CmaCh15G011110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G011110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	3-isopropylmalate dehydratase, small subunit
Location	Cma_Chr15 : 7066287 .. 7067057 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGCAGCCTTTGTGTCTGTAAGCCCTTTCGCCACTTCCACTCCCCGATCGTCTCCCTCCATTTCCCATCTCTCACCTCCTCGAACCATCAAATTTCCCACTTTTTATTCCAATTTTCTCAATGATCTCTCCACCACTGTCTCCCACGCGCCGTCACGTGCTGCAATTATTCTCCCTCGAGCAACCGCTACACCGTCCTACGCCGTTTCTTCAAGCACCGTATTTCACGGCTTCTGCTATGTCGTCGGAGACAACATCGACACGGACCAGATTATTCCGGCTGAGTACTTAACCTTGGTCCCTTCAAATCCCAGCGAGTACGAGAAGCTCGGATCTCACGCCCTAGTTGGCCTTCCTTCCTCTTATTCCACACGCTTCGTGGAATCTAACGAGATGAAGACCAAATACAGTATCATAATTGCCGGCGACAACTTCGGTTGCGGTTCTTCACGGGAGCATGCGCCGGTTGCGTTGGGAGCATCCGGTGCGGTGGCTGTGGTTGCTGAATCGTATGCGCGTATATTCTTCAGAAACTCGGTAGCGACTGGAGAGATTTATCCCTTGGAATCGGAAATTAGGATCTGCGATGAATGTAAGACTGGCGATGTGGTGACTATAGAGCTCGCAGATAGCCGCTTGATCAACCACACGAGGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTCATCCAGGCTGGAGGGATCTTCGCATATGCAAGGAAGACGGGTATGATTCCAAGCCATGCGCAGTGA

mRNA sequence

ATGGCGACTGCAGCCTTTGTGTCTGTAAGCCCTTTCGCCACTTCCACTCCCCGATCGTCTCCCTCCATTTCCCATCTCTCACCTCCTCGAACCATCAAATTTCCCACTTTTTATTCCAATTTTCTCAATGATCTCTCCACCACTGTCTCCCACGCGCCGTCACGTGCTGCAATTATTCTCCCTCGAGCAACCGCTACACCGTCCTACGCCGTTTCTTCAAGCACCGTATTTCACGGCTTCTGCTATGTCGTCGGAGACAACATCGACACGGACCAGATTATTCCGGCTGAGTACTTAACCTTGGTCCCTTCAAATCCCAGCGAGTACGAGAAGCTCGGATCTCACGCCCTAGTTGGCCTTCCTTCCTCTTATTCCACACGCTTCGTGGAATCTAACGAGATGAAGACCAAATACAGTATCATAATTGCCGGCGACAACTTCGGTTGCGGTTCTTCACGGGAGCATGCGCCGGTTGCGTTGGGAGCATCCGGTGCGGTGGCTGTGGTTGCTGAATCGTATGCGCGTATATTCTTCAGAAACTCGGTAGCGACTGGAGAGATTTATCCCTTGGAATCGGAAATTAGGATCTGCGATGAATGTAAGACTGGCGATGTGGTGACTATAGAGCTCGCAGATAGCCGCTTGATCAACCACACGAGGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTCATCCAGGCTGGAGGGATCTTCGCATATGCAAGGAAGACGGGTATGATTCCAAGCCATGCGCAGTGA

Coding sequence (CDS)

ATGGCGACTGCAGCCTTTGTGTCTGTAAGCCCTTTCGCCACTTCCACTCCCCGATCGTCTCCCTCCATTTCCCATCTCTCACCTCCTCGAACCATCAAATTTCCCACTTTTTATTCCAATTTTCTCAATGATCTCTCCACCACTGTCTCCCACGCGCCGTCACGTGCTGCAATTATTCTCCCTCGAGCAACCGCTACACCGTCCTACGCCGTTTCTTCAAGCACCGTATTTCACGGCTTCTGCTATGTCGTCGGAGACAACATCGACACGGACCAGATTATTCCGGCTGAGTACTTAACCTTGGTCCCTTCAAATCCCAGCGAGTACGAGAAGCTCGGATCTCACGCCCTAGTTGGCCTTCCTTCCTCTTATTCCACACGCTTCGTGGAATCTAACGAGATGAAGACCAAATACAGTATCATAATTGCCGGCGACAACTTCGGTTGCGGTTCTTCACGGGAGCATGCGCCGGTTGCGTTGGGAGCATCCGGTGCGGTGGCTGTGGTTGCTGAATCGTATGCGCGTATATTCTTCAGAAACTCGGTAGCGACTGGAGAGATTTATCCCTTGGAATCGGAAATTAGGATCTGCGATGAATGTAAGACTGGCGATGTGGTGACTATAGAGCTCGCAGATAGCCGCTTGATCAACCACACGAGGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTCATCCAGGCTGGAGGGATCTTCGCATATGCAAGGAAGACGGGTATGATTCCAAGCCATGCGCAGTGA

Protein sequence

MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGMIPSHAQ

Homology

[Close]

BLAST of CmaCh15G011110 vs. Swiss-Prot
Match: LEUD3_ARATH (3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana GN=At2g43090 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.5e-85
Identity = 168/253 (66.40%), Postives = 192/253 (75.89%), Query Frame = 1


Query: 13  ATSTPRSSPSISHL--SPPRTIKFPTFYSNFLNDLSTTVSH------APSRAAIILPRAT 72
           A S   ++P++S    SP +   F TF S FL   ST+V+       +   ++  + R+ 
Sbjct: 2   AASLQSANPTLSRTLASPNKPSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSA 61

Query: 73  ATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSY 132
           A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGS+ALVGLP+SY
Sbjct: 62  AEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASY 121

Query: 133 STRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVAT 192
             RFV+  EMKTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRNSVAT
Sbjct: 122 KERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRNSVAT 181

Query: 193 GEIYPLESEIRICDECKTGDVVTIEL--ADSRLINHTRGKEYKLKPIGDAGPVIQAGGIF 252
           GE+YPL+SE+R+CDEC TGDV T+EL   DS LINHT GKEYKLKPIGDAGPVI AGGIF
Sbjct: 182 GEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIF 241

Query: 253 AYARKTGMIPSHA 256
           AYARK GMIPS A
Sbjct: 242 AYARKAGMIPSAA 250

[Close]

BLAST of CmaCh15G011110 vs. Swiss-Prot
Match: LEUD2_ARATH (3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana GN=IPMI1 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 6.1e-76
Identity = 152/219 (69.41%), Postives = 170/219 (77.63%), Query Frame = 1


Query: 42  LNDLSTTVSHAP--SRAAIILPRATATPSYAVSSST--VFHGFCYVVGDNIDTDQIIPAE 101
           L   ST  ++ P  S +A I+ R  A+ S +  S T   FHG C+V+ DNIDTDQIIPAE
Sbjct: 34  LKSASTIFNYKPLTSSSATIITRVAASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAE 93

Query: 102 YLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAP 161
           Y TL+PS P + EKLGS AL GLP  Y+ RFV   EMK+KYS+II GDNFGCGSSREHAP
Sbjct: 94  YGTLIPSIPEDREKLGSFALNGLPKFYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAP 153

Query: 162 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELAD---SR 221
           V LGA+GA AVVAESYARIFFRN VATGEI+PLESE+RICDECKTGDVVTIE  +   S 
Sbjct: 154 VCLGAAGAKAVVAESYARIFFRNCVATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSL 213

Query: 222 LINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGMIPS 254
           LINHT  KEYKLKP+GDAGPVI AGGIFAYARK GMIPS
Sbjct: 214 LINHTTRKEYKLKPLGDAGPVIDAGGIFAYARKAGMIPS 252

[Close]

BLAST of CmaCh15G011110 vs. Swiss-Prot
Match: LEUD1_ARATH (3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana GN=IPMI2 PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-70
Identity = 148/255 (58.04%), Postives = 179/255 (70.20%), Query Frame = 1


Query: 8   SVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDL---STTVSHAPSRAAIILPRAT 67
           S+  F  + P SS   S  S   T + P    N    L   S +++   + +  I+PRA 
Sbjct: 4   SLPTFPQALPCSSTKTS--SSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAA 63

Query: 68  ATPSYA--VSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPS 127
           A+ S +    ++T FHG CYV+ DNIDTDQIIPA      PSN  E +++ +HAL GLP 
Sbjct: 64  ASESDSNEALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPD 123

Query: 128 SYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 187
            + TRF+E  E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSV
Sbjct: 124 FHKTRFIEPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSV 183

Query: 188 ATGEIYPLESEIRICDECKTGDVVTIELADS--RLINHTRGKEYKLKPIGDAGPVIQAGG 247
           ATGE++PLESE+R+C+ECKTGD VTIEL+DS   L NHT GK YKLK IGDAGPVI AGG
Sbjct: 184 ATGEVFPLESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGG 243

Query: 248 IFAYARKTGMIPSHA 256
           IFAYAR  GMIPS A
Sbjct: 244 IFAYARMMGMIPSLA 256

[Close]

BLAST of CmaCh15G011110 vs. Swiss-Prot
Match: LEUD_THEYD (3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuD PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.7e-28
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 1


Query: 79  GFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKY 138
           G  +  GDNIDTD IIPA YL     N S+ ++L  H +    SS+ ++    +      
Sbjct: 5   GKVWKFGDNIDTDAIIPARYL-----NTSDPKELAKHVMEDADSSFPSKVKPGD------ 64

Query: 139 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 198
            IIIAG NFGCGSSREHAP+A+ ASG  AV+A+SYARIFFRN+   G   P+     + D
Sbjct: 65  -IIIAGRNFGCGSSREHAPIAIKASGIRAVIAKSYARIFFRNAFNIG--LPIFEVPELID 124

Query: 199 ECKTGDVVTIELADSRLINHTRGKEYKLKPIGD-AGPVIQAGGIFAYARK 248
           E   GD V I++   ++IN T+GK+Y  KPI      +I+AGG+  + +K
Sbjct: 125 ETNEGDEVEIDMNSGQIINLTKGKKYNTKPIPPFMQELIKAGGLVEWTKK 160

[Close]

BLAST of CmaCh15G011110 vs. Swiss-Prot
Match: LEUD2_THEMA (3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=leuD2 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26
Identity = 69/170 (40.59%), Postives = 105/170 (61.76%), Query Frame = 1


Query: 79  GFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKY 138
           G  +V GDN++TD+IIPA YL     N S+ ++L  + +      +  R         K 
Sbjct: 7   GKVFVFGDNVNTDEIIPARYL-----NTSDPQELAKYCMEDARPGFGRRD------DIKG 66

Query: 139 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 198
           SII+AG+NFGCGSSREHAPVA+ A+G   V+A+S+ARIFFRN++  G   P+  E++  D
Sbjct: 67  SIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEAD 126

Query: 199 ECKTGDVVTIELADSRLINHTRGKEYKLKPIGD-AGPVIQAGGIFAYARK 248
           E + GD+  ++L +  + N T+GKEY+++P  +    +++AGG   Y  K
Sbjct: 127 EFEEGDIAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 162

[Close]

BLAST of CmaCh15G011110 vs. TrEMBL
Match: A0A0A0KPB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165170 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-111
Identity = 213/253 (84.19%), Postives = 228/253 (90.12%), Query Frame = 1


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MA + F+S SP A STPRSSPSIS LS P+T+KF + +SNFL +LS  VSHAPSR A I+
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA+PS     ST FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGS+AL+GL
Sbjct: 61  PRATASPS-----STAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTR+VES EMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESE RIC+ECKTGDVVTIELA+SRLINHT GKEYKLKPIGDAGPVI+AGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 248

[Close]

BLAST of CmaCh15G011110 vs. TrEMBL
Match: A0A0D2V4U1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G137200 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.5e-94
Identity = 181/246 (73.58%), Postives = 206/246 (83.74%), Query Frame = 1


Query: 13  ATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVS 72
           A+ T  S PS+S    P +IK PTF    +  L+++ +   +RA  I P AT+TPS   S
Sbjct: 18  ASKTTVSGPSLS----PHSIKVPTFLPLTVKPLNSSFTPHGARAITIAPHATSTPSSIPS 77

Query: 73  --SSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVE 132
             S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGS+AL+GLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 SNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
            NE KTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIEL +SRLINHT GKEYKLKPIGDAGPVI+AGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSHAQ 257
           IPS ++
Sbjct: 258 IPSQSK 259

[Close]

BLAST of CmaCh15G011110 vs. TrEMBL
Match: A0A0B0PW79_GOSAR (LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.6e-94
Identity = 181/246 (73.58%), Postives = 206/246 (83.74%), Query Frame = 1


Query: 13  ATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVS 72
           A+ T  S PS+S    P +IK PTF S  +  L+++ +   + A  I P AT+TPS   S
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  --SSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVE 132
             S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGS+AL+GLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 SNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
            NE KTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIEL +SRLINHT GKEYKLKPIGDAGPVI+AGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSHAQ 257
           IPS ++
Sbjct: 258 IPSQSK 259

[Close]

BLAST of CmaCh15G011110 vs. TrEMBL
Match: A0A0B0Q0G1_GOSAR (LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.6e-94
Identity = 181/246 (73.58%), Postives = 206/246 (83.74%), Query Frame = 1


Query: 13  ATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVS 72
           A+ T  S PS+S    P +IK PTF S  +  L+++ +   + A  I P AT+TPS   S
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  --SSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVE 132
             S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGS+AL+GLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 SNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
            NE KTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIEL +SRLINHT GKEYKLKPIGDAGPVI+AGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSHAQ 257
           IPS ++
Sbjct: 258 IPSQSK 259

[Close]

BLAST of CmaCh15G011110 vs. TrEMBL
Match: B9H074_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s10720g PE=4 SV=2)

HSP 1 Score: 349.4 bits (895), Expect = 3.8e-93
Identity = 175/244 (71.72%), Postives = 204/244 (83.61%), Query Frame = 1


Query: 12  FATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAV 71
           F+T+ P+  PS+S LSPP  +K P+   +F        SHAP    + +PRATA  +   
Sbjct: 18  FSTTNPK--PSLSFLSPP-CLKLPSILPSF----KPLTSHAPPDQLLSIPRATAAATPTT 77

Query: 72  SSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVES 131
           + +T FHG CYVVGDNIDTDQIIPAEYLTLVPS   EYEKLGS+AL+GLP++Y TRF+E+
Sbjct: 78  TPTTSFHGHCYVVGDNIDTDQIIPAEYLTLVPSKQEEYEKLGSYALIGLPATYKTRFIEA 137

Query: 132 NEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLE 191
           N+ KTKYSI+I G+NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGEIYPLE
Sbjct: 138 NQTKTKYSIVIGGENFGCGSSREHAPVALGAAGAAAVVAESYARIFFRNSVATGEIYPLE 197

Query: 192 SEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGMI 251
           SE+RIC+ECKTGD++TIELA+S+LINHT GKEYKLKPIGDAGPVI+AGGIFAYARKTGMI
Sbjct: 198 SEVRICEECKTGDLITIELAESKLINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI 254

Query: 252 PSHA 256
           PS A
Sbjct: 258 PSQA 254

[Close]

BLAST of CmaCh15G011110 vs. TAIR10
Match: AT2G43090.1 (AT2G43090.1 Aconitase/3-isopropylmalate dehydratase protein)

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-86
Identity = 168/253 (66.40%), Postives = 192/253 (75.89%), Query Frame = 1


Query: 13  ATSTPRSSPSISHL--SPPRTIKFPTFYSNFLNDLSTTVSH------APSRAAIILPRAT 72
           A S   ++P++S    SP +   F TF S FL   ST+V+       +   ++  + R+ 
Sbjct: 2   AASLQSANPTLSRTLASPNKPSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSA 61

Query: 73  ATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSY 132
           A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGS+ALVGLP+SY
Sbjct: 62  AEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASY 121

Query: 133 STRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVAT 192
             RFV+  EMKTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRNSVAT
Sbjct: 122 KERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRNSVAT 181

Query: 193 GEIYPLESEIRICDECKTGDVVTIEL--ADSRLINHTRGKEYKLKPIGDAGPVIQAGGIF 252
           GE+YPL+SE+R+CDEC TGDV T+EL   DS LINHT GKEYKLKPIGDAGPVI AGGIF
Sbjct: 182 GEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIF 241

Query: 253 AYARKTGMIPSHA 256
           AYARK GMIPS A
Sbjct: 242 AYARKAGMIPSAA 250

[Close]

BLAST of CmaCh15G011110 vs. TAIR10
Match: AT3G58990.1 (AT3G58990.1 isopropylmalate isomerase 1)

HSP 1 Score: 285.4 bits (729), Expect = 3.4e-77
Identity = 152/219 (69.41%), Postives = 170/219 (77.63%), Query Frame = 1


Query: 42  LNDLSTTVSHAP--SRAAIILPRATATPSYAVSSST--VFHGFCYVVGDNIDTDQIIPAE 101
           L   ST  ++ P  S +A I+ R  A+ S +  S T   FHG C+V+ DNIDTDQIIPAE
Sbjct: 34  LKSASTIFNYKPLTSSSATIITRVAASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAE 93

Query: 102 YLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAP 161
           Y TL+PS P + EKLGS AL GLP  Y+ RFV   EMK+KYS+II GDNFGCGSSREHAP
Sbjct: 94  YGTLIPSIPEDREKLGSFALNGLPKFYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAP 153

Query: 162 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELAD---SR 221
           V LGA+GA AVVAESYARIFFRN VATGEI+PLESE+RICDECKTGDVVTIE  +   S 
Sbjct: 154 VCLGAAGAKAVVAESYARIFFRNCVATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSL 213

Query: 222 LINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGMIPS 254
           LINHT  KEYKLKP+GDAGPVI AGGIFAYARK GMIPS
Sbjct: 214 LINHTTRKEYKLKPLGDAGPVIDAGGIFAYARKAGMIPS 252

[Close]

BLAST of CmaCh15G011110 vs. TAIR10
Match: AT2G43100.1 (AT2G43100.1 isopropylmalate isomerase 2)

HSP 1 Score: 268.1 bits (684), Expect = 5.7e-72
Identity = 148/255 (58.04%), Postives = 179/255 (70.20%), Query Frame = 1


Query: 8   SVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDL---STTVSHAPSRAAIILPRAT 67
           S+  F  + P SS   S  S   T + P    N    L   S +++   + +  I+PRA 
Sbjct: 4   SLPTFPQALPCSSTKTS--SSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAA 63

Query: 68  ATPSYA--VSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPS 127
           A+ S +    ++T FHG CYV+ DNIDTDQIIPA      PSN  E +++ +HAL GLP 
Sbjct: 64  ASESDSNEALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPD 123

Query: 128 SYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 187
            + TRF+E  E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSV
Sbjct: 124 FHKTRFIEPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSV 183

Query: 188 ATGEIYPLESEIRICDECKTGDVVTIELADS--RLINHTRGKEYKLKPIGDAGPVIQAGG 247
           ATGE++PLESE+R+C+ECKTGD VTIEL+DS   L NHT GK YKLK IGDAGPVI AGG
Sbjct: 184 ATGEVFPLESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGG 243

Query: 248 IFAYARKTGMIPSHA 256
           IFAYAR  GMIPS A
Sbjct: 244 IFAYARMMGMIPSLA 256

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: gi|659073428|ref|XP_008437054.1| (PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.6e-113
Identity = 214/253 (84.58%), Postives = 228/253 (90.12%), Query Frame = 1


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MA + F+S SP A STPRSSPS+S LS P+T+KFP+ YSN L DLS  VSHA  R A I+
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA+PS    S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGS+AL+GL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVES+EMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESE RICDECKTGDVVTIELA+SRLINHT GKEYKLKPIGDAGPVI+AGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 253

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: gi|449469371|ref|XP_004152394.1| (PREDICTED: 3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.5e-111
Identity = 213/253 (84.19%), Postives = 228/253 (90.12%), Query Frame = 1


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MA + F+S SP A STPRSSPSIS LS P+T+KF + +SNFL +LS  VSHAPSR A I+
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA+PS     ST FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGS+AL+GL
Sbjct: 61  PRATASPS-----STAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTR+VES EMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESE RIC+ECKTGDVVTIELA+SRLINHT GKEYKLKPIGDAGPVI+AGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 248

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: gi|823252271|ref|XP_012458761.1| (PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Gossypium raimondii])

HSP 1 Score: 354.0 bits (907), Expect = 2.2e-94
Identity = 181/246 (73.58%), Postives = 206/246 (83.74%), Query Frame = 1


Query: 13  ATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVS 72
           A+ T  S PS+S    P +IK PTF    +  L+++ +   +RA  I P AT+TPS   S
Sbjct: 18  ASKTTVSGPSLS----PHSIKVPTFLPLTVKPLNSSFTPHGARAITIAPHATSTPSSIPS 77

Query: 73  --SSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVE 132
             S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGS+AL+GLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 SNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
            NE KTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIEL +SRLINHT GKEYKLKPIGDAGPVI+AGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSHAQ 257
           IPS ++
Sbjct: 258 IPSQSK 259

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: gi|728849803|gb|KHG29246.1| (leuD [Gossypium arboreum])

HSP 1 Score: 353.2 bits (905), Expect = 3.8e-94
Identity = 181/246 (73.58%), Postives = 206/246 (83.74%), Query Frame = 1


Query: 13  ATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVS 72
           A+ T  S PS+S    P +IK PTF S  +  L+++ +   + A  I P AT+TPS   S
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  --SSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVE 132
             S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGS+AL+GLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 SNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
            NE KTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIEL +SRLINHT GKEYKLKPIGDAGPVI+AGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSHAQ 257
           IPS ++
Sbjct: 258 IPSQSK 259

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: gi|728849802|gb|KHG29245.1| (leuD [Gossypium arboreum])

HSP 1 Score: 353.2 bits (905), Expect = 3.8e-94
Identity = 181/246 (73.58%), Postives = 206/246 (83.74%), Query Frame = 1


Query: 13  ATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVS 72
           A+ T  S PS+S    P +IK PTF S  +  L+++ +   + A  I P AT+TPS   S
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  --SSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVE 132
             S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGS+AL+GLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 SNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
            NE KTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIEL +SRLINHT GKEYKLKPIGDAGPVI+AGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSHAQ 257
           IPS ++
Sbjct: 258 IPSQSK 259

The following BLAST results are available for this feature:

BLAST of CmaCh15G011110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEUD3_ARATH	5.5e-85	66.40	3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana GN=At2g430...	[more]
LEUD2_ARATH	6.1e-76	69.41	3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana GN=IPMI1 P...	[more]
LEUD1_ARATH	1.0e-70	58.04	3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana GN=IPMI2 P...	[more]
LEUD_THEYD	4.7e-28	44.12	3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii ...	[more]
LEUD2_THEMA	2.6e-26	40.59	3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATC...	[more]

BLAST of CmaCh15G011110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPB2_CUCSA	1.1e-111	84.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165170 PE=4 SV=1	[more]
A0A0D2V4U1_GOSRA	1.5e-94	73.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G137200 PE=4 SV=1	[more]
A0A0B0PW79_GOSAR	2.6e-94	73.58	LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1	[more]
A0A0B0Q0G1_GOSAR	2.6e-94	73.58	LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1	[more]
B9H074_POPTR	3.8e-93	71.72	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s10720g PE=4 SV=2	[more]

BLAST of CmaCh15G011110 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43090.1	3.1e-86	66.40	Aconitase/3-isopropylmalate dehydratase protein	[more]
AT3G58990.1	3.4e-77	69.41	isopropylmalate isomerase 1	[more]
AT2G43100.1	5.7e-72	58.04	isopropylmalate isomerase 2	[more]

BLAST of CmaCh15G011110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073428\|ref\|XP_008437054.1\|	3.6e-113	84.58	PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo]	[more]
gi\|449469371\|ref\|XP_004152394.1\|	1.5e-111	84.19	PREDICTED: 3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus]	[more]
gi\|823252271\|ref\|XP_012458761.1\|	2.2e-94	73.58	PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Gossypium raimond...	[more]
gi\|728849803\|gb\|KHG29246.1\|	3.8e-94	73.58	leuD [Gossypium arboreum]	[more]
gi\|728849802\|gb\|KHG29245.1\|	3.8e-94	73.58	leuD [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000573	AconitaseA/IPMdHydase_ssu_swvl
IPR011827	LeuD_type2/HacB/DmdB
IPR015928	Aconitase/3IPM_dehydase_swvl
IPR015937	Aconitase/isopropylmalate dehydratase

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016836	hydro-lyase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016836	hydro-lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G011110.1	CmaCh15G011110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000573	Aconitase A/isopropylmalate dehydratase small subunit, swivel domain	PFAM	PF00694	Aconitase_C	coord: 133..190 score: 2.0
IPR011827	Hydrolyase LeuD/HacB/DmdB	TIGRFAMs	TIGR02087	TIGR02087	coord: 81..247 score: 1.9
IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel	GENE3D	G3DSA:3.20.19.10		coord: 81..221 score: 3.6
IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel	unknown	SSF52016	LeuD/IlvD-like	coord: 76..252 score: 6.28
IPR015937	Aconitase/isopropylmalate dehydratase	PANTHER	PTHR11670	ACONITASE	coord: 67..253 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G011110	Cucsa.129780	Cucumber (Gy14) v1	cgycmaB0349
CmaCh15G011110	Cla003668	Watermelon (97103) v1	cmawmB275
CmaCh15G011110	Csa5G162650	Cucumber (Chinese Long) v2	cmacuB298
CmaCh15G011110	MELO3C005518	Melon (DHL92) v3.5.1	cmameB250
CmaCh15G011110	ClCG01G004210	Watermelon (Charleston Gray)	cmawcgB259
CmaCh15G011110	CSPI05G06950	Wild cucumber (PI 183967)	cmacpiB303
CmaCh15G011110	CmoCh02G015720	Cucurbita moschata (Rifu)	cmacmoB296
CmaCh15G011110	CmoCh15G011690	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G011110	Lsi09G004400	Bottle gourd (USVL1VR-Ls)	cmalsiB267
CmaCh15G011110	Cp4.1LG13g02440	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G011110	Cp4.1LG05g02540	Cucurbita pepo (Zucchini)	cmacpeB332
CmaCh15G011110	MELO3C005518.2	Melon (DHL92) v3.6.1	cmamedB284
CmaCh15G011110	CsaV3_5G004360	Cucumber (Chinese Long) v3	cmacucB0352
CmaCh15G011110	Cla97C01G004370	Watermelon (97103) v2	cmawmbB288
CmaCh15G011110	Bhi12G000435	Wax gourd	cmawgoB0375
CmaCh15G011110	CsGy5G004400	Cucumber (Gy14) v2	cgybcmaB608
CmaCh15G011110	Carg02459	Silver-seed gourd	carcmaB1263
CmaCh15G011110	Carg23194	Silver-seed gourd	carcmaB0757

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G011110	CmaCh02G015280	Cucurbita maxima (Rimu)	cmacmaB310

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G011110	Watermelon (97103) v2	cmawmbB290
CmaCh15G011110	Cucumber (Gy14) v1	cgycmaB0886
CmaCh15G011110	Cucurbita moschata (Rifu)	cmacmoB298
CmaCh15G011110	Wild cucumber (PI 183967)	cmacpiB285
CmaCh15G011110	Cucumber (Chinese Long) v2	cmacuB281
CmaCh15G011110	Melon (DHL92) v3.5.1	cmameB279
CmaCh15G011110	Watermelon (Charleston Gray)	cmawcgB246
CmaCh15G011110	Watermelon (97103) v1	cmawmB254
CmaCh15G011110	Cucurbita pepo (Zucchini)	cmacpeB329
CmaCh15G011110	Bottle gourd (USVL1VR-Ls)	cmalsiB291
CmaCh15G011110	Cucumber (Gy14) v2	cgybcmaB324