CmaCh16G009190 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTTAAGAAAGTAATGCTCGTAATAGCTATAACCATGGCTCTATCCATCACTATCACCCTAAAGACCTTCGAAAAGTCAAAAGAGACAACAACACCGGGTGACGTCGAAGGTTCGACGACGACATTGTTGCCATCGAGAAGCTTGAGTCGTTTTCTAGCCGAGGAGGTGAAGAATCCTAGAGCAGCGAGCCATTGCCACAAGAACAAGAAGATGTGCGAGAAAATGCATGGAAAAGGGTGGGAATGTTGCAACAACAAGTGCGTGGATGTGATGCATGACAAGCACAATTGCGGAGGATGCAAGAAGAAATGTAAGTACACGGGGGAGTGTTGTCGAGGGCAGTGCGTTGATGTGGCGTATGACAAGCGGCATTGCGGGCAATGCAACAACCGCTGCAAGCCGGGGAAGTTTTGTGTATACGGCATGTGCGAGTATGCATGA ATGGAAGTTAAGAAAGTAATGCTCGTAATAGCTATAACCATGGCTCTATCCATCACTATCACCCTAAAGACCTTCGAAAAGTCAAAAGAGACAACAACACCGGGTGACGTCGAAGGTTCGACGACGACATTGTTGCCATCGAGAAGCTTGAGTCGTTTTCTAGCCGAGGAGGTGAAGAATCCTAGAGCAGCGAGCCATTGCCACAAGAACAAGAAGATGTGCGAGAAAATGCATGGAAAAGGGTGGGAATGTTGCAACAACAAGTGCGTGGATGTGATGCATGACAAGCACAATTGCGGAGGATGCAAGAAGAAATGTAAGTACACGGGGGAGTGTTGTCGAGGGCAGTGCGTTGATGTGGCGTATGACAAGCGGCATTGCGGGCAATGCAACAACCGCTGCAAGCCGGGGAAGTTTTGTGTATACGGCATGTGCGAGTATGCATGA ATGGAAGTTAAGAAAGTAATGCTCGTAATAGCTATAACCATGGCTCTATCCATCACTATCACCCTAAAGACCTTCGAAAAGTCAAAAGAGACAACAACACCGGGTGACGTCGAAGGTTCGACGACGACATTGTTGCCATCGAGAAGCTTGAGTCGTTTTCTAGCCGAGGAGGTGAAGAATCCTAGAGCAGCGAGCCATTGCCACAAGAACAAGAAGATGTGCGAGAAAATGCATGGAAAAGGGTGGGAATGTTGCAACAACAAGTGCGTGGATGTGATGCATGACAAGCACAATTGCGGAGGATGCAAGAAGAAATGTAAGTACACGGGGGAGTGTTGTCGAGGGCAGTGCGTTGATGTGGCGTATGACAAGCGGCATTGCGGGCAATGCAACAACCGCTGCAAGCCGGGGAAGTTTTGTGTATACGGCATGTGCGAGTATGCATGA MEVKKVMLVIAITMALSITITLKTFEKSKETTTPGDVEGSTTTLLPSRSLSRFLAEEVKNPRAASHCHKNKKMCEKMHGKGWECCNNKCVDVMHDKHNCGGCKKKCKYTGECCRGQCVDVAYDKRHCGQCNNRCKPGKFCVYGMCEYA
BLAST of CmaCh16G009190 vs. Swiss-Prot
Match: STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.2e-33 Identity = 68/151 (45.03%), Postives = 100/151 (66.23%), Query Frame = 1
BLAST of CmaCh16G009190 vs. Swiss-Prot
Match: STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.9e-32 Identity = 74/151 (49.01%), Postives = 98/151 (64.90%), Query Frame = 1
BLAST of CmaCh16G009190 vs. Swiss-Prot
Match: STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 8.5e-30 Identity = 75/167 (44.91%), Postives = 99/167 (59.28%), Query Frame = 1
BLAST of CmaCh16G009190 vs. Swiss-Prot
Match: STGL4_ARATH (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana GN=At1g50650 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14 Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1
BLAST of CmaCh16G009190 vs. Swiss-Prot
Match: STIG1_TOBAC (Protein STIG1 OS=Nicotiana tabacum GN=STIG1 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 8.5e-14 Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TrEMBL
Match: A0A0A0L4Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G067250 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 3.4e-62 Identity = 120/163 (73.62%), Postives = 132/163 (80.98%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TrEMBL
Match: V4UN43_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010614mg PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.0e-42 Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TrEMBL
Match: A0A067F7G1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037083mg PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.0e-42 Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TrEMBL
Match: V7BKL5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G047200g PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 6.7e-42 Identity = 85/159 (53.46%), Postives = 112/159 (70.44%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TrEMBL
Match: I1N0K7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G092400 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39 Identity = 85/151 (56.29%), Postives = 106/151 (70.20%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TAIR10
Match: AT1G50720.1 (AT1G50720.1 Stigma-specific Stig1 family protein) HSP 1 Score: 141.4 bits (355), Expect = 4.6e-34 Identity = 68/151 (45.03%), Postives = 100/151 (66.23%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TAIR10
Match: AT4G26880.1 (AT4G26880.1 Stigma-specific Stig1 family protein) HSP 1 Score: 138.3 bits (347), Expect = 3.9e-33 Identity = 74/151 (49.01%), Postives = 98/151 (64.90%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TAIR10
Match: AT5G55110.1 (AT5G55110.1 Stigma-specific Stig1 family protein) HSP 1 Score: 131.3 bits (329), Expect = 4.8e-31 Identity = 75/167 (44.91%), Postives = 99/167 (59.28%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TAIR10
Match: AT1G11925.1 (AT1G11925.1 Stigma-specific Stig1 family protein) HSP 1 Score: 99.0 bits (245), Expect = 2.6e-21 Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 1
BLAST of CmaCh16G009190 vs. TAIR10
Match: AT1G50650.1 (AT1G50650.1 Stigma-specific Stig1 family protein) HSP 1 Score: 80.9 bits (198), Expect = 7.4e-16 Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1
BLAST of CmaCh16G009190 vs. NCBI nr
Match: gi|659096485|ref|XP_008449121.1| (PREDICTED: uncharacterized protein LOC103491076 [Cucumis melo]) HSP 1 Score: 247.7 bits (631), Expect = 1.3e-62 Identity = 120/164 (73.17%), Postives = 138/164 (84.15%), Query Frame = 1
BLAST of CmaCh16G009190 vs. NCBI nr
Match: gi|778675983|ref|XP_004149335.2| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus]) HSP 1 Score: 245.7 bits (626), Expect = 4.9e-62 Identity = 120/163 (73.62%), Postives = 132/163 (80.98%), Query Frame = 1
BLAST of CmaCh16G009190 vs. NCBI nr
Match: gi|567920838|ref|XP_006452425.1| (hypothetical protein CICLE_v10010614mg [Citrus clementina]) HSP 1 Score: 181.0 bits (458), Expect = 1.5e-42 Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 1
BLAST of CmaCh16G009190 vs. NCBI nr
Match: gi|593691928|ref|XP_007146513.1| (hypothetical protein PHAVU_006G047200g [Phaseolus vulgaris]) HSP 1 Score: 178.3 bits (451), Expect = 9.7e-42 Identity = 85/159 (53.46%), Postives = 112/159 (70.44%), Query Frame = 1
BLAST of CmaCh16G009190 vs. NCBI nr
Match: gi|743906596|ref|XP_011046721.1| (PREDICTED: uncharacterized protein LOC105141248 [Populus euphratica]) HSP 1 Score: 175.6 bits (444), Expect = 6.3e-41 Identity = 84/161 (52.17%), Postives = 116/161 (72.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |