ClCG01G004210 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G004210
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	3-isopropylmalate dehydratase, small subunit
Location	CG_Chr01 : 4525605 .. 4526375 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCAGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCGCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGAAGACGGGTATGATTCCAAGCCAAACGAAGTGA

mRNA sequence

ATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCAGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCGCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGAAGACGGGTATGATTCCAAGCCAAACGAAGTGA

Coding sequence (CDS)

ATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCAGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCGCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGAAGACGGGTATGATTCCAAGCCAAACGAAGTGA

Protein sequence

MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPSQTK

Homology

[Close]

BLAST of ClCG01G004210 vs. Swiss-Prot
Match: LEUD3_ARATH (3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana GN=At2g43090 PE=1 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.7e-86
Identity = 168/255 (65.88%), Postives = 193/255 (75.69%), Query Frame = 1


Query: 12  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 71
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 72  PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 131
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQERK----TFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 132 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 191
           P+SY  RFV+P E KTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRN 180

Query: 192 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 251
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 240

Query: 252 GGIFAYARKTGMIPS 254
           GGIFAYARK GMIPS
Sbjct: 241 GGIFAYARKAGMIPS 248

[Close]

BLAST of ClCG01G004210 vs. Swiss-Prot
Match: LEUD2_ARATH (3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana GN=IPMI1 PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.5e-79
Identity = 163/254 (64.17%), Postives = 184/254 (72.44%), Query Frame = 1


Query: 6   FLSQSPIATSTPRSSPSISLLPSP-QTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRAT 65
           FL+ +   +    +  S +L PSP   +K  S   N++   S         +ATII R  
Sbjct: 7   FLNPTLFKSLASSNKNSCTLCPSPFLQLKSASTIFNYKPLTS--------SSATIITRVA 66

Query: 66  ASPSSAAPSTT--AFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPS 125
           AS S +  S T   FHG C+V+ DNIDTDQIIPAEY TL+PS P + EKLGS+AL GLP 
Sbjct: 67  ASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNGLPK 126

Query: 126 SYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 185
            Y+ RFV P E K+KYS+II GDNFGCGSSREHAPV LGA+GA AVVAESYARIFFRN V
Sbjct: 127 FYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCV 186

Query: 186 ATGEIYPLESEIRICDECKTGDVVTIEL---GESRLINHTTGKEYKLKPIGDAGPVIEAG 245
           ATGEI+PLESE+RICDECKTGDVVTIE    G S LINHTT KEYKLKP+GDAGPVI+AG
Sbjct: 187 ATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAG 246

Query: 246 GIFAYARKTGMIPS 254
           GIFAYARK GMIPS
Sbjct: 247 GIFAYARKAGMIPS 252

[Close]

BLAST of ClCG01G004210 vs. Swiss-Prot
Match: LEUD1_ARATH (3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana GN=IPMI2 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.6e-76
Identity = 150/246 (60.98%), Postives = 175/246 (71.14%), Query Frame = 1


Query: 17  PRSSPSISLLPSPQTIKFPSPHSNFRNDLS-----IAISHAPPRAATIIPRATASPSSA- 76
           P++ P  S   S     F SP   F    S     I+I+     + TIIPRA AS S + 
Sbjct: 9   PQALPCSSTKTSSSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAAASESDSN 68

Query: 77  -APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFV 136
            A + T FHG CYV+ DNIDTDQIIPA      PSN  E +++ ++AL GLP  + TRF+
Sbjct: 69  EALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFI 128

Query: 137 EPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYP 196
           EP E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSVATGE++P
Sbjct: 129 EPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFP 188

Query: 197 LESEIRICDECKTGDVVTIELGES--RLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARK 254
           LESE+R+C+ECKTGD VTIEL +S   L NHTTGK YKLK IGDAGPVI+AGGIFAYAR 
Sbjct: 189 LESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARM 248

[Close]

BLAST of ClCG01G004210 vs. Swiss-Prot
Match: LEUD_THEYD (3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuD PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-28
Identity = 76/170 (44.71%), Postives = 103/170 (60.59%), Query Frame = 1


Query: 79  GRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKY 138
           G+ +  GDNIDTD IIPA YL     N S+ ++L  + +    SS+ ++ V+P +     
Sbjct: 5   GKVWKFGDNIDTDAIIPARYL-----NTSDPKELAKHVMEDADSSFPSK-VKPGD----- 64

Query: 139 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 198
            IIIAG NFGCGSSREHAP+A+ ASG  AV+A+SYARIFFRN+   G   P+     + D
Sbjct: 65  -IIIAGRNFGCGSSREHAPIAIKASGIRAVIAKSYARIFFRNAFNIG--LPIFEVPELID 124

Query: 199 ECKTGDVVTIELGESRLINHTTGKEYKLKPIGD-AGPVIEAGGIFAYARK 248
           E   GD V I++   ++IN T GK+Y  KPI      +I+AGG+  + +K
Sbjct: 125 ETNEGDEVEIDMNSGQIINLTKGKKYNTKPIPPFMQELIKAGGLVEWTKK 160

[Close]

BLAST of ClCG01G004210 vs. Swiss-Prot
Match: LEUD2_THEMA (3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=leuD2 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.3e-27
Identity = 72/170 (42.35%), Postives = 104/170 (61.18%), Query Frame = 1


Query: 79  GRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKY 138
           G+ +V GDN++TD+IIPA YL     N S+ ++L  Y +      +  R    D+ K   
Sbjct: 7   GKVFVFGDNVNTDEIIPARYL-----NTSDPQELAKYCMEDARPGFGRR----DDIKG-- 66

Query: 139 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 198
           SII+AG+NFGCGSSREHAPVA+ A+G   V+A+S+ARIFFRN++  G   P+  E++  D
Sbjct: 67  SIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEAD 126

Query: 199 ECKTGDVVTIELGESRLINHTTGKEYKLKPIGD-AGPVIEAGGIFAYARK 248
           E + GD+  ++L    + N T GKEY+++P  +    ++EAGG   Y  K
Sbjct: 127 EFEEGDIAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 162

[Close]

BLAST of ClCG01G004210 vs. TrEMBL
Match: A0A0A0KPB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165170 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 7.4e-121
Identity = 228/253 (90.12%), Postives = 234/253 (92.49%), Query Frame = 1


Query: 1   MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 60
           MAASLFLSQSPIA STPRSSPSISLL SPQT+KF S HSNF  +LSIA+SHAP R ATII
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 61  PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120
           PRATASPSS     TAFHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSS-----TAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTR+VE +E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 240
           SVATGEIYPLESE RIC+ECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 248

[Close]

BLAST of ClCG01G004210 vs. TrEMBL
Match: A0A0B0PW79_GOSAR (LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 7.9e-99
Identity = 189/246 (76.83%), Postives = 209/246 (84.96%), Query Frame = 1


Query: 13  ATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSS--A 72
           A+ T  S PS+S    P +IK P+  S     L+ + +     A TI P AT++PSS  +
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE 132
             STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGSYALIGLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 PDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
           P+ETKTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSQTK 257
           IPSQ+K
Sbjct: 258 IPSQSK 259

[Close]

BLAST of ClCG01G004210 vs. TrEMBL
Match: A0A0B0Q0G1_GOSAR (LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 7.9e-99
Identity = 189/246 (76.83%), Postives = 209/246 (84.96%), Query Frame = 1


Query: 13  ATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSS--A 72
           A+ T  S PS+S    P +IK P+  S     L+ + +     A TI P AT++PSS  +
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE 132
             STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGSYALIGLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 PDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
           P+ETKTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSQTK 257
           IPSQ+K
Sbjct: 258 IPSQSK 259

[Close]

BLAST of ClCG01G004210 vs. TrEMBL
Match: A0A0D2V4U1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G137200 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.0e-98
Identity = 189/246 (76.83%), Postives = 209/246 (84.96%), Query Frame = 1


Query: 13  ATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSS--A 72
           A+ T  S PS+S    P +IK P+        L+ + +    RA TI P AT++PSS  +
Sbjct: 18  ASKTTVSGPSLS----PHSIKVPTFLPLTVKPLNSSFTPHGARAITIAPHATSTPSSIPS 77

Query: 73  APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE 132
             STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGSYALIGLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 PDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
           P+ETKTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSQTK 257
           IPSQ+K
Sbjct: 258 IPSQSK 259

[Close]

BLAST of ClCG01G004210 vs. TrEMBL
Match: A0A067KUS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03423 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.5e-97
Identity = 190/255 (74.51%), Postives = 209/255 (81.96%), Query Frame = 1


Query: 2   AASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPS--PHSNFRNDLSIAISHAPPRAATI 61
           AAS    +   + +T  S PS+S   SP++IK PS  PHS F+   S A S        +
Sbjct: 4   AASTISLKPKASIATSISKPSLSF-SSPRSIKLPSIHPHSTFKPLTSNARS-------VL 63

Query: 62  IPRATASPSSAAPS-TTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALI 121
           +PR+TA+PSS   +  T FHG CYVVGDNIDTDQIIPAEYLTLVPSNP+EYEKLGSYALI
Sbjct: 64  VPRSTATPSSTTSTIATTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPAEYEKLGSYALI 123

Query: 122 GLPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFF 181
           GLP+SY TRF+EP ETKTKYSI+I GDNFGCGSSREHAPVALGA+G  AVVAESYARIFF
Sbjct: 124 GLPASYETRFIEPGETKTKYSIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFF 183

Query: 182 RNSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEA 241
           RNSVATGEIYPLESE+RIC+ECKTGDVVTIEL E RLINHTTGKEY LKPIGDAGPVIEA
Sbjct: 184 RNSVATGEIYPLESEVRICEECKTGDVVTIELAEGRLINHTTGKEYILKPIGDAGPVIEA 243

Query: 242 GGIFAYARKTGMIPS 254
           GGIFAYARKTGMIPS
Sbjct: 244 GGIFAYARKTGMIPS 250

[Close]

BLAST of ClCG01G004210 vs. TAIR10
Match: AT2G43090.1 (AT2G43090.1 Aconitase/3-isopropylmalate dehydratase protein)

HSP 1 Score: 320.5 bits (820), Expect = 9.6e-88
Identity = 168/255 (65.88%), Postives = 193/255 (75.69%), Query Frame = 1


Query: 12  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 71
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 72  PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 131
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQERK----TFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 132 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 191
           P+SY  RFV+P E KTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRN 180

Query: 192 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 251
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 240

Query: 252 GGIFAYARKTGMIPS 254
           GGIFAYARK GMIPS
Sbjct: 241 GGIFAYARKAGMIPS 248

[Close]

BLAST of ClCG01G004210 vs. TAIR10
Match: AT3G58990.1 (AT3G58990.1 isopropylmalate isomerase 1)

HSP 1 Score: 297.4 bits (760), Expect = 8.7e-81
Identity = 163/254 (64.17%), Postives = 184/254 (72.44%), Query Frame = 1


Query: 6   FLSQSPIATSTPRSSPSISLLPSP-QTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRAT 65
           FL+ +   +    +  S +L PSP   +K  S   N++   S         +ATII R  
Sbjct: 7   FLNPTLFKSLASSNKNSCTLCPSPFLQLKSASTIFNYKPLTS--------SSATIITRVA 66

Query: 66  ASPSSAAPSTT--AFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPS 125
           AS S +  S T   FHG C+V+ DNIDTDQIIPAEY TL+PS P + EKLGS+AL GLP 
Sbjct: 67  ASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNGLPK 126

Query: 126 SYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 185
            Y+ RFV P E K+KYS+II GDNFGCGSSREHAPV LGA+GA AVVAESYARIFFRN V
Sbjct: 127 FYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCV 186

Query: 186 ATGEIYPLESEIRICDECKTGDVVTIEL---GESRLINHTTGKEYKLKPIGDAGPVIEAG 245
           ATGEI+PLESE+RICDECKTGDVVTIE    G S LINHTT KEYKLKP+GDAGPVI+AG
Sbjct: 187 ATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAG 246

Query: 246 GIFAYARKTGMIPS 254
           GIFAYARK GMIPS
Sbjct: 247 GIFAYARKAGMIPS 252

[Close]

BLAST of ClCG01G004210 vs. TAIR10
Match: AT2G43100.1 (AT2G43100.1 isopropylmalate isomerase 2)

HSP 1 Score: 285.8 bits (730), Expect = 2.6e-77
Identity = 150/246 (60.98%), Postives = 175/246 (71.14%), Query Frame = 1


Query: 17  PRSSPSISLLPSPQTIKFPSPHSNFRNDLS-----IAISHAPPRAATIIPRATASPSSA- 76
           P++ P  S   S     F SP   F    S     I+I+     + TIIPRA AS S + 
Sbjct: 9   PQALPCSSTKTSSSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAAASESDSN 68

Query: 77  -APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFV 136
            A + T FHG CYV+ DNIDTDQIIPA      PSN  E +++ ++AL GLP  + TRF+
Sbjct: 69  EALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFI 128

Query: 137 EPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYP 196
           EP E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSVATGE++P
Sbjct: 129 EPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFP 188

Query: 197 LESEIRICDECKTGDVVTIELGES--RLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARK 254
           LESE+R+C+ECKTGD VTIEL +S   L NHTTGK YKLK IGDAGPVI+AGGIFAYAR 
Sbjct: 189 LESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARM 248

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: gi|659073428|ref|XP_008437054.1| (PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo])

HSP 1 Score: 458.4 bits (1178), Expect = 8.4e-126
Identity = 233/253 (92.09%), Postives = 238/253 (94.07%), Query Frame = 1


Query: 1   MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 60
           MAASLFLS+SPIA STPRSSPS+SLL SPQT+KFPS +SN   DLSIA+SHA PR ATII
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 61  PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120
           PRATASPSS APS TAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 240
           SVATGEIYPLESE RICDECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 253

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: gi|449469371|ref|XP_004152394.1| (PREDICTED: 3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 1.1e-120
Identity = 228/253 (90.12%), Postives = 234/253 (92.49%), Query Frame = 1


Query: 1   MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 60
           MAASLFLSQSPIA STPRSSPSISLL SPQT+KF S HSNF  +LSIA+SHAP R ATII
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 61  PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120
           PRATASPSS     TAFHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSS-----TAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTR+VE +E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 240
           SVATGEIYPLESE RIC+ECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 248

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: gi|728849802|gb|KHG29245.1| (leuD [Gossypium arboreum])

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 189/246 (76.83%), Postives = 209/246 (84.96%), Query Frame = 1


Query: 13  ATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSS--A 72
           A+ T  S PS+S    P +IK P+  S     L+ + +     A TI P AT++PSS  +
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE 132
             STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGSYALIGLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 PDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
           P+ETKTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSQTK 257
           IPSQ+K
Sbjct: 258 IPSQSK 259

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: gi|728849803|gb|KHG29246.1| (leuD [Gossypium arboreum])

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 189/246 (76.83%), Postives = 209/246 (84.96%), Query Frame = 1


Query: 13  ATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSS--A 72
           A+ T  S PS+S    P +IK P+  S     L+ + +     A TI P AT++PSS  +
Sbjct: 18  ASKTRVSGPSLS----PHSIKVPTFSSLTVKPLNSSFTPHGAHAITIAPHATSTPSSIPS 77

Query: 73  APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE 132
             STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGSYALIGLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 PDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
           P+ETKTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSQTK 257
           IPSQ+K
Sbjct: 258 IPSQSK 259

[Close]

BLAST of ClCG01G004210 vs. NCBI nr
Match: gi|823252271|ref|XP_012458761.1| (PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Gossypium raimondii])

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-98
Identity = 189/246 (76.83%), Postives = 209/246 (84.96%), Query Frame = 1


Query: 13  ATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSS--A 72
           A+ T  S PS+S    P +IK P+        L+ + +    RA TI P AT++PSS  +
Sbjct: 18  ASKTTVSGPSLS----PHSIKVPTFLPLTVKPLNSSFTPHGARAITIAPHATSTPSSIPS 77

Query: 73  APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE 132
             STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGSYALIGLPSSY+TRF+E
Sbjct: 78  DTSTTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSSYATRFIE 137

Query: 133 PDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPL 192
           P+ETKTKYSI+I G NFGCGSSREHAPVALGA+GA AVVAESYARIFFRNSVATGE+YPL
Sbjct: 138 PNETKTKYSIVIGGANFGCGSSREHAPVALGAAGAKAVVAESYARIFFRNSVATGEVYPL 197

Query: 193 ESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 252
           ESE+RIC+EC+TGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM
Sbjct: 198 ESEVRICEECRTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGM 257

Query: 253 IPSQTK 257
           IPSQ+K
Sbjct: 258 IPSQSK 259

The following BLAST results are available for this feature:

BLAST of ClCG01G004210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEUD3_ARATH	1.7e-86	65.88	3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana GN=At2g430...	[more]
LEUD2_ARATH	1.5e-79	64.17	3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana GN=IPMI1 P...	[more]
LEUD1_ARATH	4.6e-76	60.98	3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana GN=IPMI2 P...	[more]
LEUD_THEYD	2.8e-28	44.71	3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii ...	[more]
LEUD2_THEMA	2.3e-27	42.35	3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATC...	[more]

BLAST of ClCG01G004210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPB2_CUCSA	7.4e-121	90.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165170 PE=4 SV=1	[more]
A0A0B0PW79_GOSAR	7.9e-99	76.83	LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1	[more]
A0A0B0Q0G1_GOSAR	7.9e-99	76.83	LeuD OS=Gossypium arboreum GN=F383_11639 PE=4 SV=1	[more]
A0A0D2V4U1_GOSRA	1.0e-98	76.83	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G137200 PE=4 SV=1	[more]
A0A067KUS4_JATCU	1.5e-97	74.51	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03423 PE=4 SV=1	[more]

BLAST of ClCG01G004210 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43090.1	9.6e-88	65.88	Aconitase/3-isopropylmalate dehydratase protein	[more]
AT3G58990.1	8.7e-81	64.17	isopropylmalate isomerase 1	[more]
AT2G43100.1	2.6e-77	60.98	isopropylmalate isomerase 2	[more]

BLAST of ClCG01G004210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073428\|ref\|XP_008437054.1\|	8.4e-126	92.09	PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo]	[more]
gi\|449469371\|ref\|XP_004152394.1\|	1.1e-120	90.12	PREDICTED: 3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus]	[more]
gi\|728849802\|gb\|KHG29245.1\|	1.1e-98	76.83	leuD [Gossypium arboreum]	[more]
gi\|728849803\|gb\|KHG29246.1\|	1.1e-98	76.83	leuD [Gossypium arboreum]	[more]
gi\|823252271\|ref\|XP_012458761.1\|	1.5e-98	76.83	PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Gossypium raimond...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000573	AconitaseA/IPMdHydase_ssu_swvl
IPR011827	LeuD_type2/HacB/DmdB
IPR015928	Aconitase/3IPM_dehydase_swvl
IPR015937	Aconitase/isopropylmalate dehydratase

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016836	hydro-lyase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016836	hydro-lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G004210.1	ClCG01G004210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000573	Aconitase A/isopropylmalate dehydratase small subunit, swivel domain	PFAM	PF00694	Aconitase_C	coord: 137..190 score: 3.3
IPR011827	Hydrolyase LeuD/HacB/DmdB	TIGRFAMs	TIGR02087	TIGR02087	coord: 79..247 score: 3.1
IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel	GENE3D	G3DSA:3.20.19.10		coord: 70..221 score: 7.1
IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel	unknown	SSF52016	LeuD/IlvD-like	coord: 76..252 score: 3.53
IPR015937	Aconitase/isopropylmalate dehydratase	PANTHER	PTHR11670	ACONITASE	coord: 68..253 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G004210	MELO3C005518	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G004210	Cla003668	Watermelon (97103) v1	wcgwmB154
ClCG01G004210	Cla97C01G004370	Watermelon (97103) v2	wcgwmbB089
ClCG01G004210	Bhi12G000435	Wax gourd	wcgwgoB193
ClCG01G004210	Cucsa.129780	Cucumber (Gy14) v1	cgywcgB211
ClCG01G004210	CmaCh15G011110	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G004210	CmaCh02G015280	Cucurbita maxima (Rimu)	cmawcgB524
ClCG01G004210	CmoCh02G015720	Cucurbita moschata (Rifu)	cmowcgB522
ClCG01G004210	CmoCh15G011690	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G004210	Lsi09G004400	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G004210	Cp4.1LG13g02440	Cucurbita pepo (Zucchini)	cpewcgB165
ClCG01G004210	Cp4.1LG05g02540	Cucurbita pepo (Zucchini)	cpewcgB637
ClCG01G004210	CsGy5G004400	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G004210	MELO3C005518.2	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G004210	Carg23194	Silver-seed gourd	carwcgB0528
ClCG01G004210	Carg02459	Silver-seed gourd	carwcgB0897

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G004210	Cucumber (Chinese Long) v3	cucwcgB211
ClCG01G004210	Cucumber (Chinese Long) v3	cucwcgB385
ClCG01G004210	Watermelon (97103) v2	wcgwmbB094
ClCG01G004210	Wax gourd	wcgwgoB213
ClCG01G004210	Cucumber (Gy14) v1	cgywcgB557
ClCG01G004210	Cucurbita maxima (Rimu)	cmawcgB518
ClCG01G004210	Cucurbita maxima (Rimu)	cmawcgB733
ClCG01G004210	Cucurbita moschata (Rifu)	cmowcgB516
ClCG01G004210	Cucurbita moschata (Rifu)	cmowcgB737
ClCG01G004210	Wild cucumber (PI 183967)	cpiwcgB209
ClCG01G004210	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G004210	Cucumber (Chinese Long) v2	cuwcgB207
ClCG01G004210	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G004210	Melon (DHL92) v3.5.1	mewcgB418
ClCG01G004210	Watermelon (97103) v1	wcgwmB119
ClCG01G004210	Cucurbita pepo (Zucchini)	cpewcgB641
ClCG01G004210	Cucurbita pepo (Zucchini)	cpewcgB780