Cucsa.349850 (gene) Cucumber (Gy14) v1

BLAST of Cucsa.349850 vs. Swiss-Prot
Match: PP299_ARATH (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1)

HSP 1 Score: 978.8 bits (2529), Expect = 3.6e-284
Identity = 494/805 (61.37%), Postives = 627/805 (77.89%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTA-STLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLL 60
           MRHGR      +I   S    S    L ++LL+AS++KTLS+SGTR+L  +S+PIS P++
Sbjct: 1   MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60

Query: 61  LQILHSRSLNPSHKLDFFKWC-SLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKR 120
           LQIL   S++PS KLDFF+WC SL P + HS + YSQIF  +CR+G L EVP LL SMK 
Sbjct: 61  LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120

Query: 121 DGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGL 180
           DGV++D    K+LLD+ IRSGK+++AL +LD+ME+LG  L  + Y+SVL+AL++K+++ L
Sbjct: 121 DGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL 180

Query: 181 ALSIFFKLLDGFNNGGQVDSAATTF-HFLPNSLACNELLVALRKLDMRVEFKKVFDKLRA 240
           ALSI FKLL+  +N    D+       +LP ++A NELLV LR+ DMR EFK+VF+KL+ 
Sbjct: 181 ALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG 240

Query: 241 IESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLV-SESFSPDLCTYNSIIHVLC 300
           ++ F+F  + YNICI+ FGCWG LD ALSLFKEMKE+S V   SF PD+CTYNS+IHVLC
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300

Query: 301 LVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTI 360
           L GK KDALIVW+ELK SGHEPD  TYRI+IQGCCKS RMDDA  I+ EM+YNG +PDTI
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360

Query: 361 VYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDL 420
           VYN LL+G  KARKVTEACQLF+KMVQE VRAS WTYNILIDGLFRNGRAEAG+TLFCDL
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420

Query: 421 KKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQW 480
           KKKGQ VDA+T+SI+ LQLC+E  LE A++LVEEME RGF VDL+TI+SLLI  HKQG+W
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480

Query: 481 DGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASS 540
           D  E+LMKHIREG+LVPNVL+W   +E S+K  ++K KD++ +F  K    +++S   S 
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSE 540

Query: 541 AAKVNIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSF 600
               +   S E     + D WSSSPY+++LA+  N    +   F + +G+R++ K D SF
Sbjct: 541 ----DDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPL---FGLARGQRVEAKPD-SF 600

Query: 601 DINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPV-KYTYNSMLSSFVKKGYFHQAWGI 660
           D++M+NTFLSI+L+KG L+LACKLFEIF+ MGV  +  YTYNSM+SSFVKKGYF  A G+
Sbjct: 601 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 660

Query: 661 FNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGK 720
            ++M EN C ADIATYNVIIQGLGKMGRADLAS+VL++L +QGGYLDIVMYNTLINALGK
Sbjct: 661 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 720

Query: 721 AGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVT 780
           A R+D+  +LF  M+++GINPDVV++NT+IEV+SKAG+LK+AYK+LK MLD+GC PNHVT
Sbjct: 721 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 780

Query: 781 DTTLDFLGREMEKARYEKASIIRDK 801
           DT LD+LG+EMEKAR++KAS +R+K
Sbjct: 781 DTILDYLGKEMEKARFKKASFVRNK 797

BLAST of Cucsa.349850 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.0e-52
Identity = 191/716 (26.68%), Postives = 321/716 (44.83%), Query Frame = 1

Query: 92   TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
            T++ +   LC++G   E    LD M+  G+  + HT+  L+   +R  + D ALE+  +M
Sbjct: 365  TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424

Query: 152  EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFL----- 211
            E LG      TY                  I F  +D +   G   SA  TF  +     
Sbjct: 425  ESLGVKPTAYTY------------------IVF--IDYYGKSGDSVSALETFEKMKTKGI 484

Query: 212  -PNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTAL 271
             PN +ACN  L +L K     E K++F  L+ I     SV  YN+ +  +   G +D A+
Sbjct: 485  APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT-YNMMMKCYSKVGEIDEAI 544

Query: 272  SLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRI 331
             L  EM E         PD+   NS+I+ L    +V +A  ++  +K    +P   TY  
Sbjct: 545  KLLSEMMENGC-----EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 604

Query: 332  IIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQED 391
            ++ G  K+ ++ +A  +F  M   G  P+TI +N+L + L K  +VT A ++  KM+   
Sbjct: 605  LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 664

Query: 392  VRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEAL 451
                 +TYN +I GL +NG+ +     F  +KK     D VT   ++  + K  L+E+A 
Sbjct: 665  CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAY 724

Query: 452  QLVE-------EMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKH--IREGD--LVPN 511
            +++        +  A  F  DLI   S+L            ERL+ +   R+GD  LVP 
Sbjct: 725  KIITNFLYNCADQPANLFWEDLIG--SILAEAGIDNAVSFSERLVANGICRDGDSILVPI 784

Query: 512  VLKWKINMEYSIKYQKNKRKDFSSLFS---------PKEDLSEVISSRASSAAKVNIDNS 571
            +        YS K+  N      +LF          PK     ++      A  + I   
Sbjct: 785  I-------RYSCKH--NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 844

Query: 572  FENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFL 631
                + +           N L +    +  I + F + +     E + N+   N+V   +
Sbjct: 845  VF-LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV---I 904

Query: 632  SIFLAKGKLNLACKLF-EIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVC 691
            S  +  G ++ A  L+ ++ SD   +P   TY  ++    K G  ++A  +F  M +  C
Sbjct: 905  SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 964

Query: 692  PADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 751
              + A YN++I G GK G AD A ++ ++++++G   D+  Y+ L++ L   GR+D+   
Sbjct: 965  RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 1024

Query: 752  LFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDA-YKFLKMMLDSGCSPNHVTDTTL 780
             F +++ SG+NPDVV +N +I    K+ RL++A   F +M    G +P+  T  +L
Sbjct: 1025 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038

HSP 2 Score: 170.6 bits (431), Expect = 6.8e-41
Identity = 147/630 (23.33%), Postives = 280/630 (44.44%), Query Frame = 1

Query: 186 LLDGFNNGGQVDSAATTFHFLPNSLA---CNELLVALRKLDMRVEFKKVFDKLRAIESFE 245
           +L+     G+++  A  F  +   +     N  L   + L ++   K+    LR +  F 
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183

Query: 246 F--SVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 305
           F  + Y YN  I+      +   A+ +++ M     + E F P L TY+S++  L     
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-----ILEGFRPSLQTYSSLMVGLGKRRD 243

Query: 306 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 365
           +   + + +E++  G +P+ +T+ I I+   ++ ++++A  I   M+  G  PD + Y  
Sbjct: 244 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 303

Query: 366 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 425
           L++ L  ARK+  A ++F+KM     +    TY  L+D    N   ++    + +++K G
Sbjct: 304 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 363

Query: 426 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 485
            + D VT++I++  LCK     EA   ++ M  +G + +L T  +L+  + +  + D   
Sbjct: 364 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 423

Query: 486 RLMKHIREGDLVPNVLKWKINMEYSIK----------YQKNKRKDFSSLFSPKEDLSEVI 545
            L  ++    + P    + + ++Y  K          ++K K K  +           ++
Sbjct: 424 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA---------PNIV 483

Query: 546 SSRAS--SAAKVNIDNSFENT--EERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGR 605
           +  AS  S AK   D   +      +D+     S   N +    +   +I +   +    
Sbjct: 484 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL---- 543

Query: 606 RIQEKQDNSF--DINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFV 665
            + E  +N    D+ +VN+ ++      +++ A K+F    +M + P   TYN++L+   
Sbjct: 544 -LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 603

Query: 666 KKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIV 725
           K G   +A  +F  M +  CP +  T+N +   L K     LA  +L K+M+ G   D+ 
Sbjct: 604 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 663

Query: 726 MYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMM 785
            YNT+I  L K G++ +    F QM+   + PD VT  TL+    KA  ++DAYK +   
Sbjct: 664 TYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNF 723

Query: 786 LDSGCSPNHVTDTTLDFLGREMEKARYEKA 795
           L   C+         D +G  + +A  + A
Sbjct: 724 L-YNCADQPANLFWEDLIGSILAEAGIDNA 732

HSP 3 Score: 142.9 bits (359), Expect = 1.5e-32
Identity = 105/384 (27.34%), Postives = 189/384 (49.22%), Query Frame = 1

Query: 92  TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
           TY+ +   LC +  L     + + MK      D  T+  LLD F  +   D+  +    M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354

Query: 152 EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
           E  G   ++ T+  ++ AL +    G A    F  LD   + G           LPN   
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEA----FDTLDVMRDQG----------ILPNLHT 414

Query: 212 CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEM 271
            N L+  L ++    +  ++F  + ++   + + Y Y + I  +G  G   +AL  F++M
Sbjct: 415 YNTLICGLLRVHRLDDALELFGNMESL-GVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 474

Query: 272 KEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCC 331
           K K +     +P++   N+ ++ L   G+ ++A  ++  LK  G  PD+ TY ++++   
Sbjct: 475 KTKGI-----APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 534

Query: 332 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 391
           K   +D+A  + +EM  NG  PD IV NSL+N L+KA +V EA ++F +M +  ++ +  
Sbjct: 535 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 594

Query: 392 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 451
           TYN L+ GL +NG+ +    LF  + +KG   + +T++ +   LCK   +  AL+++ +M
Sbjct: 595 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 654

Query: 452 EARGFVVDLITITSLLIAMHKQGQ 476
              G V D+ T  +++  + K GQ
Sbjct: 655 MDMGCVPDVFTYNTIIFGLVKNGQ 658

HSP 4 Score: 141.7 bits (356), Expect = 3.4e-32
Identity = 103/345 (29.86%), Postives = 164/345 (47.54%), Query Frame = 1

Query: 92   TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
            TY+ +   L  +  +     +   +K  G   D  T+  LLDA+ +SGK D   E+   M
Sbjct: 787  TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846

Query: 152  EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
                      T+N V+  L++   V  AL +++ L+   +             F P +  
Sbjct: 847  STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD-------------FSPTACT 906

Query: 212  CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYG-------YNICIYAFGCWGYLDTA 271
               L+  L K     E K++F+ +          YG       YNI I  FG  G  D A
Sbjct: 907  YGPLIDGLSKSGRLYEAKQLFEGMLD--------YGCRPNCAIYNILINGFGKAGEADAA 966

Query: 272  LSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYR 331
             +LFK M     V E   PDL TY+ ++  LC+VG+V + L  ++ELK SG  PD   Y 
Sbjct: 967  CALFKRM-----VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1026

Query: 332  IIIQGCCKSCRMDDATMIFNEMEYN-GLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQ 391
            +II G  KS R+++A ++FNEM+ + G+ PD   YNSL+  L  A  V EA ++++++ +
Sbjct: 1027 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1086

Query: 392  EDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTY 429
              +  + +T+N LI G   +G+ E  Y ++  +   G   +  TY
Sbjct: 1087 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105

HSP 5 Score: 136.0 bits (341), Expect = 1.9e-30
Identity = 98/285 (34.39%), Postives = 143/285 (50.18%), Query Frame = 1

Query: 213  NELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMK 272
            N L+  L + DM    + VF ++++       V  YN  + A+G  G +D    L+KEM 
Sbjct: 789  NLLIGGLLEADMIEIAQDVFLQVKSTGCIP-DVATYNFLLDAYGKSGKIDELFELYKEMS 848

Query: 273  EKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGS-GHEPDAFTYRIIIQGCC 332
                 + +      T+N +I  L   G V DAL ++ +L       P A TY  +I G  
Sbjct: 849  THECEANTI-----THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 908

Query: 333  KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 392
            KS R+ +A  +F  M   G  P+  +YN L+NG  KA +   AC LF +MV+E VR    
Sbjct: 909  KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 968

Query: 393  TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 452
            TY++L+D L   GR + G   F +LK+ G   D V Y++II  L K   LEEAL L  EM
Sbjct: 969  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1028

Query: 453  E-ARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNV 496
            + +RG   DL T  SL++ +   G  +   ++   I+   L PNV
Sbjct: 1029 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067

HSP 6 Score: 114.0 bits (284), Expect = 7.6e-24
Identity = 113/520 (21.73%), Postives = 213/520 (40.96%), Query Frame = 1

Query: 275 SLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGS---GHEPDAFTYRIIIQGCC 334
           S++ +S  PDL +   +   L        +   ++ + G+    H  +   Y  +++   
Sbjct: 72  SMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNY--MLEALR 131

Query: 335 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 394
              ++++   +F+ M+   +  DT  Y ++   L     + +A     KM +     + +
Sbjct: 132 VDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY 191

Query: 395 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 454
           +YN LI  L ++        ++  +  +G      TYS +++ L K R ++  + L++EM
Sbjct: 192 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 251

Query: 455 EARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKN 514
           E  G   ++ T T  +  + + G+ +    ++K + +    P+V+ + + ++     +K 
Sbjct: 252 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK- 311

Query: 515 KRKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDS----WSSSPYVNRLA 574
                  L   KE   ++ + R        I      ++ RD+DS    WS       + 
Sbjct: 312 -------LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 371

Query: 575 NLANSTSDILQPFSIRQGR--------RIQEKQDNSFDINMVNTFLSIFLAKGKLNLACK 634
           ++   T  IL     + G          +   Q    +++  NT +   L   +L+ A +
Sbjct: 372 DVVTFT--ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 431

Query: 635 LFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLG 694
           LF     +GV P  YTY   +  + K G    A   F +M       +I   N  +  L 
Sbjct: 432 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 491

Query: 695 KMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVV 754
           K GR   A  +   L + G   D V YN ++    K G +D+  KL  +M  +G  PDV+
Sbjct: 492 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 551

Query: 755 TFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
             N+LI    KA R+ +A+K    M +    P  VT  TL
Sbjct: 552 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579

HSP 7 Score: 111.3 bits (277), Expect = 4.9e-23
Identity = 101/396 (25.51%), Postives = 173/396 (43.69%), Query Frame = 1

Query: 100  LCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLE 159
            +CR G    VP +  S K + VS      + L + F +               DLG   +
Sbjct: 744  ICRDGDSILVPIIRYSCKHNNVS----GARTLFEKFTK---------------DLGVQPK 803

Query: 160  LNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVAL 219
            L TYN ++  LL  + + +A  +F           QV S       +P+    N LL A 
Sbjct: 804  LPTYNLLIGGLLEADMIEIAQDVFL----------QVKSTGC----IPDVATYNFLLDAY 863

Query: 220  RKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSE 279
             K     E  +++ ++   E  E +   +NI I      G +D AL L+ ++    +   
Sbjct: 864  GKSGKIDELFELYKEMSTHEC-EANTITHNIVISGLVKAGNVDDALDLYYDL----MSDR 923

Query: 280  SFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDA 339
             FSP  CTY  +I  L   G++ +A  ++E +   G  P+   Y I+I G  K+   D A
Sbjct: 924  DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 983

Query: 340  TMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDG 399
              +F  M   G+ PD   Y+ L++ L    +V E    F ++ +  +      YN++I+G
Sbjct: 984  CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1043

Query: 400  LFRNGRAEAGYTLFCDLK-KKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVV 459
            L ++ R E    LF ++K  +G   D  TY+ +IL L    ++EEA ++  E++  G   
Sbjct: 1044 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1101

Query: 460  DLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPN 495
            ++ T  +L+      G+ +    + + +  G   PN
Sbjct: 1104 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

HSP 8 Score: 110.2 bits (274), Expect = 1.1e-22
Identity = 99/411 (24.09%), Postives = 178/411 (43.31%), Query Frame = 1

Query: 86  FNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAAL 145
           F  S  TYS +   L +   +  V  LL  M+  G+  + +TF + +    R+GK + A 
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278

Query: 146 EILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHF 205
           EIL  M+D G   ++ TY  ++ AL    ++  A  +F K+  G +   +V        F
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338

Query: 206 LPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTAL 265
             N           R LD   +F    +K    +     V  + I + A    G    A 
Sbjct: 339 SDN-----------RDLDSVKQFWSEMEK----DGHVPDVVTFTILVDALCKAGNFGEAF 398

Query: 266 SLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRI 325
                M+++ ++     P+L TYN++I  L  V ++ DAL ++  ++  G +P A+TY +
Sbjct: 399 DTLDVMRDQGIL-----PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 458

Query: 326 IIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQED 385
            I    KS     A   F +M+  G+ P+ +  N+ L  L KA +  EA Q+F  +    
Sbjct: 459 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 518

Query: 386 VRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEAL 445
           +     TYN+++    + G  +    L  ++ + G   D +  + +I  L K   ++EA 
Sbjct: 519 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 578

Query: 446 QLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVL 497
           ++   M+       ++T  +LL  + K G+      L + + +    PN +
Sbjct: 579 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609

HSP 9 Score: 73.9 bits (180), Expect = 8.7e-12
Identity = 62/270 (22.96%), Postives = 118/270 (43.70%), Query Frame = 1

Query: 54   ISHPLLLQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLL 113
            I+H +++  L  ++ N    LD +       +F+ +  TY  +   L +SG L+E   L 
Sbjct: 856  ITHNIVISGL-VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 915

Query: 114  DSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRK 173
            + M   G   +   + +L++ F ++G+ DAA  +   M   G   +L TY+ ++  L   
Sbjct: 916  EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 975

Query: 174  NQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFD 233
             +V   L  F +L +   N              P+ +  N ++  L K     E   +F+
Sbjct: 976  GRVDEGLHYFKELKESGLN--------------PDVVCYNLIINGLGKSHRLEEALVLFN 1035

Query: 234  KLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIH 293
            +++        +Y YN  I   G  G ++ A  ++ E++   L      P++ T+N++I 
Sbjct: 1036 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL-----EPNVFTFNALIR 1095

Query: 294  VLCLVGKVKDALIVWEELKGSGHEPDAFTY 324
               L GK + A  V++ +   G  P+  TY
Sbjct: 1096 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105

BLAST of Cucsa.349850 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.5e-51
Identity = 167/639 (26.13%), Postives = 294/639 (46.01%), Query Frame = 1

Query: 154 LGTSLELNTYNSVLVALLRKNQVGL--ALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 213
           +G    +N  + +L    +  ++G    + +F  L+ GF   G+VDSA +          
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS---------- 234

Query: 214 CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEM 273
                              + D++++  S +  +  YN+CI +FG  G +D A   F E+
Sbjct: 235 -------------------LLDEMKS-SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 294

Query: 274 KEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCC 333
           +   L      PD  TY S+I VLC   ++ +A+ ++E L+ +   P  + Y  +I G  
Sbjct: 295 EANGL-----KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 354

Query: 334 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 393
            + + D+A  +       G IP  I YN +L  L K  KV EA ++F++M ++D   +  
Sbjct: 355 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLS 414

Query: 394 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 453
           TYNILID L R G+ +  + L   ++K G   +  T +I++ +LCK + L+EA  + EEM
Sbjct: 415 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 474

Query: 454 EARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWK--INMEYSIKYQ 513
           + +    D IT  SL+  + K G+ D   ++ + + + D   N + +   I   ++   +
Sbjct: 475 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 534

Query: 514 KNKRKDFSSLF----SPKEDLSEVISSRASSAAKVNIDNS-FENTEERDM--DSWSSSPY 573
           ++  K +  +     SP   L          A +     + FE  + R    D+ S S  
Sbjct: 535 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 594

Query: 574 VNRL--ANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKL 633
           ++ L  A  AN T ++   +S+++       Q    D    N  +  F   GK+N A +L
Sbjct: 595 IHGLIKAGFANETYELF--YSMKE-------QGCVLDTRAYNIVIDGFCKCGKVNKAYQL 654

Query: 634 FEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGK 693
            E     G  P   TY S++    K     +A+ +F E        ++  Y+ +I G GK
Sbjct: 655 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 714

Query: 694 MGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVT 753
           +GR D A  +LE+LM++G   ++  +N+L++AL KA  +++    F  M+     P+ VT
Sbjct: 715 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 768

Query: 754 FNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
           +  LI    K  +   A+ F + M   G  P+ ++ TT+
Sbjct: 775 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

HSP 2 Score: 199.5 bits (506), Expect = 1.4e-49
Identity = 162/642 (25.23%), Postives = 298/642 (46.42%), Query Frame = 1

Query: 162 TYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRK 221
           +YNS+L+ + R           F  LD      Q+    +   F P+   C E+++   K
Sbjct: 100 SYNSLLLVMARCRN--------FDALD------QILGEMSVAGFGPSVNTCIEMVLGCVK 159

Query: 222 LDMRVEFKKVFDKLRAIESFEF--SVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSE 281
            +   + ++ +D ++ +  F+F  +   Y   I AF    + D  L+LF++M+E      
Sbjct: 160 AN---KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG---- 219

Query: 282 SFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDA 341
            + P +  + ++I      G+V  AL + +E+K S  + D   Y + I    K  ++D A
Sbjct: 220 -YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 279

Query: 342 TMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDG 401
              F+E+E NGL PD + Y S++  L KA ++ EA ++F+ + +       + YN +I G
Sbjct: 280 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 339

Query: 402 LFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVD 461
               G+ +  Y+L    + KG I   + Y+ I+  L K   ++EAL++ EEM+ +    +
Sbjct: 340 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPN 399

Query: 462 LITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKN-------K 521
           L T   L+  + + G+ D    L   +++  L PNV    I ++   K QK        +
Sbjct: 400 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 459

Query: 522 RKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDS---WSSSPYVNRLANL 581
             D+  + +P E       S      KV   +      E+ +DS    +S  Y + + N 
Sbjct: 460 EMDYK-VCTPDEI---TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 519

Query: 582 ANSTSDILQPFSIRQGRRIQE---KQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSD 641
            N             G +I +    Q+ S D+ ++NT++      G+      +FE    
Sbjct: 520 FNHGRK-------EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 579

Query: 642 MGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADL 701
               P   +Y+ ++   +K G+ ++ + +F  M E  C  D   YN++I G  K G+ + 
Sbjct: 580 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 639

Query: 702 ASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIE 761
           A  +LE++  +G    +V Y ++I+ L K  R+D+   LF + ++  I  +VV +++LI+
Sbjct: 640 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 699

Query: 762 VHSKAGRLKDAYKFLKMMLDSGCSPNHVT-DTTLDFLGREME 788
              K GR+ +AY  L+ ++  G +PN  T ++ LD L +  E
Sbjct: 700 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707

HSP 3 Score: 199.1 bits (505), Expect = 1.8e-49
Identity = 170/696 (24.43%), Postives = 306/696 (43.97%), Query Frame = 1

Query: 86  FNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAAL 145
           F  + S Y+ +        +   +  L   M+  G     H F  L+  F + G+ D+AL
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223

Query: 146 EILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHF 205
            +LD M+      ++  YN  +                    D F   G+VD A   FH 
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCI--------------------DSFGKVGKVDMAWKFFHE 283

Query: 206 LP-NSLACNEL--------LVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFG 265
           +  N L  +E+        L    +LD  VE  +  +K R +       Y YN  I  +G
Sbjct: 284 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC----TYAYNTMIMGYG 343

Query: 266 CWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGH 325
             G  D A SL +  + K  +     P +  YN I+  L  +GKV +AL V+EE+K    
Sbjct: 344 SAGKFDEAYSLLERQRAKGSI-----PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA- 403

Query: 326 EPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQ 385
            P+  TY I+I   C++ ++D A  + + M+  GL P+    N +++ L K++K+ EAC 
Sbjct: 404 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 463

Query: 386 LFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLC 445
           +F++M  +       T+  LIDGL + GR +  Y ++  +       +++ Y+ +I    
Sbjct: 464 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 523

Query: 446 KERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVL 505
                E+  ++ ++M  +    DL  + + +  M K G+ +    + + I+    VP+  
Sbjct: 524 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 583

Query: 506 KWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASS--------AAKVNIDNSFEN 565
            + I +   IK       +   LF   ++   V+ +RA +          KVN   +++ 
Sbjct: 584 SYSILIHGLIK--AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN--KAYQL 643

Query: 566 TEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMV--NTFLS 625
            EE  M +    P V    ++ +  + I +          +E +    ++N+V  ++ + 
Sbjct: 644 LEE--MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM--LFEEAKSKRIELNVVIYSSLID 703

Query: 626 IFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPA 685
            F   G+++ A  + E     G+ P  YT+NS+L + VK    ++A   F  M E  C  
Sbjct: 704 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 763

Query: 686 DIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLF 745
           +  TY ++I GL K+ + + A    +++ +QG     + Y T+I+ L KAG + +   LF
Sbjct: 764 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 821

Query: 746 GQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLK 763
            + + +G  PD   +N +IE  S   R  DA+   +
Sbjct: 824 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

BLAST of Cucsa.349850 vs. Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-46
Identity = 124/502 (24.70%), Postives = 233/502 (46.41%), Query Frame = 1

Query: 274 KSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKS 333
           K +       D+ T   +I+  C   K+  A  V       G+EPD  T+  ++ G C  
Sbjct: 94  KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153

Query: 334 CRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTY 393
            R+ +A  + + M      PD +  ++L+NGL    +V+EA  L D+MV+   +    TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 394 NILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEA 453
             +++ L ++G +     LF  ++++      V YSI+I  LCK+   ++AL L  EME 
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273

Query: 454 RGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKR 513
           +G   D++T +SL+  +   G+WD   ++++ +   +++P+V+ +   ++  +K  K   
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK--- 333

Query: 514 KDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDSWSSSPYVNRLANLANST 573
                L   KE  +E+I+   +                   D+ + +  ++      N  
Sbjct: 334 -----LLEAKELYNEMITRGIAP------------------DTITYNSLIDGFCK-ENCL 393

Query: 574 SDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVK 633
            +  Q F +   +  +       DI   +  ++ +    +++   +LF   S  G+ P  
Sbjct: 394 HEANQMFDLMVSKGCEP------DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 453

Query: 634 YTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEK 693
            TYN+++  F + G  + A  +F EM     P  + TY +++ GL   G  + A  + EK
Sbjct: 454 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 513

Query: 694 LMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGR 753
           + +    L I +YN +I+ +  A ++DD   LF  + + G+ PDVVT+N +I    K G 
Sbjct: 514 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 562

Query: 754 LKDAYKFLKMMLDSGCSPNHVT 776
           L +A    + M + GC+P+  T
Sbjct: 574 LSEADMLFRKMKEDGCTPDDFT 562

HSP 2 Score: 151.8 bits (382), Expect = 3.3e-35
Identity = 111/388 (28.61%), Postives = 186/388 (47.94%), Query Frame = 1

Query: 88  HSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEI 147
           H   T + + +  CR   L     +L    + G   D+ TF  L++ F   G+   A+ +
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162

Query: 148 LDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLP 207
           +D M ++    +L T ++++  L  K +V  AL +  ++++              + F P
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE--------------YGFQP 222

Query: 208 NSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSL 267
           + +    +L  L K         +F K+    + + SV  Y+I I +    G  D ALSL
Sbjct: 223 DEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASVVQYSIVIDSLCKDGSFDDALSL 282

Query: 268 FKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIII 327
           F EM+ K + +     D+ TY+S+I  LC  GK  D   +  E+ G    PD  T+  +I
Sbjct: 283 FNEMEMKGIKA-----DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 342

Query: 328 QGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVR 387
               K  ++ +A  ++NEM   G+ PDTI YNSL++G  K   + EA Q+FD MV +   
Sbjct: 343 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 402

Query: 388 ASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQL 447
               TY+ILI+   +  R + G  LF ++  KG I + +TY+ ++L  C+   L  A +L
Sbjct: 403 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 462

Query: 448 VEEMEARGFVVDLITITSLLIAMHKQGQ 476
            +EM +RG    ++T   LL  +   G+
Sbjct: 463 FQEMVSRGVPPSVVTYGILLDGLCDNGE 470

HSP 3 Score: 149.8 bits (377), Expect = 1.3e-34
Identity = 142/567 (25.04%), Postives = 240/567 (42.33%), Query Frame = 1

Query: 128 FKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLL 187
           F  L  A  R+ +YD  L     ME  G   ++ T   ++    RK ++  A S+  +  
Sbjct: 73  FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR-- 132

Query: 188 DGFNNGGQVDSAATTFHFLPNSLACN-ELLVALRKLDMRVEFKKVFDKLRAIESFEFSVY 247
             +  G + D+   TF  L N       +  A+  +D  VE K+  D +        S  
Sbjct: 133 -AWKLGYEPDTI--TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV------STL 192

Query: 248 GYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALI 307
              +C+      G +  AL L   M     V   F PD  TY  +++ LC  G    AL 
Sbjct: 193 INGLCLK-----GRVSEALVLIDRM-----VEYGFQPDEVTYGPVLNRLCKSGNSALALD 252

Query: 308 VWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLF 367
           ++ +++    +     Y I+I   CK    DDA  +FNEME  G+  D + Y+SL+ GL 
Sbjct: 253 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 312

Query: 368 KARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAV 427
              K  +  ++  +M+  ++     T++ LID   + G+      L+ ++  +G   D +
Sbjct: 313 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 372

Query: 428 TYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHI 487
           TY+ +I   CKE  L EA Q+ + M ++G   D++T + L+ +  K  + D   RL + I
Sbjct: 373 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 432

Query: 488 REGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAK---VNID 547
               L+PN + +   +   + + ++       L + KE   E++S     +     + +D
Sbjct: 433 SSKGLIPNTITYNTLV---LGFCQS-----GKLNAAKELFQEMVSRGVPPSVVTYGILLD 492

Query: 548 NSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNT 607
              +N E                    N   +I +           +K   +  I + N 
Sbjct: 493 GLCDNGE-------------------LNKALEIFEKM---------QKSRMTLGIGIYNI 552

Query: 608 FLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENV 667
            +       K++ A  LF   SD GV P   TYN M+    KKG   +A  +F +M E+ 
Sbjct: 553 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 580

Query: 668 CPADIATYNVIIQGLGKMGRADLASSV 691
           C  D  TYN++I+    +G + L SSV
Sbjct: 613 CTPDDFTYNILIR--AHLGGSGLISSV 580

HSP 4 Score: 123.6 bits (309), Expect = 9.6e-27
Identity = 99/362 (27.35%), Postives = 161/362 (44.48%), Query Frame = 1

Query: 92  TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
           TYS +   LC  G   +   +L  M    +  D  TF  L+D F++ GK   A E+ + M
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341

Query: 152 EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
              G + +  TYNS++    ++N +  A  +F  ++   + G + D    T+  L NS  
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV---SKGCEPD--IVTYSILINSYC 401

Query: 212 CNELLVALRKLDMRVEFKKVFDKLRAIESFEF-----SVYGYNICIYAFGCWGYLDTALS 271
                          + K+V D +R            +   YN  +  F   G L+ A  
Sbjct: 402 ---------------KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 461

Query: 272 LFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRII 331
           LF+EM     VS    P + TY  ++  LC  G++  AL ++E+++ S        Y II
Sbjct: 462 LFQEM-----VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 521

Query: 332 IQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDV 391
           I G C + ++DDA  +F  +   G+ PD + YN ++ GL K   ++EA  LF KM ++  
Sbjct: 522 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 581

Query: 392 RASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQ 449
               +TYNILI          +   L  ++K  G   D+ T  ++I  L   RL +  L 
Sbjct: 582 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLD 618

HSP 5 Score: 112.1 bits (279), Expect = 2.9e-23
Identity = 104/472 (22.03%), Postives = 197/472 (41.74%), Query Frame = 1

Query: 300 KVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYN 359
           KV DA+ ++E +  S   P    +  +     ++ + D        ME NG+  D     
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 360 SLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKK 419
            ++N   + +K+  A  +  +  +        T++ L++G    GR      L   + + 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 420 GQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGL 479
            Q  D VT S +I  LC +  + EAL L++ M   GF  D +T   +L  + K G     
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 480 ERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKE--DLSEVISSRASSA 539
             L + + E ++  +V+++ I ++   K       D  SLF+  E   +   + + +S  
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCK--DGSFDDALSLFNEMEMKGIKADVVTYSSLI 289

Query: 540 AKVNIDNSFENTEE--RDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNS 599
             +  D  +++  +  R+M   +  P V         T   L    +++G+ ++ K+   
Sbjct: 290 GGLCNDGKWDDGAKMLREMIGRNIIPDV--------VTFSALIDVFVKEGKLLEAKE--- 349

Query: 600 FDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGI 659
                                   L+      G+ P   TYNS++  F K+   H+A  +
Sbjct: 350 ------------------------LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 409

Query: 660 FNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGK 719
           F+ M    C  DI TY+++I    K  R D    +  ++  +G   + + YNTL+    +
Sbjct: 410 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 469

Query: 720 AGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDS 768
           +G+++   +LF +M + G+ P VVT+  L++     G L  A +  + M  S
Sbjct: 470 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

HSP 6 Score: 39.7 bits (91), Expect = 1.8e-01
Identity = 34/172 (19.77%), Postives = 71/172 (41.28%), Query Frame = 1

Query: 629 VNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLAS 688
           +   K +Y   L + +     + A  +F  M ++        +N +   + +  + DL  
Sbjct: 31  ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 90

Query: 689 SVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVH 748
              + +   G   D+     +IN   +  ++     + G+    G  PD +TF+TL+   
Sbjct: 91  GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150

Query: 749 SKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREMEKARYEKASIIRDK 801
              GR+ +A   +  M++    P+ VT +TL  +     K R  +A ++ D+
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTL--INGLCLKGRVSEALVLIDR 200

BLAST of Cucsa.349850 vs. Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.4e-46
Identity = 136/518 (26.25%), Postives = 245/518 (47.30%), Query Frame = 1

Query: 262 DTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAF 321
           D A++LF+EM     +     P L  ++     +    +    L   ++L+ +G   + +
Sbjct: 70  DDAIALFQEM-----IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 129

Query: 322 TYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKM 381
           T  I+I   C+ C+   A  +  ++   G  PDT  +N+L+ GLF   KV+EA  L D+M
Sbjct: 130 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 189

Query: 382 VQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLL 441
           V+   +    TYN +++G+ R+G       L   ++++    D  TYS II  LC++  +
Sbjct: 190 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 249

Query: 442 EEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKIN 501
           + A+ L +EME +G    ++T  SL+  + K G+W+    L+K +   ++VPNV+ + + 
Sbjct: 250 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 309

Query: 502 MEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDSWSSSP 561
           ++  +K  + K ++ + L+  KE ++  IS                 T    MD +    
Sbjct: 310 LDVFVK--EGKLQEANELY--KEMITRGISPNII-------------TYNTLMDGYCMQ- 369

Query: 562 YVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKLF 621
             NRL+  AN+  D++             +   S DI    + +  +    +++   K+F
Sbjct: 370 --NRLSE-ANNMLDLM------------VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 429

Query: 622 EIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKM 681
              S  G+     TY+ ++  F + G    A  +F EM  +    D+ TY +++ GL   
Sbjct: 430 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 489

Query: 682 GRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTF 741
           G+ + A  + E L +    L IVMY T+I  + K G+++D   LF  +   G+ P+V+T+
Sbjct: 490 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 549

Query: 742 NTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
             +I    K G L +A   L+ M + G +PN  T  TL
Sbjct: 550 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549

HSP 2 Score: 158.3 bits (399), Expect = 3.5e-37
Identity = 106/396 (26.77%), Postives = 189/396 (47.73%), Query Frame = 1

Query: 92  TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
           TY+ I + +CRSG       LL  M+   V  D  T+  ++D+  R G  DAA+ +   M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 152 EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
           E  G    + TYNS++  L +  +              +N+G  +     +   +PN + 
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGK--------------WNDGALLLKDMVSREIVPNVIT 314

Query: 212 CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEM 271
            N LL    K     E  +++ ++        ++  YN  +  +     L  A ++   M
Sbjct: 315 FNVLLDVFVKEGKLQEANELYKEM-ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 374

Query: 272 KEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCC 331
                V    SPD+ T+ S+I   C+V +V D + V+  +   G   +A TY I++QG C
Sbjct: 375 -----VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 434

Query: 332 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 391
           +S ++  A  +F EM  +G++PD + Y  LL+GL    K+ +A ++F+ + +  +     
Sbjct: 435 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 494

Query: 392 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 451
            Y  +I+G+ + G+ E  + LFC L  KG   + +TY+++I  LCK+  L EA  L+ +M
Sbjct: 495 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 554

Query: 452 EARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIR 488
           E  G   +  T  +L+ A  + G      +L++ ++
Sbjct: 555 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570

HSP 3 Score: 142.5 bits (358), Expect = 2.0e-32
Identity = 96/403 (23.82%), Postives = 199/403 (49.38%), Query Frame = 1

Query: 93  YSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHME 152
           +S+ F  + R+   + V      ++ +G++ + +T  ++++ F R  K   A  +L  + 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 153 DLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA- 212
            LG   +  T+N+++  L  + +V  A+ +  ++++   NG Q D    T++ + N +  
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE---NGCQPD--VVTYNSIVNGICR 210

Query: 213 ---CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLF 272
               +  L  LRK++ R              + +  V+ Y+  I +    G +D A+SLF
Sbjct: 211 SGDTSLALDLLRKMEER--------------NVKADVFTYSTIIDSLCRDGCIDAAISLF 270

Query: 273 KEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQ 332
           KEM+ K + S      + TYNS++  LC  GK  D  ++ +++      P+  T+ +++ 
Sbjct: 271 KEMETKGIKSS-----VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 330

Query: 333 GCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRA 392
              K  ++ +A  ++ EM   G+ P+ I YN+L++G     +++EA  + D MV+     
Sbjct: 331 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 390

Query: 393 SPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLV 452
              T+  LI G     R + G  +F ++ K+G + +AVTYSI++   C+   ++ A +L 
Sbjct: 391 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 450

Query: 453 EEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDL 492
           +EM + G + D++T   LL  +   G+ +    + + +++  +
Sbjct: 451 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

HSP 4 Score: 139.4 bits (350), Expect = 1.7e-31
Identity = 105/430 (24.42%), Postives = 199/430 (46.28%), Query Frame = 1

Query: 74  LDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLD 133
           LDF K   L     H+  T + + +  CR         +L  + + G   D+ TF  L+ 
Sbjct: 108 LDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 167

Query: 134 AFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNG 193
                GK   A+ ++D M + G   ++ TYNS++  + R     LAL +  K+ +     
Sbjct: 168 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER---- 227

Query: 194 GQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIY 253
             V +   T+  + +SL  +  + A   L   +E K +          + SV  YN  + 
Sbjct: 228 -NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI----------KSSVVTYNSLVR 287

Query: 254 AF---GCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEE 313
                G W   D AL L      K +VS    P++ T+N ++ V    GK+++A  +++E
Sbjct: 288 GLCKAGKWN--DGALLL------KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 347

Query: 314 LKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARK 373
           +   G  P+  TY  ++ G C   R+ +A  + + M  N   PD + + SL+ G    ++
Sbjct: 348 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 407

Query: 374 VTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSI 433
           V +  ++F  + +  + A+  TY+IL+ G  ++G+ +    LF ++   G + D +TY I
Sbjct: 408 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 467

Query: 434 IILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGD 493
           ++  LC    LE+AL++ E+++     + ++  T+++  M K G+ +    L   +    
Sbjct: 468 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 513

Query: 494 LVPNVLKWKI 501
           + PNV+ + +
Sbjct: 528 VKPNVMTYTV 513

HSP 5 Score: 111.7 bits (278), Expect = 3.8e-23
Identity = 115/535 (21.50%), Postives = 233/535 (43.55%), Query Frame = 1

Query: 128 FKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLL 187
           F     A  R+ +++  L+    +E  G +  + T N ++    R  +   A S+  K++
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 188 DGFNNGGQVDSAATTFHFLPNSLACN-ELLVALRKLDMRVEFKKVFDKLRAIESFEFSVY 247
                G + D+  TTF+ L   L    ++  A+  +D  VE              +  V 
Sbjct: 151 ---KLGYEPDT--TTFNTLIKGLFLEGKVSEAVVLVDRMVE-----------NGCQPDVV 210

Query: 248 GYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALI 307
            YN  +      G    AL L ++M+E+++ ++ F     TY++II  LC  G +  A+ 
Sbjct: 211 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF-----TYSTIIDSLCRDGCIDAAIS 270

Query: 308 VWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLF 367
           +++E++  G +    TY  +++G CK+ + +D  ++  +M    ++P+ I +N LL+   
Sbjct: 271 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 330

Query: 368 KARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAV 427
           K  K+ EA +L+ +M+   +  +  TYN L+DG     R      +   + +     D V
Sbjct: 331 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 390

Query: 428 TYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHI 487
           T++ +I   C  + +++ +++   +  RG V + +T + L+    + G+    E L + +
Sbjct: 391 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 450

Query: 488 REGDLVPNVLKWKINMEYSIKYQKNKR--KDFSSLFSPKEDLSEVISSRASSAAKVNIDN 547
               ++P+V+ + I ++      K ++  + F  L   K DL  V+ +         I+ 
Sbjct: 451 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI-------IEG 510

Query: 548 SFENTEERD-MDSWSSSPYVNRLANLANST---SDILQPFSIRQGR---RIQEKQDNSFD 607
             +  +  D  + + S P      N+   T   S + +  S+ +     R  E+  N+ +
Sbjct: 511 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 570

Query: 608 INMVNTFLSIFLAKGKLNLACKLFEIFSDMG----VNPVKYTYNSMLSSFVKKGY 649
               NT +   L  G L  + KL E     G     + +K   + +LS  + K +
Sbjct: 571 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSF 597

HSP 6 Score: 63.5 bits (153), Expect = 1.2e-08
Identity = 58/239 (24.27%), Postives = 109/239 (45.61%), Query Frame = 1

Query: 544 NSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNT 603
           +SF ++ ERD  S S+     R   L +   DI +  +I   + +   +     ++    
Sbjct: 36  SSFFSSCERDFSSISNGNVCFR-ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRF 95

Query: 604 FLSIFLAKGKLNLA---CKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 663
           F +I   K + NL    CK  E+    G+    YT N M++ F +      A+ +  ++ 
Sbjct: 96  FSAIARTK-QFNLVLDFCKQLEL---NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 155

Query: 664 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 723
           +     D  T+N +I+GL   G+   A  ++++++E G   D+V YN+++N + ++G   
Sbjct: 156 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 215

Query: 724 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
               L  +M    +  DV T++T+I+   + G +  A    K M   G   + VT  +L
Sbjct: 216 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269

HSP 7 Score: 45.4 bits (106), Expect = 3.3e-03
Identity = 24/80 (30.00%), Postives = 43/80 (53.75%), Query Frame = 1

Query: 92  TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
           TY+ +   LC+ G L E   LL  M+ DG + +  T+  L+ A +R G   A+ ++++ M
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569

Query: 152 EDLGTSLELNTYNSVLVALL 172
           +  G S + ++   V+  LL
Sbjct: 570 KSCGFSADASSIKMVIDMLL 589

BLAST of Cucsa.349850 vs. TrEMBL
Match: A0A0A0KFG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G101450 PE=4 SV=1)

HSP 1 Score: 1605.1 bits (4155), Expect = 0.0e+00
Identity = 803/803 (100.00%), Postives = 803/803 (100.00%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60
           MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL
Sbjct: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60

Query: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120
           QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG
Sbjct: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120

Query: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180
           VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180

Query: 181 SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES 240
           SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES
Sbjct: 181 SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES 240

Query: 241 FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 300
           FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK
Sbjct: 241 FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 300

Query: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 360
           VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 360

Query: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420
           LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420

Query: 421 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 480
           QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE
Sbjct: 421 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 480

Query: 481 RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV 540
           RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV 540

Query: 541 NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM 600
           NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM
Sbjct: 541 NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM 600

Query: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
           VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660

Query: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720
           ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720

Query: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780
           DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD
Sbjct: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780

Query: 781 FLGREMEKARYEKASIIRDKNSS 804
           FLGREMEKARYEKASIIRDKNSS
Sbjct: 781 FLGREMEKARYEKASIIRDKNSS 803

BLAST of Cucsa.349850 vs. TrEMBL
Match: A0A061DRT6_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_005001 PE=4 SV=1)

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 553/812 (68.10%), Postives = 648/812 (79.80%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60
           MR+GRT    LS  S     S   HL ++LL+AS+TKTLSESGTR L  +S+PIS PL++
Sbjct: 1   MRNGRTG---LSSVSSPLLKSPSIHLGNILLIASLTKTLSESGTRNLDPNSIPISEPLVI 60

Query: 61  QILHSRSLNPSHKLDFFKWC-SLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRD 120
           QIL   SL PS KLDFF WC S+ PNF HS  TYS IF  LCRSG++ EVP LL +MK D
Sbjct: 61  QILRKHSLEPSKKLDFFNWCRSVKPNFKHSAVTYSHIFRTLCRSGFVEEVPNLLFAMKED 120

Query: 121 GVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLA 180
           GV VDS TFK LLDAFIRSGK+D+ALEILD ME+LG  L L  Y+SVLVAL+RK+QVGLA
Sbjct: 121 GVLVDSDTFKFLLDAFIRSGKFDSALEILDFMEELGAGLNLRVYDSVLVALIRKDQVGLA 180

Query: 181 LSIFFKLLDGFN---NGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLR 240
           LS+FFKLL+  N   +G  VDS+      LP S+A NELLVALRK  MR EFK+VFD LR
Sbjct: 181 LSLFFKLLEACNGNDDGNSVDSS------LPGSIAINELLVALRKAHMRREFKQVFDILR 240

Query: 241 AIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLC 300
               FEF   GYNICI++FGCWG L  +L LFKEMKEK     SF PDLCTYNS+I VLC
Sbjct: 241 EKREFEFDTCGYNICIHSFGCWGDLGASLKLFKEMKEKEKSFGSFGPDLCTYNSLIDVLC 300

Query: 301 LVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTI 360
           LVGKVKDAL+VWEELK SGHEPDAFTYRI+IQGC KS RMDDAT IF+EM+YNG   DT+
Sbjct: 301 LVGKVKDALVVWEELKVSGHEPDAFTYRILIQGCSKSYRMDDATKIFSEMQYNGFAMDTV 360

Query: 361 VYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDL 420
           VYNSLLNGLFKARKV EACQ F+KMVQ+ VRAS WTYNILIDGLFRNGRAEA YTLFCDL
Sbjct: 361 VYNSLLNGLFKARKVMEACQFFEKMVQDGVRASCWTYNILIDGLFRNGRAEAAYTLFCDL 420

Query: 421 KKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQW 480
           KKKGQ VD +TYSI++LQLC+E  LE AL+LVEEMEARGF+VDL+TITSLLI  HKQG+W
Sbjct: 421 KKKGQFVDGITYSIVVLQLCREGQLEGALRLVEEMEARGFIVDLVTITSLLIGFHKQGRW 480

Query: 481 DGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASS 540
           D  ERLMKHIR+G+LVPNVLKWK NME S+K     RKD++ LF  K D  E+++   S 
Sbjct: 481 DWTERLMKHIRDGNLVPNVLKWKANMEASMKNPPKNRKDYTPLFPSKGDFREIMNLLGSV 540

Query: 541 AAKVNIDNSFENTEERDM-------DSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQ 600
              +  +   E+ +E+D        D WSSSPY+++LAN   ST    Q FS+ +G+R+Q
Sbjct: 541 GQAMGTNLDSEDCDEKDQEKPSIDTDQWSSSPYMDQLANQGKSTERSSQLFSLIRGQRVQ 600

Query: 601 EKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYF 660
           EK   SFD++MVNTFLSIFLAKGKL+LACKLFE+F+DMGV+PV YTYNS++SSFVKKGYF
Sbjct: 601 EKGIGSFDVDMVNTFLSIFLAKGKLSLACKLFEVFTDMGVDPVSYTYNSIMSSFVKKGYF 660

Query: 661 HQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTL 720
           ++AWG+ NEM E VCPADIATYN+IIQGLGKMGRAD+ASSVL+KLM+QGGYLD+VMYNTL
Sbjct: 661 NEAWGVLNEMDEKVCPADIATYNLIIQGLGKMGRADIASSVLDKLMKQGGYLDVVMYNTL 720

Query: 721 INALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGC 780
           +NALGKAGR+D+ +KLF QMR SGINPDV+T+NTLIEVH+KAG+L+DAYKFLKMMLD+GC
Sbjct: 721 VNALGKAGRVDEASKLFEQMRTSGINPDVITYNTLIEVHTKAGQLQDAYKFLKMMLDAGC 780

Query: 781 SPNHVTDTTLDFLGREMEKARYEKASIIRDKN 802
           SPNHVTDT LD LG+E+EK R +KAS++R  N
Sbjct: 781 SPNHVTDTILDNLGKEIEKMRLQKASMVRTDN 803

BLAST of Cucsa.349850 vs. TrEMBL
Match: B9GRT7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s18390g PE=4 SV=2)

HSP 1 Score: 1057.4 bits (2733), Expect = 8.9e-306
Identity = 529/779 (67.91%), Postives = 640/779 (82.16%), Query Frame = 1

Query: 26  LSHLLLLASITKTLSESGTRTLQHHSLPISHPLLLQILHSRSLNPSHKLDFFKWCSLAPN 85
           + ++LL+A +TKTLSESGTR+L   S+P+S  L+LQIL   SL+ S K++FFKWCS+   
Sbjct: 1   MGNILLVAYLTKTLSESGTRSLDPDSIPLSESLVLQILRRNSLDSSKKMEFFKWCSVRHI 60

Query: 86  FNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAAL 145
           + HS STYSQ+F  LCRSGYL EVP LL+SMK DGV V S TFK+LLDAFIRSGK+D+AL
Sbjct: 61  YKHSVSTYSQMFSTLCRSGYLDEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSAL 120

Query: 146 EILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHF 205
           +ILDHME+LG++   + Y+S++VAL +KNQVGLALSI FKLL+  ++G + ++   +   
Sbjct: 121 DILDHMEELGSNPNPHMYDSIIVALAKKNQVGLALSIMFKLLEA-SDGNEENAVGVS--- 180

Query: 206 LPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTAL 265
           LP S+ACN LLVALR  +M+VEFK VF KLR    FE + +GYNICI+AFGCWG L T+L
Sbjct: 181 LPGSVACNALLVALRNGEMKVEFKTVFAKLRGKGGFELNTWGYNICIHAFGCWGDLTTSL 240

Query: 266 SLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRI 325
            LFKEMKEKSL S S  PDLCTYNS+IHVLCL GKVKDA+IV+EELK SGHEPDAFTYRI
Sbjct: 241 RLFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRI 300

Query: 326 IIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQED 385
           +IQGCCKS +M+DAT IF+EM+YNG +PDT+VYNSLL+G+FKARKV EACQLF+KMVQ+ 
Sbjct: 301 LIQGCCKSYQMEDATKIFSEMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQDG 360

Query: 386 VRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEAL 445
           VRAS WTYNILIDGL +NGRAEAGY LFC LKKKGQ VDAVTYSI++L LC++  LEEAL
Sbjct: 361 VRASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQFVDAVTYSIVVLLLCRKGHLEEAL 420

Query: 446 QLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYS 505
            LVEEME RGFVVDLITITSLLIA HKQG+WD  ERLMKHIR+ +L+PNVLKW+ +ME S
Sbjct: 421 HLVEEMEERGFVVDLITITSLLIAFHKQGRWDCTERLMKHIRDVNLLPNVLKWRADMEAS 480

Query: 506 IKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVNID-NSFENTEERDMDSWSSSPYVN 565
           +K     R+D++ +F     L E++SS +S  ++ +      E +   D D WSSSPY++
Sbjct: 481 LKNPPRSREDYTPMFPSTGGLQEIMSSISSPKSRSDDGATEDEKSSSADTDQWSSSPYMD 540

Query: 566 RLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIF 625
            LAN A ST    Q FS+ +G+R+Q K   SFDI+MVNTFLSIFLAKGKL+LACKLFEIF
Sbjct: 541 HLANQAKSTDLSSQLFSLARGQRVQAKGAGSFDIDMVNTFLSIFLAKGKLSLACKLFEIF 600

Query: 626 SDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRA 685
           +DMGV+PV YTYNS++SSFVKKGYF++AW +FNEMGE VCP DIATYN++IQGLGKMGRA
Sbjct: 601 TDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCPPDIATYNLVIQGLGKMGRA 660

Query: 686 DLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTL 745
           DLASSVL+KLM+QGGYLDIVMYNTLI+ALGKAGR+D+ N LF QM+ SG+NPDVVT+N +
Sbjct: 661 DLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLFEQMKISGLNPDVVTYNIM 720

Query: 746 IEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREMEKARYEKASIIRDKNSS 804
           IEVHSK GRLKDAYKFLKMMLD+GC PNHVTDTTLDFL +E+EK RY+KASI+R K+ S
Sbjct: 721 IEVHSKTGRLKDAYKFLKMMLDAGCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDDS 775

BLAST of Cucsa.349850 vs. TrEMBL
Match: U5GLR6_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0002s18370g PE=4 SV=1)

HSP 1 Score: 1055.0 bits (2727), Expect = 4.4e-305
Identity = 528/779 (67.78%), Postives = 640/779 (82.16%), Query Frame = 1

Query: 26  LSHLLLLASITKTLSESGTRTLQHHSLPISHPLLLQILHSRSLNPSHKLDFFKWCSLAPN 85
           + ++LL+A +TKTLSESGTR+L   S+P+S  L+LQIL   SL+ S K++FFKWCS+   
Sbjct: 1   MGNILLVAYLTKTLSESGTRSLDPDSIPLSEYLVLQILRRNSLDSSKKMEFFKWCSVRHI 60

Query: 86  FNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAAL 145
           + HS STYSQ+F  LCRSGYL EVP LL+SMK DGV V S TFK+LLDAFIRSGK+D+AL
Sbjct: 61  YKHSVSTYSQMFSTLCRSGYLEEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSAL 120

Query: 146 EILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHF 205
           +ILDHME+LG++   + Y+S++VAL +KNQVGLALSI FKLL+  ++G + ++   +   
Sbjct: 121 DILDHMEELGSNPNPHMYDSIIVALAKKNQVGLALSIMFKLLEA-SDGNEENAVRVS--- 180

Query: 206 LPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTAL 265
           LP S+ACN LLVALR  +M+VEFK VF KLR    F+ + +GYNICI+AFGCWG L T+L
Sbjct: 181 LPGSVACNALLVALRNGEMKVEFKTVFAKLRGKVGFKLNTWGYNICIHAFGCWGDLTTSL 240

Query: 266 SLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRI 325
            LFKEMKEKSL S S  PDLCTYNS+IHVLCL GKVKDA+IV+EELK SGHEPDAFTYRI
Sbjct: 241 RLFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRI 300

Query: 326 IIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQED 385
           +IQGCCKS +M+DAT IF+EM+YNG +PDT+VYNSLL+G+FKARKV EACQLF+KMVQ+ 
Sbjct: 301 LIQGCCKSYQMEDATKIFSEMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQDG 360

Query: 386 VRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEAL 445
           VRAS WTYNILIDGL +NGRAEAGY LFC LKKKGQ VDAVTYSI++L LC++  LEEAL
Sbjct: 361 VRASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQFVDAVTYSIVVLLLCRKGHLEEAL 420

Query: 446 QLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYS 505
            LVEEME RGFVVDLITITSLLIA HKQG+WD  ERLMKHIR+ +L+PNVLKW+ +ME S
Sbjct: 421 HLVEEMEERGFVVDLITITSLLIAFHKQGRWDCTERLMKHIRDVNLLPNVLKWRADMEAS 480

Query: 506 IKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVNID-NSFENTEERDMDSWSSSPYVN 565
           +K     R+D++ +F     L E++SS +S  ++ +      E +   D D WSSSPY++
Sbjct: 481 LKNPPRSREDYTPMFPSTGGLQEIMSSISSPKSRSDDGATEDEKSSSADTDQWSSSPYMD 540

Query: 566 RLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIF 625
            LAN A ST    Q FS+ +G+R+Q K   SFDI+MVNTFLSIFLAKGKL+LACKLFEIF
Sbjct: 541 HLANQAKSTDLSSQLFSLARGQRVQAKGAGSFDIDMVNTFLSIFLAKGKLSLACKLFEIF 600

Query: 626 SDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRA 685
           +DMGV+PV YTYNS++SSFVKKGYF++AW +FNEMGE VCP DIATYN++IQGLGKMGRA
Sbjct: 601 TDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCPPDIATYNLVIQGLGKMGRA 660

Query: 686 DLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTL 745
           DLASSVL+KLM+QGGYLDIVMYNTLI+ALGKAGR+D+ N LF QM+ SG+NPDVVT+N +
Sbjct: 661 DLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLFEQMKISGLNPDVVTYNIM 720

Query: 746 IEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREMEKARYEKASIIRDKNSS 804
           IEVHSK GRLKDAYKFLKMMLD+GC PNHVTDTTLDFL +E+EK RY+KASI+R K+ S
Sbjct: 721 IEVHSKTGRLKDAYKFLKMMLDAGCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDDS 775

BLAST of Cucsa.349850 vs. TrEMBL
Match: F6HG95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03410 PE=4 SV=1)

HSP 1 Score: 1055.0 bits (2727), Expect = 4.4e-305
Identity = 532/800 (66.50%), Postives = 644/800 (80.50%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60
           MRHGRT        S S  A     L  +LL+ASI+KTLSE GTR+    S+PIS  L++
Sbjct: 1   MRHGRTL-------SSSAAAGAGVKLGDMLLVASISKTLSERGTRSPDLESIPISESLVV 60

Query: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSG--YLHEVPPLLDSMKR 120
           QIL   S++   K++FF+WCS   N+ HS   YS IF I+CR+G  +L +VP L+ SMK 
Sbjct: 61  QILGRNSIDVFRKVEFFRWCSFRHNYKHSVGAYSHIFRIVCRAGAEFLDQVPLLMSSMKD 120

Query: 121 DGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGL 180
           DGV V   TFK+LLD+ IR+GK+D+ALEILDH+E+LGT L    Y+SVLVAL+RKNQ+GL
Sbjct: 121 DGVVVGQETFKLLLDSLIRAGKFDSALEILDHIEELGTGLNSYVYDSVLVALIRKNQLGL 180

Query: 181 ALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAI 240
           AL +FFKLL G    G V         +P S ACN+LLVALRK DM++EF+ VF+KLRA 
Sbjct: 181 ALPLFFKLLGGDEGQGGVP--------VPESNACNQLLVALRKADMKIEFRNVFEKLRAK 240

Query: 241 ESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLV 300
           + F+    GYNICI+AFGCWG L TAL+LFKEMK+KSL S SF PDLCTYNS+I VLCLV
Sbjct: 241 KDFDLDTQGYNICIHAFGCWGDLGTALNLFKEMKDKSLNSSSFGPDLCTYNSLIRVLCLV 300

Query: 301 GKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVY 360
           GKVKDALIVWEELKGSGHEPDAFTYRI+IQGC KS RMDDA  IFNEM+YNG  PDTIVY
Sbjct: 301 GKVKDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNGFCPDTIVY 360

Query: 361 NSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKK 420
           N+LL+GLFKARKV EACQ+F+KMV++ VRAS WT+NI+I GLFRNGRA AGYTLFCDLKK
Sbjct: 361 NTLLDGLFKARKVMEACQVFEKMVEDGVRASCWTHNIVICGLFRNGRAAAGYTLFCDLKK 420

Query: 421 KGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDG 480
           KG+ VD +TYSI++LQLC+E  LEEALQLVEEMEARGFVVDL+TITSLLI  HKQG+WD 
Sbjct: 421 KGKFVDGITYSIVVLQLCREGQLEEALQLVEEMEARGFVVDLVTITSLLIGFHKQGRWDW 480

Query: 481 LERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAA 540
            ERLMKHIR+G+LVPNVL WK NME  +K  +++RKD++ +F  + +LSE++S  +S+  
Sbjct: 481 TERLMKHIRDGNLVPNVLNWKANMEAYMKAPQSRRKDYTPMFPSEGNLSEIMSLISSADT 540

Query: 541 KVNIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDI 600
           +++     E    +  D WSSSPY+++LA+   S     Q  S+ +G+R+Q K  +SFDI
Sbjct: 541 EMDGSPGSEEDVAQHEDQWSSSPYMDQLASQLKSIDVSSQLLSLSRGQRVQAKGIDSFDI 600

Query: 601 NMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNE 660
           +MVNT+LSIFLAKGKL+LACKLFEIFS+MGV+PV YTYNSM+++FVKKGYF++AWG+F+E
Sbjct: 601 DMVNTYLSIFLAKGKLSLACKLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFNEAWGVFHE 660

Query: 661 MGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGR 720
           MGE VCP DIATYNVIIQGLGKMGRADLAS+VL+ LM+QGGYLDIVMYNTLINALGKAGR
Sbjct: 661 MGEKVCPPDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGR 720

Query: 721 MDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTT 780
           +D+  KLF QMR+SGINPDVVTFNTLIE+H+KAG+LK AYKFLK+MLD+GCSPNHVTDTT
Sbjct: 721 IDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAGCSPNHVTDTT 780

Query: 781 LDFLGREMEKARYEKASIIR 799
           LDFLG+E+EK RY+KASIIR
Sbjct: 781 LDFLGKEIEKLRYKKASIIR 785

BLAST of Cucsa.349850 vs. TAIR10
Match: AT4G01570.1 (AT4G01570.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 978.8 bits (2529), Expect = 2.0e-285
Identity = 494/805 (61.37%), Postives = 627/805 (77.89%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTA-STLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLL 60
           MRHGR      +I   S    S    L ++LL+AS++KTLS+SGTR+L  +S+PIS P++
Sbjct: 1   MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60

Query: 61  LQILHSRSLNPSHKLDFFKWC-SLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKR 120
           LQIL   S++PS KLDFF+WC SL P + HS + YSQIF  +CR+G L EVP LL SMK 
Sbjct: 61  LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120

Query: 121 DGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGL 180
           DGV++D    K+LLD+ IRSGK+++AL +LD+ME+LG  L  + Y+SVL+AL++K+++ L
Sbjct: 121 DGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL 180

Query: 181 ALSIFFKLLDGFNNGGQVDSAATTF-HFLPNSLACNELLVALRKLDMRVEFKKVFDKLRA 240
           ALSI FKLL+  +N    D+       +LP ++A NELLV LR+ DMR EFK+VF+KL+ 
Sbjct: 181 ALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG 240

Query: 241 IESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLV-SESFSPDLCTYNSIIHVLC 300
           ++ F+F  + YNICI+ FGCWG LD ALSLFKEMKE+S V   SF PD+CTYNS+IHVLC
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300

Query: 301 LVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTI 360
           L GK KDALIVW+ELK SGHEPD  TYRI+IQGCCKS RMDDA  I+ EM+YNG +PDTI
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360

Query: 361 VYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDL 420
           VYN LL+G  KARKVTEACQLF+KMVQE VRAS WTYNILIDGLFRNGRAEAG+TLFCDL
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420

Query: 421 KKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQW 480
           KKKGQ VDA+T+SI+ LQLC+E  LE A++LVEEME RGF VDL+TI+SLLI  HKQG+W
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480

Query: 481 DGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASS 540
           D  E+LMKHIREG+LVPNVL+W   +E S+K  ++K KD++ +F  K    +++S   S 
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSE 540

Query: 541 AAKVNIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSF 600
               +   S E     + D WSSSPY+++LA+  N    +   F + +G+R++ K D SF
Sbjct: 541 ----DDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPL---FGLARGQRVEAKPD-SF 600

Query: 601 DINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPV-KYTYNSMLSSFVKKGYFHQAWGI 660
           D++M+NTFLSI+L+KG L+LACKLFEIF+ MGV  +  YTYNSM+SSFVKKGYF  A G+
Sbjct: 601 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 660

Query: 661 FNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGK 720
            ++M EN C ADIATYNVIIQGLGKMGRADLAS+VL++L +QGGYLDIVMYNTLINALGK
Sbjct: 661 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 720

Query: 721 AGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVT 780
           A R+D+  +LF  M+++GINPDVV++NT+IEV+SKAG+LK+AYK+LK MLD+GC PNHVT
Sbjct: 721 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 780

Query: 781 DTTLDFLGREMEKARYEKASIIRDK 801
           DT LD+LG+EMEKAR++KAS +R+K
Sbjct: 781 DTILDYLGKEMEKARFKKASFVRNK 797

BLAST of Cucsa.349850 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 209.9 bits (533), Expect = 5.7e-54
Identity = 191/716 (26.68%), Postives = 321/716 (44.83%), Query Frame = 1

Query: 92   TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
            T++ +   LC++G   E    LD M+  G+  + HT+  L+   +R  + D ALE+  +M
Sbjct: 365  TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424

Query: 152  EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFL----- 211
            E LG      TY                  I F  +D +   G   SA  TF  +     
Sbjct: 425  ESLGVKPTAYTY------------------IVF--IDYYGKSGDSVSALETFEKMKTKGI 484

Query: 212  -PNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTAL 271
             PN +ACN  L +L K     E K++F  L+ I     SV  YN+ +  +   G +D A+
Sbjct: 485  APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT-YNMMMKCYSKVGEIDEAI 544

Query: 272  SLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRI 331
             L  EM E         PD+   NS+I+ L    +V +A  ++  +K    +P   TY  
Sbjct: 545  KLLSEMMENGC-----EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 604

Query: 332  IIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQED 391
            ++ G  K+ ++ +A  +F  M   G  P+TI +N+L + L K  +VT A ++  KM+   
Sbjct: 605  LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 664

Query: 392  VRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEAL 451
                 +TYN +I GL +NG+ +     F  +KK     D VT   ++  + K  L+E+A 
Sbjct: 665  CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAY 724

Query: 452  QLVE-------EMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKH--IREGD--LVPN 511
            +++        +  A  F  DLI   S+L            ERL+ +   R+GD  LVP 
Sbjct: 725  KIITNFLYNCADQPANLFWEDLIG--SILAEAGIDNAVSFSERLVANGICRDGDSILVPI 784

Query: 512  VLKWKINMEYSIKYQKNKRKDFSSLFS---------PKEDLSEVISSRASSAAKVNIDNS 571
            +        YS K+  N      +LF          PK     ++      A  + I   
Sbjct: 785  I-------RYSCKH--NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 844

Query: 572  FENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFL 631
                + +           N L +    +  I + F + +     E + N+   N+V   +
Sbjct: 845  VF-LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV---I 904

Query: 632  SIFLAKGKLNLACKLF-EIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVC 691
            S  +  G ++ A  L+ ++ SD   +P   TY  ++    K G  ++A  +F  M +  C
Sbjct: 905  SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 964

Query: 692  PADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 751
              + A YN++I G GK G AD A ++ ++++++G   D+  Y+ L++ L   GR+D+   
Sbjct: 965  RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 1024

Query: 752  LFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDA-YKFLKMMLDSGCSPNHVTDTTL 780
             F +++ SG+NPDVV +N +I    K+ RL++A   F +M    G +P+  T  +L
Sbjct: 1025 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038

HSP 2 Score: 170.6 bits (431), Expect = 3.9e-42
Identity = 147/630 (23.33%), Postives = 280/630 (44.44%), Query Frame = 1

Query: 186 LLDGFNNGGQVDSAATTFHFLPNSLA---CNELLVALRKLDMRVEFKKVFDKLRAIESFE 245
           +L+     G+++  A  F  +   +     N  L   + L ++   K+    LR +  F 
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183

Query: 246 F--SVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 305
           F  + Y YN  I+      +   A+ +++ M     + E F P L TY+S++  L     
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-----ILEGFRPSLQTYSSLMVGLGKRRD 243

Query: 306 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 365
           +   + + +E++  G +P+ +T+ I I+   ++ ++++A  I   M+  G  PD + Y  
Sbjct: 244 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 303

Query: 366 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 425
           L++ L  ARK+  A ++F+KM     +    TY  L+D    N   ++    + +++K G
Sbjct: 304 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 363

Query: 426 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 485
            + D VT++I++  LCK     EA   ++ M  +G + +L T  +L+  + +  + D   
Sbjct: 364 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 423

Query: 486 RLMKHIREGDLVPNVLKWKINMEYSIK----------YQKNKRKDFSSLFSPKEDLSEVI 545
            L  ++    + P    + + ++Y  K          ++K K K  +           ++
Sbjct: 424 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA---------PNIV 483

Query: 546 SSRAS--SAAKVNIDNSFENT--EERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGR 605
           +  AS  S AK   D   +      +D+     S   N +    +   +I +   +    
Sbjct: 484 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL---- 543

Query: 606 RIQEKQDNSF--DINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFV 665
            + E  +N    D+ +VN+ ++      +++ A K+F    +M + P   TYN++L+   
Sbjct: 544 -LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 603

Query: 666 KKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIV 725
           K G   +A  +F  M +  CP +  T+N +   L K     LA  +L K+M+ G   D+ 
Sbjct: 604 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 663

Query: 726 MYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMM 785
            YNT+I  L K G++ +    F QM+   + PD VT  TL+    KA  ++DAYK +   
Sbjct: 664 TYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNF 723

Query: 786 LDSGCSPNHVTDTTLDFLGREMEKARYEKA 795
           L   C+         D +G  + +A  + A
Sbjct: 724 L-YNCADQPANLFWEDLIGSILAEAGIDNA 732

HSP 3 Score: 142.9 bits (359), Expect = 8.6e-34
Identity = 105/384 (27.34%), Postives = 189/384 (49.22%), Query Frame = 1

Query: 92  TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
           TY+ +   LC +  L     + + MK      D  T+  LLD F  +   D+  +    M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354

Query: 152 EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
           E  G   ++ T+  ++ AL +    G A    F  LD   + G           LPN   
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEA----FDTLDVMRDQG----------ILPNLHT 414

Query: 212 CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEM 271
            N L+  L ++    +  ++F  + ++   + + Y Y + I  +G  G   +AL  F++M
Sbjct: 415 YNTLICGLLRVHRLDDALELFGNMESL-GVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 474

Query: 272 KEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCC 331
           K K +     +P++   N+ ++ L   G+ ++A  ++  LK  G  PD+ TY ++++   
Sbjct: 475 KTKGI-----APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 534

Query: 332 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 391
           K   +D+A  + +EM  NG  PD IV NSL+N L+KA +V EA ++F +M +  ++ +  
Sbjct: 535 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 594

Query: 392 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 451
           TYN L+ GL +NG+ +    LF  + +KG   + +T++ +   LCK   +  AL+++ +M
Sbjct: 595 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 654

Query: 452 EARGFVVDLITITSLLIAMHKQGQ 476
              G V D+ T  +++  + K GQ
Sbjct: 655 MDMGCVPDVFTYNTIIFGLVKNGQ 658

HSP 4 Score: 141.7 bits (356), Expect = 1.9e-33
Identity = 103/345 (29.86%), Postives = 164/345 (47.54%), Query Frame = 1

Query: 92   TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
            TY+ +   L  +  +     +   +K  G   D  T+  LLDA+ +SGK D   E+   M
Sbjct: 787  TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846

Query: 152  EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
                      T+N V+  L++   V  AL +++ L+   +             F P +  
Sbjct: 847  STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD-------------FSPTACT 906

Query: 212  CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYG-------YNICIYAFGCWGYLDTA 271
               L+  L K     E K++F+ +          YG       YNI I  FG  G  D A
Sbjct: 907  YGPLIDGLSKSGRLYEAKQLFEGMLD--------YGCRPNCAIYNILINGFGKAGEADAA 966

Query: 272  LSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYR 331
             +LFK M     V E   PDL TY+ ++  LC+VG+V + L  ++ELK SG  PD   Y 
Sbjct: 967  CALFKRM-----VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1026

Query: 332  IIIQGCCKSCRMDDATMIFNEMEYN-GLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQ 391
            +II G  KS R+++A ++FNEM+ + G+ PD   YNSL+  L  A  V EA ++++++ +
Sbjct: 1027 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1086

Query: 392  EDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTY 429
              +  + +T+N LI G   +G+ E  Y ++  +   G   +  TY
Sbjct: 1087 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105

HSP 5 Score: 136.0 bits (341), Expect = 1.1e-31
Identity = 98/285 (34.39%), Postives = 143/285 (50.18%), Query Frame = 1

Query: 213  NELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMK 272
            N L+  L + DM    + VF ++++       V  YN  + A+G  G +D    L+KEM 
Sbjct: 789  NLLIGGLLEADMIEIAQDVFLQVKSTGCIP-DVATYNFLLDAYGKSGKIDELFELYKEMS 848

Query: 273  EKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGS-GHEPDAFTYRIIIQGCC 332
                 + +      T+N +I  L   G V DAL ++ +L       P A TY  +I G  
Sbjct: 849  THECEANTI-----THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 908

Query: 333  KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 392
            KS R+ +A  +F  M   G  P+  +YN L+NG  KA +   AC LF +MV+E VR    
Sbjct: 909  KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 968

Query: 393  TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 452
            TY++L+D L   GR + G   F +LK+ G   D V Y++II  L K   LEEAL L  EM
Sbjct: 969  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1028

Query: 453  E-ARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNV 496
            + +RG   DL T  SL++ +   G  +   ++   I+   L PNV
Sbjct: 1029 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067

HSP 6 Score: 114.0 bits (284), Expect = 4.3e-25
Identity = 113/520 (21.73%), Postives = 213/520 (40.96%), Query Frame = 1

Query: 275 SLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGS---GHEPDAFTYRIIIQGCC 334
           S++ +S  PDL +   +   L        +   ++ + G+    H  +   Y  +++   
Sbjct: 72  SMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNY--MLEALR 131

Query: 335 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 394
              ++++   +F+ M+   +  DT  Y ++   L     + +A     KM +     + +
Sbjct: 132 VDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY 191

Query: 395 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 454
           +YN LI  L ++        ++  +  +G      TYS +++ L K R ++  + L++EM
Sbjct: 192 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 251

Query: 455 EARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKN 514
           E  G   ++ T T  +  + + G+ +    ++K + +    P+V+ + + ++     +K 
Sbjct: 252 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK- 311

Query: 515 KRKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDS----WSSSPYVNRLA 574
                  L   KE   ++ + R        I      ++ RD+DS    WS       + 
Sbjct: 312 -------LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 371

Query: 575 NLANSTSDILQPFSIRQGR--------RIQEKQDNSFDINMVNTFLSIFLAKGKLNLACK 634
           ++   T  IL     + G          +   Q    +++  NT +   L   +L+ A +
Sbjct: 372 DVVTFT--ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 431

Query: 635 LFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLG 694
           LF     +GV P  YTY   +  + K G    A   F +M       +I   N  +  L 
Sbjct: 432 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 491

Query: 695 KMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVV 754
           K GR   A  +   L + G   D V YN ++    K G +D+  KL  +M  +G  PDV+
Sbjct: 492 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 551

Query: 755 TFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
             N+LI    KA R+ +A+K    M +    P  VT  TL
Sbjct: 552 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579

HSP 7 Score: 111.3 bits (277), Expect = 2.8e-24
Identity = 101/396 (25.51%), Postives = 173/396 (43.69%), Query Frame = 1

Query: 100  LCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLE 159
            +CR G    VP +  S K + VS      + L + F +               DLG   +
Sbjct: 744  ICRDGDSILVPIIRYSCKHNNVS----GARTLFEKFTK---------------DLGVQPK 803

Query: 160  LNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVAL 219
            L TYN ++  LL  + + +A  +F           QV S       +P+    N LL A 
Sbjct: 804  LPTYNLLIGGLLEADMIEIAQDVFL----------QVKSTGC----IPDVATYNFLLDAY 863

Query: 220  RKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSE 279
             K     E  +++ ++   E  E +   +NI I      G +D AL L+ ++    +   
Sbjct: 864  GKSGKIDELFELYKEMSTHEC-EANTITHNIVISGLVKAGNVDDALDLYYDL----MSDR 923

Query: 280  SFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDA 339
             FSP  CTY  +I  L   G++ +A  ++E +   G  P+   Y I+I G  K+   D A
Sbjct: 924  DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 983

Query: 340  TMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDG 399
              +F  M   G+ PD   Y+ L++ L    +V E    F ++ +  +      YN++I+G
Sbjct: 984  CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1043

Query: 400  LFRNGRAEAGYTLFCDLK-KKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVV 459
            L ++ R E    LF ++K  +G   D  TY+ +IL L    ++EEA ++  E++  G   
Sbjct: 1044 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1101

Query: 460  DLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPN 495
            ++ T  +L+      G+ +    + + +  G   PN
Sbjct: 1104 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

HSP 8 Score: 110.2 bits (274), Expect = 6.2e-24
Identity = 99/411 (24.09%), Postives = 178/411 (43.31%), Query Frame = 1

Query: 86  FNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAAL 145
           F  S  TYS +   L +   +  V  LL  M+  G+  + +TF + +    R+GK + A 
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278

Query: 146 EILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHF 205
           EIL  M+D G   ++ TY  ++ AL    ++  A  +F K+  G +   +V        F
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338

Query: 206 LPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTAL 265
             N           R LD   +F    +K    +     V  + I + A    G    A 
Sbjct: 339 SDN-----------RDLDSVKQFWSEMEK----DGHVPDVVTFTILVDALCKAGNFGEAF 398

Query: 266 SLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRI 325
                M+++ ++     P+L TYN++I  L  V ++ DAL ++  ++  G +P A+TY +
Sbjct: 399 DTLDVMRDQGIL-----PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 458

Query: 326 IIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQED 385
            I    KS     A   F +M+  G+ P+ +  N+ L  L KA +  EA Q+F  +    
Sbjct: 459 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 518

Query: 386 VRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEAL 445
           +     TYN+++    + G  +    L  ++ + G   D +  + +I  L K   ++EA 
Sbjct: 519 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 578

Query: 446 QLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVL 497
           ++   M+       ++T  +LL  + K G+      L + + +    PN +
Sbjct: 579 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609

HSP 9 Score: 73.9 bits (180), Expect = 4.9e-13
Identity = 62/270 (22.96%), Postives = 118/270 (43.70%), Query Frame = 1

Query: 54   ISHPLLLQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLL 113
            I+H +++  L  ++ N    LD +       +F+ +  TY  +   L +SG L+E   L 
Sbjct: 856  ITHNIVISGL-VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 915

Query: 114  DSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRK 173
            + M   G   +   + +L++ F ++G+ DAA  +   M   G   +L TY+ ++  L   
Sbjct: 916  EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 975

Query: 174  NQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFD 233
             +V   L  F +L +   N              P+ +  N ++  L K     E   +F+
Sbjct: 976  GRVDEGLHYFKELKESGLN--------------PDVVCYNLIINGLGKSHRLEEALVLFN 1035

Query: 234  KLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIH 293
            +++        +Y YN  I   G  G ++ A  ++ E++   L      P++ T+N++I 
Sbjct: 1036 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL-----EPNVFTFNALIR 1095

Query: 294  VLCLVGKVKDALIVWEELKGSGHEPDAFTY 324
               L GK + A  V++ +   G  P+  TY
Sbjct: 1096 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105

BLAST of Cucsa.349850 vs. TAIR10
Match: AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 205.3 bits (521), Expect = 1.4e-52
Identity = 167/639 (26.13%), Postives = 294/639 (46.01%), Query Frame = 1

Query: 154 LGTSLELNTYNSVLVALLRKNQVGL--ALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 213
           +G    +N  + +L    +  ++G    + +F  L+ GF   G+VDSA +          
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS---------- 234

Query: 214 CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEM 273
                              + D++++  S +  +  YN+CI +FG  G +D A   F E+
Sbjct: 235 -------------------LLDEMKS-SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 294

Query: 274 KEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCC 333
           +   L      PD  TY S+I VLC   ++ +A+ ++E L+ +   P  + Y  +I G  
Sbjct: 295 EANGL-----KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 354

Query: 334 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 393
            + + D+A  +       G IP  I YN +L  L K  KV EA ++F++M ++D   +  
Sbjct: 355 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLS 414

Query: 394 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 453
           TYNILID L R G+ +  + L   ++K G   +  T +I++ +LCK + L+EA  + EEM
Sbjct: 415 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 474

Query: 454 EARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWK--INMEYSIKYQ 513
           + +    D IT  SL+  + K G+ D   ++ + + + D   N + +   I   ++   +
Sbjct: 475 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 534

Query: 514 KNKRKDFSSLF----SPKEDLSEVISSRASSAAKVNIDNS-FENTEERDM--DSWSSSPY 573
           ++  K +  +     SP   L          A +     + FE  + R    D+ S S  
Sbjct: 535 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 594

Query: 574 VNRL--ANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKL 633
           ++ L  A  AN T ++   +S+++       Q    D    N  +  F   GK+N A +L
Sbjct: 595 IHGLIKAGFANETYELF--YSMKE-------QGCVLDTRAYNIVIDGFCKCGKVNKAYQL 654

Query: 634 FEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGK 693
            E     G  P   TY S++    K     +A+ +F E        ++  Y+ +I G GK
Sbjct: 655 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 714

Query: 694 MGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVT 753
           +GR D A  +LE+LM++G   ++  +N+L++AL KA  +++    F  M+     P+ VT
Sbjct: 715 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 768

Query: 754 FNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
           +  LI    K  +   A+ F + M   G  P+ ++ TT+
Sbjct: 775 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

HSP 2 Score: 199.5 bits (506), Expect = 7.8e-51
Identity = 162/642 (25.23%), Postives = 298/642 (46.42%), Query Frame = 1

Query: 162 TYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRK 221
           +YNS+L+ + R           F  LD      Q+    +   F P+   C E+++   K
Sbjct: 100 SYNSLLLVMARCRN--------FDALD------QILGEMSVAGFGPSVNTCIEMVLGCVK 159

Query: 222 LDMRVEFKKVFDKLRAIESFEF--SVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSE 281
            +   + ++ +D ++ +  F+F  +   Y   I AF    + D  L+LF++M+E      
Sbjct: 160 AN---KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG---- 219

Query: 282 SFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDA 341
            + P +  + ++I      G+V  AL + +E+K S  + D   Y + I    K  ++D A
Sbjct: 220 -YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 279

Query: 342 TMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDG 401
              F+E+E NGL PD + Y S++  L KA ++ EA ++F+ + +       + YN +I G
Sbjct: 280 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 339

Query: 402 LFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVD 461
               G+ +  Y+L    + KG I   + Y+ I+  L K   ++EAL++ EEM+ +    +
Sbjct: 340 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPN 399

Query: 462 LITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKN-------K 521
           L T   L+  + + G+ D    L   +++  L PNV    I ++   K QK        +
Sbjct: 400 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 459

Query: 522 RKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDS---WSSSPYVNRLANL 581
             D+  + +P E       S      KV   +      E+ +DS    +S  Y + + N 
Sbjct: 460 EMDYK-VCTPDEI---TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 519

Query: 582 ANSTSDILQPFSIRQGRRIQE---KQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSD 641
            N             G +I +    Q+ S D+ ++NT++      G+      +FE    
Sbjct: 520 FNHGRK-------EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 579

Query: 642 MGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADL 701
               P   +Y+ ++   +K G+ ++ + +F  M E  C  D   YN++I G  K G+ + 
Sbjct: 580 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 639

Query: 702 ASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIE 761
           A  +LE++  +G    +V Y ++I+ L K  R+D+   LF + ++  I  +VV +++LI+
Sbjct: 640 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 699

Query: 762 VHSKAGRLKDAYKFLKMMLDSGCSPNHVT-DTTLDFLGREME 788
              K GR+ +AY  L+ ++  G +PN  T ++ LD L +  E
Sbjct: 700 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707

HSP 3 Score: 199.1 bits (505), Expect = 1.0e-50
Identity = 170/696 (24.43%), Postives = 306/696 (43.97%), Query Frame = 1

Query: 86  FNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAAL 145
           F  + S Y+ +        +   +  L   M+  G     H F  L+  F + G+ D+AL
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223

Query: 146 EILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHF 205
            +LD M+      ++  YN  +                    D F   G+VD A   FH 
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCI--------------------DSFGKVGKVDMAWKFFHE 283

Query: 206 LP-NSLACNEL--------LVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFG 265
           +  N L  +E+        L    +LD  VE  +  +K R +       Y YN  I  +G
Sbjct: 284 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC----TYAYNTMIMGYG 343

Query: 266 CWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGH 325
             G  D A SL +  + K  +     P +  YN I+  L  +GKV +AL V+EE+K    
Sbjct: 344 SAGKFDEAYSLLERQRAKGSI-----PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA- 403

Query: 326 EPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQ 385
            P+  TY I+I   C++ ++D A  + + M+  GL P+    N +++ L K++K+ EAC 
Sbjct: 404 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 463

Query: 386 LFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLC 445
           +F++M  +       T+  LIDGL + GR +  Y ++  +       +++ Y+ +I    
Sbjct: 464 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 523

Query: 446 KERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVL 505
                E+  ++ ++M  +    DL  + + +  M K G+ +    + + I+    VP+  
Sbjct: 524 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 583

Query: 506 KWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASS--------AAKVNIDNSFEN 565
            + I +   IK       +   LF   ++   V+ +RA +          KVN   +++ 
Sbjct: 584 SYSILIHGLIK--AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN--KAYQL 643

Query: 566 TEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMV--NTFLS 625
            EE  M +    P V    ++ +  + I +          +E +    ++N+V  ++ + 
Sbjct: 644 LEE--MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM--LFEEAKSKRIELNVVIYSSLID 703

Query: 626 IFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPA 685
            F   G+++ A  + E     G+ P  YT+NS+L + VK    ++A   F  M E  C  
Sbjct: 704 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 763

Query: 686 DIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLF 745
           +  TY ++I GL K+ + + A    +++ +QG     + Y T+I+ L KAG + +   LF
Sbjct: 764 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 821

Query: 746 GQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLK 763
            + + +G  PD   +N +IE  S   R  DA+   +
Sbjct: 824 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

BLAST of Cucsa.349850 vs. TAIR10
Match: AT3G22470.1 (AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-47
Identity = 124/502 (24.70%), Postives = 233/502 (46.41%), Query Frame = 1

Query: 274 KSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKS 333
           K +       D+ T   +I+  C   K+  A  V       G+EPD  T+  ++ G C  
Sbjct: 94  KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153

Query: 334 CRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTY 393
            R+ +A  + + M      PD +  ++L+NGL    +V+EA  L D+MV+   +    TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 394 NILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEA 453
             +++ L ++G +     LF  ++++      V YSI+I  LCK+   ++AL L  EME 
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273

Query: 454 RGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKR 513
           +G   D++T +SL+  +   G+WD   ++++ +   +++P+V+ +   ++  +K  K   
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK--- 333

Query: 514 KDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDSWSSSPYVNRLANLANST 573
                L   KE  +E+I+   +                   D+ + +  ++      N  
Sbjct: 334 -----LLEAKELYNEMITRGIAP------------------DTITYNSLIDGFCK-ENCL 393

Query: 574 SDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVK 633
            +  Q F +   +  +       DI   +  ++ +    +++   +LF   S  G+ P  
Sbjct: 394 HEANQMFDLMVSKGCEP------DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 453

Query: 634 YTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEK 693
            TYN+++  F + G  + A  +F EM     P  + TY +++ GL   G  + A  + EK
Sbjct: 454 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 513

Query: 694 LMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGR 753
           + +    L I +YN +I+ +  A ++DD   LF  + + G+ PDVVT+N +I    K G 
Sbjct: 514 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 562

Query: 754 LKDAYKFLKMMLDSGCSPNHVT 776
           L +A    + M + GC+P+  T
Sbjct: 574 LSEADMLFRKMKEDGCTPDDFT 562

HSP 2 Score: 151.8 bits (382), Expect = 1.9e-36
Identity = 111/388 (28.61%), Postives = 186/388 (47.94%), Query Frame = 1

Query: 88  HSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEI 147
           H   T + + +  CR   L     +L    + G   D+ TF  L++ F   G+   A+ +
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162

Query: 148 LDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLP 207
           +D M ++    +L T ++++  L  K +V  AL +  ++++              + F P
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE--------------YGFQP 222

Query: 208 NSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSL 267
           + +    +L  L K         +F K+    + + SV  Y+I I +    G  D ALSL
Sbjct: 223 DEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASVVQYSIVIDSLCKDGSFDDALSL 282

Query: 268 FKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIII 327
           F EM+ K + +     D+ TY+S+I  LC  GK  D   +  E+ G    PD  T+  +I
Sbjct: 283 FNEMEMKGIKA-----DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 342

Query: 328 QGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVR 387
               K  ++ +A  ++NEM   G+ PDTI YNSL++G  K   + EA Q+FD MV +   
Sbjct: 343 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 402

Query: 388 ASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQL 447
               TY+ILI+   +  R + G  LF ++  KG I + +TY+ ++L  C+   L  A +L
Sbjct: 403 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 462

Query: 448 VEEMEARGFVVDLITITSLLIAMHKQGQ 476
            +EM +RG    ++T   LL  +   G+
Sbjct: 463 FQEMVSRGVPPSVVTYGILLDGLCDNGE 470

HSP 3 Score: 149.8 bits (377), Expect = 7.0e-36
Identity = 142/567 (25.04%), Postives = 240/567 (42.33%), Query Frame = 1

Query: 128 FKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLL 187
           F  L  A  R+ +YD  L     ME  G   ++ T   ++    RK ++  A S+  +  
Sbjct: 73  FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR-- 132

Query: 188 DGFNNGGQVDSAATTFHFLPNSLACN-ELLVALRKLDMRVEFKKVFDKLRAIESFEFSVY 247
             +  G + D+   TF  L N       +  A+  +D  VE K+  D +        S  
Sbjct: 133 -AWKLGYEPDTI--TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV------STL 192

Query: 248 GYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALI 307
              +C+      G +  AL L   M     V   F PD  TY  +++ LC  G    AL 
Sbjct: 193 INGLCLK-----GRVSEALVLIDRM-----VEYGFQPDEVTYGPVLNRLCKSGNSALALD 252

Query: 308 VWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLF 367
           ++ +++    +     Y I+I   CK    DDA  +FNEME  G+  D + Y+SL+ GL 
Sbjct: 253 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 312

Query: 368 KARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAV 427
              K  +  ++  +M+  ++     T++ LID   + G+      L+ ++  +G   D +
Sbjct: 313 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 372

Query: 428 TYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHI 487
           TY+ +I   CKE  L EA Q+ + M ++G   D++T + L+ +  K  + D   RL + I
Sbjct: 373 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 432

Query: 488 REGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAK---VNID 547
               L+PN + +   +   + + ++       L + KE   E++S     +     + +D
Sbjct: 433 SSKGLIPNTITYNTLV---LGFCQS-----GKLNAAKELFQEMVSRGVPPSVVTYGILLD 492

Query: 548 NSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNT 607
              +N E                    N   +I +           +K   +  I + N 
Sbjct: 493 GLCDNGE-------------------LNKALEIFEKM---------QKSRMTLGIGIYNI 552

Query: 608 FLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENV 667
            +       K++ A  LF   SD GV P   TYN M+    KKG   +A  +F +M E+ 
Sbjct: 553 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 580

Query: 668 CPADIATYNVIIQGLGKMGRADLASSV 691
           C  D  TYN++I+    +G + L SSV
Sbjct: 613 CTPDDFTYNILIR--AHLGGSGLISSV 580

HSP 4 Score: 123.6 bits (309), Expect = 5.4e-28
Identity = 99/362 (27.35%), Postives = 161/362 (44.48%), Query Frame = 1

Query: 92  TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
           TYS +   LC  G   +   +L  M    +  D  TF  L+D F++ GK   A E+ + M
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341

Query: 152 EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
              G + +  TYNS++    ++N +  A  +F  ++   + G + D    T+  L NS  
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV---SKGCEPD--IVTYSILINSYC 401

Query: 212 CNELLVALRKLDMRVEFKKVFDKLRAIESFEF-----SVYGYNICIYAFGCWGYLDTALS 271
                          + K+V D +R            +   YN  +  F   G L+ A  
Sbjct: 402 ---------------KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 461

Query: 272 LFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRII 331
           LF+EM     VS    P + TY  ++  LC  G++  AL ++E+++ S        Y II
Sbjct: 462 LFQEM-----VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 521

Query: 332 IQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDV 391
           I G C + ++DDA  +F  +   G+ PD + YN ++ GL K   ++EA  LF KM ++  
Sbjct: 522 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 581

Query: 392 RASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQ 449
               +TYNILI          +   L  ++K  G   D+ T  ++I  L   RL +  L 
Sbjct: 582 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLD 618

HSP 5 Score: 112.1 bits (279), Expect = 1.6e-24
Identity = 104/472 (22.03%), Postives = 197/472 (41.74%), Query Frame = 1

Query: 300 KVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYN 359
           KV DA+ ++E +  S   P    +  +     ++ + D        ME NG+  D     
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 360 SLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKK 419
            ++N   + +K+  A  +  +  +        T++ L++G    GR      L   + + 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 420 GQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGL 479
            Q  D VT S +I  LC +  + EAL L++ M   GF  D +T   +L  + K G     
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 480 ERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKE--DLSEVISSRASSA 539
             L + + E ++  +V+++ I ++   K       D  SLF+  E   +   + + +S  
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCK--DGSFDDALSLFNEMEMKGIKADVVTYSSLI 289

Query: 540 AKVNIDNSFENTEE--RDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNS 599
             +  D  +++  +  R+M   +  P V         T   L    +++G+ ++ K+   
Sbjct: 290 GGLCNDGKWDDGAKMLREMIGRNIIPDV--------VTFSALIDVFVKEGKLLEAKE--- 349

Query: 600 FDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGI 659
                                   L+      G+ P   TYNS++  F K+   H+A  +
Sbjct: 350 ------------------------LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 409

Query: 660 FNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGK 719
           F+ M    C  DI TY+++I    K  R D    +  ++  +G   + + YNTL+    +
Sbjct: 410 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 469

Query: 720 AGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDS 768
           +G+++   +LF +M + G+ P VVT+  L++     G L  A +  + M  S
Sbjct: 470 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

HSP 6 Score: 39.7 bits (91), Expect = 1.0e-02
Identity = 34/172 (19.77%), Postives = 71/172 (41.28%), Query Frame = 1

Query: 629 VNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLAS 688
           +   K +Y   L + +     + A  +F  M ++        +N +   + +  + DL  
Sbjct: 31  ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 90

Query: 689 SVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVH 748
              + +   G   D+     +IN   +  ++     + G+    G  PD +TF+TL+   
Sbjct: 91  GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150

Query: 749 SKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREMEKARYEKASIIRDK 801
              GR+ +A   +  M++    P+ VT +TL  +     K R  +A ++ D+
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTL--INGLCLKGRVSEALVLIDR 200

BLAST of Cucsa.349850 vs. TAIR10
Match: AT1G12700.1 (AT1G12700.1 ATP binding;nucleic acid binding;helicases)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-47
Identity = 136/518 (26.25%), Postives = 245/518 (47.30%), Query Frame = 1

Query: 262 DTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAF 321
           D A++LF+EM     +     P L  ++     +    +    L   ++L+ +G   + +
Sbjct: 70  DDAIALFQEM-----IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 129

Query: 322 TYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKM 381
           T  I+I   C+ C+   A  +  ++   G  PDT  +N+L+ GLF   KV+EA  L D+M
Sbjct: 130 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 189

Query: 382 VQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLL 441
           V+   +    TYN +++G+ R+G       L   ++++    D  TYS II  LC++  +
Sbjct: 190 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 249

Query: 442 EEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKIN 501
           + A+ L +EME +G    ++T  SL+  + K G+W+    L+K +   ++VPNV+ + + 
Sbjct: 250 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 309

Query: 502 MEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDSWSSSP 561
           ++  +K  + K ++ + L+  KE ++  IS                 T    MD +    
Sbjct: 310 LDVFVK--EGKLQEANELY--KEMITRGISPNII-------------TYNTLMDGYCMQ- 369

Query: 562 YVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKLF 621
             NRL+  AN+  D++             +   S DI    + +  +    +++   K+F
Sbjct: 370 --NRLSE-ANNMLDLM------------VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 429

Query: 622 EIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKM 681
              S  G+     TY+ ++  F + G    A  +F EM  +    D+ TY +++ GL   
Sbjct: 430 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 489

Query: 682 GRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTF 741
           G+ + A  + E L +    L IVMY T+I  + K G+++D   LF  +   G+ P+V+T+
Sbjct: 490 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 549

Query: 742 NTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
             +I    K G L +A   L+ M + G +PN  T  TL
Sbjct: 550 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549

HSP 2 Score: 160.2 bits (404), Expect = 5.2e-39
Identity = 116/443 (26.19%), Postives = 206/443 (46.50%), Query Frame = 1

Query: 92  TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
           TY+ I + +CRSG       LL  M+   V  D  T+  ++D+  R G  DAA+ +   M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 152 EDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA 211
           E  G    + TYNS++  L +  +              +N+G  +     +   +PN + 
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGK--------------WNDGALLLKDMVSREIVPNVIT 314

Query: 212 CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEM 271
            N LL    K     E  +++ ++        ++  YN  +  +     L  A ++   M
Sbjct: 315 FNVLLDVFVKEGKLQEANELYKEM-ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 374

Query: 272 KEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCC 331
                V    SPD+ T+ S+I   C+V +V D + V+  +   G   +A TY I++QG C
Sbjct: 375 -----VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 434

Query: 332 KSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW 391
           +S ++  A  +F EM  +G++PD + Y  LL+GL    K+ +A ++F+ + +  +     
Sbjct: 435 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 494

Query: 392 TYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEM 451
            Y  +I+G+ + G+ E  + LFC L  KG   + +TY+++I  LCK+  L EA  L+ +M
Sbjct: 495 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 554

Query: 452 EARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNV--LKWKINMEYSIKYQ 511
           E  G   +  T  +L+ A  + G      +L++ ++      +   +K  I+M  S   +
Sbjct: 555 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 614

Query: 512 KNKRKDFSSLFSPKEDLSEVISS 533
              R   S     ++DL E+  S
Sbjct: 615 LTLRYCLSKGSKSRQDLLELSGS 617

HSP 3 Score: 142.5 bits (358), Expect = 1.1e-33
Identity = 96/403 (23.82%), Postives = 199/403 (49.38%), Query Frame = 1

Query: 93  YSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHME 152
           +S+ F  + R+   + V      ++ +G++ + +T  ++++ F R  K   A  +L  + 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 153 DLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLA- 212
            LG   +  T+N+++  L  + +V  A+ +  ++++   NG Q D    T++ + N +  
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE---NGCQPD--VVTYNSIVNGICR 210

Query: 213 ---CNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLF 272
               +  L  LRK++ R              + +  V+ Y+  I +    G +D A+SLF
Sbjct: 211 SGDTSLALDLLRKMEER--------------NVKADVFTYSTIIDSLCRDGCIDAAISLF 270

Query: 273 KEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQ 332
           KEM+ K + S      + TYNS++  LC  GK  D  ++ +++      P+  T+ +++ 
Sbjct: 271 KEMETKGIKSS-----VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 330

Query: 333 GCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRA 392
              K  ++ +A  ++ EM   G+ P+ I YN+L++G     +++EA  + D MV+     
Sbjct: 331 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 390

Query: 393 SPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLV 452
              T+  LI G     R + G  +F ++ K+G + +AVTYSI++   C+   ++ A +L 
Sbjct: 391 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 450

Query: 453 EEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDL 492
           +EM + G + D++T   LL  +   G+ +    + + +++  +
Sbjct: 451 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

HSP 4 Score: 139.4 bits (350), Expect = 9.5e-33
Identity = 105/430 (24.42%), Postives = 199/430 (46.28%), Query Frame = 1

Query: 74  LDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLD 133
           LDF K   L     H+  T + + +  CR         +L  + + G   D+ TF  L+ 
Sbjct: 108 LDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 167

Query: 134 AFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNG 193
                GK   A+ ++D M + G   ++ TYNS++  + R     LAL +  K+ +     
Sbjct: 168 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER---- 227

Query: 194 GQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIY 253
             V +   T+  + +SL  +  + A   L   +E K +          + SV  YN  + 
Sbjct: 228 -NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI----------KSSVVTYNSLVR 287

Query: 254 AF---GCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEE 313
                G W   D AL L      K +VS    P++ T+N ++ V    GK+++A  +++E
Sbjct: 288 GLCKAGKWN--DGALLL------KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 347

Query: 314 LKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARK 373
           +   G  P+  TY  ++ G C   R+ +A  + + M  N   PD + + SL+ G    ++
Sbjct: 348 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 407

Query: 374 VTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSI 433
           V +  ++F  + +  + A+  TY+IL+ G  ++G+ +    LF ++   G + D +TY I
Sbjct: 408 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 467

Query: 434 IILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGD 493
           ++  LC    LE+AL++ E+++     + ++  T+++  M K G+ +    L   +    
Sbjct: 468 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 513

Query: 494 LVPNVLKWKI 501
           + PNV+ + +
Sbjct: 528 VKPNVMTYTV 513

HSP 5 Score: 110.2 bits (274), Expect = 6.2e-24
Identity = 114/529 (21.55%), Postives = 231/529 (43.67%), Query Frame = 1

Query: 128 FKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLL 187
           F     A  R+ +++  L+    +E  G +  + T N ++    R  +   A S+  K++
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 188 DGFNNGGQVDSAATTFHFLPNSLACN-ELLVALRKLDMRVEFKKVFDKLRAIESFEFSVY 247
                G + D+  TTF+ L   L    ++  A+  +D  VE              +  V 
Sbjct: 151 ---KLGYEPDT--TTFNTLIKGLFLEGKVSEAVVLVDRMVE-----------NGCQPDVV 210

Query: 248 GYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALI 307
            YN  +      G    AL L ++M+E+++ ++ F     TY++II  LC  G +  A+ 
Sbjct: 211 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF-----TYSTIIDSLCRDGCIDAAIS 270

Query: 308 VWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLF 367
           +++E++  G +    TY  +++G CK+ + +D  ++  +M    ++P+ I +N LL+   
Sbjct: 271 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 330

Query: 368 KARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAV 427
           K  K+ EA +L+ +M+   +  +  TYN L+DG     R      +   + +     D V
Sbjct: 331 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 390

Query: 428 TYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHI 487
           T++ +I   C  + +++ +++   +  RG V + +T + L+    + G+    E L + +
Sbjct: 391 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 450

Query: 488 REGDLVPNVLKWKINMEYSIKYQKNKR--KDFSSLFSPKEDLSEVISSRASSAAKVNIDN 547
               ++P+V+ + I ++      K ++  + F  L   K DL  V+ +         I+ 
Sbjct: 451 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI-------IEG 510

Query: 548 SFENTEERD-MDSWSSSPYVNRLANLANST---SDILQPFSIRQGR---RIQEKQDNSFD 607
             +  +  D  + + S P      N+   T   S + +  S+ +     R  E+  N+ +
Sbjct: 511 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 570

Query: 608 INMVNTFLSIFLAKGKLNLACKLFEIFSDMG----VNPVKYTYNSMLSS 643
               NT +   L  G L  + KL E     G     + +K   + +LS+
Sbjct: 571 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591

HSP 6 Score: 63.5 bits (153), Expect = 6.6e-10
Identity = 58/239 (24.27%), Postives = 109/239 (45.61%), Query Frame = 1

Query: 544 NSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNT 603
           +SF ++ ERD  S S+     R   L +   DI +  +I   + +   +     ++    
Sbjct: 36  SSFFSSCERDFSSISNGNVCFR-ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRF 95

Query: 604 FLSIFLAKGKLNLA---CKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 663
           F +I   K + NL    CK  E+    G+    YT N M++ F +      A+ +  ++ 
Sbjct: 96  FSAIARTK-QFNLVLDFCKQLEL---NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 155

Query: 664 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 723
           +     D  T+N +I+GL   G+   A  ++++++E G   D+V YN+++N + ++G   
Sbjct: 156 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 215

Query: 724 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
               L  +M    +  DV T++T+I+   + G +  A    K M   G   + VT  +L
Sbjct: 216 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269

BLAST of Cucsa.349850 vs. NCBI nr
Match: gi|449445529|ref|XP_004140525.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis sativus])

HSP 1 Score: 1605.1 bits (4155), Expect = 0.0e+00
Identity = 803/803 (100.00%), Postives = 803/803 (100.00%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60
           MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL
Sbjct: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60

Query: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120
           QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG
Sbjct: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120

Query: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180
           VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180

Query: 181 SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES 240
           SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES
Sbjct: 181 SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES 240

Query: 241 FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 300
           FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK
Sbjct: 241 FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 300

Query: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 360
           VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 360

Query: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420
           LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420

Query: 421 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 480
           QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE
Sbjct: 421 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 480

Query: 481 RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV 540
           RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV 540

Query: 541 NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM 600
           NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM
Sbjct: 541 NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM 600

Query: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
           VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660

Query: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720
           ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720

Query: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780
           DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD
Sbjct: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780

Query: 781 FLGREMEKARYEKASIIRDKNSS 804
           FLGREMEKARYEKASIIRDKNSS
Sbjct: 781 FLGREMEKARYEKASIIRDKNSS 803

BLAST of Cucsa.349850 vs. NCBI nr
Match: gi|659119716|ref|XP_008459805.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis melo])

HSP 1 Score: 1516.5 bits (3925), Expect = 0.0e+00
Identity = 761/803 (94.77%), Postives = 775/803 (96.51%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60
           MRHGRTR CFL IESHSRT STLS LS LLL+ASITKTLSESGTRTLQHHSLPISHPLLL
Sbjct: 1   MRHGRTRACFLCIESHSRTVSTLSQLSDLLLVASITKTLSESGTRTLQHHSLPISHPLLL 60

Query: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120
           QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG
Sbjct: 61  QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120

Query: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180
           VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180

Query: 181 SIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIES 240
           SIFFKL DG NNGGQ DSAAT+FHFLPNSLACNELLVALRKLDMRVEF+KVFDKLRAIE+
Sbjct: 181 SIFFKLFDGLNNGGQDDSAATSFHFLPNSLACNELLVALRKLDMRVEFRKVFDKLRAIEA 240

Query: 241 FEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGK 300
           FEF+V GYNICIYAFGCWGYLDTALSLFKEMKEKSLV  SF PDLCTYNSII VLCLVGK
Sbjct: 241 FEFNVCGYNICIYAFGCWGYLDTALSLFKEMKEKSLVLGSFGPDLCTYNSIIRVLCLVGK 300

Query: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNS 360
           VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKS RMDDATMIFNEMEYNGLIPD IVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSYRMDDATMIFNEMEYNGLIPDIIVYNS 360

Query: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420
           LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420

Query: 421 QIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLE 480
           Q VD VTYSIIILQLCKE LLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQW+GLE
Sbjct: 421 QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWEGLE 480

Query: 481 RLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKV 540
           RLMKHIREGDLVPNVLKWKINME SIKYQKNKR+DFSSLFSPKEDL EVISSRASSAA+V
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEV 540

Query: 541 NIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINM 600
           NIDNS ENTEE D D WSSSP+V+ LANLANST+DILQPFS+RQGRRIQEK +NSFDINM
Sbjct: 541 NIDNSVENTEEMDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINM 600

Query: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
           VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660

Query: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720
           ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720

Query: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780
           DVNKLF QMRNSGINPDVVTFNTLIEVHSKAGR KDAYKFLKMMLDSGCSPNHVTDTTLD
Sbjct: 721 DVNKLFDQMRNSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTTLD 780

Query: 781 FLGREMEKARYEKASIIRDKNSS 804
           FLGRE+EKARYEKASIIRDKNSS
Sbjct: 781 FLGREIEKARYEKASIIRDKNSS 803

BLAST of Cucsa.349850 vs. NCBI nr
Match: gi|590720575|ref|XP_007051367.1| (Pentatricopeptide repeat-containing protein, putative [Theobroma cacao])

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 553/812 (68.10%), Postives = 648/812 (79.80%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60
           MR+GRT    LS  S     S   HL ++LL+AS+TKTLSESGTR L  +S+PIS PL++
Sbjct: 1   MRNGRTG---LSSVSSPLLKSPSIHLGNILLIASLTKTLSESGTRNLDPNSIPISEPLVI 60

Query: 61  QILHSRSLNPSHKLDFFKWC-SLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRD 120
           QIL   SL PS KLDFF WC S+ PNF HS  TYS IF  LCRSG++ EVP LL +MK D
Sbjct: 61  QILRKHSLEPSKKLDFFNWCRSVKPNFKHSAVTYSHIFRTLCRSGFVEEVPNLLFAMKED 120

Query: 121 GVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLA 180
           GV VDS TFK LLDAFIRSGK+D+ALEILD ME+LG  L L  Y+SVLVAL+RK+QVGLA
Sbjct: 121 GVLVDSDTFKFLLDAFIRSGKFDSALEILDFMEELGAGLNLRVYDSVLVALIRKDQVGLA 180

Query: 181 LSIFFKLLDGFN---NGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLR 240
           LS+FFKLL+  N   +G  VDS+      LP S+A NELLVALRK  MR EFK+VFD LR
Sbjct: 181 LSLFFKLLEACNGNDDGNSVDSS------LPGSIAINELLVALRKAHMRREFKQVFDILR 240

Query: 241 AIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLC 300
               FEF   GYNICI++FGCWG L  +L LFKEMKEK     SF PDLCTYNS+I VLC
Sbjct: 241 EKREFEFDTCGYNICIHSFGCWGDLGASLKLFKEMKEKEKSFGSFGPDLCTYNSLIDVLC 300

Query: 301 LVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTI 360
           LVGKVKDAL+VWEELK SGHEPDAFTYRI+IQGC KS RMDDAT IF+EM+YNG   DT+
Sbjct: 301 LVGKVKDALVVWEELKVSGHEPDAFTYRILIQGCSKSYRMDDATKIFSEMQYNGFAMDTV 360

Query: 361 VYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDL 420
           VYNSLLNGLFKARKV EACQ F+KMVQ+ VRAS WTYNILIDGLFRNGRAEA YTLFCDL
Sbjct: 361 VYNSLLNGLFKARKVMEACQFFEKMVQDGVRASCWTYNILIDGLFRNGRAEAAYTLFCDL 420

Query: 421 KKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQW 480
           KKKGQ VD +TYSI++LQLC+E  LE AL+LVEEMEARGF+VDL+TITSLLI  HKQG+W
Sbjct: 421 KKKGQFVDGITYSIVVLQLCREGQLEGALRLVEEMEARGFIVDLVTITSLLIGFHKQGRW 480

Query: 481 DGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASS 540
           D  ERLMKHIR+G+LVPNVLKWK NME S+K     RKD++ LF  K D  E+++   S 
Sbjct: 481 DWTERLMKHIRDGNLVPNVLKWKANMEASMKNPPKNRKDYTPLFPSKGDFREIMNLLGSV 540

Query: 541 AAKVNIDNSFENTEERDM-------DSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQ 600
              +  +   E+ +E+D        D WSSSPY+++LAN   ST    Q FS+ +G+R+Q
Sbjct: 541 GQAMGTNLDSEDCDEKDQEKPSIDTDQWSSSPYMDQLANQGKSTERSSQLFSLIRGQRVQ 600

Query: 601 EKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYF 660
           EK   SFD++MVNTFLSIFLAKGKL+LACKLFE+F+DMGV+PV YTYNS++SSFVKKGYF
Sbjct: 601 EKGIGSFDVDMVNTFLSIFLAKGKLSLACKLFEVFTDMGVDPVSYTYNSIMSSFVKKGYF 660

Query: 661 HQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTL 720
           ++AWG+ NEM E VCPADIATYN+IIQGLGKMGRAD+ASSVL+KLM+QGGYLD+VMYNTL
Sbjct: 661 NEAWGVLNEMDEKVCPADIATYNLIIQGLGKMGRADIASSVLDKLMKQGGYLDVVMYNTL 720

Query: 721 INALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGC 780
           +NALGKAGR+D+ +KLF QMR SGINPDV+T+NTLIEVH+KAG+L+DAYKFLKMMLD+GC
Sbjct: 721 VNALGKAGRVDEASKLFEQMRTSGINPDVITYNTLIEVHTKAGQLQDAYKFLKMMLDAGC 780

Query: 781 SPNHVTDTTLDFLGREMEKARYEKASIIRDKN 802
           SPNHVTDT LD LG+E+EK R +KAS++R  N
Sbjct: 781 SPNHVTDTILDNLGKEIEKMRLQKASMVRTDN 803

BLAST of Cucsa.349850 vs. NCBI nr
Match: gi|1009142863|ref|XP_015888951.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Ziziphus jujuba])

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 553/804 (68.78%), Postives = 653/804 (81.22%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQH-HSLPISHPLL 60
           MRHGR+   FL     S        L   LL+AS+TKTLS+ GT  L   HS+P+S  LL
Sbjct: 1   MRHGRS---FLVKGQRSHW-----QLGDHLLVASLTKTLSDCGTHNLPDPHSIPLSESLL 60

Query: 61  LQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRD 120
           LQIL +++L+PS KL FF+WCSL P+F HS  +YS IF  +CR+GYLHEVP LL+SMK+D
Sbjct: 61  LQILRTKTLHPSKKLAFFRWCSLVPDFKHSALSYSHIFRTVCRAGYLHEVPDLLNSMKQD 120

Query: 121 GVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLA 180
           GV V S TFK LLD+FI S K+D ALEIL  ME+LGTSL  + YNSVLVAL+RKNQVGLA
Sbjct: 121 GVVVHSETFKALLDSFILSSKFDYALEILHVMEELGTSLNTHIYNSVLVALVRKNQVGLA 180

Query: 181 LSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIE 240
           LSIFFK+L G +              L +S+ACN LLVALRK DMR+EFK+VFDKLR   
Sbjct: 181 LSIFFKILQGNSQ-------------LLSSIACNMLLVALRKADMRLEFKQVFDKLRDGS 240

Query: 241 SFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVG 300
            FEF  +GYNICI+AFGCWG L ++LSLF+EMKE      +  PDLCTYNS+I VLC VG
Sbjct: 241 GFEFDTWGYNICIHAFGCWGDLGSSLSLFREMKE------TVGPDLCTYNSLILVLCFVG 300

Query: 301 KVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYN 360
           KVKDAL+VWEELKGSGHEPDAFTYRI+IQGC KS RMDDA  IFNEM++NG+ PDTIVYN
Sbjct: 301 KVKDALVVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDALKIFNEMQHNGIFPDTIVYN 360

Query: 361 SLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKK 420
           +LL+GLFKARKV EACQLF+KMVQ+ VRAS WT+NILIDGLFRNGRAEAGYTLFCDLKKK
Sbjct: 361 ALLDGLFKARKVNEACQLFEKMVQDGVRASSWTHNILIDGLFRNGRAEAGYTLFCDLKKK 420

Query: 421 GQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGL 480
           GQ VD +TYSI++LQLCKE LL+EAL+ VEEME RGFVVDL+T+TSLLI M+KQG+WD  
Sbjct: 421 GQFVDNITYSIVVLQLCKEGLLDEALRSVEEMEDRGFVVDLVTVTSLLIGMYKQGRWDWS 480

Query: 481 ERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAK 540
           +RLMKHIR G+LVPNVL+WK +ME S+K  + KR+D +  F  + D SE+++    + + 
Sbjct: 481 DRLMKHIRNGNLVPNVLRWKADMEASMKSSQTKREDLTPFFPSRGDFSEIMNLIRYAEST 540

Query: 541 VNIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDIN 600
           V+     EN+   D D WSSSPY+++LAN  NST    Q FS+ +G+R+Q K  +SFDI+
Sbjct: 541 VDGVKDEENSSA-DTDQWSSSPYMDQLANQVNSTDHPSQLFSLSRGQRVQAKGVDSFDID 600

Query: 601 MVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEM 660
           MVNTFLSIFLAKGKL+LACKLFEIFSDMG NPV YTYNSM+SSFVKKGYF++AWG+ NEM
Sbjct: 601 MVNTFLSIFLAKGKLSLACKLFEIFSDMGANPVSYTYNSMMSSFVKKGYFNEAWGVLNEM 660

Query: 661 GENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRM 720
           GENVCPADIATYNVIIQGLGKMGRADLASSVL+KLM+QGGYLDIVMYNTLINALGKAGRM
Sbjct: 661 GENVCPADIATYNVIIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLINALGKAGRM 720

Query: 721 DDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 780
           D+VNKLF QMR SGINPD+VTFNTLIEVHSKAGRLK+AYKFLKMMLD+GC+PNH+TDTTL
Sbjct: 721 DEVNKLFEQMRTSGINPDIVTFNTLIEVHSKAGRLKEAYKFLKMMLDAGCTPNHITDTTL 776

Query: 781 DFLGREMEKARYEKASIIRDKNSS 804
           DFLG+E++K RY+KAS++ +K+ S
Sbjct: 781 DFLGKEIDKLRYQKASMMPNKDDS 776

BLAST of Cucsa.349850 vs. NCBI nr
Match: gi|658045553|ref|XP_008358457.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g01570-like [Malus domestica])

HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 550/810 (67.90%), Postives = 652/810 (80.49%), Query Frame = 1

Query: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQH-HSLPISHPLL 60
           MRHGR    FL  + H   AS    L  +LL+A+ITKTLS SGTR L   H+LP+S PLL
Sbjct: 1   MRHGRP---FLVKDHHHHGAS---QLGDILLVAAITKTLSTSGTRNLPDPHTLPLSEPLL 60

Query: 61  LQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRD 120
            QIL ++SL+PS KLDFFKWCSL  N  HS   YS I     R+G+LHEVP LL SMK D
Sbjct: 61  FQILRAQSLHPSKKLDFFKWCSLTHNIKHSARAYSHILRTASRAGFLHEVPQLLXSMKED 120

Query: 121 GVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLA 180
           GV VDS TFK LLDAFIRSGK+D ALEILD MED+G  L  + YN VLVAL+RKNQVGLA
Sbjct: 121 GVVVDSQTFKALLDAFIRSGKFDYALEILDIMEDVGAGLNTDMYNLVLVALVRKNQVGLA 180

Query: 181 LSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIE 240
           ++I FKLL+   +  QV          PNS+ACNELLVALRK DMRV FK+VF+KLR  E
Sbjct: 181 MAILFKLLEA-GDSTQV----------PNSIACNELLVALRKSDMRVGFKQVFNKLRESE 240

Query: 241 SFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVG 300
            FE   +GYNICI+AFGCWG L T+LSLF+EMK+ +L  ++  PDL TYNS+IHVLCLVG
Sbjct: 241 GFEKDTWGYNICIHAFGCWGDLGTSLSLFREMKDSNL--DNVGPDLSTYNSLIHVLCLVG 300

Query: 301 KVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYN 360
           K+ DALIVWEELKGSGHEPDA TYRI+IQGCC+  R+DDAT IF+EM+ NG IPDTIVYN
Sbjct: 301 KMNDALIVWEELKGSGHEPDAITYRILIQGCCRCYRIDDATKIFSEMQLNGYIPDTIVYN 360

Query: 361 SLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKK 420
           SLL+GLFKARKV + CQLF+KMVQ  VRAS WTYNILIDGLFRNGRAEA YTLFCDLKKK
Sbjct: 361 SLLDGLFKARKVNDGCQLFEKMVQNGVRASTWTYNILIDGLFRNGRAEAAYTLFCDLKKK 420

Query: 421 GQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGL 480
           GQ VD VTYSI++LQLCKE LLEEAL LVEEME RGF VDL+TI+SL+I ++K+G+WD  
Sbjct: 421 GQFVDGVTYSIVVLQLCKEGLLEEALGLVEEMERRGFTVDLVTISSLVIGLYKEGRWDWT 480

Query: 481 ERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVIS--SRASSA 540
           ++LMKHIR+G+LVP+VLKWK++ME S+K  +  RKD++ LF  K DLSE++S    A S 
Sbjct: 481 DKLMKHIRDGNLVPSVLKWKVDMEASLKNPQRNRKDYTPLFPSKGDLSEIMSLIKSAEST 540

Query: 541 AKVNIDNSFENTEERDMD------SWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEK 600
              ++D+     +E D +       WSSSP++++LAN   ST    Q FS+ +G+R+Q K
Sbjct: 541 MDADLDSEAARVKEDDKNLSTDTGQWSSSPHMDQLANQLKSTDHSSQLFSLSRGQRVQAK 600

Query: 601 QDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQ 660
            +N+FDI+MVNTFLS+FLAKGKL++ACKLFEIFSD+G NPV YTYNS +SSFVKKGYF++
Sbjct: 601 GENTFDIDMVNTFLSLFLAKGKLSIACKLFEIFSDLGENPVSYTYNSXMSSFVKKGYFNE 660

Query: 661 AWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLIN 720
           AWG+ NEMGE VCP DIATYNVIIQGLGKMGRADLASSVL+KL+EQGGYLD+VMYNTLIN
Sbjct: 661 AWGVLNEMGERVCPTDIATYNVIIQGLGKMGRADLASSVLDKLIEQGGYLDVVMYNTLIN 720

Query: 721 ALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSP 780
           ALGKA R+D+VNKLF QM++SGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLD+GC+P
Sbjct: 721 ALGKASRIDEVNKLFEQMKSSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDAGCTP 780

Query: 781 NHVTDTTLDFLGREMEKARYEKASIIRDKN 802
           NHVTDTTLDFLG+E+EK RY+KAS++R+K+
Sbjct: 781 NHVTDTTLDFLGKEIEKMRYQKASMVRNKD 791