Carg26342 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCAGTTCAACATAGGGGTTTGCACTGGACATAGTCATATTGTTCGATGCCAGCAGAGTGTTGCTGGCATTGAGAATGATTCGGCTTCTTACTGAAACTCTGATGGGTATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTACTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTTCATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAGTAAGTTAACATGAAAACTGATAAAGCTTTGTATTATTTGTTCACAAACAGCTTACAATATTAGGATGTTCATAGAGCTCTTACCAATTAACGGTTTGTTCATGATCTTCAGATGGGTATGGGAGCAGAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTATAGTCTTGAAATCTCTTCACCTTCGTAGTCATACATCATCTCGCAATGCTGGATTTTATGTGAGATCCTATATTGGTTAGAGAGGAAAACGAAACATTCTTTATAAGAATGTGGAAACCTCTCCCAGTTAGATGCTCTTTTAAAAACCTTGAGGGGAAATCCGGAATGGAAAATCCAAAGAGGACAATATCTGCTAGCGGTGTGCTTGAGCTGTTACAAATGGTATCAAAGCCAAACACCAGGCAGTGTGCTAGCGAGCTCCGAAGAGGGGGGATTATGAGATCCACATCAATCGGAGAAAGGAAGGGAAAACCCAAGAGGACTTAAAAGAGAGTCCCAAGGCTTTAGTACTATATATAAATGGCTTCAAAATGTTTATCCTCTTGTTATTTGGTTGGTAGGTGATCGGAATATGGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGTAGGTAACTACTGCCCAAAGTTTTCGACATATGTGTGTGTAGGTGCTTGTCTGATTATTTGGCTGTTTACTTGGAACACAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGAGTAGGAGTTGCTTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTAAGATGGGCCGACTACACAATGATCGCTACAGCCACGGTGGTAAGTTAGTAATGGATTTGTTTATTGGCATAGGACAAAAGTGTAACAACCCTAGATTTCTACTAACCTAAAGCCGTTACCGTCATCATAATCTATACTCTTATGCGGAATTAAACATTTAATACTTCATCATAAAACACTACCATGGACTTATGTATTCGAAAACATCTTTAAAACACATAACGAAATGCTAAATGAAATAAACAAACAATAAAAGTAAAAACACCCTATGCTAACCTAAAGTCTAAGAAATAAAATACCACTATTCTATGCATATGTCATGGTCTTGACTTGCGATGTCGTTGTCAGCTAAACAGGGATGCATTGCCTTTACCTGAAATAAAAGTATAAAAGTAGCACACTGCTTTAGTATTTTAAGTGACCCCACTATTGGTATCAGGAAATGCAAACACATGCAACTCATTATTAAGGACTTATCGTGAAAACCATCATAGGGGTGACCTCCAGTTCGGACAAAATTGGATGTGTAGTACTTTTCTACACACGATCCACATGTGCGAGTGTGGATCCCTAAGTGTTTCGCACCCCCCTAGACCCATCATAGTCAAGCTAGCATTTGTAGCGATGTTCGGAGATCTGCAGACCTCGAGTGTCATGCGAGGCATGATCATTATCATCATCATAGTGTACACGTCTGTACTTATCATCATCATAGTGTACACGTCCGTATTCATCATTATAAATGGGGAAGTATCCCGATGTATGTAACAGTGGGCTTGCTGGGTTGGAGAACGAATCCCACATCGGTTGAGGTGGAGAACGAATCATTCTTTACATGGGTGTGGAAATGTTTCCCTAGCAGACACGTTTTACAAACCTTGAGGGAAAGTCCAAAAAAGGACAATATCGAATAGGAGTGGGGTTGCTGTTACAAAAGGGCTAGTTTTCTGAGTTACCCACTCACATAAGGCTTAAAACTTGCTACCATGGGCTATGAGGTGTTTTACTTTGAGTTGGTTTTGTATGCTTATTTGAACTTAGATTTTCTCATGTCTCGAACTATATTGCAGTGTCTGACAGGAGCTTTAAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCACACTGGGATGATGGAGGTAACATTTTGCTCATGCCTTTGCATGATTAGTTGGTCAATATTGATATTGATATGTTTGATTACGAAACTCAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGATTAATTGTGTTCATAATACAAACATAAATTTGTCGACGCCTCAGCCTCTTGCTTTCTTGGAGTAGTTGTTCACAATTATTTTTCTTTCAAATGGGATTAAAACAACCTTACAACTTTTTTTTGTTTTTATTTTCACCGCCCAAGTGAGGCACGTTAGAACATCAATATTTGAACTTCATGACACTATTTTGCATTCATTTTAGTGGGGAAGCTATGAAGCGGTTGTCTTGAAATAATTTTGAATGTCAAGTGTTGAAATGAAATGTTGTGAATCAATAAGATTGAAACTTAGCATATAATTGTATTATTGTACATGTTATCACTGCC TGTGCAGTTCAACATAGGGGTTTGCACTGGACATAGTCATATTGTTCGATGCCAGCAGAGTGTTGCTGGCATTGAGAATGATTCGGCTTCTTACTGAAACTCTGATGGGTATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTACTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTTCATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAATGGGTATGGGAGCAGAGACCATCCTGTGATCGGAATATGGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGATGTCTGACAGGAGCTTTAAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCACACTGGGATGATGGAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGATTAATTGTGTTCATAATACAAACATAAATTTGTCGACGCCTCAGCCTCTTGCTTTCTTGGAGTAGTTGTTCACAATTATTTTTCTTTCAAATGGGATTAAAACAACCTTACAACTTTTTTTTGTTTTTATTTTCACCGCCCAAGTGAGGCACGTTAGAACATCAATATTTGAACTTCATGACACTATTTTGCATTCATTTTAGTGGGGAAGCTATGAAGCGGTTGTCTTGAAATAATTTTGAATGTCAAGTGTTGAAATGAAATGTTGTGAATCAATAAGATTGAAACTTAGCATATAATTGTATTATTGTACATGTTATCACTGCC ATGATTCGGCTTCTTACTGAAACTCTGATGGGTATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTACTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTTCATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAATGGGTATGGGAGCAGAGACCATCCTGTGATCGGAATATGGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGATGTCTGACAGGAGCTTTAAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCACACTGGGATGATGGAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGA MIRLLTETLMGIYNKSNSSRALEGLHGVTVVPGSQQFALEKASRDGDFSSLSCGSSSALSVNQWVWEQRPSCDRNMAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDALPQTPFIHAAWHLAAAVGVGTCNKLLE
BLAST of Carg26342 vs. NCBI nr
Match: XP_022938939.1 (uncharacterized protein LOC111445000 [Cucurbita moschata]) HSP 1 Score: 400.6 bits (1028), Expect = 3.3e-108 Identity = 211/255 (82.75%), Postives = 212/255 (83.14%), Query Frame = 0
BLAST of Carg26342 vs. NCBI nr
Match: XP_023549509.1 (uncharacterized protein LOC111807990 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 399.8 bits (1026), Expect = 5.7e-108 Identity = 210/255 (82.35%), Postives = 212/255 (83.14%), Query Frame = 0
BLAST of Carg26342 vs. NCBI nr
Match: XP_022993088.1 (uncharacterized protein LOC111489209 [Cucurbita maxima]) HSP 1 Score: 396.4 bits (1017), Expect = 6.3e-107 Identity = 208/255 (81.57%), Postives = 211/255 (82.75%), Query Frame = 0
BLAST of Carg26342 vs. NCBI nr
Match: XP_022959909.1 (uncharacterized protein LOC111460821 [Cucurbita moschata]) HSP 1 Score: 342.8 bits (878), Expect = 8.3e-91 Identity = 185/259 (71.43%), Postives = 200/259 (77.22%), Query Frame = 0
BLAST of Carg26342 vs. NCBI nr
Match: XP_022990677.1 (uncharacterized protein LOC111487494 [Cucurbita maxima]) HSP 1 Score: 340.5 bits (872), Expect = 4.1e-90 Identity = 184/259 (71.04%), Postives = 199/259 (76.83%), Query Frame = 0
BLAST of Carg26342 vs. TAIR10
Match: AT1G23110.1 (unknown protein) HSP 1 Score: 236.5 bits (602), Expect = 1.5e-62 Identity = 130/250 (52.00%), Postives = 160/250 (64.00%), Query Frame = 0
BLAST of Carg26342 vs. TAIR10
Match: AT1G70900.1 (unknown protein) HSP 1 Score: 231.5 bits (589), Expect = 4.9e-61 Identity = 123/240 (51.25%), Postives = 153/240 (63.75%), Query Frame = 0
BLAST of Carg26342 vs. TrEMBL
Match: tr|A0A1S3CT02|A0A1S3CT02_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103504559 OS=Cucumis melo OX=3656 GN=LOC103504559 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 7.9e-90 Identity = 182/260 (70.00%), Postives = 200/260 (76.92%), Query Frame = 0
BLAST of Carg26342 vs. TrEMBL
Match: tr|A0A0A0KPJ5|A0A0A0KPJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570380 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.8e-89 Identity = 181/260 (69.62%), Postives = 199/260 (76.54%), Query Frame = 0
BLAST of Carg26342 vs. TrEMBL
Match: tr|A0A2P4LU47|A0A2P4LU47_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_39263 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69 Identity = 151/260 (58.08%), Postives = 180/260 (69.23%), Query Frame = 0
BLAST of Carg26342 vs. TrEMBL
Match: tr|A0A2I4GG64|A0A2I4GG64_9ROSI (uncharacterized protein LOC109007589 OS=Juglans regia OX=51240 GN=LOC109007589 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.1e-67 Identity = 142/242 (58.68%), Postives = 167/242 (69.01%), Query Frame = 0
BLAST of Carg26342 vs. TrEMBL
Match: tr|B9SJ64|B9SJ64_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0843790 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.1e-67 Identity = 144/259 (55.60%), Postives = 175/259 (67.57%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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