEK---DDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNS 600
            ++ +D  E  +EK   D D WSSSP++D LAN+ KST  S QLFSL  GQRVQ KG  S
Sbjct: 541 NLDSEDCDEKDQEKPSIDTDQWSSSPYMDQLANQGKSTERSSQLFSLIRGQRVQEKGIGS 600

Query: 601 FDIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGI 660
           FD+DMVNTFLSIFLAKGKLSLACKLF++F+DMGV+PV YTYNS++S+FVKKGYF++AWG+
Sbjct: 601 FDVDMVNTFLSIFLAKGKLSLACKLFEVFTDMGVDPVSYTYNSIMSSFVKKGYFNEAWGV 660

Query: 661 FNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGK 720
            NEM EKVCPADIATYNLIIQGLGKMGRAD+ASSVL+KLM+QGGYLD+VMYNTL+NALGK
Sbjct: 661 LNEMDEKVCPADIATYNLIIQGLGKMGRADIASSVLDKLMKQGGYLDVVMYNTLVNALGK 720

Query: 721 AGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT 780
           AGR+D+ +KLFEQMR+SGI PDV+++NTLIEVH+KAG+ +DAYK+LKMMLD+GCSPNHVT
Sbjct: 721 AGRVDEASKLFEQMRTSGINPDVITYNTLIEVHTKAGQLQDAYKFLKMMLDAGCSPNHVT 780

Query: 781 DTILDFLGREIEKARYEKASIMRDKN 798
           DTILD LG+EIEK R +KAS++R  N
Sbjct: 781 DTILDNLGKEIEKMRLQKASMVRTDN 803

[Close]
BLAST of CmaCh17G005560 vs. TrEMBL
Match: A0A0D2QQS9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G149600 PE=4 SV=1)

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 553/813 (68.02%), Postives = 659/813 (81.06%), Query Frame = 1 

Query: 1   MRHGIGGFVAMESRATPTLS----RLADLLLVASITKTLSESGTRTLQHQSLSISEPLLL 60
           MRHG      + S ++P L     +L ++LL+AS+TKTL ESGTR L   S+ +SEPL+L
Sbjct: 1   MRHGR---TPISSFSSPLLKNPSIQLGNILLIASLTKTLLESGTRNLDPNSIPLSEPLVL 60

Query: 61  QILRSRSVHPSNKLDFFKWC-SLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRD 120
           QILR  S+ PS KLDFF WC S  PNF HSA TYS IFR LCRSG+  EVP LL  MK D
Sbjct: 61  QILRKNSLEPSKKLDFFNWCRSFKPNFKHSAVTYSHIFRTLCRSGFVEEVPNLLFLMKED 120

Query: 121 GVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLA 180
           GV VDS TFK+LLDAFIRSGKFD ALEILD+MEE G  L  + Y+SVLVAL RK QVGLA
Sbjct: 121 GVLVDSSTFKLLLDAFIRSGKFDTALEILDYMEESGACLNASVYDSVLVALARKGQVGLA 180

Query: 181 LSIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIR 240
           LS+F KL +A + G   G++V   S LP ++A NELLVAL+K+DMR EFK +FDKLR  +
Sbjct: 181 LSMFCKLLEACN-GNDNGNSV--VSSLPGSVAINELLVALKKADMRAEFKQIFDKLREKK 240

Query: 241 SFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQR--SLVSVSFGPDLCTYNSLIHVLCL 300
            FE + CGYNICIH FGCWG L  SL+LFKEMKQ+  S  S SFGPDLCTYNSLIH+LC 
Sbjct: 241 DFELDTCGYNICIHTFGCWGDLGASLSLFKEMKQKEKSSSSCSFGPDLCTYNSLIHILCS 300

Query: 301 VGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIV 360
           VGKV DALIVWEELK SGHEPD FTYR++ QGC KSY+++DA  IF+EM+YNGF P+T+V
Sbjct: 301 VGKVKDALIVWEELKVSGHEPDVFTYRILTQGCSKSYKINDAMKIFSEMQYNGFAPDTVV 360

Query: 361 YNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLK 420
           YNSLL+GLFKAR+++EACQ F+KMVQDGVRAS WTYNI+IDGLFRNGRAEA+Y+LFCDLK
Sbjct: 361 YNSLLNGLFKARKLMEACQLFEKMVQDGVRASCWTYNIIIDGLFRNGRAEAAYTLFCDLK 420

Query: 421 KKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWE 480
           KKGQFVDGVTYSI++LQLC+EG LEEALQLVEEME RGF++DLVT+TSLL+  YKQG+W+
Sbjct: 421 KKGQFVDGVTYSIVVLQLCREGQLEEALQLVEEMEDRGFLVDLVTITSLLVGFYKQGRWD 480

Query: 481 GLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASV 540
             ERLMKHIR G+LVPNVLKWKANME  +K     RKDY+PLF  + D  EI S    ++
Sbjct: 481 WTERLMKHIRGGNLVPNVLKWKANMEALMKNPPKNRKDYTPLFPSRGDFIEIRSFAGQAM 540

Query: 541 AKVNVDDISENTEEKDD-------DNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQS 600
              NVD  SE+ +EKD        D WSSSP++D LAN+ KS+  S +LFSL  GQRV+ 
Sbjct: 541 GN-NVD--SEDCDEKDQEMPFIETDQWSSSPYMDQLANQVKSSEHSSRLFSLRRGQRVKE 600

Query: 601 KGNNSFDIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFH 660
           KG  SFD+DMVNTFLSIFLAKGKLSLACKLF++F+DMGV+PV YTYNS++S+FVKKGY +
Sbjct: 601 KGIGSFDVDMVNTFLSIFLAKGKLSLACKLFEVFTDMGVDPVSYTYNSIMSSFVKKGYIN 660

Query: 661 QAWGIFNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLM 720
           +AWG+ NEM EKVCP D+ATYNLIIQGLGK+GRAD+ASS+LEKLM+QGGYLDIVMYNTL+
Sbjct: 661 EAWGVLNEMDEKVCPTDVATYNLIIQGLGKVGRADIASSILEKLMKQGGYLDIVMYNTLI 720

Query: 721 NALGKAGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCS 780
           NALGKAG +++ +KLFEQMRSSGI PDV+++NTLIEVH+KAG+ KDAY+YLKMMLD+GCS
Sbjct: 721 NALGKAGYINEASKLFEQMRSSGINPDVITYNTLIEVHTKAGQLKDAYRYLKMMLDAGCS 780

Query: 781 PNHVTDTILDFLGREIEKARYEKASIMRDKNSS 800
           PNHVTDTILD LG+EI+K R +KASI+   N++
Sbjct: 781 PNHVTDTILDNLGKEIDKLRLQKASIVCTNNNN 804

[Close]
BLAST of CmaCh17G005560 vs. TrEMBL
Match: F6HG95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03410 PE=4 SV=1)

HSP 1 Score: 1085.9 bits (2807), Expect = 0.0e+00
Identity = 545/797 (68.38%), Postives = 659/797 (82.69%), Query Frame = 1 

Query: 1   MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILR 60
           MRHG        S A     +L D+LLVASI+KTLSE GTR+   +S+ ISE L++QIL 
Sbjct: 1   MRHGR---TLSSSAAAGAGVKLGDMLLVASISKTLSERGTRSPDLESIPISESLVVQILG 60

Query: 61  SRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSG--YFHEVPLLLSSMKRDGVD 120
             S+    K++FF+WCS   N+ HS   YS IFRI+CR+G  +  +VPLL+SSMK DGV 
Sbjct: 61  RNSIDVFRKVEFFRWCSFRHNYKHSVGAYSHIFRIVCRAGAEFLDQVPLLMSSMKDDGVV 120

Query: 121 VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSI 180
           V   TFK+LLD+ IR+GKFD+ALEILDH+EELGT L    Y+SVLVAL+RKNQ+GLAL +
Sbjct: 121 VGQETFKLLLDSLIRAGKFDSALEILDHIEELGTGLNSYVYDSVLVALIRKNQLGLALPL 180

Query: 181 FFKLFDAFSTGGQEGSA-VPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSF 240
           FFKL      GG EG   VP    +P + ACN+LLVALRK+DM++EF+ VF+KLR  + F
Sbjct: 181 FFKLL-----GGDEGQGGVP----VPESNACNQLLVALRKADMKIEFRNVFEKLRAKKDF 240

Query: 241 EFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKV 300
           + +  GYNICIHAFGCWG L T+L LFKEMK +SL S SFGPDLCTYNSLI VLCLVGKV
Sbjct: 241 DLDTQGYNICIHAFGCWGDLGTALNLFKEMKDKSLNSSSFGPDLCTYNSLIRVLCLVGKV 300

Query: 301 NDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSL 360
            DALIVWEELKGSGHEPDAFTYR++IQGC KSYRMDDA  IFNEM+YNGF P+TIVYN+L
Sbjct: 301 KDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNGFCPDTIVYNTL 360

Query: 361 LDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQ 420
           LDGLFKAR+V+EACQ F+KMV+DGVRAS WT+NI+I GLFRNGRA A Y+LFCDLKKKG+
Sbjct: 361 LDGLFKARKVMEACQVFEKMVEDGVRASCWTHNIVICGLFRNGRAAAGYTLFCDLKKKGK 420

Query: 421 FVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLER 480
           FVDG+TYSI++LQLC+EG LEEALQLVEEMEARGFV+DLVT+TSLLI  +KQG+W+  ER
Sbjct: 421 FVDGITYSIVVLQLCREGQLEEALQLVEEMEARGFVVDLVTITSLLIGFHKQGRWDWTER 480

Query: 481 LMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVN 540
           LMKHIR+G+LVPNVL WKANME  +K  +++RKDY+P+F  + +LSEI+S  +++  +++
Sbjct: 481 LMKHIRDGNLVPNVLNWKANMEAYMKAPQSRRKDYTPMFPSEGNLSEIMSLISSADTEMD 540

Query: 541 VDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMV 600
               SE    + +D WSSSP++D LA++ KS   S QL SLS GQRVQ+KG +SFDIDMV
Sbjct: 541 GSPGSEEDVAQHEDQWSSSPYMDQLASQLKSIDVSSQLLSLSRGQRVQAKGIDSFDIDMV 600

Query: 601 NTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGE 660
           NT+LSIFLAKGKLSLACKLF+IFS+MGV+PV YTYNSM++AFVKKGYF++AWG+F+EMGE
Sbjct: 601 NTYLSIFLAKGKLSLACKLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFNEAWGVFHEMGE 660

Query: 661 KVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDD 720
           KVCP DIATYN+IIQGLGKMGRADLAS+VL+ LM+QGGYLDIVMYNTL+NALGKAGR+D+
Sbjct: 661 KVCPPDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDE 720

Query: 721 VNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDF 780
             KLFEQMRSSGI PDVV+FNTLIE+H+KAG+ K AYK+LK+MLD+GCSPNHVTDT LDF
Sbjct: 721 ATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAGCSPNHVTDTTLDF 780

Query: 781 LGREIEKARYEKASIMR 795
           LG+EIEK RY+KASI+R
Sbjct: 781 LGKEIEKLRYKKASIIR 785

[Close]
BLAST of CmaCh17G005560 vs. TrEMBL
Match: B9GRT7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s18390g PE=4 SV=2)

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 543/781 (69.53%), Postives = 646/781 (82.71%), Query Frame = 1 

Query: 22  LADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILRSRSVHPSNKLDFFKWCSLSPN 81
           + ++LLVA +TKTLSESGTR+L   S+ +SE L+LQILR  S+  S K++FFKWCS+   
Sbjct: 1   MGNILLVAYLTKTLSESGTRSLDPDSIPLSESLVLQILRRNSLDSSKKMEFFKWCSVRHI 60

Query: 82  FSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDVDSHTFKVLLDAFIRSGKFDAAL 141
           + HS STYSQ+F  LCRSGY  EVP LL+SMK DGV V S TFK+LLDAFIRSGKFD+AL
Sbjct: 61  YKHSVSTYSQMFSTLCRSGYLDEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSAL 120

Query: 142 EILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFDAFSTGGQEGSAVPSFSF 201
           +ILDHMEELG++   + Y+S++VAL +KNQVGLALSI FKL +A S G +E +   S   
Sbjct: 121 DILDHMEELGSNPNPHMYDSIIVALAKKNQVGLALSIMFKLLEA-SDGNEENAVGVS--- 180

Query: 202 LPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEFNVCGYNICIHAFGCWGYLDTSL 261
           LP ++ACN LLVALR  +M+VEFK VF KLR    FE N  GYNICIHAFGCWG L TSL
Sbjct: 181 LPGSVACNALLVALRNGEMKVEFKTVFAKLRGKGGFELNTWGYNICIHAFGCWGDLTTSL 240

Query: 262 ALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDALIVWEELKGSGHEPDAFTYRL 321
            LFKEMK++SL S S  PDLCTYNSLIHVLCL GKV DA+IV+EELK SGHEPDAFTYR+
Sbjct: 241 RLFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRI 300

Query: 322 IIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLDGLFKARRVVEACQFFDKMVQDG 381
           +IQGCCKSY+M+DAT IF+EM+YNGF+P+T+VYNSLLDG+FKAR+V+EACQ F+KMVQDG
Sbjct: 301 LIQGCCKSYQMEDATKIFSEMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQDG 360

Query: 382 VRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVDGVTYSIIILQLCKEGLLEEAL 441
           VRAS WTYNILIDGL +NGRAEA Y+LFC LKKKGQFVD VTYSI++L LC++G LEEAL
Sbjct: 361 VRASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQFVDAVTYSIVVLLLCRKGHLEEAL 420

Query: 442 QLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLMKHIREGDLVPNVLKWKANMEDS 501
            LVEEME RGFV+DL+T+TSLLIA +KQG+W+  ERLMKHIR+ +L+PNVLKW+A+ME S
Sbjct: 421 HLVEEMEERGFVVDLITITSLLIAFHKQGRWDCTERLMKHIRDVNLLPNVLKWRADMEAS 480

Query: 502 VKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDD---ISENTEEKDDDNWSSSPH 561
           +K     R+DY+P+F     L EI+SS   S  K   DD     E +   D D WSSSP+
Sbjct: 481 LKNPPRSREDYTPMFPSTGGLQEIMSS--ISSPKSRSDDGATEDEKSSSADTDQWSSSPY 540

Query: 562 VDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSIFLAKGKLSLACKLFD 621
           +D LAN+AKST  S QLFSL+ GQRVQ+KG  SFDIDMVNTFLSIFLAKGKLSLACKLF+
Sbjct: 541 MDHLANQAKSTDLSSQLFSLARGQRVQAKGAGSFDIDMVNTFLSIFLAKGKLSLACKLFE 600

Query: 622 IFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPADIATYNLIIQGLGKMG 681
           IF+DMGV+PV YTYNS++S+FVKKGYF++AW +FNEMGEKVCP DIATYNL+IQGLGKMG
Sbjct: 601 IFTDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCPPDIATYNLVIQGLGKMG 660

Query: 682 RADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFEQMRSSGIYPDVVSFN 741
           RADLASSVL+KLM+QGGYLDIVMYNTL++ALGKAGR+D+ N LFEQM+ SG+ PDVV++N
Sbjct: 661 RADLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLFEQMKISGLNPDVVTYN 720

Query: 742 TLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFLGREIEKARYEKASIMRDKNS 800
            +IEVHSK GR KDAYK+LKMMLD+GC PNHVTDT LDFL +EIEK RY+KASIMR K+ 
Sbjct: 721 IMIEVHSKTGRLKDAYKFLKMMLDAGCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 775

[Close]
BLAST of CmaCh17G005560 vs. TAIR10
Match: AT4G01570.1 (AT4G01570.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 984.9 bits (2545), Expect = 2.8e-287
Identity = 496/805 (61.61%), Postives = 631/805 (78.39%), Query Frame = 1 

Query: 1   MRHGIGGFVA-----MESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLL 60
           MRHG G  V+     +         +L ++LLVAS++KTLS+SGTR+L   S+ ISEP++
Sbjct: 1   MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60

Query: 61  LQILRSRSVHPSNKLDFFKWC-SLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKR 120
           LQILR  S+ PS KLDFF+WC SL P + HSA+ YSQIFR +CR+G   EVP LL SMK 
Sbjct: 61  LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120

Query: 121 DGVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGL 180
           DGV++D    K+LLD+ IRSGKF++AL +LD+MEELG  L  + Y+SVL+ALV+K+++ L
Sbjct: 121 DGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL 180

Query: 181 ALSIFFKLFDAFSTGGQEGSA-VPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRT 240
           ALSI FKL +A      + +  V   S+LP  +A NELLV LR++DMR EFK VF+KL+ 
Sbjct: 181 ALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG 240

Query: 241 IRSFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLV-SVSFGPDLCTYNSLIHVLC 300
           ++ F+F+   YNICIH FGCWG LD +L+LFKEMK+RS V   SFGPD+CTYNSLIHVLC
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300

Query: 301 LVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTI 360
           L GK  DALIVW+ELK SGHEPD  TYR++IQGCCKSYRMDDA  I+ EM+YNGFVP+TI
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360

Query: 361 VYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDL 420
           VYN LLDG  KAR+V EACQ F+KMVQ+GVRAS WTYNILIDGLFRNGRAEA ++LFCDL
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420

Query: 421 KKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQW 480
           KKKGQFVD +T+SI+ LQLC+EG LE A++LVEEME RGF +DLVT++SLLI  +KQG+W
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480

Query: 481 EGLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAAS 540
           +  E+LMKHIREG+LVPNVL+W A +E S+K  ++K KDY+P+F  K    +I+S   + 
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSE 540

Query: 541 VAKVNVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSF 600
               + +++S      +DD WSSSP++D LA++         LF L+ GQRV++K  +SF
Sbjct: 541 DDGASAEEVS----PMEDDPWSSSPYMDQLAHQ---RNQPKPLFGLARGQRVEAK-PDSF 600

Query: 601 DIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVNPV-RYTYNSMLSAFVKKGYFHQAWGI 660
           D+DM+NTFLSI+L+KG LSLACKLF+IF+ MGV  +  YTYNSM+S+FVKKGYF  A G+
Sbjct: 601 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 660

Query: 661 FNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGK 720
            ++M E  C ADIATYN+IIQGLGKMGRADLAS+VL++L +QGGYLDIVMYNTL+NALGK
Sbjct: 661 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 720

Query: 721 AGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT 780
           A R+D+  +LF+ M+S+GI PDVVS+NT+IEV+SKAG+ K+AYKYLK MLD+GC PNHVT
Sbjct: 721 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 780

Query: 781 DTILDFLGREIEKARYEKASIMRDK 797
           DTILD+LG+E+EKAR++KAS +R+K
Sbjct: 781 DTILDYLGKEMEKARFKKASFVRNK 797

[Close]
BLAST of CmaCh17G005560 vs. TAIR10
Match: AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-54
Identity = 170/749 (22.70%), Postives = 333/749 (44.46%), Query Frame = 1 

Query: 38  SGTRTLQHQSLSISEPLLLQILRSRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILC 97
           S   TL   S       ++ +LR R    +  +++F+W        H   +Y+ +  ++ 
Sbjct: 51  SAENTLSALSFKPQPEFVIGVLR-RLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMA 110

Query: 98  RSGYFHEVPLLLSSMKRDGVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELN 157
           R   F  +  +L  M   G     +T   ++   +++ K     +++  M +       +
Sbjct: 111 RCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFS 170

Query: 158 TYNSVLVALVRKNQVGLALSIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRK 217
            Y +++ A    N   + L++F ++ +                + P       L+    K
Sbjct: 171 AYTTLIGAFSAVNHSDMMLTLFQQMQE--------------LGYEPTVHLFTTLIRGFAK 230

Query: 218 SDMRVEFKMVFDKLRTIRSFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSF 277
                    + D++++  S + ++  YN+CI +FG  G +D +   F E++   L     
Sbjct: 231 EGRVDSALSLLDEMKS-SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK---- 290

Query: 278 GPDLCTYNSLIHVLCLVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATA 337
            PD  TY S+I VLC   ++++A+ ++E L+ +   P  + Y  +I G   + + D+A +
Sbjct: 291 -PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 350

Query: 338 IFNEMEYNGFVPNTIVYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLF 397
           +       G +P+ I YN +L  L K  +V EA + F++M +D    +  TYNILID L 
Sbjct: 351 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLC 410

Query: 398 RNGRAEASYSLFCDLKKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLV 457
           R G+ + ++ L   ++K G F +  T +I++ +LCK   L+EA  + EEM+ +    D +
Sbjct: 411 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 470

Query: 458 TVTSLLIAMYKQGQWEGLERLMKHIREGDLVPNVLKWKANMEDSVKY--QKNKRKDYSPL 517
           T  SL+  + K G+ +   ++ + + + D   N + + + +++   +  +++  K Y  +
Sbjct: 471 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 530

Query: 518 F----SPKEDLSE-----IISSRAASVAKVNVDDISENTEEKDDDNWSSSPHVDLLANRA 577
                SP   L       +  +      +   ++I       D  ++S   H  + A  A
Sbjct: 531 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 590

Query: 578 KSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVN 637
             T    +LF     Q          D    N  +  F   GK++ A +L +     G  
Sbjct: 591 NET---YELFYSMKEQ------GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 650

Query: 638 PVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPADIATYNLIIQGLGKMGRADLASSV 697
           P   TY S++    K     +A+ +F E   K    ++  Y+ +I G GK+GR D A  +
Sbjct: 651 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 710

Query: 698 LEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSK 757
           LE+LM++G   ++  +N+L++AL KA  +++    F+ M+     P+ V++  LI    K
Sbjct: 711 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 768

Query: 758 AGRFKDAYKYLKMMLDSGCSPNHVTDTIL 776
             +F  A+ + + M   G  P+ ++ T +
Sbjct: 771 VRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

[Close]
BLAST of CmaCh17G005560 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-51
Identity = 179/669 (26.76%), Postives = 290/669 (43.35%), Query Frame = 1 

Query: 110 SSMKRDGVDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRK 169
           S M++DG   D  TF +L+DA  ++G F  A + LD M + G    L+TYN+++  L+R 
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411

Query: 170 NQVGLALSIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFD 229
           +++  AL +F         G  E   V      P A      +    KS   V     F+
Sbjct: 412 HRLDDALELF---------GNMESLGVK-----PTAYTYIVFIDYYGKSGDSVSALETFE 471

Query: 230 KLRTIRSFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIH 289
           K++T +    N+   N  +++    G    +  +F  +K   LV     PD  TYN ++ 
Sbjct: 472 KMKT-KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV-----PDSVTYNMMMK 531

Query: 290 VLCLVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVP 349
               VG++++A+ +  E+  +G EPD      +I    K+ R+D+A  +F  M+     P
Sbjct: 532 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 591

Query: 350 NTIVYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLF 409
             + YN+LL GL K  ++ EA + F+ MVQ G   +  T+N L D L +N     +  + 
Sbjct: 592 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 651

Query: 410 CDLKKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQ 469
             +   G   D  TY+ II  L K G ++EA+    +M+   +  D VT+ +L       
Sbjct: 652 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTL------- 711

Query: 470 GQWEGLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSE-IISS 529
                             +P V+K  + +ED+ K   N    Y+    P     E +I S
Sbjct: 712 ------------------LPGVVK-ASLIEDAYKIITNFL--YNCADQPANLFWEDLIGS 771

Query: 530 RAASVAKVNVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKG 589
             A     N    SE                 L+AN     GDS+    L P  R   K 
Sbjct: 772 ILAEAGIDNAVSFSER----------------LVANGICRDGDSI----LVPIIRYSCKH 831

Query: 590 NNSFDIDMVNTFLSIFLAKGKLSLACKLFDIFS-DMGVNPVRYTYNSMLSAFVKKGYFHQ 649
           NN                   +S A  LF+ F+ D+GV P   TYN ++   ++      
Sbjct: 832 NN-------------------VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 891

Query: 650 AWGIFNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMN 709
           A  +F ++    C  D+ATYN ++   GK G+ D    + +++       + + +N +++
Sbjct: 892 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 932

Query: 710 ALGKAGRMDDVNKLFEQMRSSGIY-PDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCS 769
            L KAG +DD   L+  + S   + P   ++  LI+  SK+GR  +A +  + MLD GC 
Sbjct: 952 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 932

Query: 770 PNHVTDTIL 776
           PN     IL
Sbjct: 1012 PNCAIYNIL 932

[Close]
BLAST of CmaCh17G005560 vs. TAIR10
Match: AT1G62590.1 (AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 196.4 bits (498), Expect = 6.5e-50
Identity = 144/560 (25.71%), Postives = 265/560 (47.32%), Query Frame = 1 

Query: 240 NVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVND 299
           ++  +N  + A       D  ++L ++M++  +V       L TYN LI+  C   +++ 
Sbjct: 84  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-----GLYTYNILINCFCRRSQISL 143

Query: 300 ALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLD 359
           AL +  ++   G+EP   T   ++ G C   R+ DA A+ ++M   G+ P+TI + +L+ 
Sbjct: 144 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 203

Query: 360 GLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFV 419
           GLF   +  EA    D+MVQ G + +  TY ++++GL + G  + + +L   ++      
Sbjct: 204 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 263

Query: 420 DGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLM 479
           D V ++ II  LCK   +++AL L +EME +G   ++VT +SL+  +   G+W    +L+
Sbjct: 264 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 323

Query: 480 KHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVD 539
             + E  + PN++ + A ++  VK  K         F   E L                D
Sbjct: 324 SDMIEKKINPNLVTFNALIDAFVKEGK---------FVEAEKL---------------YD 383

Query: 540 DISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNT 599
           D+ + + + D   ++S  +   + +R      + Q+F     +          D+   NT
Sbjct: 384 DMIKRSIDPDIFTYNSLVNGFCMHDRLDK---AKQMFEFMVSKDCFP------DVVTYNT 443

Query: 600 FLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKV 659
            +  F    ++    +LF   S  G+     TY +++      G    A  +F +M    
Sbjct: 444 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 503

Query: 660 CPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVN 719
            P DI TY++++ GL   G+ + A  V + + +    LDI +Y T++  + KAG++DD  
Sbjct: 504 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 563

Query: 720 KLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT-DTILDFL 779
            LF  +   G+ P+VV++NT+I         ++AY  LK M + G  PN  T +T++   
Sbjct: 564 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 603

Query: 780 GREIEKARYEKASIMRDKNS 799
            R+ +KA    A ++R+  S
Sbjct: 624 LRDGDKA--ASAELIREMRS 603

[Close]
BLAST of CmaCh17G005560 vs. TAIR10
Match: AT3G22470.1 (AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-47
Identity = 142/530 (26.79%), Postives = 248/530 (46.79%), Query Frame = 1 

Query: 280 DLCTYNSLIHVLCLVGKVNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIF 339
           D+ T   +I+  C   K+  A  V       G+EPD  T+  ++ G C   R+ +A A+ 
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163

Query: 340 NEMEYNGFVPNTIVYNSLLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRN 399
           + M      P+ +  ++L++GL    RV EA    D+MV+ G +    TY  +++ L ++
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223

Query: 400 GRAEASYSLFCDLKKKGQFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTV 459
           G +  +  LF  ++++      V YSI+I  LCK+G  ++AL L  EME +G   D+VT 
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283

Query: 460 TSLLIAMYKQGQWEGLERLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPK 519
           +SL+  +   G+W+   ++++ +   +++P+V+ + A ++  VK  K        L   K
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK--------LLEAK 343

Query: 520 EDLSEIISSRAASVAKVNVDDISENTEE----KDDDNWSSSPHVDLLAN----------- 579
           E  +E+I+   A       D I+ N+      K++    ++   DL+ +           
Sbjct: 344 ELYNEMITRGIAP------DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 403

Query: 580 -------RAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSIFLAKGKLSLACKLF 639
                  +AK   D ++LF     + + SKG     I   NT +  F   GKL+ A +LF
Sbjct: 404 ILINSYCKAKRVDDGMRLF-----REISSKGLIPNTI-TYNTLVLGFCQSGKLNAAKELF 463

Query: 640 DIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPADIATYNLIIQGLGKM 699
                 GV P   TY  +L      G  ++A  IF +M +      I  YN+II G+   
Sbjct: 464 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 523

Query: 700 GRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFEQMRSSGIYPDVVSF 759
            + D A S+   L ++G   D+V YN ++  L K G + + + LF +M+  G  PD  ++
Sbjct: 524 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 583

Query: 760 NTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT-DTILDFLG-REIEKA 786
           N LI  H        + + ++ M   G S +  T   ++D L  R ++K+
Sbjct: 584 NILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613

[Close]
BLAST of CmaCh17G005560 vs. NCBI nr
Match: gi|659119716|ref|XP_008459805.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis melo])

HSP 1 Score: 1374.4 bits (3556), Expect = 0.0e+00
Identity = 683/803 (85.06%), Postives = 739/803 (92.03%), Query Frame = 1 

Query: 1   MRHGI--GGFVAMES--RATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLL 60
           MRHG     F+ +ES  R   TLS+L+DLLLVASITKTLSESGTRTLQH SL IS PLLL
Sbjct: 1   MRHGRTRACFLCIESHSRTVSTLSQLSDLLLVASITKTLSESGTRTLQHHSLPISHPLLL 60

Query: 61  QILRSRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDG 120
           QIL SRS++PS+KLDFFKWCSL+PNF+HS STYSQIF ILCRSGY HEVP LL SMKRDG
Sbjct: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120

Query: 121 VDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLAL 180
           V VDSHTFKVLLDAFIRSGK+DAALEILDHME+LGTSLELNTYNSVLVAL+RKNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180

Query: 181 SIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRS 240
           SIFFKLFD  + GGQ+ SA  SF FLPN+LACNELLVALRK DMRVEF+ VFDKLR I +
Sbjct: 181 SIFFKLFDGLNNGGQDDSAATSFHFLPNSLACNELLVALRKLDMRVEFRKVFDKLRAIEA 240

Query: 241 FEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGK 300
           FEFNVCGYNICI+AFGCWGYLDT+L+LFKEMK++SLV  SFGPDLCTYNS+I VLCLVGK
Sbjct: 241 FEFNVCGYNICIYAFGCWGYLDTALSLFKEMKEKSLVLGSFGPDLCTYNSIIRVLCLVGK 300

Query: 301 VNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNS 360
           V DALIVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNG +P+ IVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSYRMDDATMIFNEMEYNGLIPDIIVYNS 360

Query: 361 LLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKG 420
           LL+GLFKAR+V EACQ FDKMVQ+ VRASPWTYNILIDGLFRNGRAEA Y+LFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420

Query: 421 QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLE 480
           QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFV+DL+T+TSLLIAM+KQGQWEGLE
Sbjct: 421 QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWEGLE 480

Query: 481 RLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKV 540
           RLMKHIREGDLVPNVLKWK NMEDS+KYQKNKR+D+S LFSPKEDL E+ISSRA+S A+V
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEV 540

Query: 541 NVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDM 600
           N+D+  ENTEE D D WSSSPHVD LAN A ST D LQ FSL  G+R+Q KGNNSFDI+M
Sbjct: 541 NIDNSVENTEEMDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINM 600

Query: 601 VNTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMG 660
           VNTFLSIFLAKGKL+LACKLF+IFSDMGVNPV+YTYNSMLS+FVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660

Query: 661 EKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMD 720
           E VCPADIATYN+IIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTL+NALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720

Query: 721 DVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILD 780
           DVNKLF+QMR+SGI PDVV+FNTLIEVHSKAGRFKDAYK+LKMMLDSGCSPNHVTDT LD
Sbjct: 721 DVNKLFDQMRNSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTTLD 780

Query: 781 FLGREIEKARYEKASIMRDKNSS 800
           FLGREIEKARYEKASI+RDKNSS
Sbjct: 781 FLGREIEKARYEKASIIRDKNSS 803

[Close]
BLAST of CmaCh17G005560 vs. NCBI nr
Match: gi|449445529|ref|XP_004140525.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis sativus])

HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 672/803 (83.69%), Postives = 733/803 (91.28%), Query Frame = 1 

Query: 1   MRHGIGG--FVAMES--RATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLL 60
           MRHG     F+++ES  R   TLS L+ LLL+ASITKTLSESGTRTLQH SL IS PLLL
Sbjct: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60

Query: 61  QILRSRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDG 120
           QIL SRS++PS+KLDFFKWCSL+PNF+HS STYSQIF ILCRSGY HEVP LL SMKRDG
Sbjct: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120

Query: 121 VDVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLAL 180
           V VDSHTFKVLLDAFIRSGK+DAALEILDHME+LGTSLELNTYNSVLVAL+RKNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180

Query: 181 SIFFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRS 240
           SIFFKL D F+ GGQ  SA  +F FLPN+LACNELLVALRK DMRVEFK VFDKLR I S
Sbjct: 181 SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES 240

Query: 241 FEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGK 300
           FEF+V GYNICI+AFGCWGYLDT+L+LFKEMK++SLVS SF PDLCTYNS+IHVLCLVGK
Sbjct: 241 FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 300

Query: 301 VNDALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNS 360
           V DALIVWEELKGSGHEPDAFTYR+IIQGCCKS RMDDAT IFNEMEYNG +P+TIVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 360

Query: 361 LLDGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKG 420
           LL+GLFKAR+V EACQ FDKMVQ+ VRASPWTYNILIDGLFRNGRAEA Y+LFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420

Query: 421 QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLE 480
           Q VD VTYSIIILQLCKE LLEEALQLVEEMEARGFV+DL+T+TSLLIAM+KQGQW+GLE
Sbjct: 421 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 480

Query: 481 RLMKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKV 540
           RLMKHIREGDLVPNVLKWK NME S+KYQKNKRKD+S LFSPKEDLSE+ISSRA+S AKV
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV 540

Query: 541 NVDDISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDM 600
           N+D+  ENTEE+D D+WSSSP+V+ LAN A ST D LQ FS+  G+R+Q K +NSFDI+M
Sbjct: 541 NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM 600

Query: 601 VNTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMG 660
           VNTFLSIFLAKGKL+LACKLF+IFSDMGVNPV+YTYNSMLS+FVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660

Query: 661 EKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMD 720
           E VCPADIATYN+IIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTL+NALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720

Query: 721 DVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILD 780
           DVNKLF QMR+SGI PDVV+FNTLIEVHSKAGR KDAYK+LKMMLDSGCSPNHVTDT LD
Sbjct: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780

Query: 781 FLGREIEKARYEKASIMRDKNSS 800
           FLGRE+EKARYEKASI+RDKNSS
Sbjct: 781 FLGREMEKARYEKASIIRDKNSS 803

[Close]
BLAST of CmaCh17G005560 vs. NCBI nr
Match: gi|590720575|ref|XP_007051367.1| (Pentatricopeptide repeat-containing protein, putative [Theobroma cacao])

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 568/806 (70.47%), Postives = 668/806 (82.88%), Query Frame = 1 

Query: 1   MRHGIGGFVAMESRATPTLS-RLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQIL 60
           MR+G  G  ++ S    + S  L ++LL+AS+TKTLSESGTR L   S+ ISEPL++QIL
Sbjct: 1   MRNGRTGLSSVSSPLLKSPSIHLGNILLIASLTKTLSESGTRNLDPNSIPISEPLVIQIL 60

Query: 61  RSRSVHPSNKLDFFKWC-SLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVD 120
           R  S+ PS KLDFF WC S+ PNF HSA TYS IFR LCRSG+  EVP LL +MK DGV 
Sbjct: 61  RKHSLEPSKKLDFFNWCRSVKPNFKHSAVTYSHIFRTLCRSGFVEEVPNLLFAMKEDGVL 120

Query: 121 VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSI 180
           VDS TFK LLDAFIRSGKFD+ALEILD MEELG  L L  Y+SVLVAL+RK+QVGLALS+
Sbjct: 121 VDSDTFKFLLDAFIRSGKFDSALEILDFMEELGAGLNLRVYDSVLVALIRKDQVGLALSL 180

Query: 181 FFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFE 240
           FFKL +A + G  +G++V S   LP ++A NELLVALRK+ MR EFK VFD LR  R FE
Sbjct: 181 FFKLLEACN-GNDDGNSVDSS--LPGSIAINELLVALRKAHMRREFKQVFDILREKREFE 240

Query: 241 FNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVN 300
           F+ CGYNICIH+FGCWG L  SL LFKEMK++     SFGPDLCTYNSLI VLCLVGKV 
Sbjct: 241 FDTCGYNICIHSFGCWGDLGASLKLFKEMKEKEKSFGSFGPDLCTYNSLIDVLCLVGKVK 300

Query: 301 DALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLL 360
           DAL+VWEELK SGHEPDAFTYR++IQGC KSYRMDDAT IF+EM+YNGF  +T+VYNSLL
Sbjct: 301 DALVVWEELKVSGHEPDAFTYRILIQGCSKSYRMDDATKIFSEMQYNGFAMDTVVYNSLL 360

Query: 361 DGLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQF 420
           +GLFKAR+V+EACQFF+KMVQDGVRAS WTYNILIDGLFRNGRAEA+Y+LFCDLKKKGQF
Sbjct: 361 NGLFKARKVMEACQFFEKMVQDGVRASCWTYNILIDGLFRNGRAEAAYTLFCDLKKKGQF 420

Query: 421 VDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERL 480
           VDG+TYSI++LQLC+EG LE AL+LVEEMEARGF++DLVT+TSLLI  +KQG+W+  ERL
Sbjct: 421 VDGITYSIVVLQLCREGQLEGALRLVEEMEARGFIVDLVTITSLLIGFHKQGRWDWTERL 480

Query: 481 MKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEII----SSRAASVA 540
           MKHIR+G+LVPNVLKWKANME S+K     RKDY+PLF  K D  EI+    S   A   
Sbjct: 481 MKHIRDGNLVPNVLKWKANMEASMKNPPKNRKDYTPLFPSKGDFREIMNLLGSVGQAMGT 540

Query: 541 KVNVDDISENTEEK---DDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNS 600
            ++ +D  E  +EK   D D WSSSP++D LAN+ KST  S QLFSL  GQRVQ KG  S
Sbjct: 541 NLDSEDCDEKDQEKPSIDTDQWSSSPYMDQLANQGKSTERSSQLFSLIRGQRVQEKGIGS 600

Query: 601 FDIDMVNTFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGI 660
           FD+DMVNTFLSIFLAKGKLSLACKLF++F+DMGV+PV YTYNS++S+FVKKGYF++AWG+
Sbjct: 601 FDVDMVNTFLSIFLAKGKLSLACKLFEVFTDMGVDPVSYTYNSIMSSFVKKGYFNEAWGV 660

Query: 661 FNEMGEKVCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGK 720
            NEM EKVCPADIATYNLIIQGLGKMGRAD+ASSVL+KLM+QGGYLD+VMYNTL+NALGK
Sbjct: 661 LNEMDEKVCPADIATYNLIIQGLGKMGRADIASSVLDKLMKQGGYLDVVMYNTLVNALGK 720

Query: 721 AGRMDDVNKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVT 780
           AGR+D+ +KLFEQMR+SGI PDV+++NTLIEVH+KAG+ +DAYK+LKMMLD+GCSPNHVT
Sbjct: 721 AGRVDEASKLFEQMRTSGINPDVITYNTLIEVHTKAGQLQDAYKFLKMMLDAGCSPNHVT 780

Query: 781 DTILDFLGREIEKARYEKASIMRDKN 798
           DTILD LG+EIEK R +KAS++R  N
Sbjct: 781 DTILDNLGKEIEKMRLQKASMVRTDN 803

[Close]
BLAST of CmaCh17G005560 vs. NCBI nr
Match: gi|658045553|ref|XP_008358457.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g01570-like [Malus domestica])

HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 556/787 (70.65%), Postives = 658/787 (83.61%), Query Frame = 1 

Query: 20  SRLADLLLVASITKTLSESGTRTLQH-QSLSISEPLLLQILRSRSVHPSNKLDFFKWCSL 79
           S+L D+LLVA+ITKTLS SGTR L    +L +SEPLL QILR++S+HPS KLDFFKWCSL
Sbjct: 18  SQLGDILLVAAITKTLSTSGTRNLPDPHTLPLSEPLLFQILRAQSLHPSKKLDFFKWCSL 77

Query: 80  SPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDVDSHTFKVLLDAFIRSGKFD 139
           + N  HSA  YS I R   R+G+ HEVP LL SMK DGV VDS TFK LLDAFIRSGKFD
Sbjct: 78  THNIKHSARAYSHILRTASRAGFLHEVPQLLXSMKEDGVVVDSQTFKALLDAFIRSGKFD 137

Query: 140 AALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFFKLFDAFSTGGQEGSAVPS 199
            ALEILD ME++G  L  + YN VLVALVRKNQVGLA++I FKL +A  +          
Sbjct: 138 YALEILDIMEDVGAGLNTDMYNLVLVALVRKNQVGLAMAILFKLLEAGDS---------- 197

Query: 200 FSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEFNVCGYNICIHAFGCWGYLD 259
            + +PN++ACNELLVALRKSDMRV FK VF+KLR    FE +  GYNICIHAFGCWG L 
Sbjct: 198 -TQVPNSIACNELLVALRKSDMRVGFKQVFNKLRESEGFEKDTWGYNICIHAFGCWGDLG 257

Query: 260 TSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDALIVWEELKGSGHEPDAFT 319
           TSL+LF+EMK  +L +V  GPDL TYNSLIHVLCLVGK+NDALIVWEELKGSGHEPDA T
Sbjct: 258 TSLSLFREMKDSNLDNV--GPDLSTYNSLIHVLCLVGKMNDALIVWEELKGSGHEPDAIT 317

Query: 320 YRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLDGLFKARRVVEACQFFDKMV 379
           YR++IQGCC+ YR+DDAT IF+EM+ NG++P+TIVYNSLLDGLFKAR+V + CQ F+KMV
Sbjct: 318 YRILIQGCCRCYRIDDATKIFSEMQLNGYIPDTIVYNSLLDGLFKARKVNDGCQLFEKMV 377

Query: 380 QDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVDGVTYSIIILQLCKEGLLE 439
           Q+GVRAS WTYNILIDGLFRNGRAEA+Y+LFCDLKKKGQFVDGVTYSI++LQLCKEGLLE
Sbjct: 378 QNGVRASTWTYNILIDGLFRNGRAEAAYTLFCDLKKKGQFVDGVTYSIVVLQLCKEGLLE 437

Query: 440 EALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLMKHIREGDLVPNVLKWKANM 499
           EAL LVEEME RGF +DLVT++SL+I +YK+G+W+  ++LMKHIR+G+LVP+VLKWK +M
Sbjct: 438 EALGLVEEMERRGFTVDLVTISSLVIGLYKEGRWDWTDKLMKHIRDGNLVPSVLKWKVDM 497

Query: 500 EDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDDISENTEEKDDD------- 559
           E S+K  +  RKDY+PLF  K DLSEI+S   ++ + ++ D  SE    K+DD       
Sbjct: 498 EASLKNPQRNRKDYTPLFPSKGDLSEIMSLIKSAESTMDADLDSEAARVKEDDKNLSTDT 557

Query: 560 -NWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLSIFLAKGKL 619
             WSSSPH+D LAN+ KST  S QLFSLS GQRVQ+KG N+FDIDMVNTFLS+FLAKGKL
Sbjct: 558 GQWSSSPHMDQLANQLKSTDHSSQLFSLSRGQRVQAKGENTFDIDMVNTFLSLFLAKGKL 617

Query: 620 SLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVCPADIATYNLI 679
           S+ACKLF+IFSD+G NPV YTYNS +S+FVKKGYF++AWG+ NEMGE+VCP DIATYN+I
Sbjct: 618 SIACKLFEIFSDLGENPVSYTYNSXMSSFVKKGYFNEAWGVLNEMGERVCPTDIATYNVI 677

Query: 680 IQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNKLFEQMRSSGI 739
           IQGLGKMGRADLASSVL+KL+EQGGYLD+VMYNTL+NALGKA R+D+VNKLFEQM+SSGI
Sbjct: 678 IQGLGKMGRADLASSVLDKLIEQGGYLDVVMYNTLINALGKASRIDEVNKLFEQMKSSGI 737

Query: 740 YPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFLGREIEKARYEKA 798
            PDVV+FNTLIEVHSKAGR KDAYK+LKMMLD+GC+PNHVTDT LDFLG+EIEK RY+KA
Sbjct: 738 NPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDAGCTPNHVTDTTLDFLGKEIEKMRYQKA 791

[Close]
BLAST of CmaCh17G005560 vs. NCBI nr
Match: gi|1009142863|ref|XP_015888951.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Ziziphus jujuba])

HSP 1 Score: 1100.5 bits (2845), Expect = 0.0e+00
Identity = 560/801 (69.91%), Postives = 654/801 (81.65%), Query Frame = 1 

Query: 1   MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQH-QSLSISEPLLLQIL 60
           MRHG    V    +   +  +L D LLVAS+TKTLS+ GT  L    S+ +SE LLLQIL
Sbjct: 1   MRHGRSFLV----KGQRSHWQLGDHLLVASLTKTLSDCGTHNLPDPHSIPLSESLLLQIL 60

Query: 61  RSRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDV 120
           R++++HPS KL FF+WCSL P+F HSA +YS IFR +CR+GY HEVP LL+SMK+DGV V
Sbjct: 61  RTKTLHPSKKLAFFRWCSLVPDFKHSALSYSHIFRTVCRAGYLHEVPDLLNSMKQDGVVV 120

Query: 121 DSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIF 180
            S TFK LLD+FI S KFD ALEIL  MEELGTSL  + YNSVLVALVRKNQVGLALSIF
Sbjct: 121 HSETFKALLDSFILSSKFDYALEILHVMEELGTSLNTHIYNSVLVALVRKNQVGLALSIF 180

Query: 181 FKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEF 240
           FK+    S              L +++ACN LLVALRK+DMR+EFK VFDKLR    FEF
Sbjct: 181 FKILQGNSQ-------------LLSSIACNMLLVALRKADMRLEFKQVFDKLRDGSGFEF 240

Query: 241 NVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVND 300
           +  GYNICIHAFGCWG L +SL+LF+EMK+      + GPDLCTYNSLI VLC VGKV D
Sbjct: 241 DTWGYNICIHAFGCWGDLGSSLSLFREMKE------TVGPDLCTYNSLILVLCFVGKVKD 300

Query: 301 ALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLD 360
           AL+VWEELKGSGHEPDAFTYR++IQGC KSYRMDDA  IFNEM++NG  P+TIVYN+LLD
Sbjct: 301 ALVVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDALKIFNEMQHNGIFPDTIVYNALLD 360

Query: 361 GLFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFV 420
           GLFKAR+V EACQ F+KMVQDGVRAS WT+NILIDGLFRNGRAEA Y+LFCDLKKKGQFV
Sbjct: 361 GLFKARKVNEACQLFEKMVQDGVRASSWTHNILIDGLFRNGRAEAGYTLFCDLKKKGQFV 420

Query: 421 DGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLM 480
           D +TYSI++LQLCKEGLL+EAL+ VEEME RGFV+DLVTVTSLLI MYKQG+W+  +RLM
Sbjct: 421 DNITYSIVVLQLCKEGLLDEALRSVEEMEDRGFVVDLVTVTSLLIGMYKQGRWDWSDRLM 480

Query: 481 KHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVD 540
           KHIR G+LVPNVL+WKA+ME S+K  + KR+D +P F  + D SEI++      A+  VD
Sbjct: 481 KHIRNGNLVPNVLRWKADMEASMKSSQTKREDLTPFFPSRGDFSEIMN--LIRYAESTVD 540

Query: 541 DIS-ENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVN 600
            +  E     D D WSSSP++D LAN+  ST    QLFSLS GQRVQ+KG +SFDIDMVN
Sbjct: 541 GVKDEENSSADTDQWSSSPYMDQLANQVNSTDHPSQLFSLSRGQRVQAKGVDSFDIDMVN 600

Query: 601 TFLSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEK 660
           TFLSIFLAKGKLSLACKLF+IFSDMG NPV YTYNSM+S+FVKKGYF++AWG+ NEMGE 
Sbjct: 601 TFLSIFLAKGKLSLACKLFEIFSDMGANPVSYTYNSMMSSFVKKGYFNEAWGVLNEMGEN 660

Query: 661 VCPADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDV 720
           VCPADIATYN+IIQGLGKMGRADLASSVL+KLM+QGGYLDIVMYNTL+NALGKAGRMD+V
Sbjct: 661 VCPADIATYNVIIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLINALGKAGRMDEV 720

Query: 721 NKLFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFL 780
           NKLFEQMR+SGI PD+V+FNTLIEVHSKAGR K+AYK+LKMMLD+GC+PNH+TDT LDFL
Sbjct: 721 NKLFEQMRTSGINPDIVTFNTLIEVHSKAGRLKEAYKFLKMMLDAGCTPNHITDTTLDFL 776

Query: 781 GREIEKARYEKASIMRDKNSS 800
           G+EI+K RY+KAS+M +K+ S
Sbjct: 781 GKEIDKLRYQKASMMPNKDDS 776

The following BLAST results are available for this feature:
BLAST of CmaCh17G005560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP299_ARATH5.0e-28661.61Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN... [more]
PP217_ARATH2.0e-5322.70Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN... [more]
PP344_ARATH3.6e-5026.76Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
PPR90_ARATH1.2e-4825.71Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN... [more]
PP247_ARATH5.4e-4626.79Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
BLAST of CmaCh17G005560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFG9_CUCSA0.0e+0083.69Uncharacterized protein OS=Cucumis sativus GN=Csa_6G101450 PE=4 SV=1[more]
A0A061DRT6_THECC0.0e+0070.47Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
A0A0D2QQS9_GOSRA0.0e+0068.02Uncharacterized protein OS=Gossypium raimondii GN=B456_001G149600 PE=4 SV=1[more]
F6HG95_VITVI0.0e+0068.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03410 PE=4 SV=... [more]
B9GRT7_POPTR0.0e+0069.53Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s18390g PE=4 SV=2[more]
BLAST of CmaCh17G005560 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01570.12.8e-28761.61 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G06920.11.1e-5422.70 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G31850.12.0e-5126.76 proton gradient regulation 3[more]
AT1G62590.16.5e-5025.71 pentatricopeptide (PPR) repeat-containing protein[more]
AT3G22470.13.0e-4726.79 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh17G005560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119716|ref|XP_008459805.1|0.0e+0085.06PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis melo][more]
gi|449445529|ref|XP_004140525.1|0.0e+0083.69PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis sativu... [more]
gi|590720575|ref|XP_007051367.1|0.0e+0070.47Pentatricopeptide repeat-containing protein, putative [Theobroma cacao][more]
gi|658045553|ref|XP_008358457.1|0.0e+0070.65PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g... [more]
gi|1009142863|ref|XP_015888951.1|0.0e+0069.91PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Ziziphus jujub... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G005560.1CmaCh17G005560.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 244..270
score: 6.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 349..397
score: 8.7E-15coord: 422..466
score: 1.1E-8coord: 279..328
score: 4.7E-14coord: 698..741
score: 2.8E-12coord: 630..675
score: 1.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 108..166
score: 8.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 122..151
score: 2.4E-4coord: 352..383
score: 8.2E-8coord: 700..734
score: 2.4E-11coord: 388..416
score: 1.4E-5coord: 88..120
score: 0.0023coord: 244..272
score: 5.5E-4coord: 282..316
score: 3.0E-6coord: 630..663
score: 3.8E-7coord: 666..698
score: 1.2E-4coord: 735..768
score: 4.5E-9coord: 422..455
score: 1.3E-7coord: 317..351
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 350..384
score: 11.542coord: 85..119
score: 8.923coord: 315..349
score: 12.266coord: 663..697
score: 9.964coord: 733..767
score: 12.441coord: 240..274
score: 8.21coord: 280..314
score: 11.641coord: 385..419
score: 10.019coord: 155..185
score: 6.38coord: 628..662
score: 9.997coord: 455..489
score: 8.342coord: 698..732
score: 13.713coord: 120..154
score: 11.06coord: 420..454
score: 11.794coord: 593..627
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 631..763
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 32..153
score: 0.0coord: 630..775
score: 0.0coord: 239..491
score:
NoneNo IPR availablePANTHERPTHR24015:SF479SUBFAMILY NOT NAMEDcoord: 32..153
score: 0.0coord: 630..775
score: 0.0coord: 239..491
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G005560Cucsa.349850Cucumber (Gy14) v1cgycmaB0952
CmaCh17G005560Cla006732Watermelon (97103) v1cmawmB360
CmaCh17G005560Csa6G101450Cucumber (Chinese Long) v2cmacuB376
CmaCh17G005560MELO3C022296Melon (DHL92) v3.5.1cmameB318
CmaCh17G005560CSPI06G08030Wild cucumber (PI 183967)cmacpiB380
CmaCh17G005560CmoCh17G005370Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G005560Lsi09G017040Bottle gourd (USVL1VR-Ls)cmalsiB338
CmaCh17G005560Cp4.1LG12g04710Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G005560MELO3C022296.2Melon (DHL92) v3.6.1cmamedB370
CmaCh17G005560CsaV3_6G008430Cucumber (Chinese Long) v3cmacucB0447
CmaCh17G005560Cla97C06G111710Watermelon (97103) v2cmawmbB371
CmaCh17G005560Bhi12G001998Wax gourdcmawgoB0457
CmaCh17G005560Bhi12G002036Wax gourdcmawgoB0467
CmaCh17G005560CsGy6G008090Cucumber (Gy14) v2cgybcmaB759
CmaCh17G005560Carg26118Silver-seed gourdcarcmaB1333
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G005560Cucurbita pepo (Zucchini)cmacpeB390
CmaCh17G005560Cucurbita pepo (Zucchini)cmacpeB384
CmaCh17G005560Silver-seed gourdcarcmaB0108
CmaCh17G005560Silver-seed gourdcarcmaB0109
CmaCh17G005560Watermelon (97103) v2cmawmbB385
CmaCh17G005560Cucurbita maxima (Rimu)cmacmaB386
CmaCh17G005560Cucurbita maxima (Rimu)cmacmaB381
CmaCh17G005560Cucurbita moschata (Rifu)cmacmoB372
CmaCh17G005560Cucurbita moschata (Rifu)cmacmoB378
CmaCh17G005560Watermelon (97103) v1cmawmB351