Carg15141 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15141
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	C5a peptidase
Location	Cucurbita_argyrosperma_scaffold_078 : 735066 .. 736104 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCTTCTCCTTCTTCCAACTCCTGTTTGGTTCTTGATTTCGTATACTCCTACCCATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAATCGGAACTATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTGAGTTTAATGTTAGCGTTTTTTTTTGTCAGTCATTTTGTACGCCTTTAAGCCTTGTTTGGATGCACGAATATAATGAACGCGAATAATAGGATTAGGGTTGGAGTAGTTCTTGGTTAACGTTAAAGACGCATTATTTTCCTATATTTGGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTTATTTTGACTCAAATGGACCAACCAACCAAACAGCGCCTAAACAACACGACTAAAGCGGGAATAGTGAATATTCCCTGTGAAGATATTTATGTGTGATTTATATATCACAATAAAAATCAATTTTCTTTTTTGTTATTTATTTATTTATTTTCTTTTTAATGACTTACGGCTATGATCCAGTAGGTACCAGAATGGACGGTAGATCTAGCAGAAGATCAAGACGGATACCATCTCTACCGCACACTTCAATTCAAGATCAGGTCATTATAAATATGTGCAACTCTCGTCTTTATTTCCTTTTAATCTTATCTTTTTCAATCAAAATTATGCTCTTTTTGCGGCTTATTTCAGCATTTGTTGTAATGCCACGTGGATATAAACTAATAACTTATTTAGGTTTAATTAAATTTAAATACAAAATTTTCTCAAGTATTTGATATTTTAAACAATAATATAATATTTATAGTCAAATTATTAAAATAAAATGGCATGCTTATGTGGCACGGCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAA

mRNA sequence

AATTCTTCTCCTTCTTCCAACTCCTGTTTGGTTCTTGATTTCGTATACTCCTACCCATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAATCGGAACTATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTACCAGAATGGACGGTAGATCTAGCAGAAGATCAAGACGGATACCATCTCTACCGCACACTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAA

Coding sequence (CDS)

ATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAATCGGAACTATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTACCAGAATGGACGGTAGATCTAGCAGAAGATCAAGACGGATACCATCTCTACCGCACACTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAA

Protein sequence

MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPVN

Homology

[Close]

BLAST of Carg15141 vs. NCBI nr
Match: XP_022923140.1 (uncharacterized protein LOC111430892 isoform X2 [Cucurbita moschata])

HSP 1 Score: 236.9 bits (603), Expect = 3.6e-59
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDS 60

Query: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPV 120
           PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPV
Sbjct: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPV 120

Query: 121 N 122
           N
Sbjct: 121 N 121

[Close]

BLAST of Carg15141 vs. NCBI nr
Match: XP_022984701.1 (uncharacterized protein LOC111482903 isoform X2 [Cucurbita maxima])

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-58
Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRLRLDRHLSDTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60

Query: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPV 120
           PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHP+SPV
Sbjct: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSPV 120

Query: 121 N 122
           N
Sbjct: 121 N 121

[Close]

BLAST of Carg15141 vs. NCBI nr
Match: XP_022923139.1 (uncharacterized protein LOC111430892 isoform X1 [Cucurbita moschata])

HSP 1 Score: 232.3 bits (591), Expect = 9.0e-58
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDS 60

Query: 61  PQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSP 120
           PQKNRKKHSIS GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSP
Sbjct: 61  PQKNRKKHSISVGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSP 120

Query: 121 VN 122
           VN
Sbjct: 121 VN 122

[Close]

BLAST of Carg15141 vs. NCBI nr
Match: XP_023552559.1 (uncharacterized protein LOC111810184 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RR LRLDRHLSDTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRLLRLDRHLSDTADSTLDS 60

Query: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPV 120
           P KNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPV
Sbjct: 61  PHKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSPV 120

Query: 121 N 122
           N
Sbjct: 121 N 121

[Close]

BLAST of Carg15141 vs. NCBI nr
Match: XP_022984699.1 (uncharacterized protein LOC111482903 isoform X1 [Cucurbita maxima])

HSP 1 Score: 230.7 bits (587), Expect = 2.6e-57
Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRLRLDRHLSDTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60

Query: 61  PQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSP 120
           PQKNRKKHSIS GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHP+SP
Sbjct: 61  PQKNRKKHSISVGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSP 120

Query: 121 VN 122
           VN
Sbjct: 121 VN 122

[Close]

BLAST of Carg15141 vs. TrEMBL
Match: tr|A0A0A0L5V0|A0A0A0L5V0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181960 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 93/122 (76.23%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR +RR LRLDR L DTADSTLDS
Sbjct: 1   MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDS 60

Query: 61  PQKNRKKHSISGT-RMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSP 120
           P  + K H  SG+ R++GRS+RRSRRI S P+TS QDQVVPQME+RAVEDEDERDHPMSP
Sbjct: 61  PHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120

Query: 121 VN 122
           +N
Sbjct: 121 LN 122

[Close]

BLAST of Carg15141 vs. TrEMBL
Match: tr|A0A1S3AYV4|A0A1S3AYV4_CUCME (uncharacterized protein LOC103484063 OS=Cucumis melo OX=3656 GN=LOC103484063 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24
Identity = 71/122 (58.20%), Postives = 79/122 (64.75%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           MESHVQF++T P WTNEKHMHFLNSMEASFVRSMF+NR +RRRLRLDR L DTA      
Sbjct: 1   MESHVQFTQTGPSWTNEKHMHFLNSMEASFVRSMFQNRAHRRRLRLDRLLPDTAXXXXXX 60

Query: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSL-PHTSIQDQVVPQMEERAVEDEDERDHPMSP 120
                                         P++S QDQVVPQME+ AVEDEDERDHPMSP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPYSSTQDQVVPQMEKIAVEDEDERDHPMSP 120

Query: 121 VN 122
           +N
Sbjct: 121 LN 122

[Close]

BLAST of Carg15141 vs. TrEMBL
Match: tr|A0A061G1R7|A0A061G1R7_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_015122 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-22
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLD- 60
           M+SHV      P WTNEKH+HFLNSMEA FVR+M +N + R  LRLDRHL D+++STLD 
Sbjct: 1   MDSHVPSDRNDP-WTNEKHVHFLNSMEAWFVRTMLEN-DGRHNLRLDRHLPDSSESTLDC 60

Query: 61  SPQKNRKKHSIS------GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDER 120
            P + RKKH+ S      G++  GR  +R+RR PS PH S QDQVVPQ+E R   D+DE 
Sbjct: 61  KPNQTRKKHATSDFIGTTGSKRKGRPDKRARRPPSKPHDSSQDQVVPQIENR-TGDKDEE 120

[Close]

BLAST of Carg15141 vs. TrEMBL
Match: tr|M5XL93|M5XL93_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292300 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.9e-22
Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDS 60
           M+SHVQ S  K  WT+EKH+ FLNSMEASFVR+MF+ +++ R LRLDR+L DT+DSTLD 
Sbjct: 1   MQSHVQ-SGKKRSWTDEKHVQFLNSMEASFVRAMFEKKDH-RLLRLDRYLPDTSDSTLDL 60

Query: 61  PQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDH 116
              N+ K    G RMDG + +R RR  S P  + QDQVVPQ E RAV D+DERDH
Sbjct: 61  KTLNKTKK--QGGRMDGGADKRLRRFSSQPFNASQDQVVPQFEMRAVGDKDERDH 111

[Close]

BLAST of Carg15141 vs. TrEMBL
Match: tr|A0A061G0Q6|A0A061G0Q6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_015122 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.9e-22
Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLD- 60
           M+SHV      P WTNEKH+HFLNSMEA FVR+M +N + R  LRLDRHL D+++STLD 
Sbjct: 1   MDSHVPSDRNDP-WTNEKHVHFLNSMEAWFVRTMLEN-DGRHNLRLDRHLPDSSESTLDC 60

Query: 61  SPQKNRKKHSIS-------GTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDE 120
            P + RKKH+ S       G++  GR  +R+RR PS PH S QDQVVPQ+E R   D+DE
Sbjct: 61  KPNQTRKKHATSVDFIGTTGSKRKGRPDKRARRPPSKPHDSSQDQVVPQIENR-TGDKDE 120

The following BLAST results are available for this feature:

BLAST of Carg15141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923140.1	3.6e-59	99.17	uncharacterized protein LOC111430892 isoform X2 [Cucurbita moschata]	[more]
XP_022984701.1	1.1e-58	98.35	uncharacterized protein LOC111482903 isoform X2 [Cucurbita maxima]	[more]
XP_022923139.1	9.0e-58	98.36	uncharacterized protein LOC111430892 isoform X1 [Cucurbita moschata]	[more]
XP_023552559.1	1.2e-57	97.52	uncharacterized protein LOC111810184 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022984699.1	2.6e-57	97.54	uncharacterized protein LOC111482903 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg15141 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg15141 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15141 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5V0\|A0A0A0L5V0_CUCSA	3.0e-41	76.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181960 PE=4 SV=1	[more]
tr\|A0A1S3AYV4\|A0A1S3AYV4_CUCME	3.3e-24	58.20	uncharacterized protein LOC103484063 OS=Cucumis melo OX=3656 GN=LOC103484063 PE=...	[more]
tr\|A0A061G1R7\|A0A061G1R7_THECC	6.8e-22	55.12	Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_015122 PE=4 ...	[more]
tr\|M5XL93\|M5XL93_PRUPE	8.9e-22	59.13	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292300 PE=4 SV=1	[more]
tr\|A0A061G0Q6\|A0A061G0Q6_THECC	8.9e-22	54.69	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_015122 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15141-RA	Carg15141-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..121
None	No IPR available	PANTHER	PTHR33676	FAMILY NOT NAMED	coord: 4..112
None	No IPR available	PANTHER	PTHR33676:SF2	SUBFAMILY NOT NAMED	coord: 4..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15141	Cla006193	Watermelon (97103) v1	carwmB0990
Carg15141	Csa3G181960	Cucumber (Chinese Long) v2	carcuB1004
Carg15141	MELO3C006894	Melon (DHL92) v3.5.1	carmeB0966
Carg15141	ClCG05G007940	Watermelon (Charleston Gray)	carwcgB0965
Carg15141	CSPI03G16800	Wild cucumber (PI 183967)	carcpiB1027
Carg15141	Cucsa.107630	Cucumber (Gy14) v1	carcgyB1105
Carg15141	CmaCh18G012380	Cucurbita maxima (Rimu)	carcmaB1368
Carg15141	CmaCh16G001350	Cucurbita maxima (Rimu)	carcmaB1366
Carg15141	CmoCh16G001400	Cucurbita moschata (Rifu)	carcmoB1326
Carg15141	CmoCh18G012610	Cucurbita moschata (Rifu)	carcmoB1328
Carg15141	Lsi05G012430	Bottle gourd (USVL1VR-Ls)	carlsiB903
Carg15141	Cp4.1LG09g00830	Cucurbita pepo (Zucchini)	carcpeB1373
Carg15141	CsGy3G016890	Cucumber (Gy14) v2	carcgybB0976
Carg15141	MELO3C006894.2	Melon (DHL92) v3.6.1	carmedB0975
Carg15141	CsaV3_3G016970	Cucumber (Chinese Long) v3	carcucB1032
Carg15141	Cla97C05G089940	Watermelon (97103) v2	carwmbB1042
Carg15141	Bhi01G000976	Wax gourd	carwgoB1159

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15141	Carg22090	Silver-seed gourd	carcarB594

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15141	Cucurbita pepo (Zucchini)	carcpeB1376