Bhi12G001998 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G001998
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein
Location	chr12 : 71185427 .. 71191580 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATGATTTTTAATGAAATGGAGTACAATGGATTTATCCCAGATACCATTGTGTATAATTCTCTCCTCAACGGCCTATTTAAGGCTCGGAAAGTTACTGAAGCATGTCAACTTTTTGATAAAATGGTGCAAGAAGGTATAAGAGCTTCTCCTTGGACGTACAATATTCTAATTGATGGATTGTTTAGGAATGGAAGAGCTGAAGCTAGCTACTCTTTATTCTGTGATATGAAGAAAAAGGGTCAATTTGTGGATGGTGTTACTTACAGCATCATTGTATTGCAACTGTGTAAAGAGGGATTGCTTGAGGAAGCACTACAATTGGTTGATGAAATGGAAGCGAGAGGCTTCGTTGTCGATCTTATTACTGTAACATCTCTTTTAATTGCAATGCACAAGCAACGCCAGTGGGAAGGGTTAGAGAGGCTCATGAAGCACATTAGAGAAGGTAACTTGGTCCCCAATGTTCTCAAATGGAAGGCTAACATGGAAGATTCAATCAAATATCAGCAAAATAAAAGAAAAGACTACACATTCCTGTTCCCCCCAAAGGAGGATTTGAGTGAGATTATTAGTTCAAGAGCTTCTTCTGCTGCGGAAGTTAATGTTGACGATATTATCGAAAACACAGAAGAAACAGATGCTGACAGTTGGTCATCATCCCCACATGTCGATCTTTTAGCTGATCTTGCAAAGTCTAATGGTGATTTTTTGCAACCATTCTCTCTAGGTCAGGGGCGACGAATCCAAGCAAAAGGGGACAACTCATTCGATATCAATATGGTCAATACATTTTTGTCTATTTTTCTAGCAAAAGGAAAATTGAGCTTAGCTTGTAAGTTGTTTGAGATCTTCAGTGATATGGGTGTCAACCCGGTGAGGTATACCTACAATTCAATGCTGAGTTCATTTGTGAAGAAGGGATACTTTCACCAGGCATGGGGTATATTTAACGAAATGGGCGAGAAGGTATGTCCAGCTGATATAGCCACATACAATGTGATAATTCAAGGACTCGGGAAGATGGGTAGAGCGGATCTTGCAAGTTCTGTTCTGGAAAAGCTAATGGAGCAGGGTGGCTATCTCGATATCGTAATGTACAACACATTGATTAATGCGCTGGGGAAGGCAGGTCAAATGGATGACGTAAATAAGCTTTTTGAGCAGATGAGGAACAGTGGGATAAACCCAGATGTTGTCACTTTTAATACACTTATCGAAGTTCATAGCAAAGCTGGTCGGTTTAATGATGCTTACAAATTCCTGAAAATGATGCTGGATTCAGGCTGTTCCCCGAATCATGTTACAGATACAACTTTGGATTTTCTGGGGAGAGAGATTGAGAAAGTGAGGTATGAAAAAGCTTCAATCATACGTGACAAAAACAGTTCTTGAATGTTTCAATTCTATTACAATTTGGTAGTCTTTCTGTAAGAATGGAGAACCAAGGATTTGCTGGGCATTCTGGGTCCATAACCAAATGAAACATTCATGGGTTTCCTGGCCAAATTTAGGCTCTGTGAAGCATGGACATATTAATTGATAGTACCGTAACGTTTGGTCCCTGCTTTCTTTGAAGAAGCATCTTTCTCAATACGAAAGAAAAAGCTTGCAGGTGGTTTGAGAATGATGCTAGGTCCTTTTTTCCGACAACAGATCGGAGAACCGACTTTCTCAATGTTTCTGTATCGCAGCAGGGAAGCGATTTCATTTATGATATCCGTGAAGGAAATGTTTCAAGATCCAGACCTTTGTGCTTGAGCAGCACTCCCAATGTAAGCATTTTGAATCTGATTTGCTTTGTGAATGAGAAAGTATTTAATAGTCGGTCTAATTTATTTGATCGAGTAATTTTCCGTGGTGGTTAGTTTTCTTATCTTTTCCATATGAAGATTTTTAACATGTTTCAATTAATTGGATGTAAAAAGATTTGAATAATAGACCTTGTGGTCACTAACATTTTATATGCTAATTGAGTTATACACACTTGAATTATTTCTCAATTATATAATTCAATCTAATATAATATCTTACAAAGTAATTACTATTTACAATCACACAGTAAAATGTGGGAAGAGTTCAAATTATCCATTTAATAAGTTTTGATCTAATAATGTTTATATTTTCGACCTCAAGATTAGAGGTTCAATTCCTCTATCCATATAAAACAACCAAAGGAACGGATCATTTTTATTACAATGACTATATGATAATTTTCTTTGTCAATTGGCATGCCGACGTGCTATGATTCGCATGGTAGAGTGAATCTTTTATCATATTCATTTCTCAAAGATTTAGATCGACACCACCTTCACAAGAAAATAGCTAAGAATAAGTAAGAATATTTACATGTAATTTATGAATCAATGGAAATATGAATGTTTTTCTTGATGTCAAATAGGAATGGACTGAAATCTAAATAGGAATTAGACATGTATCATCTTATTTAATATTTTACAATAATAAGTACTTCTGGAGGTTGTTTCTTCTTAGGGAACAACTGTATTTCGTGGTTCAGCAAGAAAGAAAATTGTGTTTCCTTATCTACGTTTGAAGTAGAATATGGTGTTGCAAGGAGTAGTTGTACTCAATTACTTTGGATGAAGTAGATGTTAATGGAGTATGATGTCTCACGAGATGTTATGACTCTTTTCTATGACAAATATGAGTGCGATTAATATATCCAAAAACATAGTTGAACACAATCGTACTAAGCATATAGACATGAAATATCACTTTATTCATGACTTTGTTGAAAGCAAATAGATTGTGTTTGAACATGTTAACACAAAAAATCAAATAGCTGACATTTTTACCAAGGCTCTTGATGCTAATCGTCTTGAAAGTTTAAGAGCTTCCTTAGAACTCTGCATCTTAAAAGATTAGCAATTAATGTTTTGGGCCAGTCTTTGAACTTTATGGGCCTAACAAATGCTGAATGCAAAGCGATTGTTTAAAAATAAAATCGTATTAATGCGATTGATACTCAAATCAGGGAGACTAAATGGTTCTTAATCTTGAACTGTTTTCCAAATCTATGTTTTCCACAGGTTGATTGTGTCTGTTATCTTCACAAAATCGTGATTGGTTTCTTTTTCCATTTGTTCTTGTGTGAAGGTCTACTTATATTCAGAGTATTTCATTCTCTGAGGGTGAACATAAGAATCGGTGCTCATACGTCTGGGAGTAAAATGGTGAGGTATAAGGAAAAAGCAAATAAAAAGCAGGCAGTTGAAGATGTGTCCCCGGTTGCTACAAACAAGTATGGTGTTCGTGTTTATGGAATGTCTATTACAAAGAAAGAGGTTGATGTTCTTCCCTCTTCGGCGAAACAAAGACGGTCTGGTGAAAGCCAACCAGTGAAAACAAAAGGAAAAGAGAAAGTAAGTTCTTAATCTCTTACTTTGACTGATTTAGTAGGAAAAGGAGTTAAAATATATCCTGAAAAGAGTAAGTCTTCGTCTGAAGGTTCATCGAGTAGCATGCATGACTTTGTAATTGTATCTAGAAACCCTAAAGATGTCTCTAGTATTTCTTATCAGGATTATCTGAAGCCAAGGTTTCTGATGAACATTTTGTGAAGATACTAATACTACAACTGATTCTATTTTGAAAACTATTCTTTAGGAGTTTATTCCTACTGATAAAGTTGGCTTTATTTCGATAGAGTCAGAGAATGTCTTATTGCCTGACTCAAATGTGCATGCATTGAATGATTTTGTTAACAAAGTTGTGTCTGAAGCTTTGACCTCCGTTGCATCTTTTACCTATTCATACTAATTCTGAAGTTTATGCTAATACTATTATTCAAGAAGTTAAAACCCCTAGTAATCTTGAAGAAGGGGTTAAGGTTCCTCCTGTGGAAGCTGTTGGGAATGATGCAAATGTTGTGGAAGTTGAAGGTCATTCTAAAGGTTTTCATAAGAATAAAGATGCACAGAATGTTGATAGTGAAGATTCTGATAGTAATGTTCCTCCGTCTGAACGTTCTAATAAAAATCTACAGATGTCAAAAGTGTTGATAGTTTGTCATCAGAGACATCTGATTCTGAATTTGGTCAAGATGAGCCTAAGGATGTATCTGATTCCTCTGAAGGCAGTGAGTTGAAAACCTCCACTGATCCTGACAAGCCTTCTCCTAATTGGGTTACTAGAGCATCTGTTAAAACTCGAGGGAAGAAAGCAACTACTCCTCTGCATGTTTCTTCTATTCCTTTAGATGGAGTATCTTTTTACAGTGAACAAGGTGACAACACGTAGAAATATGTAGTACACAGGAAGATTGTTGATGAGAAGGAATTGTCTGACTGGACTCAAGAATGTTTTAATCTTGTTAATATGATTTTATAAGCCTAGCTGAGCAAAACGATGTTGAATTTAGGCTATTTTATCCTCAATTAGTGCGAGAATTTATTGTTAATCTTTCCTCTGAGTTTGATAATCCTAATAGTCCAGATTTCCAAAAAATGCATGTGTGTCGCCATGCGTTTATCTCCAACGCTGATTTAATTAATAAGTTTTTTAATCGAATAGTGTCTGTAGAGACTCTTGAGAAGCGACCATCTTAAGGAGCTGGCTTTTGAGTTAACTGGTGGGGCTCGTTCGTCCAGGCCCAAGAAAGAGCAATTATCTACTGCAATCTTGAGCTCGAAATATATTGTTGTTCACAAGATTGACATATTCAACTGGTGTCCGTCTTCCCATAAGTATGGTTTATCTATCTCCCTGGCTACTCTGTCATTTCAAATTCATATTGGTACTTCTTTTGGTTTTGGTGCTTTTGTTACGAATCAAATCAAACGTCATATTAGTTTTTAGGCTTTAAAGCTTCCAATTTATTATCCCTAGTTGATTTTGGTGCTTCCAATTTATTTTCAAGCTTAAGAACCAGACATTACTACAGACGCTTCTATTGATGGTATCTATAACGGGTTTATTGAATCCTCTTTCGAAAATCGTGTTCTGCACCATCTATCATCAACTCCAAAGGCTTCAGGAGCGTAAAGATATTGTGCTTGGTTTGCTGGCAACAATGCGTGCAACTTTGGCCTAATCTGCTAGAACATCCTCTTCCGGTGCTTAATTTTTTATGACAGAAAGGGGAGAAGTAGTGAGTGTGTGGTTGATGTTTGGATCGTGGTGGCTGTTGTTCCTTTTGTTGTCATCTTGGTGTTCTATTGTGCTTTTCTGAAGACTTTGTTTCTTTCTAGTTGGTTTGTGCTAATTCTATTGATGTAACTACTTTTGTGAAGACTTCTTTAATGACATTTAGTCATGTTTGACTTTTGTGGTTATTATTGTTCACCAAATGGGAAGTTTGTTGGAGATATGTTGATTAGCTTTATAATTTTCTCTAAGGAAGTGGTTTTGATGTCTCAGAGAAAGTATTAACATCAGGTTTTGACAACAAATTTGTTTCTCTACGAAATACTTTCCTTATCTGGAAATATCCAACTGTGATATTTTCCTTTATTGTAGCATGACTTATTTTCTCCTTTTTGGGAGATGTTTCCTTTTCTGGATTCATTTATAAAAGGAGTGTCTTGGTTTCCTTTCGGTGACCAGTTTTATTACGTTGATTTGTGTTTTTTAAAGCAAGATATTTGCAGTACTCTGACCAAATTGTTCTACATTGTGTTATTGCTTGTTGCTCACTTTATTCCACTTTGTAAGTTCTTCACTCGTTGATTGCAACACTTTGAAGATTATCACAGCTTAGGGGGGAGCCTAAGCCATAATTGCCAGAGAAGGGATTCTCAGTCTTAGGGGGAGCCTAAGACTCAGCTCTAGAGGAGGAATTCTCTATCTTAGGGAGATCCTAAGATCCATCAGTGAAGGGAGTTTGTTGTCTGGAGGAAAGATATCATTGTGAGAAGGAATCTCACACATTATCGGGTGCTGAAATGTCAGACACTAATATTAACATACTTAGGGGGAGCCTAAGTTCAATTGAGAGAGACTCTCACATCTAGGGGGAGTCTAAGTGTCGTGTGAGTTAAGCTCTACATGAGACATTGTAGTAGTCGATGCATTATAGATAATTATACATTATAAATTGTTTGACACTTTAATATCAGTGGATTATCTTTCCTGAGCTTTCTACCCCCA

mRNA sequence

ACCATGATTTTTAATGAAATGGAGTACAATGGATTTATCCCAGATACCATTGTGTATAATTCTCTCCTCAACGGCCTATTTAAGGCTCGGAAAGTTACTGAAGCATGTCAACTTTTTGATAAAATGGTGCAAGAAGGTATAAGAGCTTCTCCTTGGACGTACAATATTCTAATTGATGGATTGTTTAGGAATGGAAGAGCTGAAGCTAGCTACTCTTTATTCTGTGATATGAAGAAAAAGGGTCAATTTGTGGATGGTGTTACTTACAGCATCATTGTATTGCAACTGTGTAAAGAGGGATTGCTTGAGGAAGCACTACAATTGGTTGATGAAATGGAAGCGAGAGGCTTCGTTGTCGATCTTATTACTGTAACATCTCTTTTAATTGCAATGCACAAGCAACGCCAGTGGGAAGGGTTAGAGAGGCTCATGAAGCACATTAGAGAAGGTAACTTGGTCCCCAATGTTCTCAAATGGAAGGCTAACATGGAAGATTCAATCAAATATCAGCAAAATAAAAGAAAAGACTACACATTCCTGTTCCCCCCAAAGGAGGATTTGAGTGAGATTATTAGTTCAAGAGCTTCTTCTGCTGCGGAAGTTAATGTTGACGATATTATCGAAAACACAGAAGAAACAGATGCTGACAGTTGGTCATCATCCCCACATGTCGATCTTTTAGCTGATCTTGCAAAGTCTAATGGTGATTTTTTGCAACCATTCTCTCTAGGTCAGGGGCGACGAATCCAAGCAAAAGGGGACAACTCATTCGATATCAATATGGTCAATACATTTTTGTCTATTTTTCTAGCAAAAGGAAAATTGAGCTTAGCTTGTAAGTTGTTTGAGATCTTCAGTGATATGGGTGTCAACCCGGTGAGGTATACCTACAATTCAATGCTGAGTTCATTTGTGAAGAAGGGATACTTTCACCAGGCATGGGGTATATTTAACGAAATGGGCGAGAAGGTATGTCCAGCTGATATAGCCACATACAATGTGATAATTCAAGGACTCGGGAAGATGGGTAGAGCGGATCTTGCAAGTTCTGTTCTGGAAAAGCTAATGGAGCAGGGTGGCTATCTCGATATCGTAATGTACAACACATTGATTAATGCGCTGGGGAAGGCAGGTCAAATGGATGACGTAAATAAGCTTTTTGAGCAGATGAGGAACAGTGGGATAAACCCAGATGTTGTCACTTTTAATACACTTATCGAAGTTCATAGCAAAGCTGGTCGGTTTAATGATGCTTACAAATTCCTGAAAATGATGCTGGATTCAGGCTGTTCCCCGAATCATGTTACAGATACAACTTTGGATTTTCTGGGGAGAGAGATTGAGAAAGTGAGGTATGAAAAAGCTTCAATCATACGTGACAAAAACAGTTCTTGAATGTTTCAATTCTATTACAATTTGGTAGTCTTTCTGTAAGAATGGAGAACCAAGGATTTGCTGGGCATTCTGGGTCCATAACCAAATGAAACATTCATGGGTTTCCTGGCCAAATTTAGGCTCTGTGAAGCATGGACATATTAATTGATAGTACCGTAACGTTTGGTCCCTGCTTTCTTTGAAGAAGCATCTTTCTCAATACGAAAGAAAAAGCTTGCAGGTGGTTTGAGAATGATGCTAGGTCCTTTTTTCCGACAACAGATCGGAGAACCGACTTTCTCAATGTTTCTGTATCGCAGCAGGGAAGCGATTTCATTTATGATATCCGTGAAGGAAATGTTTCAAGATCCAGACCTTTGTGCTTGAGCAGCACTCCCAATGTCTACTTATATTCAGAGTATTTCATTCTCTGAGGGTGAACATAAGAATCGGTGCTCATACGTCTGGGAGTAAAATGGTGAGGTATAAGGAAAAAGCAAATAAAAAGCAGGCAGTTGAAGATGTGTCCCCGGTTGCTACAAACAAGTATGGTGTTCGTGTTTATGGAATGTCTATTACAAAGAAAGAGGTTGATGTTCTTCCCTCTTCGGCGAAACAAAGACGGTCTGGTGAAAGCCAACCAGTGAAAACAAAAGGAAAAGAGAAATGTCTGTAGAGACTCTTGAGAAGCGACCATCTTAAGGAGCTGGCTTTTGAGTTAACTGGTGGGGCTCGTTCGTCCAGGCCCAAGAAAGAGCAATTATCTACTGCAATCTTGAGCTCGAAATATATTGTTGTTCACAAGATTGACATATTCAACTGGTGTCCGTCTTCCCATAACTTAAGAACCAGACATTACTACAGACGCTTCTATTGATGGTATCTATAACGGGTTTATTGAATCCTCTTTCGAAAATCGTGTTCTGCACCATCTATCATCAACTCCAAAGGCTTCAGGAGCGTAAAGATATTGTGCTTGGTTTGCTGGCAACAATGCGTGCAACTTTGGCCTAATCTGCTAGAACATCCTCTTCCGGTGCTTAATTTTTTATGACAGAAAGGGGAGAAGTAGTGAGTGTGTGGTTGATGTTTGGATCGTGGTGGCTGTTGTTCCTTTTGTTGTCATCTTGGTGTTCTATTGTGCTTTTCTGAAGACTTTGTTTCTTTCTAGTTGGTTTGTGCTAATTCTATTGATGTAACTACTTTTGTGAAGACTTCTTTAATGACATTTAGTCATGTTTGACTTTTGTGGTTATTATTGTTCACCAAATGGGAAGTTTGTTGGAGATATGTTGATTAGCTTTATAATTTTCTCTAAGGAAGTGGTTTTGATGTCTCAGAGAAAGTATTAACATCAGGTTTTGACAACAAATTTGTTTCTCTACGAAATACTTTCCTTATCTGGAAATATCCAACTGTGATATTTTCCTTTATTGTAGCATGACTTATTTTCTCCTTTTTGGGAGATGTTTCCTTTTCTGGATTCATTTATAAAAGGAGTGTCTTGGTTTCCTTTCGGTGACCAGTTTTATTACGTTGATTTGTGTTTTTTAAAGCAAGATATTTGCAGTACTCTGACCAAATTGTTCTACATTGTGTTATTGCTTGTTGCTCACTTTATTCCACTTTGTAAGTTCTTCACTCGTTGATTGCAACACTTTGAAGATTATCACAGCTTAGGGGGGAGCCTAAGCCATAATTGCCAGAGAAGGGATTCTCAGTCTTAGGGGGAGCCTAAGACTCAGCTCTAGAGGAGGAATTCTCTATCTTAGGGAGATCCTAAGATCCATCAGTGAAGGGAGTTTGTTGTCTGGAGGAAAGATATCATTGTGAGAAGGAATCTCACACATTATCGGGTGCTGAAATGTCAGACACTAATATTAACATACTTAGGGGGAGCCTAAGTTCAATTGAGAGAGACTCTCACATCTAGGGGGAGTCTAAGTGTCGTGTGAGTTAAGCTCTACATGAGACATTGTAGTAGTCGATGCATTATAGATAATTATACATTATAAATTGTTTGACACTTTAATATCAGTGGATTATCTTTCCTGAGCTTTCTACCCCCA

Coding sequence (CDS)

ACCATGATTTTTAATGAAATGGAGTACAATGGATTTATCCCAGATACCATTGTGTATAATTCTCTCCTCAACGGCCTATTTAAGGCTCGGAAAGTTACTGAAGCATGTCAACTTTTTGATAAAATGGTGCAAGAAGGTATAAGAGCTTCTCCTTGGACGTACAATATTCTAATTGATGGATTGTTTAGGAATGGAAGAGCTGAAGCTAGCTACTCTTTATTCTGTGATATGAAGAAAAAGGGTCAATTTGTGGATGGTGTTACTTACAGCATCATTGTATTGCAACTGTGTAAAGAGGGATTGCTTGAGGAAGCACTACAATTGGTTGATGAAATGGAAGCGAGAGGCTTCGTTGTCGATCTTATTACTGTAACATCTCTTTTAATTGCAATGCACAAGCAACGCCAGTGGGAAGGGTTAGAGAGGCTCATGAAGCACATTAGAGAAGGTAACTTGGTCCCCAATGTTCTCAAATGGAAGGCTAACATGGAAGATTCAATCAAATATCAGCAAAATAAAAGAAAAGACTACACATTCCTGTTCCCCCCAAAGGAGGATTTGAGTGAGATTATTAGTTCAAGAGCTTCTTCTGCTGCGGAAGTTAATGTTGACGATATTATCGAAAACACAGAAGAAACAGATGCTGACAGTTGGTCATCATCCCCACATGTCGATCTTTTAGCTGATCTTGCAAAGTCTAATGGTGATTTTTTGCAACCATTCTCTCTAGGTCAGGGGCGACGAATCCAAGCAAAAGGGGACAACTCATTCGATATCAATATGGTCAATACATTTTTGTCTATTTTTCTAGCAAAAGGAAAATTGAGCTTAGCTTGTAAGTTGTTTGAGATCTTCAGTGATATGGGTGTCAACCCGGTGAGGTATACCTACAATTCAATGCTGAGTTCATTTGTGAAGAAGGGATACTTTCACCAGGCATGGGGTATATTTAACGAAATGGGCGAGAAGGTATGTCCAGCTGATATAGCCACATACAATGTGATAATTCAAGGACTCGGGAAGATGGGTAGAGCGGATCTTGCAAGTTCTGTTCTGGAAAAGCTAATGGAGCAGGGTGGCTATCTCGATATCGTAATGTACAACACATTGATTAATGCGCTGGGGAAGGCAGGTCAAATGGATGACGTAAATAAGCTTTTTGAGCAGATGAGGAACAGTGGGATAAACCCAGATGTTGTCACTTTTAATACACTTATCGAAGTTCATAGCAAAGCTGGTCGGTTTAATGATGCTTACAAATTCCTGAAAATGATGCTGGATTCAGGCTGTTCCCCGAATCATGTTACAGATACAACTTTGGATTTTCTGGGGAGAGAGATTGAGAAAGTGAGGTATGAAAAAGCTTCAATCATACGTGACAAAAACAGTTCTTGA

Protein sequence

TMIFNEMEYNGFIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEGIRASPWTYNILIDGLFRNGRAEASYSLFCDMKKKGQFVDGVTYSIIVLQLCKEGLLEEALQLVDEMEARGFVVDLITVTSLLIAMHKQRQWEGLERLMKHIREGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDIIENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGQMDDVNKLFEQMRNSGINPDVVTFNTLIEVHSKAGRFNDAYKFLKMMLDSGCSPNHVTDTTLDFLGREIEKVRYEKASIIRDKNSS

Homology

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BLAST of Bhi12G001998 vs. Swiss-Prot
Match: sp|Q8VZE4|PP299_ARATH (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana OX=3702 GN=At4g01570 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.1e-28
Identity = 73/151 (48.34%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 148 REGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDII 207
           REGNLVPNVL+W A +E S+K  Q+K KDYT +FP K    +I+S   S     + +++ 
Sbjct: 491 REGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEV- 550

Query: 208 ENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLS 267
                 + D WSSSP++D    LA         F L +G+R++AK D SFD++M+NTFLS
Sbjct: 551 ---SPMEDDPWSSSPYMD---QLAHQRNQPKPLFGLARGQRVEAKPD-SFDVDMMNTFLS 610

Query: 268 IFLAKGKLSLACKLFEIFSDMGVNPV-RYTY 298
           I+L+KG LSLACKLFEIF+ MGV  +  YTY
Sbjct: 611 IYLSKGDLSLACKLFEIFNGMGVTDLTSYTY 633

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BLAST of Bhi12G001998 vs. TAIR10
Match: AT4G01570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-29
Identity = 73/151 (48.34%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 148 REGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDII 207
           REGNLVPNVL+W A +E S+K  Q+K KDYT +FP K    +I+S   S     + +++ 
Sbjct: 491 REGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEV- 550

Query: 208 ENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLS 267
                 + D WSSSP++D    LA         F L +G+R++AK D SFD++M+NTFLS
Sbjct: 551 ---SPMEDDPWSSSPYMD---QLAHQRNQPKPLFGLARGQRVEAKPD-SFDVDMMNTFLS 610

Query: 268 IFLAKGKLSLACKLFEIFSDMGVNPV-RYTY 298
           I+L+KG LSLACKLFEIF+ MGV  +  YTY
Sbjct: 611 IYLSKGDLSLACKLFEIFNGMGVTDLTSYTY 633

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BLAST of Bhi12G001998 vs. TrEMBL
Match: tr|A0A0A0KFG9|A0A0A0KFG9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101450 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 6.2e-63
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 143 LMKHIREGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVN 202
           LMKHIREG+LVPNVLKWK NME SIKYQ+NKRKD++ LF PKEDLSE+ISSRASSAA+VN
Sbjct: 482 LMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVN 541

Query: 203 VDDIIENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMV 262
           +D+  ENTEE D DSWSSSP+V+ LA+LA S  D LQPFS+ QGRRIQ K DNSFDINMV
Sbjct: 542 IDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMV 601

Query: 263 NTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           NTFLSIFLAKGKL+LACKLFEIFSDMGVNPV+YTY
Sbjct: 602 NTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTY 636

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BLAST of Bhi12G001998 vs. TrEMBL
Match: tr|A0A1S3CBH7|A0A1S3CBH7_CUCME (pentatricopeptide repeat-containing protein At4g01570 OS=Cucumis melo OX=3656 GN=LOC103498827 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 122/150 (81.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 148 REGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDII 207
           REG+LVPNVLKWK NMEDSIKYQ+NKR+D++ LF PKEDL E+ISSRASSAAEVN+D+ +
Sbjct: 487 REGDLVPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEVNIDNSV 546

Query: 208 ENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLS 267
           ENTEE D D WSSSPHVD LA+LA S  D LQPFSL QGRRIQ KG+NSFDINMVNTFLS
Sbjct: 547 ENTEEMDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINMVNTFLS 606

Query: 268 IFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           IFLAKGKL+LACKLFEIFSDMGVNPV+YTY
Sbjct: 607 IFLAKGKLNLACKLFEIFSDMGVNPVKYTY 636

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BLAST of Bhi12G001998 vs. TrEMBL
Match: tr|W9S6J6|W9S6J6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_019583 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.2e-43
Identity = 99/163 (60.74%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 143 LMKHIREG-NLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEV 202
           LMKHIR+G NL+PNVL+WK ++E S+K  Q+KRKDYT +FP K++ SEI+S   S+ A +
Sbjct: 458 LMKHIRDGNNLLPNVLRWKIDLEASLKNPQSKRKDYTPMFPSKDEFSEIMSLIRSANATM 517

Query: 203 -------NVDDIIENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGD 262
                  NVD   + +  +D D WSSSP++D L +   SNG   Q FSL +GRR+QAKG 
Sbjct: 518 KAQLVPDNVDVKDDESVSSDIDQWSSSPYMDQLTNQVLSNGRSSQLFSLSRGRRVQAKGG 577

Query: 263 NSFDINMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           +SFDI+MVNTFLSIFLAKGKLSLACKLFEIF+DMGVNPV YTY
Sbjct: 578 DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTDMGVNPVSYTY 620

[Close]

BLAST of Bhi12G001998 vs. TrEMBL
Match: tr|A0A1Q3BPQ2|A0A1Q3BPQ2_CEPFO (PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2 domain-containing protein/PPR_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13369 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 7.1e-43
Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 143 LMKHIREGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVN 202
           LMKH+R+GNLVPNVLKWKA++E  +K QQ+KRKDYT +FP K DLSEI S   S  +   
Sbjct: 454 LMKHVRDGNLVPNVLKWKADIEALMKSQQSKRKDYTPMFPSKGDLSEITSLIGSVESNFG 513

Query: 203 VDDIIENTE--ETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDIN 262
            +D I++ E    D D WSSSP++D LA   KS     Q FSL +G R+QAKG ++FDI+
Sbjct: 514 SEDGIKDEEVSAADIDEWSSSPYMDRLASQVKSTYYTSQLFSLFKGERVQAKGMDTFDID 573

Query: 263 MVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           MVNTFLSIFLAKGKL++ACKLFEIFSDMGV+PV YTY
Sbjct: 574 MVNTFLSIFLAKGKLNIACKLFEIFSDMGVDPVSYTY 610

[Close]

BLAST of Bhi12G001998 vs. TrEMBL
Match: tr|A0A2P5FH92|A0A2P5FH92_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_069170 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-42
Identity = 95/162 (58.64%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 143 LMKHIREGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVN 202
           LMKHIR+GNL+PNVL+WK +ME S+K  Q+KRKD+  LF  + + SEI++   S+ A + 
Sbjct: 456 LMKHIRDGNLLPNVLRWKMDMESSMKSPQSKRKDFKPLFSSEGEFSEIMNLIRSADATME 515

Query: 203 VDDIIENTE-------ETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDN 262
            + + +NTE        TD D WSSSP++D   +   S G F + FSL +GRR+QAKG  
Sbjct: 516 AEVVPDNTEVKDEENMRTDVDQWSSSPYMDQFTNQVLSTGHFSRLFSLSRGRRVQAKGTA 575

Query: 263 SFDINMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           SFDI+MVNTFLSIFLAKGKLSLACKLFEIF+DMGVNPV YTY
Sbjct: 576 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTDMGVNPVSYTY 617

[Close]

BLAST of Bhi12G001998 vs. NCBI nr
Match: XP_023549441.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 3.8e-64
Identity = 127/150 (84.67%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 148 REGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDII 207
           REG+LVPNVLKWKANMEDS+KYQ+NKRK+Y+ LF PKEDLSEIISSRASS A+VNV DI 
Sbjct: 483 REGDLVPNVLKWKANMEDSVKYQKNKRKNYSSLFSPKEDLSEIISSRASSVAKVNVGDIS 542

Query: 208 ENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLS 267
           ENTEE D D+WSSSPHVDLLA+LAKS GD LQPFSL  G+R++AKGDNSFDI+MVNTFLS
Sbjct: 543 ENTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVEAKGDNSFDIDMVNTFLS 602

Query: 268 IFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           IFLAKGKLSLACKLFEIFSDMGVNPVRYTY
Sbjct: 603 IFLAKGKLSLACKLFEIFSDMGVNPVRYTY 632

[Close]

BLAST of Bhi12G001998 vs. NCBI nr
Match: XP_022929794.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 5.5e-63
Identity = 128/150 (85.33%), Postives = 138/150 (92.00%), Query Frame = 0


Query: 148 REGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDII 207
           REG+LVPNVLKWKANMEDS+KYQ+NKRKDY+ LF PKEDLSEIISSRASS A+  VDDI 
Sbjct: 483 REGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRASSVAK--VDDIS 542

Query: 208 ENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLS 267
           ENTEE D D+WSSSPHVDLLA+LAKS GD LQPFSL  G+R+QAKGDNSFDI+MVNTFLS
Sbjct: 543 ENTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVQAKGDNSFDIDMVNTFLS 602

Query: 268 IFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           IFLAKGKLSLACKLFEIFSDMGVNPVRYTY
Sbjct: 603 IFLAKGKLSLACKLFEIFSDMGVNPVRYTY 630

[Close]

BLAST of Bhi12G001998 vs. NCBI nr
Match: XP_004140525.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis sativus] >KGN46481.1 hypothetical protein Csa_6G101450 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 9.3e-63
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 143 LMKHIREGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVN 202
           LMKHIREG+LVPNVLKWK NME SIKYQ+NKRKD++ LF PKEDLSE+ISSRASSAA+VN
Sbjct: 482 LMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVN 541

Query: 203 VDDIIENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMV 262
           +D+  ENTEE D DSWSSSP+V+ LA+LA S  D LQPFS+ QGRRIQ K DNSFDINMV
Sbjct: 542 IDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMV 601

Query: 263 NTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           NTFLSIFLAKGKL+LACKLFEIFSDMGVNPV+YTY
Sbjct: 602 NTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTY 636

[Close]

BLAST of Bhi12G001998 vs. NCBI nr
Match: XP_022992119.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita maxima])

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-62
Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 0


Query: 148 REGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDII 207
           REG+LVPNVLKWKANMEDS+KYQ+NKRKDY+ LF PKEDLSEIISSRA+S A+VNVDDI 
Sbjct: 483 REGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDDIS 542

Query: 208 ENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLS 267
           ENTEE D D+WSSSPHVDLLA+ AKS GD LQ FSL  G+R+Q+KG+NSFDI+MVNTFLS
Sbjct: 543 ENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTFLS 602

Query: 268 IFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           IFLAKGKLSLACKLF+IFSDMGVNPVRYTY
Sbjct: 603 IFLAKGKLSLACKLFDIFSDMGVNPVRYTY 632

[Close]

BLAST of Bhi12G001998 vs. NCBI nr
Match: XP_008459805.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-61
Identity = 122/150 (81.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 148 REGNLVPNVLKWKANMEDSIKYQQNKRKDYTFLFPPKEDLSEIISSRASSAAEVNVDDII 207
           REG+LVPNVLKWK NMEDSIKYQ+NKR+D++ LF PKEDL E+ISSRASSAAEVN+D+ +
Sbjct: 487 REGDLVPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEVNIDNSV 546

Query: 208 ENTEETDADSWSSSPHVDLLADLAKSNGDFLQPFSLGQGRRIQAKGDNSFDINMVNTFLS 267
           ENTEE D D WSSSPHVD LA+LA S  D LQPFSL QGRRIQ KG+NSFDINMVNTFLS
Sbjct: 547 ENTEEMDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINMVNTFLS 606

Query: 268 IFLAKGKLSLACKLFEIFSDMGVNPVRYTY 298
           IFLAKGKL+LACKLFEIFSDMGVNPV+YTY
Sbjct: 607 IFLAKGKLNLACKLFEIFSDMGVNPVKYTY 636

The following BLAST results are available for this feature:

BLAST of Bhi12G001998 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VZE4\|PP299_ARATH	5.1e-28	48.34	Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi12G001998 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01570.1	2.8e-29	48.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi12G001998 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KFG9\|A0A0A0KFG9_CUCSA	6.2e-63	80.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101450 PE=4 SV=1	[more]
tr\|A0A1S3CBH7\|A0A1S3CBH7_CUCME	1.2e-61	81.33	pentatricopeptide repeat-containing protein At4g01570 OS=Cucumis melo OX=3656 GN...	[more]
tr\|W9S6J6\|W9S6J6_9ROSA	4.2e-43	60.74	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_019583 PE=4 SV=1	[more]
tr\|A0A1Q3BPQ2\|A0A1Q3BPQ2_CEPFO	7.1e-43	62.42	PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2 domain-conta...	[more]
tr\|A0A2P5FH92\|A0A2P5FH92_9ROSA	1.6e-42	58.64	Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=...	[more]

BLAST of Bhi12G001998 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549441.1	3.8e-64	84.67	pentatricopeptide repeat-containing protein At4g01570 [Cucurbita pepo subsp. pep...	[more]
XP_022929794.1	5.5e-63	85.33	pentatricopeptide repeat-containing protein At4g01570 [Cucurbita moschata]	[more]
XP_004140525.1	9.3e-63	80.65	PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis sativu...	[more]
XP_022992119.1	3.5e-62	82.67	pentatricopeptide repeat-containing protein At4g01570 [Cucurbita maxima]	[more]
XP_008459805.1	1.8e-61	81.33	PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001998	Bhi12M001998	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 247..359 e-value: 1.6E-20 score: 75.2 coord: 360..442 e-value: 4.2E-27 score: 96.6 coord: 89..179 e-value: 1.1E-12 score: 49.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..88 e-value: 1.3E-23 score: 86.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 363..406 e-value: 3.8E-14 score: 52.5 coord: 295..341 e-value: 1.8E-13 score: 50.3 coord: 14..62 e-value: 8.9E-16 score: 57.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 81..113 e-value: 3.2E-8 score: 33.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 295..328 e-value: 2.3E-7 score: 28.5 coord: 365..399 e-value: 8.8E-11 score: 39.3 coord: 87..120 e-value: 1.6E-7 score: 29.0 coord: 17..49 e-value: 1.0E-8 score: 32.8 coord: 53..81 e-value: 2.3E-7 score: 28.5 coord: 400..433 e-value: 1.1E-9 score: 35.8 coord: 331..363 e-value: 2.4E-5 score: 22.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 293..327 score: 9.821
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 363..397 score: 13.713
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 50..84 score: 10.731
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 258..292 score: 8.013
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 120..154 score: 7.607
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 328..362 score: 10.084
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 15..49 score: 12.189
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 85..119 score: 11.586
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 398..432 score: 12.902
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 3..447
None	No IPR available	PANTHER	PTHR24015:SF479	SUBFAMILY NOT NAMED	coord: 3..447
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 261..429

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi12G001998	MELO3C022296	Melon (DHL92) v3.5.1	mewgoB093
Bhi12G001998	ClCG06G002380	Watermelon (Charleston Gray)	wcgwgoB499
Bhi12G001998	CmaCh17G005560	Cucurbita maxima (Rimu)	cmawgoB0457
Bhi12G001998	CmoCh17G005370	Cucurbita moschata (Rifu)	cmowgoB0455
Bhi12G001998	Lsi09G017040	Bottle gourd (USVL1VR-Ls)	lsiwgoB011
Bhi12G001998	Cp4.1LG12g04710	Cucurbita pepo (Zucchini)	cpewgoB0174
Bhi12G001998	MELO3C022296.2	Melon (DHL92) v3.6.1	medwgoB094
Bhi12G001998	Cla006732	Watermelon (97103) v1	wgowmB093
Bhi12G001998	Cla97C06G111710	Watermelon (97103) v2	wgowmbB094

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G001998	Cucumber (Gy14) v1	cgywgoB206
Bhi12G001998	Cucumber (Gy14) v2	cgybwgoB511
Bhi12G001998	Wild cucumber (PI 183967)	cpiwgoB539
Bhi12G001998	Cucumber (Chinese Long) v3	cucwgoB551
Bhi12G001998	Cucumber (Chinese Long) v2	cuwgoB536