Bhi11G000427 (gene) Wax gourd

NameBhi11G000427
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionStigma-specific Stig1 family protein
Locationchr11 : 12842995 .. 12843913 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCTCTCTCTAAAAAAAACTCTCATTTTCGAAAAAATCAAATCGATCAACATACGCCTTTTCTCTTCGAAACTTCCACAGGCAAAGCCATGGAAGTTAAGAAAGTAATGCTCGTAATAGCCATAACCATGGCTATATCCATCACACTCACCATGAAGAAATTTGAAGAGTCGTCGACGACAACAACAACAGAAACAAAAACATATCAGGCAGAGACAACAACGGCCATTGCCGAAGACTCTTCGACGACAATGACAAAGTTGGAGCCGTCGGGAAGGCTGAGCCGATTCTTAGCGGAGAAAACGAGAAACCCTAGAGCGGCGAGCCATTGCCACAAGAACAGGAAGATGTGCGAGAAAATGCATGGAAAAGGGTGGGAATGTTGCAACAACAAGTGCGTGAACTTGATGAATGACAAGCATAATTGCGGAGGATGCAAGAAGAAATGCAAGTATACGGGGGAGTGTTGTCGAGGACAGTGCGTTGATGTTGCCTATGACAAGCGCCATTGCGGGCGTTGCGACAACCGTTGCAAGCGCGGTAAATTTTGTGTATACGGCATGTGTGAGTATGCATGATATATTCAAAATATTATTCTTAAGACAATTATTACAAAGGTTTCTTTTACCTTATCCATTATTTCAATGGATTATCTAATTAATCATCTTGAATTTTCTTGTTAACAAAAAAAAAAAAAAAAAAGCAATTTGAAAAAGTTTCAAATACAATAAAAAAGAATCACATAATTTATTTATTGTGGTTCTTGTCAAAGTTGAATTAAAAATATATATTTAAAATAAGAGTGGTGTTATACAAAAGAAAATTAATTAAGTATTATTTTGTGCCATTGTTTTTTTTTTTTTTTTGGTTGATTAGGGAGGATTTATTTGTAACTAAAACATGTTATTACATGCTTCAC

mRNA sequence

CCCCTCTCTCTAAAAAAAACTCTCATTTTCGAAAAAATCAAATCGATCAACATACGCCTTTTCTCTTCGAAACTTCCACAGGCAAAGCCATGGAAGTTAAGAAAGTAATGCTCGTAATAGCCATAACCATGGCTATATCCATCACACTCACCATGAAGAAATTTGAAGAGTCGTCGACGACAACAACAACAGAAACAAAAACATATCAGGCAGAGACAACAACGGCCATTGCCGAAGACTCTTCGACGACAATGACAAAGTTGGAGCCGTCGGGAAGGCTGAGCCGATTCTTAGCGGAGAAAACGAGAAACCCTAGAGCGGCGAGCCATTGCCACAAGAACAGGAAGATGTGCGAGAAAATGCATGGAAAAGGGTGGGAATGTTGCAACAACAAGTGCGTGAACTTGATGAATGACAAGCATAATTGCGGAGGATGCAAGAAGAAATGCAAGTATACGGGGGAGTGTTGTCGAGGACAGTGCGTTGATGTTGCCTATGACAAGCGCCATTGCGGGCGTTGCGACAACCGTTGCAAGCGCGGTAAATTTTGTGTATACGGCATGTGTGAGTATGCATGATATATTCAAAATATTATTCTTAAGACAATTATTACAAAGGTTTCTTTTACCTTATCCATTATTTCAATGGATTATCTAATTAATCATCTTGAATTTTCTTGTTAACAAAAAAAAAAAAAAAAAAGCAATTTGAAAAAGTTTCAAATACAATAAAAAAGAATCACATAATTTATTTATTGTGGTTCTTGTCAAAGTTGAATTAAAAATATATATTTAAAATAAGAGTGGTGTTATACAAAAGAAAATTAATTAAGTATTATTTTGTGCCATTGTTTTTTTTTTTTTTTTGGTTGATTAGGGAGGATTTATTTGTAACTAAAACATGTTATTACATGCTTCAC

Coding sequence (CDS)

ATGGAAGTTAAGAAAGTAATGCTCGTAATAGCCATAACCATGGCTATATCCATCACACTCACCATGAAGAAATTTGAAGAGTCGTCGACGACAACAACAACAGAAACAAAAACATATCAGGCAGAGACAACAACGGCCATTGCCGAAGACTCTTCGACGACAATGACAAAGTTGGAGCCGTCGGGAAGGCTGAGCCGATTCTTAGCGGAGAAAACGAGAAACCCTAGAGCGGCGAGCCATTGCCACAAGAACAGGAAGATGTGCGAGAAAATGCATGGAAAAGGGTGGGAATGTTGCAACAACAAGTGCGTGAACTTGATGAATGACAAGCATAATTGCGGAGGATGCAAGAAGAAATGCAAGTATACGGGGGAGTGTTGTCGAGGACAGTGCGTTGATGTTGCCTATGACAAGCGCCATTGCGGGCGTTGCGACAACCGTTGCAAGCGCGGTAAATTTTGTGTATACGGCATGTGTGAGTATGCATGA

Protein sequence

MEVKKVMLVIAITMAISITLTMKKFEESSTTTTTETKTYQAETTTAIAEDSSTTMTKLEPSGRLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKHNCGGCKKKCKYTGECCRGQCVDVAYDKRHCGRCDNRCKRGKFCVYGMCEYA
BLAST of Bhi11G000427 vs. TAIR10
Match: AT1G50720.1 (Stigma-specific Stig1 family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0

Query: 61  SGRLSRFLAEKTRNPR---AASHCHKNRKMCEK--MHGKGWECCNNKCVNLMNDKHNCG 115
           +GR+SRFLA+  +N R   AA HC+K  ++C+   M+     CC+NKCV+L  D  NCG
Sbjct: 48  TGRVSRFLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCG 106

BLAST of Bhi11G000427 vs. TAIR10
Match: AT4G26880.1 (Stigma-specific Stig1 family protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.4e-07
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0

Query: 60  PSGRLSRFLAEK---TRNPRAASHCHKNRKMCEKMHGKG----WECCNNKCVNLMNDKHN 115
           P+ R +R LA+K    RNP AA HC++N ++C    G G      CCNNKC+++ +D +N
Sbjct: 43  PTIRPNRLLAQKEVGERNPNAADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNN 102

BLAST of Bhi11G000427 vs. TAIR10
Match: AT5G55110.1 (Stigma-specific Stig1 family protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 28/65 (43.08%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 63  RLSRFLAE--------KTRNPRAASHCHKNRKMCEKMH-----GKGWECCNNKCVNLMND 115
           R SRFLAE        K RNP AA HC+K+ ++C              CCNNKC++L  D
Sbjct: 51  RPSRFLAEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTD 110

BLAST of Bhi11G000427 vs. Swiss-Prot
Match: sp|Q9C6T5|STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g50720 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-06
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0

Query: 61  SGRLSRFLAEKTRNPR---AASHCHKNRKMCEK--MHGKGWECCNNKCVNLMNDKHNCG 115
           +GR+SRFLA+  +N R   AA HC+K  ++C+   M+     CC+NKCV+L  D  NCG
Sbjct: 48  TGRVSRFLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCG 106

BLAST of Bhi11G000427 vs. Swiss-Prot
Match: sp|Q9SZ28|STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.3e-06
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0

Query: 60  PSGRLSRFLAEK---TRNPRAASHCHKNRKMCEKMHGKG----WECCNNKCVNLMNDKHN 115
           P+ R +R LA+K    RNP AA HC++N ++C    G G      CCNNKC+++ +D +N
Sbjct: 43  PTIRPNRLLAQKEVGERNPNAADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNN 102

BLAST of Bhi11G000427 vs. Swiss-Prot
Match: sp|Q9FLQ0|STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-05
Identity = 28/65 (43.08%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 63  RLSRFLAE--------KTRNPRAASHCHKNRKMCEKMH-----GKGWECCNNKCVNLMND 115
           R SRFLAE        K RNP AA HC+K+ ++C              CCNNKC++L  D
Sbjct: 51  RPSRFLAEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTD 110

BLAST of Bhi11G000427 vs. TrEMBL
Match: tr|A0A1S3BLB8|A0A1S3BLB8_CUCME (stigma-specific STIG1-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103491076 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.2e-23
Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 0

Query: 52  STTMTKLEPSGRLSRFLAEK-TRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDK 111
           + TMTKLEPS  L RFLAEK TRNPRAASHCHKN++MCEK+HGKGW+CCNNKCVNLMND+
Sbjct: 53  TATMTKLEPSRSLGRFLAEKETRNPRAASHCHKNKQMCEKIHGKGWKCCNNKCVNLMNDR 112

Query: 112 HNCG 115
           HNCG
Sbjct: 113 HNCG 116

BLAST of Bhi11G000427 vs. TrEMBL
Match: tr|A0A0A0L4Y5|A0A0A0L4Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G067250 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 0

Query: 54  TMTKLEPSGRLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKHNC 113
           T T+LEPS  LSRFLAE  +NPRAASHCHKN+ MCEK+HGKGW+CCNNKCV+L  DKHNC
Sbjct: 55  TNTRLEPSRSLSRFLAEGMKNPRAASHCHKNKHMCEKIHGKGWKCCNNKCVDLTIDKHNC 114

Query: 114 GG 116
           GG
Sbjct: 115 GG 116

BLAST of Bhi11G000427 vs. TrEMBL
Match: tr|A0A2U1N150|A0A2U1N150_ARTAN (Stigma-specific Stig1 family protein OS=Artemisia annua OX=35608 GN=CTI12_AA301590 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 63  RLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKHNCG 115
           R+SRFLAE TRNPRAA HCHK+ ++C  + GK   CCNNKC++L  DKHNCG
Sbjct: 49  RVSRFLAE-TRNPRAADHCHKDNEICYYLEGKNSTCCNNKCMDLSEDKHNCG 99

BLAST of Bhi11G000427 vs. TrEMBL
Match: tr|A0A2U1L4T9|A0A2U1L4T9_ARTAN (Stigma-specific Stig1 family protein OS=Artemisia annua OX=35608 GN=CTI12_AA530140 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 63  RLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKHNCG 115
           R+SRFLAE TRNPRAA HCHK+ ++C  + GK   CCNNKC++L  DKHNCG
Sbjct: 45  RVSRFLAE-TRNPRAADHCHKDNEICYYLEGKNSTCCNNKCMDLSEDKHNCG 95

BLAST of Bhi11G000427 vs. TrEMBL
Match: tr|A0A1S3YVI0|A0A1S3YVI0_TOBAC (stigma-specific STIG1-like protein 2 OS=Nicotiana tabacum OX=4097 GN=LOC107780305 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 63  RLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKHNCG 115
           R SRFLAEK RNPRAA HCHK+ ++C  + G+   CCNNKC+NL  D H+CG
Sbjct: 51  RTSRFLAEKERNPRAADHCHKDNEICNVLEGRNSTCCNNKCINLGYDDHHCG 102

BLAST of Bhi11G000427 vs. NCBI nr
Match: XP_008449121.1 (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis melo])

HSP 1 Score: 117.9 bits (294), Expect = 3.3e-23
Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 0

Query: 52  STTMTKLEPSGRLSRFLAEK-TRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDK 111
           + TMTKLEPS  L RFLAEK TRNPRAASHCHKN++MCEK+HGKGW+CCNNKCVNLMND+
Sbjct: 53  TATMTKLEPSRSLGRFLAEKETRNPRAASHCHKNKQMCEKIHGKGWKCCNNKCVNLMNDR 112

Query: 112 HNCG 115
           HNCG
Sbjct: 113 HNCG 116

BLAST of Bhi11G000427 vs. NCBI nr
Match: XP_022151290.1 (stigma-specific STIG1-like protein 1 [Momordica charantia])

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-21
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0

Query: 52  STTMTKLEPSGRLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKH 111
           +TTM+ L  S  +SRFLA+  +NPR+ASHCHKN+KMCEKMHGKGWECCNNKCVNLMNDKH
Sbjct: 50  ATTMSLLSRS--VSRFLAQDVKNPRSASHCHKNKKMCEKMHGKGWECCNNKCVNLMNDKH 109

Query: 112 NCGG 116
           NCGG
Sbjct: 110 NCGG 111

BLAST of Bhi11G000427 vs. NCBI nr
Match: XP_004149335.2 (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus] >KGN56079.1 hypothetical protein Csa_3G067250 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 2.6e-20
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 0

Query: 54  TMTKLEPSGRLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKHNC 113
           T T+LEPS  LSRFLAE  +NPRAASHCHKN+ MCEK+HGKGW+CCNNKCV+L  DKHNC
Sbjct: 55  TNTRLEPSRSLSRFLAEGMKNPRAASHCHKNKHMCEKIHGKGWKCCNNKCVDLTIDKHNC 114

Query: 114 GG 116
           GG
Sbjct: 115 GG 116

BLAST of Bhi11G000427 vs. NCBI nr
Match: XP_023547467.1 (stigma-specific STIG1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 106.7 bits (265), Expect = 7.6e-20
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0

Query: 52  STTMTKLEPSGRLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKH 111
           +T  T L PS  LSRFLAEK +NPR+ASHC+KN+KMCE M+GKGW+CCNNKCV+L NDKH
Sbjct: 52  ATASTTLLPSRPLSRFLAEKEKNPRSASHCNKNKKMCETMYGKGWQCCNNKCVDLRNDKH 111

Query: 112 NCGG 116
           NCGG
Sbjct: 112 NCGG 115

BLAST of Bhi11G000427 vs. NCBI nr
Match: XP_022932264.1 (stigma-specific STIG1-like protein 3 [Cucurbita moschata])

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18
Identity = 45/56 (80.36%), Postives = 51/56 (91.07%), Query Frame = 0

Query: 56  TKLEPSGRLSRFLAEKTRNPRAASHCHKNRKMCEKMHGKGWECCNNKCVNLMNDKH 112
           T L PS  LSRFLAE+ +NPRAASHCHKN+KMCEKMHGKGWECCNNKCV++M+DKH
Sbjct: 42  TTLLPSRSLSRFLAEEVKNPRAASHCHKNKKMCEKMHGKGWECCNNKCVDVMHDKH 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G50720.11.4e-0745.76Stigma-specific Stig1 family protein[more]
AT4G26880.12.4e-0743.55Stigma-specific Stig1 family protein[more]
AT5G55110.12.6e-0643.08Stigma-specific Stig1 family protein[more]
Match NameE-valueIdentityDescription
sp|Q9C6T5|STGL3_ARATH2.5e-0645.76Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g5072... [more]
sp|Q9SZ28|STGL1_ARATH4.3e-0643.55Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g2688... [more]
sp|Q9FLQ0|STGL2_ARATH4.7e-0543.08Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g5511... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BLB8|A0A1S3BLB8_CUCME2.2e-2382.81stigma-specific STIG1-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103491076 PE=... [more]
tr|A0A0A0L4Y5|A0A0A0L4Y5_CUCSA1.7e-2077.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G067250 PE=4 SV=1[more]
tr|A0A2U1N150|A0A2U1N150_ARTAN1.6e-1065.38Stigma-specific Stig1 family protein OS=Artemisia annua OX=35608 GN=CTI12_AA3015... [more]
tr|A0A2U1L4T9|A0A2U1L4T9_ARTAN1.6e-1065.38Stigma-specific Stig1 family protein OS=Artemisia annua OX=35608 GN=CTI12_AA5301... [more]
tr|A0A1S3YVI0|A0A1S3YVI0_TOBAC2.1e-1061.54stigma-specific STIG1-like protein 2 OS=Nicotiana tabacum OX=4097 GN=LOC10778030... [more]
Match NameE-valueIdentityDescription
XP_008449121.13.3e-2382.81PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis melo][more]
XP_022151290.12.4e-2178.13stigma-specific STIG1-like protein 1 [Momordica charantia][more]
XP_004149335.22.6e-2077.42PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus] >KGN56079.1 hy... [more]
XP_023547467.17.6e-2073.44stigma-specific STIG1-like protein 1 [Cucurbita pepo subsp. pepo][more]
XP_022932264.11.1e-1880.36stigma-specific STIG1-like protein 3 [Cucurbita moschata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006969Stig1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000427Bhi11M000427mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006969Stigma-specific protein Stig1PFAMPF04885Stig1coord: 30..162
e-value: 1.3E-42
score: 145.5
IPR006969Stigma-specific protein Stig1PANTHERPTHR33227FAMILY NOT NAMEDcoord: 1..162
NoneNo IPR availablePANTHERPTHR33227:SF5STIGMA-SPECIFIC STIG1-LIKE PROTEIN 1-RELATEDcoord: 1..162