CmaCh16G001350 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G001350
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionC5a peptidase
LocationCma_Chr16 : 597497 .. 598698 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAGCCCATCGGAAAAGTGCATTTCATAATTCTTCTCCTTCTTCCAACTCCTGTCTGGTTCTTGATTTCGTATACTCCTACCCATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAATCGGAACCATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTGAGTTTAATGTTAGCGTCTTTTTGTCAGTCATTTTGCAGGTCTTTACGCCTTGTTTGGGTGCACGAATATAATGAACGCAAATAATAGGATTAGGGTTGGAGTAGTTCTTGGTTAACGTTAAAGGCGCATTATTTTCGTATATTTAGGTTTTTTTATTTATTTTATTTTTGACTCAAATGGACCGACCAACCAAACAGCGCCTAAACAACACGACTAAAGCGGGAATAGTGAATATTCCCTGTGAAGATATTTATGTGTGATTTATATATCACAATACTTTTTTTTTTTTTTTTTTTGTAATATTTTTTTGTTATTTATTTATTTTCTTTTTAATGACTTACGGCTATGATCCAGTAGGTACCAGAATGGACGGTAGATCTAGCAGGAGATCAAGACGGATACCATCTCTGCCGCACACTTCAATTCAAGATCAGGTCAGCGCAATATAAACATTACATTTCTTATTTCTTTCTTTTATTTTTCTCTACCAATAATAGAAATTATAAATATGTGCAATTCTTGTCTTTATTTCCTTTTAATCTTATCTTTTTCAATCAAAAGTATGCTCTTTTCGCGGCTTGTTTCAGCATTTGTTGTAATGCCACGTGGATATAAACTAATAAGTTATTTAGGTTTAATTAAATTTAAATACAAATTTTTCTCAAGTATTTGATATTTTAAACAATAATATAGATATTTATAGTTACATTATTAAAATAATAAAATGGCATGCTTATGTGGTAATGGCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCTTGTCACCTGTCAACTAATAAATATAATATTAATTATTATTATTATTTCAGCTACATTTTTTTTTTCCATTTAGTTTCTTCATTTAATCCTCGC

mRNA sequence

CCAAGCCCATCGGAAAAGTGCATTTCATAATTCTTCTCCTTCTTCCAACTCCTGTCTGGTTCTTGATTTCGTATACTCCTACCCATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAATCGGAACCATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTACCAGAATGGACGGTAGATCTAGCAGGAGATCAAGACGGATACCATCTCTGCCGCACACTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCTTGTCACCTGTCAACTAATAAATATAATATTAATTATTATTATTATTTCAGCTACATTTTTTTTTTCCATTTAGTTTCTTCATTTAATCCTCGC

Coding sequence (CDS)

ATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAATCGGAACCATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTACCAGAATGGACGGTAGATCTAGCAGGAGATCAAGACGGATACCATCTCTGCCGCACACTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCTTGTCACCTGTCAACTAA

Protein sequence

MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSPVN
Homology
[Close]
BLAST of CmaCh16G001350 vs. TrEMBL
Match: A0A0A0L5V0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G181960 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.2e-42
Identity = 93/122 (76.23%), Postives = 106/122 (86.89%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60
           MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRR LRLDR L DTADSTLDS
Sbjct: 1   MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDS 60

Query: 61  PQKNRKKHSISGT-RMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSP 120
           P  + K H  SG+ R++GRS+RRSRRI S P+TS QDQVVPQME+RAVEDEDERDHP+SP
Sbjct: 61  PHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120

Query: 121 VN 122
           +N
Sbjct: 121 LN 122

[Close]
BLAST of CmaCh16G001350 vs. TrEMBL
Match: M5XL93_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013533mg PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60
           M+SHVQ S  K  WT+EKH+ FLNSMEASFVR+MF+ ++HR  LRLDR+L DT+DSTLD 
Sbjct: 1   MQSHVQ-SGKKRSWTDEKHVQFLNSMEASFVRAMFEKKDHRL-LRLDRYLPDTSDSTLDL 60

Query: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDH 116
              N+ K    G RMDG + +R RR  S P  + QDQVVPQ E RAV D+DERDH
Sbjct: 61  KTLNKTKKQ--GGRMDGGADKRLRRFSSQPFNASQDQVVPQFEMRAVGDKDERDH 111

[Close]
BLAST of CmaCh16G001350 vs. TrEMBL
Match: A0A061G1R7_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_015122 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-22
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLD- 60
           M+SHV      P WTNEKH+HFLNSMEA FVR+M +N + R  LRLDRHL D+++STLD 
Sbjct: 1   MDSHVPSDRNDP-WTNEKHVHFLNSMEAWFVRTMLEN-DGRHNLRLDRHLPDSSESTLDC 60

Query: 61  SPQKNRKKHSIS------GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDER 120
            P + RKKH+ S      G++  GR  +R+RR PS PH S QDQVVPQ+E R   D+DE 
Sbjct: 61  KPNQTRKKHATSDFIGTTGSKRKGRPDKRARRPPSKPHDSSQDQVVPQIENR-TGDKDEE 120

[Close]
BLAST of CmaCh16G001350 vs. TrEMBL
Match: A0A061G0Q6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_015122 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-22
Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLD- 60
           M+SHV      P WTNEKH+HFLNSMEA FVR+M +N + R  LRLDRHL D+++STLD 
Sbjct: 1   MDSHVPSDRNDP-WTNEKHVHFLNSMEAWFVRTMLEN-DGRHNLRLDRHLPDSSESTLDC 60

Query: 61  SPQKNRKKHSIS-------GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDE 120
            P + RKKH+ S       G++  GR  +R+RR PS PH S QDQVVPQ+E R   D+DE
Sbjct: 61  KPNQTRKKHATSVDFIGTTGSKRKGRPDKRARRPPSKPHDSSQDQVVPQIENR-TGDKDE 120

[Close]
BLAST of CmaCh16G001350 vs. TrEMBL
Match: A0A067JRZ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26135 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-18
Identity = 62/121 (51.24%), Postives = 83/121 (68.60%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60
           M+ HV  ++T   WTNEKH+HF+NSMEA+FVR+M +N    R LRLDR+L D+++STLD 
Sbjct: 1   MDPHVASNQTDGQWTNEKHLHFINSMEATFVRTMLENNG--RFLRLDRYLPDSSESTLDL 60

Query: 61  PQKNRKKHSISG------TRMDGRSSRRSRRIPSLPH-TSIQDQVVPQMEERAVEDEDER 115
             +  KKH IS       +RMDGR+ R++R++ S  H  S QDQVVPQ+E R    +DER
Sbjct: 61  KSQRPKKHKISDHMVGPRSRMDGRTDRKARKLSSHRHDPSQQDQVVPQLENRG-GVKDER 118

[Close]
BLAST of CmaCh16G001350 vs. NCBI nr
Match: gi|449446043|ref|XP_004140781.1| (PREDICTED: uncharacterized protein LOC101217506 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 1.0e-41
Identity = 93/122 (76.23%), Postives = 106/122 (86.89%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60
           MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRR LRLDR L DTADSTLDS
Sbjct: 1   MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDS 60

Query: 61  PQKNRKKHSISGT-RMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSP 120
           P  + K H  SG+ R++GRS+RRSRRI S P+TS QDQVVPQME+RAVEDEDERDHP+SP
Sbjct: 61  PHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120

Query: 121 VN 122
           +N
Sbjct: 121 LN 122

[Close]
BLAST of CmaCh16G001350 vs. NCBI nr
Match: gi|659077415|ref|XP_008439192.1| (PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-41
Identity = 93/122 (76.23%), Postives = 105/122 (86.07%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60
           MESHVQF++T P WTNEKHMHFLNSMEASFVRSMF+NR HRRRLRLDR L DTADSTLDS
Sbjct: 1   MESHVQFTQTGPSWTNEKHMHFLNSMEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDS 60

Query: 61  PQKNRKKHSISGT-RMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSP 120
           P  + K H  SG+ RM+GRS+RRSRR  S P++S QDQVVPQME+ AVEDEDERDHP+SP
Sbjct: 61  PLNHTKNHPTSGSARMNGRSTRRSRRTSSPPYSSTQDQVVPQMEKIAVEDEDERDHPMSP 120

Query: 121 VN 122
           +N
Sbjct: 121 LN 122

[Close]
BLAST of CmaCh16G001350 vs. NCBI nr
Match: gi|596011467|ref|XP_007218616.1| (hypothetical protein PRUPE_ppa013533mg [Prunus persica])

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-22
Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60
           M+SHVQ S  K  WT+EKH+ FLNSMEASFVR+MF+ ++HR  LRLDR+L DT+DSTLD 
Sbjct: 1   MQSHVQ-SGKKRSWTDEKHVQFLNSMEASFVRAMFEKKDHRL-LRLDRYLPDTSDSTLDL 60

Query: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDH 116
              N+ K    G RMDG + +R RR  S P  + QDQVVPQ E RAV D+DERDH
Sbjct: 61  KTLNKTKKQ--GGRMDGGADKRLRRFSSQPFNASQDQVVPQFEMRAVGDKDERDH 111

[Close]
BLAST of CmaCh16G001350 vs. NCBI nr
Match: gi|590672524|ref|XP_007038636.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-22
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLD- 60
           M+SHV      P WTNEKH+HFLNSMEA FVR+M +N + R  LRLDRHL D+++STLD 
Sbjct: 1   MDSHVPSDRNDP-WTNEKHVHFLNSMEAWFVRTMLEN-DGRHNLRLDRHLPDSSESTLDC 60

Query: 61  SPQKNRKKHSIS------GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDER 120
            P + RKKH+ S      G++  GR  +R+RR PS PH S QDQVVPQ+E R   D+DE 
Sbjct: 61  KPNQTRKKHATSDFIGTTGSKRKGRPDKRARRPPSKPHDSSQDQVVPQIENR-TGDKDEE 120

[Close]
BLAST of CmaCh16G001350 vs. NCBI nr
Match: gi|590672520|ref|XP_007038635.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 112.1 bits (279), Expect = 6.9e-22
Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLD- 60
           M+SHV      P WTNEKH+HFLNSMEA FVR+M +N + R  LRLDRHL D+++STLD 
Sbjct: 1   MDSHVPSDRNDP-WTNEKHVHFLNSMEAWFVRTMLEN-DGRHNLRLDRHLPDSSESTLDC 60

Query: 61  SPQKNRKKHSIS-------GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDE 120
            P + RKKH+ S       G++  GR  +R+RR PS PH S QDQVVPQ+E R   D+DE
Sbjct: 61  KPNQTRKKHATSVDFIGTTGSKRKGRPDKRARRPPSKPHDSSQDQVVPQIENR-TGDKDE 120

The following BLAST results are available for this feature:
BLAST of CmaCh16G001350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh16G001350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5V0_CUCSA7.2e-4276.23Uncharacterized protein OS=Cucumis sativus GN=Csa_3G181960 PE=4 SV=1[more]
M5XL93_PRUPE1.3e-2260.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013533mg PE=4 SV=1[more]
A0A061G1R7_THECC3.7e-2255.12Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_015122 PE=4 SV=1[more]
A0A061G0Q6_THECC4.8e-2254.69Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_015122 PE=4 SV=1[more]
A0A067JRZ4_JATCU5.5e-1851.24Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26135 PE=4 SV=1[more]
BLAST of CmaCh16G001350 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh16G001350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446043|ref|XP_004140781.1|1.0e-4176.23PREDICTED: uncharacterized protein LOC101217506 [Cucumis sativus][more]
gi|659077415|ref|XP_008439192.1|5.1e-4176.23PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo][more]
gi|596011467|ref|XP_007218616.1|1.8e-2260.00hypothetical protein PRUPE_ppa013533mg [Prunus persica][more]
gi|590672524|ref|XP_007038636.1|5.3e-2255.12Uncharacterized protein isoform 2 [Theobroma cacao][more]
gi|590672520|ref|XP_007038635.1|6.9e-2254.69Uncharacterized protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G001350.1CmaCh16G001350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33676FAMILY NOT NAMEDcoord: 13..112
score: 7.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G001350Cucsa.107630Cucumber (Gy14) v1cgycmaB0248
CmaCh16G001350Cla006193Watermelon (97103) v1cmawmB316
CmaCh16G001350Csa3G181960Cucumber (Chinese Long) v2cmacuB329
CmaCh16G001350MELO3C006894Melon (DHL92) v3.5.1cmameB296
CmaCh16G001350ClCG05G007940Watermelon (Charleston Gray)cmawcgB296
CmaCh16G001350CSPI03G16800Wild cucumber (PI 183967)cmacpiB335
CmaCh16G001350CmoCh18G012610Cucurbita moschata (Rifu)cmacmoB327
CmaCh16G001350CmoCh16G001400Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G001350Lsi05G012430Bottle gourd (USVL1VR-Ls)cmalsiB312
CmaCh16G001350Cp4.1LG09g00830Cucurbita pepo (Zucchini)cmacpeB339
CmaCh16G001350MELO3C006894.2Melon (DHL92) v3.6.1cmamedB344
CmaCh16G001350CsaV3_3G016970Cucumber (Chinese Long) v3cmacucB0383
CmaCh16G001350Cla97C05G089940Watermelon (97103) v2cmawmbB346
CmaCh16G001350Bhi01G000976Wax gourdcmawgoB0433
CmaCh16G001350CsGy3G016890Cucumber (Gy14) v2cgybcmaB342
CmaCh16G001350Carg15141Silver-seed gourdcarcmaB1366
CmaCh16G001350Carg22090Silver-seed gourdcarcmaB1031
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G001350CmaCh18G012380Cucurbita maxima (Rimu)cmacmaB338
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G001350Watermelon (97103) v2cmawmbB330
CmaCh16G001350Watermelon (97103) v2cmawmbB344
CmaCh16G001350Wax gourdcmawgoB0429
CmaCh16G001350Cucurbita maxima (Rimu)cmacmaB345
CmaCh16G001350Cucurbita maxima (Rimu)cmacmaB346
CmaCh16G001350Cucurbita maxima (Rimu)cmacmaB359
CmaCh16G001350Cucumber (Gy14) v1cgycmaB0832
CmaCh16G001350Cucurbita moschata (Rifu)cmacmoB333
CmaCh16G001350Wild cucumber (PI 183967)cmacpiB348
CmaCh16G001350Cucumber (Chinese Long) v2cmacuB344
CmaCh16G001350Melon (DHL92) v3.5.1cmameB285
CmaCh16G001350Watermelon (Charleston Gray)cmawcgB292
CmaCh16G001350Watermelon (97103) v1cmawmB320
CmaCh16G001350Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G001350Cucurbita pepo (Zucchini)cmacpeB358
CmaCh16G001350Cucurbita pepo (Zucchini)cmacpeB361
CmaCh16G001350Bottle gourd (USVL1VR-Ls)cmalsiB302
CmaCh16G001350Bottle gourd (USVL1VR-Ls)cmalsiB320
CmaCh16G001350Cucumber (Gy14) v2cgybcmaB621
CmaCh16G001350Melon (DHL92) v3.6.1cmamedB338
CmaCh16G001350Silver-seed gourdcarcmaB0994
CmaCh16G001350Silver-seed gourdcarcmaB1264
CmaCh16G001350Cucumber (Chinese Long) v3cmacucB0376
CmaCh16G001350Cucumber (Chinese Long) v3cmacucB0406