Cla005354 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005354
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Stigma-specific Stig1 family protein (Fragment) (AHRD V1 -- A0MJU1_ARATH); contains Interpro domain(s) IPR006969 Stigma-specific protein Stig1
Location	Chr10 : 5449627 .. 5450106 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTAAGAAACTAGTGCTTGTAATAGCCATAACCATGGCTCTATCCATCGCCCTCACCCTAAAGAAATTCGAAGAGTCGTCAATAACGACAGAAACAAAGACAGATCAGACAAAGACAACAATGACCGACATCGAAGGTTCTTCAACGACAACGACATTGGAGCCATCGAGAAGCCTGAGCCGGTTCCTAGCAGAGGAAACGAAAAACCCTAGAGCGGCTAGCCACTGCCACAAAAACAAGATGATGTGTGAGAAAATGTATGGAAAAGGTTGGGAATGTTGCAACAACAAGTGCGTGAACTTGAGAAATGACAAAGCAAATTGCGGCGGATGCAAGAAGAAATGCAAGTACACGGGGGAGTGTTGTAGAGGACAGTGCGTTGATGTTGCCTATGACAAGCGCCATTGCGGCCGTTGCAATAACAGTTGCCAACGCGGTAAATTTTGTGTATACGGCATGTGTGAGTATGCATGA

mRNA sequence

ATGGAAGTTAAGAAACTAGTGCTTGTAATAGCCATAACCATGGCTCTATCCATCGCCCTCACCCTAAAGAAATTCGAAGAGTCGTCAATAACGACAGAAACAAAGACAGATCAGACAAAGACAACAATGACCGACATCGAAGGTTCTTCAACGACAACGACATTGGAGCCATCGAGAAGCCTGAGCCGGTTCCTAGCAGAGGAAACGAAAAACCCTAGAGCGGCTAGCCACTGCCACAAAAACAAGATGATGTGTGAGAAAATGTATGGAAAAGGTTGGGAATGTTGCAACAACAAGTGCGTGAACTTGAGAAATGACAAAGCAAATTGCGGCGGATGCAAGAAGAAATGCAAGTACACGGGGGAGTGTTGTAGAGGACAGTGCGTTGATGTTGCCTATGACAAGCGCCATTGCGGCCGTTGCAATAACAGTTGCCAACGCGGTAAATTTTGTGTATACGGCATGTGTGAGTATGCATGA

Coding sequence (CDS)

ATGGAAGTTAAGAAACTAGTGCTTGTAATAGCCATAACCATGGCTCTATCCATCGCCCTCACCCTAAAGAAATTCGAAGAGTCGTCAATAACGACAGAAACAAAGACAGATCAGACAAAGACAACAATGACCGACATCGAAGGTTCTTCAACGACAACGACATTGGAGCCATCGAGAAGCCTGAGCCGGTTCCTAGCAGAGGAAACGAAAAACCCTAGAGCGGCTAGCCACTGCCACAAAAACAAGATGATGTGTGAGAAAATGTATGGAAAAGGTTGGGAATGTTGCAACAACAAGTGCGTGAACTTGAGAAATGACAAAGCAAATTGCGGCGGATGCAAGAAGAAATGCAAGTACACGGGGGAGTGTTGTAGAGGACAGTGCGTTGATGTTGCCTATGACAAGCGCCATTGCGGCCGTTGCAATAACAGTTGCCAACGCGGTAAATTTTGTGTATACGGCATGTGTGAGTATGCATGA

Protein sequence

MEVKKLVLVIAITMALSIALTLKKFEESSITTETKTDQTKTTMTDIEGSSTTTTLEPSRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKKKCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA

Homology

[Close]

BLAST of Cla005354 vs. Swiss-Prot
Match: STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-35
Identity = 76/163 (46.63%), Postives = 99/163 (60.74%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKKFEESSITTETKTDQTKTTMTDIEGSSTTTTLEPSRS 60
           M   KL++ IAIT A++IA+         ITT T    T    T  +  ST T + P+R 
Sbjct: 1   MAFVKLLVSIAITTAITIAV---------ITTITNNTTTIREYTSFDAPSTPT-IRPNRL 60

Query: 61  LSRFLAEETKNPRAASHCHKNKMMCEKMYGKG----WECCNNKCVNLRNDKANCGGCKKK 120
           L++    E +NP AA HC++N  +C    G G      CCNNKC+++ +D  NCG CK K
Sbjct: 61  LAQKEVGE-RNPNAADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNK 120

Query: 121 CKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           CK++  CCRGQCV VAYDKRHCG+CN+ C+ G+FCVYG+C YA
Sbjct: 121 CKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152

[Close]

BLAST of Cla005354 vs. Swiss-Prot
Match: STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.1e-34
Identity = 74/161 (45.96%), Postives = 97/161 (60.25%), Query Frame = 1


Query: 4   KKLVLVIAITMALSIALTLKKFEESSITTETKTDQTKTTMTDIEGSSTTTTLEPSRSLSR 63
           +  VL I +T++++I + +     S+  TET   QT T          T TL  +  +SR
Sbjct: 4   RNTVLTILLTISIAIMVLIATVFVSNNKTETLL-QTHTQ---------TQTLITTGRVSR 63

Query: 64  FLAEETKNPR---AASHCHKNKMMCEK--MYGKGWECCNNKCVNLRNDKANCGGCKKKCK 123
           FLA+  KN R   AA HC+K + +C+   MY     CC+NKCV+L  D  NCG CK +CK
Sbjct: 64  FLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCK 123

Query: 124 YTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           +T  CCRG+CV +AYDKRHCG CN+SC  G+FCVYG+C YA
Sbjct: 124 FTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154

[Close]

BLAST of Cla005354 vs. Swiss-Prot
Match: STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32
Identity = 72/164 (43.90%), Postives = 94/164 (57.32%), Query Frame = 1


Query: 5   KLVLVIAITMALSIALTLKKFEESSITTETKTDQTKTTMTDIEGSSTTTTLEPSRSLSRF 64
           KL++ IA+T  ++IA+   K      TT+T T   +    D+    T   + PSR L+  
Sbjct: 6   KLLVTIALTTVVTIAIVTTK-----TTTKTATFALEDPFKDLTPPGTIK-IRPSRFLAEK 65

Query: 65  LAE----ETKNPRAASHCHKNKMMCEKM-YGKG----WECCNNKCVNLRNDKANCGGCKK 124
           + +    + +NP AA HC+K+  +C    Y  G      CCNNKC++L  D  NCG CK 
Sbjct: 66  VDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKN 125

Query: 125 KCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           KCK+   CCRGQCV VAYDKRHCG CN+ C  G+FCVYG+C YA
Sbjct: 126 KCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163

[Close]

BLAST of Cla005354 vs. Swiss-Prot
Match: STIG1_TOBAC (Protein STIG1 OS=Nicotiana tabacum GN=STIG1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15
Identity = 42/154 (27.27%), Postives = 69/154 (44.81%), Query Frame = 1


Query: 6   LVLVIAITMALSIALTLKKFEESSITTETKTDQTKTTMTDIEGSSTTTTLEPSRSLSRFL 65
           L+++I +T++ +   T+      SI    + + T  + TD+  S+      P R L  + 
Sbjct: 6   LLILIILTLSSTPITTM------SIPETNRRNATTNSYTDVALSARKGAFPPPRKLGEYS 65

Query: 66  AEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKKKCKYTGECCR 125
              T               C+++  +   C N  CV++  ++ NCG C   C     CC 
Sbjct: 66  TNSTDYNLICK-------TCKRLSERNTCCFNYSCVDVSTNRFNCGSCGLVCNLGTRCCG 125

Query: 126 GQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           G CVD+  D  +CG+C+N C  G+ C +G C+YA
Sbjct: 126 GICVDIQKDNGNCGKCSNVCSPGQKCSFGFCDYA 146

[Close]

BLAST of Cla005354 vs. Swiss-Prot
Match: STGL4_ARATH (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana GN=At1g50650 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.1e-14
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 1


Query: 95  CCNNKCVNLRNDKANCGGCKKKCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYG 154
           CC N+CV++ +D  +C  C K C++   CC G CVD   D  +CG+C N C+ G  C +G
Sbjct: 74  CCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFG 133

Query: 155 MCEYA 160
           MC YA
Sbjct: 134 MCGYA 138

HSP 2 Score: 39.7 bits (91), Expect = 3.6e-02
Identity = 27/135 (20.00%), Postives = 53/135 (39.26%), Query Frame = 1


Query: 7   VLVIAITMALSIALTLKKFEESSITTETKTDQTKTTM-TDIEGSSTTTTLEPSRSLSR-F 66
           ++ I +T+   I   L       +  + + + T + + + I+ ++TT    P   + + +
Sbjct: 1   MMSIKLTLCALIFFLLNSLLHHVLGHDNQLNTTSSWLKSHIKAATTTNWGRPKPPMCKPW 60

Query: 67  LAEETKNPRAASHCHKNKMM-----------CEKMYGKGWECCNNKCVNLRNDKANCGGC 126
           + + +    A   C +N+ +           C K       CC+  CV+   D +NCG C
Sbjct: 61  ICKRSGPSEARMRCCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQC 120

Query: 127 KKKCKYTGECCRGQC 129
             +C+    C  G C
Sbjct: 121 GNECESGAPCEFGMC 135

[Close]

BLAST of Cla005354 vs. TrEMBL
Match: A0A0A0L4Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G067250 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-70
Identity = 131/164 (79.88%), Postives = 141/164 (85.98%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKKFEESSITT--ETKTDQTKTTMTDIEGSSTTTT---L 60
           MEVKK++LVIA+TMALS+ LT+KKFE SS TT  E KTDQT TT T +EGSSTT T   L
Sbjct: 1   MEVKKIMLVIAVTMALSVTLTMKKFENSSTTTVTEIKTDQTDTT-TVVEGSSTTITNTRL 60

Query: 61  EPSRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKK 120
           EPSRSLSRFLAE  KNPRAASHCHKNK MCEK++GKGW+CCNNKCV+L  DK NCGGCKK
Sbjct: 61  EPSRSLSRFLAEGMKNPRAASHCHKNKHMCEKIHGKGWKCCNNKCVDLTIDKHNCGGCKK 120

Query: 121 KCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           KCKYT ECCRGQCVD AYDKRHCGRCNN C RGKFCVYGMCEYA
Sbjct: 121 KCKYTDECCRGQCVDFAYDKRHCGRCNNRCMRGKFCVYGMCEYA 163

[Close]

BLAST of Cla005354 vs. TrEMBL
Match: V4UN43_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010614mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.9e-43
Identity = 84/162 (51.85%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLK---KFEESSITTETKTDQTKTTMTDIEGSSTTTTLEP 60
           M + K++L IAITMA++I LT+K   + EE+++  E  T+                 L P
Sbjct: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENK--------------LLLP 60

Query: 61  SRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKKKC 120
           S+  SRFLAE  KNPRAA HCHK+  +C  ++G+   CCNNKC++L  D  NCG CKKKC
Sbjct: 61  SKRGSRFLAEADKNPRAADHCHKDNEVCS-LFGRNSTCCNNKCMDLSTDDKNCGACKKKC 120

Query: 121 KYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           K+T  CCRGQCV++++DKRHCGRCNN C++G+FCVYGMC+YA
Sbjct: 121 KFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147

[Close]

BLAST of Cla005354 vs. TrEMBL
Match: A0A067F7G1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037083mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.9e-43
Identity = 84/162 (51.85%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLK---KFEESSITTETKTDQTKTTMTDIEGSSTTTTLEP 60
           M + K++L IAITMA++I LT+K   + EE+++  E  T+                 L P
Sbjct: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENK--------------LLLP 60

Query: 61  SRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKKKC 120
           S+  SRFLAE  KNPRAA HCHK+  +C  ++G+   CCNNKC++L  D  NCG CKKKC
Sbjct: 61  SKRGSRFLAEADKNPRAADHCHKDNEVCS-LFGRNSTCCNNKCMDLSTDDKNCGACKKKC 120

Query: 121 KYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           K+T  CCRGQCV++++DKRHCGRCNN C++G+FCVYGMC+YA
Sbjct: 121 KFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147

[Close]

BLAST of Cla005354 vs. TrEMBL
Match: B9I0Z2_POPTR (Stigma-specific Stig1 family protein OS=Populus trichocarpa GN=POPTR_0011s02620g PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.2e-42
Identity = 87/163 (53.37%), Postives = 109/163 (66.87%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKKFEESSITTETKTD-----QTKTTMTDIEGSSTTTTL 60
           M++ K++ VIAIT A SIALT+K    S +  E K        T TT++          L
Sbjct: 1   MQLVKIIFVIAITTAFSIALTMK----SVVEVEEKQPYEHSIDTSTTLSQGLIMHDEKKL 60

Query: 61  EPSRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKK 120
            PS+ LSRFL EE KNPRAA HC+K+  +C    GK  +CC+NKC++L  DK NCG CK+
Sbjct: 61  MPSKRLSRFLTEE-KNPRAADHCYKDNEICHIQQGKNHKCCSNKCMDLNTDKHNCGSCKR 120

Query: 121 KCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEY 159
           KCKYT +CCRG+CV ++ DKRHCGRCNN CQ G+FCVYGMC Y
Sbjct: 121 KCKYTEDCCRGECVLLSLDKRHCGRCNNRCQDGEFCVYGMCNY 158

[Close]

BLAST of Cla005354 vs. TrEMBL
Match: B9STX7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0752360 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.2e-42
Identity = 83/159 (52.20%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKKFEESSITTETKTDQTKTTMTDIEGSSTTTTLEPSRS 60
           ME+ K++  IAITMALSI LT++   E         D + T             L PS+ 
Sbjct: 1   MELMKIIFFIAITMALSITLTVRSIGEIEDKPPLPVDDSSTFSKGSAVHDEENNLMPSKR 60

Query: 61  LSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKKKCKYT 120
           LSRFLAE+ KNPRAA HCHK++ +C  M GK + CCNNKC++L  D  NCG CKKKC +T
Sbjct: 61  LSRFLAED-KNPRAADHCHKDQDVCYYMGGKNYTCCNNKCLDLSTDDKNCGACKKKCLHT 120

Query: 121 GECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
             CCRGQCV ++ DKRHCG+CNN C  G++CV+GMC YA
Sbjct: 121 QTCCRGQCVYLSLDKRHCGKCNNRCLDGEYCVFGMCSYA 158

[Close]

BLAST of Cla005354 vs. NCBI nr
Match: gi|659096485|ref|XP_008449121.1| (PREDICTED: uncharacterized protein LOC103491076 [Cucumis melo])

HSP 1 Score: 278.1 bits (710), Expect = 9.6e-72
Identity = 134/165 (81.21%), Postives = 145/165 (87.88%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKKFEESSIT--TETKTDQTKTTMTDIEGSSTTTT---L 60
           MEVKK++LVIAITMALS+ LT+KKFE SS T  TETKTDQT TT T IEGSSTT T   L
Sbjct: 1   MEVKKIMLVIAITMALSVTLTMKKFENSSTTLVTETKTDQTDTT-TVIEGSSTTATMTKL 60

Query: 61  EPSRSLSRFLAE-ETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCK 120
           EPSRSL RFLAE ET+NPRAASHCHKNK MCEK++GKGW+CCNNKCVNL ND+ NCG CK
Sbjct: 61  EPSRSLGRFLAEKETRNPRAASHCHKNKQMCEKIHGKGWKCCNNKCVNLMNDRHNCGECK 120

Query: 121 KKCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           KKCKYTGECCRG+CVDVAYDKRHCGRCNN C+ GKFCVYGMCEYA
Sbjct: 121 KKCKYTGECCRGECVDVAYDKRHCGRCNNRCKPGKFCVYGMCEYA 164

[Close]

BLAST of Cla005354 vs. NCBI nr
Match: gi|778675983|ref|XP_004149335.2| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 131/164 (79.88%), Postives = 141/164 (85.98%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKKFEESSITT--ETKTDQTKTTMTDIEGSSTTTT---L 60
           MEVKK++LVIA+TMALS+ LT+KKFE SS TT  E KTDQT TT T +EGSSTT T   L
Sbjct: 1   MEVKKIMLVIAVTMALSVTLTMKKFENSSTTTVTEIKTDQTDTT-TVVEGSSTTITNTRL 60

Query: 61  EPSRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKK 120
           EPSRSLSRFLAE  KNPRAASHCHKNK MCEK++GKGW+CCNNKCV+L  DK NCGGCKK
Sbjct: 61  EPSRSLSRFLAEGMKNPRAASHCHKNKHMCEKIHGKGWKCCNNKCVDLTIDKHNCGGCKK 120

Query: 121 KCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           KCKYT ECCRGQCVD AYDKRHCGRCNN C RGKFCVYGMCEYA
Sbjct: 121 KCKYTDECCRGQCVDFAYDKRHCGRCNNRCMRGKFCVYGMCEYA 163

[Close]

BLAST of Cla005354 vs. NCBI nr
Match: gi|743906596|ref|XP_011046721.1| (PREDICTED: uncharacterized protein LOC105141248 [Populus euphratica])

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-43
Identity = 85/167 (50.90%), Postives = 117/167 (70.06%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKK---------FEESSITTETKTDQTKTTMTDIEGSST 60
           M++ +++ +IAIT+ALS  LT+K+         +++ SI T T+  Q    M D +    
Sbjct: 1   MQLVRIIFIIAITVALSTTLTVKRIGQVEEKPSYDDQSIDTSTRLSQGLNIMNDGK---- 60

Query: 61  TTTLEPSRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCG 120
              L PS+ LSRFLAEE KNPRAA HC+K+  +C+ + GK ++CCNNKC++L  DK NCG
Sbjct: 61  --ELIPSKRLSRFLAEE-KNPRAADHCNKDNEICQILQGKNYKCCNNKCLDLSTDKHNCG 120

Query: 121 GCKKKCKYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEY 159
            CKKKCK+T +CCRG+CV ++ DKRHCG+CNN C +G+FCVYGMC Y
Sbjct: 121 ACKKKCKFTEDCCRGECVLLSLDKRHCGKCNNRCLKGEFCVYGMCNY 160

[Close]

BLAST of Cla005354 vs. NCBI nr
Match: gi|567920838|ref|XP_006452425.1| (hypothetical protein CICLE_v10010614mg [Citrus clementina])

HSP 1 Score: 183.0 bits (463), Expect = 4.2e-43
Identity = 84/162 (51.85%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLK---KFEESSITTETKTDQTKTTMTDIEGSSTTTTLEP 60
           M + K++L IAITMA++I LT+K   + EE+++  E  T+                 L P
Sbjct: 1   MNMMKIILTIAITMAITITLTMKGIGEAEENNLPLEQHTENK--------------LLLP 60

Query: 61  SRSLSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKKKC 120
           S+  SRFLAE  KNPRAA HCHK+  +C  ++G+   CCNNKC++L  D  NCG CKKKC
Sbjct: 61  SKRGSRFLAEADKNPRAADHCHKDNEVCS-LFGRNSTCCNNKCMDLSTDDKNCGACKKKC 120

Query: 121 KYTGECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
           K+T  CCRGQCV++++DKRHCGRCNN C++G+FCVYGMC+YA
Sbjct: 121 KFTEACCRGQCVNLSFDKRHCGRCNNRCEKGQFCVYGMCDYA 147

[Close]

BLAST of Cla005354 vs. NCBI nr
Match: gi|255577125|ref|XP_002529446.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Ricinus communis])

HSP 1 Score: 179.1 bits (453), Expect = 6.1e-42
Identity = 83/159 (52.20%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 1   MEVKKLVLVIAITMALSIALTLKKFEESSITTETKTDQTKTTMTDIEGSSTTTTLEPSRS 60
           ME+ K++  IAITMALSI LT++   E         D + T             L PS+ 
Sbjct: 1   MELMKIIFFIAITMALSITLTVRSIGEIEDKPPLPVDDSSTFSKGSAVHDEENNLMPSKR 60

Query: 61  LSRFLAEETKNPRAASHCHKNKMMCEKMYGKGWECCNNKCVNLRNDKANCGGCKKKCKYT 120
           LSRFLAE+ KNPRAA HCHK++ +C  M GK + CCNNKC++L  D  NCG CKKKC +T
Sbjct: 61  LSRFLAED-KNPRAADHCHKDQDVCYYMGGKNYTCCNNKCLDLSTDDKNCGACKKKCLHT 120

Query: 121 GECCRGQCVDVAYDKRHCGRCNNSCQRGKFCVYGMCEYA 160
             CCRGQCV ++ DKRHCG+CNN C  G++CV+GMC YA
Sbjct: 121 QTCCRGQCVYLSLDKRHCGKCNNRCLDGEYCVFGMCSYA 158

The following BLAST results are available for this feature:

BLAST of Cla005354 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STGL1_ARATH	1.1e-35	46.63	Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 S...	[more]
STGL3_ARATH	6.1e-34	45.96	Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 S...	[more]
STGL2_ARATH	1.1e-32	43.90	Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 S...	[more]
STIG1_TOBAC	6.3e-15	27.27	Protein STIG1 OS=Nicotiana tabacum GN=STIG1 PE=1 SV=1	[more]
STGL4_ARATH	9.1e-14	44.62	Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana GN=At1g50650 PE=3 S...	[more]

BLAST of Cla005354 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4Y5_CUCSA	1.3e-70	79.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G067250 PE=4 SV=1	[more]
V4UN43_9ROSI	2.9e-43	51.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010614mg PE=4 SV=1	[more]
A0A067F7G1_CITSI	2.9e-43	51.85	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037083mg PE=4 SV=1	[more]
B9I0Z2_POPTR	4.2e-42	53.37	Stigma-specific Stig1 family protein OS=Populus trichocarpa GN=POPTR_0011s02620g...	[more]
B9STX7_RICCO	4.2e-42	52.20	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0752360 PE=4 SV=1	[more]

BLAST of Cla005354 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096485\|ref\|XP_008449121.1\|	9.6e-72	81.21	PREDICTED: uncharacterized protein LOC103491076 [Cucumis melo]	[more]
gi\|778675983\|ref\|XP_004149335.2\|	1.8e-70	79.88	PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus]	[more]
gi\|743906596\|ref\|XP_011046721.1\|	1.1e-43	50.90	PREDICTED: uncharacterized protein LOC105141248 [Populus euphratica]	[more]
gi\|567920838\|ref\|XP_006452425.1\|	4.2e-43	51.85	hypothetical protein CICLE_v10010614mg [Citrus clementina]	[more]
gi\|255577125\|ref\|XP_002529446.1\|	6.1e-42	52.20	PREDICTED: stigma-specific STIG1-like protein 1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006969	Stig1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005354	Cla005354.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006969	Stigma-specific protein Stig1	PANTHER	PTHR33227	FAMILY NOT NAMED	coord: 1..159 score: 1.3
IPR006969	Stigma-specific protein Stig1	PFAM	PF04885	Stig1	coord: 31..159 score: 1.6
None	No IPR available	PANTHER	PTHR33227:SF5	STIG1 LIKE PROTEIN-RELATED	coord: 1..159 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla005354	Cla97C10G189240	Watermelon (97103) v2	wmwmbB052
Cla005354	Csa3G067250	Cucumber (Chinese Long) v2	cuwmB194
Cla005354	MELO3C014164	Melon (DHL92) v3.5.1	mewmB453
Cla005354	ClCG10G005000	Watermelon (Charleston Gray)	wcgwmB052
Cla005354	CSPI03G04680	Wild cucumber (PI 183967)	cpiwmB193
Cla005354	Cucsa.042600	Cucumber (Gy14) v1	cgywmB016
Cla005354	CmaCh06G008620	Cucurbita maxima (Rimu)	cmawmB787
Cla005354	CmaCh16G009190	Cucurbita maxima (Rimu)	cmawmB300
Cla005354	CmoCh06G008870	Cucurbita moschata (Rifu)	cmowmB779
Cla005354	CmoCh16G009540	Cucurbita moschata (Rifu)	cmowmB293
Cla005354	Lsi05G005550	Bottle gourd (USVL1VR-Ls)	lsiwmB348
Cla005354	Cp4.1LG14g07430	Cucurbita pepo (Zucchini)	cpewmB212
Cla005354	CsGy3G004730	Cucumber (Gy14) v2	cgybwmB183
Cla005354	MELO3C014164.2	Melon (DHL92) v3.6.1	medwmB435
Cla005354	Carg25354	Silver-seed gourd	carwmB0482
Cla005354	CsaV3_3G004660	Cucumber (Chinese Long) v3	cucwmB204
Cla005354	Bhi11G000427	Wax gourd	wgowmB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005354	Cucurbita moschata (Rifu)	cmowmB006
Cla005354	Watermelon (Charleston Gray)	wcgwmB178