CmaCh15G009580 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G009580
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCytosolic fe-s cluster assembly factor nar1
LocationCma_Chr15 : 5156070 .. 5160114 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGTATTGAAATGCATAAGAATTTTGTTGTTTGAGCGTATACAAAATTATGTGTTAATTTGCTTCCAAATGTTATGATCCCATTTGATGTGGAGGAGTATATAGCCTTTTCCCGGGGCCGTGTTGATGAAATGAAATCTCTCCAATTTTCGAGCGATTTCGGTGAGGTTGAGGCCTGAGGGACACCTCAAGGATTGATTGGGGGAATGCGAATTGCTTCCCGTCGAACAACAACATTCTTTTCAGTGATTCGCATCTCCACCAATCTCCCCTGAATCTCGCCTCCTCTGATCCTCCTCTATCGATCTCGCAGCCGGTCCTCCTCCTCCTCCTCTCCGCCGCAGCATCTCAATATCATCAGGTTTTTAATTCATTCCCTCATTCTTCAATGTCGAATCCTTTCTGGATTTTTCCTTGTTCTTGTGATCTGGTTCCTGAAATCTCGAATTTGGAAACCCTATATTCATCGTATTTGTTGTTCTCATCCATTCTGCTTCCAGATTAAGATTGCGATAATTAAAAAATTCTATTATATATTGAATAATGGGCATGAGTGTATGGTTGATTCTTTGAATATTCTAATTTTTTATTTGTGGGGGATTCTCGATGATTCGTATAGCGTATTCAATTTTGTGGTATACATAGCTGTATTTCTGCTGCTGCTGCTTCTCCTCCCACCAAACTAACATGAAAAGGCAATCCTGTTGCCATTTGTAAGGATCCAAAATCTGCAATGTAATTAGATGAAACTTCAATTTTCTCTGTTTGAAATGATCTCTGCCTCACCCTTCCTTCATTAACAAGGTTATTGAATCCAGTTGTACTTGATTAAACAATGATTCGCTAAAAGAAGCAACTCTGATAGGCAGTGGAAATAGTTGGTACTCAAGTTTCTTGTCTACTAACCAAACGCCCAAATGTATGCAACTGTATATGATTTTTCTGGGAATGTTGATTTCTTCAAATGAAGATTTGATTAAGAAGATTTTTACCTGTGCAGTTCAACATAGGAGTTTGCACTGGACATAGTTATATTGTTCGATGCCAGCAGAGTGTTGCTGGCATTGAGAATGATTCGGCTTGTTACTGAAACTCTGATGGGTATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTGCTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTACATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAGTAAGTTGACATGAAAACTGATAGAGCTTTGTATTATTTGTTCACAAACAGCCTAACAAGTTTAGGATGTTCATAGAGCTCTTACCAAAATTATAACCTCCTTAGACCATGGTATTAACGGTTTGTTCATGATCTTCAGATGGGTATGGGAGCAGAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTATAGTCTTGAAATCTCTTCACCTTCGTAGTCATACATCATCTTGCAATGTTGGATTTTATGTGAGATCCCACGTTGGTTGGAGAGGAGAACGAAACATTCTTTATAAGAATGTGGAAACCTCTCCCTATTAGATACGTTTTTAAAAACCTTGAGAAGAAGCCCGGAATGGAAAACCCAAAGAGGAGAATATTTGCTAGCGGTAAGTTTGGGCTGTCACAAATGGTATTAGAGTCAGACATCAGACGGTGTGCTAGCGAGCTCCGAAGAGGGGGGGATTATGAGAGGAAAACCTAGGGAAAACCCAAGAGGACTTAAAAGAGAGTCCCAAGGCTTTAGTATTATCTATAAATGGCTTCAAAATGTTTATCCTCTTGTTATTTGGTTGGTAGGTGATCGGAATATAGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGTAGGTAACTACTGCTCAAAGTTTTCGACATGTGTGTGTAGGTGCTTGTCTGATTATTTGGCTTTTTACTTGGAACACAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGAGTAGGAGTTGCTTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTAAGATGGGCCGACTACACAATGATCGCTACAGCCACGGTGGTAAGTTAATAATGGATTTGTTTATTGTTTATTGGCATAAAGACAAAAGTGTAACAACCCTAGATTTCTACTAACCTAAAGCCGTTACCGTCATCATAATCTATACTCTTATGCAGAATTAAACATTTAATACTTCATCATAAAACACTACCATGGACTTACGTGTTCGAAAACATCTTTAAAACAACATAACGAAATACTAAATGAAATAGATAAACAATAAAAGTAAAAACACCCTATGCTAACCTAAAGTATAAGAAATAAAATACCACTATTCTATGCATATGTCATGGTCTTGACTTGCGATGTCGTCATTAACTGAACAGGGATGCATTGCCTTTACCTGAAATAAAAATAGCACACTGCTTGAGTATTTTAAGTGACCCCACTATTGGTATTAGGGAATGCAAACACATGCAACTTATTATTAAGGACTTATCGTGAAAACCATCATAGGGGTGACCGATTTCATTCATTTACAAGACGGGAAAGTTCAGGGTGGAAGAGAAAGCTGCAAGAGAACTGGACTTTACTGAGGGAAAGAGTGAAAGAGGGTTCCGGTTGAACTATCTCCCAACCATTTTTCTAAGTTCCGATCCTTCCTTGATCTTTTTTACCTTGTTCAATCAGGTTTAGGAGGTCAGCTTATCTTGAATCGAGAGATGCCTTAGTCTATTATTACCAGTTTGGACAAAATTGGATGTGTAGTACTTCCCCACACACGACCCACATGTGCGTGTGTGGATTCCTAGGCATTTTGCACCCCCCTTGGACCCATCATAGTCGAGCTAGCATTCGTAGCGATGTCCAGAGGTTTGCAGACCTCGAGTGTCGTGCGTCATAATCATCATCATCATAGTGTACACGTCCGTACTCATCATCATAAATGGGGAAGTATCCCAATGTATATGAATACACAAAATGTATGAGGTCCCTGTAGTTTTCATCTTTAAACCATCTTTAAGACACAAATCCCACATTAGTTGGGGTGGAGAATGAATCATTCTTTATAAGGGTGTGGAAACGTTTCGTAGCAGACACATTTTAAAAACCTTGAGAGAAAGCCTAAAAAGAACAATATCTTCTAGCAGTGGGCTTGAGCTGTCATGGCTTGAGCTATTACAAAAGAGTTGTTAGGGCATAAAACTTGGTGTTTTACTTTGAGTTGATTTTGTAGGCTTATTTGAACTTAGATTTTCTCATGTCTCAAACTATATTGCAGTGCCTGACAGGAGCTTTGAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCATACTGGGATGATGGAGGTAACATTTTGCTCATGCCTTTGCATGATTAATTGATATTGATATTGATATGTTTGATTATGAAACTCAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGACGATGCTTTTCCCCAAACTCCGTTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGATTAATTGTGTTCATAATACAGACATAAATTTGTCGACGCCTCAGCCTCTTGCTTTCTTGGAGTAGTTCTCAATTATTTTTCTTTTGAATGGGATTAAAACACCGACTAAGTGAGACACGTTAGAACATCAATATTTGAACTTCATAACACTATTTTGCATTCATTTTAGTGGGAAAGCTATGGAGCGGTTGTCTTGAAATAATTTTGAATGTCAAGTGTTCAAATGAAACTTTTTGAATCAATAAGATTGTACTGAAACTTTGCATATATTTGTATTATTATTGAAATGTCATATATCAC

mRNA sequence

ATGAGTGGCCTGAGGGACACCTCAAGGATTGATTGGGGGAATGCGAATTGCTTCCCGTCGAACAACAACATTCTTTTCAGTGATTCGCATCTCCACCAATCTCCCCTGAATCTCGCCTCCTCTGATCCTCCTCTATCGATCTCGCAGCCGGTCCTCCTCCTCCTCCTCTCCGCCGCAGCATCTCAATATCATCAGGAGTTTGCACTGGACATAGTTATATTGTTCGATGCCAGCAGAGTGTTGCTGGCATTGAGAATGATTCGGCTTGTTACTGAAACTCTGATGGGTATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTGCTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTACATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAATGGGTATGGGAGCAGAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATATAGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGAGTAGGAGTTGCTTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTAAGATGGGCCGACTACACAATGATCGCTACAGCCACGGTGTGCCTGACAGGAGCTTTGAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCATACTGGGATGATGGAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGACGATGCTTTTCCCCAAACTCCGTTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGATTAATTGTGTTCATAATACAGACATAAATTTGTCGACGCCTCAGCCTCTTGCTTTCTTGGAGTAGTTCTCAATTATTTTTCTTTTGAATGGGATTAAAACACCGACTAAGTGAGACACGTTAGAACATCAATATTTGAACTTCATAACACTATTTTGCATTCATTTTAGTGGGAAAGCTATGGAGCGGTTGTCTTGAAATAATTTTGAATGTCAAGTGTTCAAATGAAACTTTTTGAATCAATAAGATTGTACTGAAACTTTGCATATATTTGTATTATTATTGAAATGTCATATATCAC

Coding sequence (CDS)

ATGAGTGGCCTGAGGGACACCTCAAGGATTGATTGGGGGAATGCGAATTGCTTCCCGTCGAACAACAACATTCTTTTCAGTGATTCGCATCTCCACCAATCTCCCCTGAATCTCGCCTCCTCTGATCCTCCTCTATCGATCTCGCAGCCGGTCCTCCTCCTCCTCCTCTCCGCCGCAGCATCTCAATATCATCAGGAGTTTGCACTGGACATAGTTATATTGTTCGATGCCAGCAGAGTGTTGCTGGCATTGAGAATGATTCGGCTTGTTACTGAAACTCTGATGGGTATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTGCTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTACATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAATGGGTATGGGAGCAGAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATATAGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGAGTAGGAGTTGCTTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTAAGATGGGCCGACTACACAATGATCGCTACAGCCACGGTGTGCCTGACAGGAGCTTTGAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCATACTGGGATGATGGAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGACGATGCTTTTCCCCAAACTCCGTTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGA

Protein sequence

MSGLRDTSRIDWGNANCFPSNNNILFSDSHLHQSPLNLASSDPPLSISQPVLLLLLSAAASQYHQEFALDIVILFDASRVLLALRMIRLVTETLMGIYNKSNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALSVNQWVWEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAVGVGTCNKLLE
Homology
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BLAST of CmaCh15G009580 vs. TrEMBL
Match: A0A0A0KPJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570380 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 7.5e-121
Identity = 219/260 (84.23%), Postives = 238/260 (91.54%), Query Frame = 1 

Query: 86  MIRLVTETLMGIYNKSNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALS 145
           MI+L+TETLMGI NKSNSSRALEGLHGV +V  SQ F +EK ++DG+FS  SCG+S  +S
Sbjct: 1   MIQLITETLMGIQNKSNSSRALEGLHGVTIVAESQ-FTVEKTTQDGEFSQSSCGNS-VIS 60

Query: 146 VN-----QWVWEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRL 205
           VN     QWVWEQRPSCLRPVGGCIQGDRN+AERVANVLTSLPFIALG+QAPR+NF  +L
Sbjct: 61  VNQSLLKQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGVQAPRRNFSMKL 120

Query: 206 YANSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFL 265
           YANSLIGVGVASSLYHSSRGK+RQYLRWADYTMIA ATVCLTGAL+NDNP++LMAASA L
Sbjct: 121 YANSLIGVGVASSLYHSSRGKVRQYLRWADYTMIAAATVCLTGALKNDNPKLLMAASALL 180

Query: 266 LPLRPFTVSALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFI 325
           LPLRPFTVSALHTGMMEV+FAKRALKDPDLRMAHNVHK+STLLGGVLFVADD  PQTPFI
Sbjct: 181 LPLRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTLLGGVLFVADDVLPQTPFI 240

Query: 326 HAAWHLAAAVGVGTCNKLLE 341
           HAAWHLAAAVGVGTCNKLLE
Sbjct: 241 HAAWHLAAAVGVGTCNKLLE 258

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BLAST of CmaCh15G009580 vs. TrEMBL
Match: A5BL15_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05030 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-97
Identity = 180/250 (72.00%), Postives = 208/250 (83.20%), Query Frame = 1 

Query: 95  MGIYNKSNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALSVNQ----WV 154
           M   +KSN SRAL+G+HGV VVP S  FALE+ ++ GDF   +C  SS +  NQ     V
Sbjct: 1   MSHQSKSNPSRALDGVHGVRVVPHSP-FALEEITKPGDFDRSTCERSS-IEANQRLLMQV 60

Query: 155 WEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGV 214
           W+QRP+CLRPV  C+ GD ++ E VANVLTSLPFIALGIQAPRKN   +LYANSLIGVG+
Sbjct: 61  WQQRPACLRPVRCCLNGDESLGETVANVLTSLPFIALGIQAPRKNLNCKLYANSLIGVGI 120

Query: 215 ASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSA 274
           AS LYHSSRGKLR+YLRWADYTMIATATVCL+ A+RN+NP++LMAASAF LP++P  VSA
Sbjct: 121 ASGLYHSSRGKLRKYLRWADYTMIATATVCLSRAIRNENPKLLMAASAFFLPIQPLMVSA 180

Query: 275 LHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAV 334
           +HTGMMEV FAKRAL DPDLRM HNVHK+S+LLGG LF+ADD FP+TPFIHAAWHLAAAV
Sbjct: 181 VHTGMMEVAFAKRALDDPDLRMVHNVHKMSSLLGGALFIADDVFPRTPFIHAAWHLAAAV 240

Query: 335 GVGTCNKLLE 341
           GVGTCNKLLE
Sbjct: 241 GVGTCNKLLE 248

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BLAST of CmaCh15G009580 vs. TrEMBL
Match: B9HW55_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12140g PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.4e-97
Identity = 176/243 (72.43%), Postives = 207/243 (85.19%), Query Frame = 1 

Query: 102 NSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSS----SALSVNQWVWEQRPSC 161
           N S+ LEG+HG+ VVP S  FAL++ ++ GDF   +C SS    + L + Q VW+QRP C
Sbjct: 8   NPSKTLEGVHGIHVVPHSP-FALKEINQQGDFPQSTCESSGNGLNQLLLMQRVWQQRPGC 67

Query: 162 LRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGVASSLYHS 221
           LRP+ GCI GD+++AE VANV+TSLPFIALGIQAPRKN  T+LYANSLIGVGVASSLYHS
Sbjct: 68  LRPIQGCIHGDQHLAETVANVITSLPFIALGIQAPRKNLNTKLYANSLIGVGVASSLYHS 127

Query: 222 SRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMME 281
           SRGKLR+YLRW DYTMIATATVCL+ ALRN+NP+ LMAASA LLP++P  VSA+HTGMME
Sbjct: 128 SRGKLRKYLRWFDYTMIATATVCLSRALRNENPKFLMAASAALLPIQPLMVSAIHTGMME 187

Query: 282 VMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAVGVGTCNK 341
           V FAKRALKDPDLRMAHN+HK+S+LLGGVLF+ADD FP TPF+HA WHLAAA+GVGTCNK
Sbjct: 188 VAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDCFPSTPFLHAGWHLAAAIGVGTCNK 247

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BLAST of CmaCh15G009580 vs. TrEMBL
Match: B9SJ64_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0843790 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.7e-96
Identity = 177/259 (68.34%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 89  LVTETLMGIYNK---SNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGS----S 148
           L+   L+ I N+   +N S+ALEG+HG+ VVP S  FALE+ +  GDFS  +CG+    +
Sbjct: 5   LLATILIDIMNRQSTTNPSKALEGVHGIHVVPHSP-FALEEITHQGDFSQSTCGNLVNRA 64

Query: 149 SALSVNQWVWEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLY 208
           +   + Q  WEQRP CLRP+  CI GD+++AE VANVLTSLPFIALG+QAPRKN  T++Y
Sbjct: 65  NQQLLLQRAWEQRPGCLRPIRCCINGDKHLAETVANVLTSLPFIALGLQAPRKNLTTKMY 124

Query: 209 ANSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLL 268
           ANSLIGVGVASSLYHSSRG++R+YLRW DYTMIAT TVCL+ ALRN+NP++LMAASA LL
Sbjct: 125 ANSLIGVGVASSLYHSSRGRIRKYLRWLDYTMIATTTVCLSRALRNENPKLLMAASAALL 184

Query: 269 PLRPFTVSALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIH 328
           P++P  VS +HTGMMEV FAKRALKDPDLRMAHN+HK+S+LLGGVLF+ADD FP TPFIH
Sbjct: 185 PIKPLMVSVVHTGMMEVAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDLFPSTPFIH 244

Query: 329 AAWHLAAAVGVGTCNKLLE 341
           A WH+AAAVGVGTCNKLLE
Sbjct: 245 AGWHIAAAVGVGTCNKLLE 262

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BLAST of CmaCh15G009580 vs. TrEMBL
Match: M5Y006_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010437mg PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.9e-96
Identity = 177/244 (72.54%), Postives = 205/244 (84.02%), Query Frame = 1 

Query: 102 NSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALSVNQW-----VWEQRPS 161
           N SRALEG+HGV VVP S  F  E+ ++DGD    +CGSS A+  NQ      VW+QRP 
Sbjct: 8   NPSRALEGMHGVRVVPYSL-FESEETTQDGDLPHSTCGSS-AVGANQQLFMQRVWQQRPP 67

Query: 162 CLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGVASSLYH 221
           CL+P+ GCIQGD ++ E VANVLTSLPFI LGI APRKN  +++YANSLIGVGVASSLYH
Sbjct: 68  CLKPIQGCIQGDHSVVETVANVLTSLPFIVLGIHAPRKNLNSKIYANSLIGVGVASSLYH 127

Query: 222 SSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMM 281
           SSRGKLRQYLRWADYTMIATATVCL+ ALRN+NP++LMAASA  LP++P  VSA+HTG+M
Sbjct: 128 SSRGKLRQYLRWADYTMIATATVCLSRALRNENPKLLMAASALFLPIQPLMVSAVHTGIM 187

Query: 282 EVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAVGVGTCN 341
           EV FAKRALKDP+LR AHNVHK+S+L+GGVLF+ADD FPQTPF+HAAWHLAAAVGV TCN
Sbjct: 188 EVAFAKRALKDPELRTAHNVHKMSSLVGGVLFIADDMFPQTPFLHAAWHLAAAVGVSTCN 247

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BLAST of CmaCh15G009580 vs. TAIR10
Match: AT1G23110.1 (AT1G23110.1 unknown protein)

HSP 1 Score: 332.8 bits (852), Expect = 2.5e-91
Identity = 163/251 (64.94%), Postives = 198/251 (78.88%), Query Frame = 1 

Query: 95  MGIYNKSNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALSVNQWV---- 154
           M + N S SS ALEG+HGV V   S  F+ EK ++  DF T +   SS +  NQ +    
Sbjct: 1   MSLQNVSKSSNALEGIHGVHVTSHSP-FSFEKTTQVSDFQTNT--KSSVMESNQRLSIER 60

Query: 155 -WEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVG 214
            W+QRP CLRP+   I+GD+++ E  ANV TSLPFI LG+QAPRKN  T++YANSLIGVG
Sbjct: 61  FWQQRPPCLRPICCSIRGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVG 120

Query: 215 VASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVS 274
           +ASSLYH+SRGKLR+YLRW DYTMIAT T+CL+ ALRN+NP+ LMAASA +LP +P  VS
Sbjct: 121 IASSLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVS 180

Query: 275 ALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAA 334
           A+HTGMMEV FAKR+LKDPDL+ AHNVHK+S+LLGG LF+ADD FP+TPF+HA WHLAAA
Sbjct: 181 AVHTGMMEVAFAKRSLKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAA 240

Query: 335 VGVGTCNKLLE 341
           +GVGTCNKLLE
Sbjct: 241 IGVGTCNKLLE 248

[Close]
BLAST of CmaCh15G009580 vs. TAIR10
Match: AT1G70900.1 (AT1G70900.1 unknown protein)

HSP 1 Score: 328.2 bits (840), Expect = 6.1e-90
Identity = 157/240 (65.42%), Postives = 191/240 (79.58%), Query Frame = 1 

Query: 101 SNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALSVNQWVWEQRPSCLRP 160
           S +S++LEG+HGV VV  S  F  E   +   F +   G+   L + + VW+QRP CLRP
Sbjct: 7   SKTSKSLEGVHGVHVVSHSH-FGFESIGQVSGFESADAGTKQRLFIER-VWQQRPPCLRP 66

Query: 161 VGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGVASSLYHSSRG 220
           +   I GD++I E  ANV+TS+PFI LG+QAPRKN   ++YANSLIGVG+ASSLYHSSRG
Sbjct: 67  IHCSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGIASSLYHSSRG 126

Query: 221 KLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMMEVMF 280
           K R+YLRWADYTMIATAT+CLT ALR +NP+ LMAASA  LP +P  VSA+HTGMMEV F
Sbjct: 127 KFRKYLRWADYTMIATATICLTRALREENPKFLMAASALALPFQPLVVSAVHTGMMEVAF 186

Query: 281 AKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAVGVGTCNKLLE 340
           AKRAL+DPDL+MAH+VHK+S+LLGG LF+ADD FP+TPFIHA WHLAAA+GVGTCNKLL+
Sbjct: 187 AKRALEDPDLKMAHDVHKMSSLLGGALFIADDLFPETPFIHAGWHLAAAIGVGTCNKLLQ 244

[Close]
BLAST of CmaCh15G009580 vs. NCBI nr
Match: gi|659072858|ref|XP_008467131.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504559 [Cucumis melo])

HSP 1 Score: 443.0 bits (1138), Expect = 4.8e-121
Identity = 220/260 (84.62%), Postives = 239/260 (91.92%), Query Frame = 1 

Query: 86  MIRLVTETLMGIYNKSNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALS 145
           MI+L+TETLMGI NKSNSSRALEGLHGV +V  SQ FA+EK ++DG+FS  SCG+S A+S
Sbjct: 1   MIQLITETLMGIQNKSNSSRALEGLHGVTIVAESQ-FAVEKTTQDGEFSQSSCGNS-AIS 60

Query: 146 VN-----QWVWEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRL 205
           VN     QWVWEQRPSCLRPVGGCIQGDRN+AERVANVLTSLPFIALGIQAPR+NF  +L
Sbjct: 61  VNQPFLKQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRRNFSMKL 120

Query: 206 YANSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFL 265
           YANSLIGVGVASSLYHSSRGK+RQYLRWADYTMIA ATVCLTGAL+NDNP++LMAASA L
Sbjct: 121 YANSLIGVGVASSLYHSSRGKVRQYLRWADYTMIAAATVCLTGALKNDNPKLLMAASALL 180

Query: 266 LPLRPFTVSALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFI 325
           LPLRPFTVSALHTGMMEV+FAKRALKDPDLRMAHNVHK+STLLGG  F+ADDA PQTPFI
Sbjct: 181 LPLRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTLLGGXFFIADDALPQTPFI 240

Query: 326 HAAWHLAAAVGVGTCNKLLE 341
           HAAWHLAAAVGVGTCNKLLE
Sbjct: 241 HAAWHLAAAVGVGTCNKLLE 258

[Close]
BLAST of CmaCh15G009580 vs. NCBI nr
Match: gi|449465761|ref|XP_004150596.1| (PREDICTED: uncharacterized protein LOC101204891 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 1.1e-120
Identity = 219/260 (84.23%), Postives = 238/260 (91.54%), Query Frame = 1 

Query: 86  MIRLVTETLMGIYNKSNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALS 145
           MI+L+TETLMGI NKSNSSRALEGLHGV +V  SQ F +EK ++DG+FS  SCG+S  +S
Sbjct: 1   MIQLITETLMGIQNKSNSSRALEGLHGVTIVAESQ-FTVEKTTQDGEFSQSSCGNS-VIS 60

Query: 146 VN-----QWVWEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRL 205
           VN     QWVWEQRPSCLRPVGGCIQGDRN+AERVANVLTSLPFIALG+QAPR+NF  +L
Sbjct: 61  VNQSLLKQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGVQAPRRNFSMKL 120

Query: 206 YANSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFL 265
           YANSLIGVGVASSLYHSSRGK+RQYLRWADYTMIA ATVCLTGAL+NDNP++LMAASA L
Sbjct: 121 YANSLIGVGVASSLYHSSRGKVRQYLRWADYTMIAAATVCLTGALKNDNPKLLMAASALL 180

Query: 266 LPLRPFTVSALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFI 325
           LPLRPFTVSALHTGMMEV+FAKRALKDPDLRMAHNVHK+STLLGGVLFVADD  PQTPFI
Sbjct: 181 LPLRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTLLGGVLFVADDVLPQTPFI 240

Query: 326 HAAWHLAAAVGVGTCNKLLE 341
           HAAWHLAAAVGVGTCNKLLE
Sbjct: 241 HAAWHLAAAVGVGTCNKLLE 258

[Close]
BLAST of CmaCh15G009580 vs. NCBI nr
Match: gi|225424250|ref|XP_002284485.1| (PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera])

HSP 1 Score: 364.4 bits (934), Expect = 2.2e-97
Identity = 180/250 (72.00%), Postives = 208/250 (83.20%), Query Frame = 1 

Query: 95  MGIYNKSNSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALSVNQ----WV 154
           M   +KSN SRAL+G+HGV VVP S  FALE+ ++ GDF   +C  SS +  NQ     V
Sbjct: 1   MSHQSKSNPSRALDGVHGVRVVPHSP-FALEEITKPGDFDRSTCERSS-IEANQRLLMQV 60

Query: 155 WEQRPSCLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGV 214
           W+QRP+CLRPV  C+ GD ++ E VANVLTSLPFIALGIQAPRKN   +LYANSLIGVG+
Sbjct: 61  WQQRPACLRPVRCCLNGDESLGETVANVLTSLPFIALGIQAPRKNLNCKLYANSLIGVGI 120

Query: 215 ASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSA 274
           AS LYHSSRGKLR+YLRWADYTMIATATVCL+ A+RN+NP++LMAASAF LP++P  VSA
Sbjct: 121 ASGLYHSSRGKLRKYLRWADYTMIATATVCLSRAIRNENPKLLMAASAFFLPIQPLMVSA 180

Query: 275 LHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAV 334
           +HTGMMEV FAKRAL DPDLRM HNVHK+S+LLGG LF+ADD FP+TPFIHAAWHLAAAV
Sbjct: 181 VHTGMMEVAFAKRALDDPDLRMVHNVHKMSSLLGGALFIADDVFPRTPFIHAAWHLAAAV 240

Query: 335 GVGTCNKLLE 341
           GVGTCNKLLE
Sbjct: 241 GVGTCNKLLE 248

[Close]
BLAST of CmaCh15G009580 vs. NCBI nr
Match: gi|224108313|ref|XP_002314801.1| (hypothetical protein POPTR_0010s12140g [Populus trichocarpa])

HSP 1 Score: 362.8 bits (930), Expect = 6.3e-97
Identity = 176/243 (72.43%), Postives = 207/243 (85.19%), Query Frame = 1 

Query: 102 NSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSS----SALSVNQWVWEQRPSC 161
           N S+ LEG+HG+ VVP S  FAL++ ++ GDF   +C SS    + L + Q VW+QRP C
Sbjct: 8   NPSKTLEGVHGIHVVPHSP-FALKEINQQGDFPQSTCESSGNGLNQLLLMQRVWQQRPGC 67

Query: 162 LRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGVASSLYHS 221
           LRP+ GCI GD+++AE VANV+TSLPFIALGIQAPRKN  T+LYANSLIGVGVASSLYHS
Sbjct: 68  LRPIQGCIHGDQHLAETVANVITSLPFIALGIQAPRKNLNTKLYANSLIGVGVASSLYHS 127

Query: 222 SRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMME 281
           SRGKLR+YLRW DYTMIATATVCL+ ALRN+NP+ LMAASA LLP++P  VSA+HTGMME
Sbjct: 128 SRGKLRKYLRWFDYTMIATATVCLSRALRNENPKFLMAASAALLPIQPLMVSAIHTGMME 187

Query: 282 VMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAVGVGTCNK 341
           V FAKRALKDPDLRMAHN+HK+S+LLGGVLF+ADD FP TPF+HA WHLAAA+GVGTCNK
Sbjct: 188 VAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDCFPSTPFLHAGWHLAAAIGVGTCNK 247

[Close]
BLAST of CmaCh15G009580 vs. NCBI nr
Match: gi|645276626|ref|XP_008243376.1| (PREDICTED: uncharacterized protein LOC103341607 [Prunus mume])

HSP 1 Score: 362.5 bits (929), Expect = 8.3e-97
Identity = 179/244 (73.36%), Postives = 206/244 (84.43%), Query Frame = 1 

Query: 102 NSSRALEGLHGVAVVPGSQQFALEKASRDGDFSTLSCGSSSALSVNQW-----VWEQRPS 161
           N SRALEG+HGV VVP S  F  E+ ++DGD    +CGSS A+  NQ      VW+QRP 
Sbjct: 8   NPSRALEGMHGVRVVPRSL-FESEEITQDGDLPHSTCGSS-AVGANQQLFMQRVWQQRPP 67

Query: 162 CLRPVGGCIQGDRNIAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGVASSLYH 221
           CL+P+ GCIQGD ++ E VANVLTSLPFI LGIQAPRKN  +++YANSLIGVGVASSLYH
Sbjct: 68  CLKPIQGCIQGDHSVVETVANVLTSLPFIVLGIQAPRKNLNSKIYANSLIGVGVASSLYH 127

Query: 222 SSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMM 281
           SSRGKLRQYLRWADYTMIATATVCL+ ALRN+NP++LMAASA  LP++P  VSA+HTG+M
Sbjct: 128 SSRGKLRQYLRWADYTMIATATVCLSRALRNENPKLLMAASALFLPIQPLMVSAVHTGIM 187

Query: 282 EVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDAFPQTPFIHAAWHLAAAVGVGTCN 341
           EV FAKRALKDP+LR AHNVHK+S+L+GGVLFVADD FPQTPF+HAAWHLAAAVGV TCN
Sbjct: 188 EVAFAKRALKDPELRTAHNVHKMSSLVGGVLFVADDMFPQTPFLHAAWHLAAAVGVSTCN 247

The following BLAST results are available for this feature:
BLAST of CmaCh15G009580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh15G009580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPJ5_CUCSA7.5e-12184.23Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570380 PE=4 SV=1[more]
A5BL15_VITVI1.5e-9772.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05030 PE=4 SV=... [more]
B9HW55_POPTR4.4e-9772.43Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12140g PE=4 SV=1[more]
B9SJ64_RICCO1.7e-9668.34Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0843790 PE=4 SV=1[more]
M5Y006_PRUPE2.9e-9672.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010437mg PE=4 SV=1[more]
BLAST of CmaCh15G009580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G23110.12.5e-9164.94 unknown protein[more]
AT1G70900.16.1e-9065.42 unknown protein[more]
BLAST of CmaCh15G009580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072858|ref|XP_008467131.1|4.8e-12184.62PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504559 [Cucumis me... [more]
gi|449465761|ref|XP_004150596.1|1.1e-12084.23PREDICTED: uncharacterized protein LOC101204891 [Cucumis sativus][more]
gi|225424250|ref|XP_002284485.1|2.2e-9772.00PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera][more]
gi|224108313|ref|XP_002314801.1|6.3e-9772.43hypothetical protein POPTR_0010s12140g [Populus trichocarpa][more]
gi|645276626|ref|XP_008243376.1|8.3e-9773.36PREDICTED: uncharacterized protein LOC103341607 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G009580.1CmaCh15G009580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35100FAMILY NOT NAMEDcoord: 95..340
score: 3.0E
NoneNo IPR availablePANTHERPTHR35100:SF1F15H11.13 PROTEINcoord: 95..340
score: 3.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh15G009580Cucsa.280340Cucumber (Gy14) v1cgycmaB0775
CmaCh15G009580Cla003928Watermelon (97103) v1cmawmB273
CmaCh15G009580Csa5G570380Cucumber (Chinese Long) v2cmacuB301
CmaCh15G009580MELO3C005303Melon (DHL92) v3.5.1cmameB258
CmaCh15G009580ClCG01G006270Watermelon (Charleston Gray)cmawcgB257
CmaCh15G009580CSPI05G19550Wild cucumber (PI 183967)cmacpiB306
CmaCh15G009580CmoCh04G022240Cucurbita moschata (Rifu)cmacmoB310
CmaCh15G009580CmoCh15G009970Cucurbita moschata (Rifu)cmacmoB287
CmaCh15G009580Lsi09G006620Bottle gourd (USVL1VR-Ls)cmalsiB263
CmaCh15G009580Cp4.1LG13g03720Cucurbita pepo (Zucchini)cmacpeB305
CmaCh15G009580Cp4.1LG01g18470Cucurbita pepo (Zucchini)cmacpeB319
CmaCh15G009580MELO3C005303.2Melon (DHL92) v3.6.1cmamedB293
CmaCh15G009580CsaV3_5G028400Cucumber (Chinese Long) v3cmacucB0355
CmaCh15G009580Cla97C01G006580Watermelon (97103) v2cmawmbB286
CmaCh15G009580Bhi12G000785Wax gourdcmawgoB0366
CmaCh15G009580CsGy5G019050Cucumber (Gy14) v2cgybcmaB611
CmaCh15G009580Carg26342Silver-seed gourdcarcmaB0263
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh15G009580CmaCh04G021270Cucurbita maxima (Rimu)cmacmaB327
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh15G009580Silver-seed gourdcarcmaB0593
CmaCh15G009580Silver-seed gourdcarcmaB1455
CmaCh15G009580Cucurbita maxima (Rimu)cmacmaB315
CmaCh15G009580Cucurbita moschata (Rifu)cmacmoB301
CmaCh15G009580Cucurbita pepo (Zucchini)cmacpeB310