CmoCh04G022240 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G022240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cytosolic fe-s cluster assembly factor nar1
Location	Cmo_Chr04 : 16618581 .. 16620611 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAGCTTATTACTGAAACTCTGATGGGTACCCAGAATAAATCGAACTCTTGTAGAGCCCTTGAAGGTCTGCATGGGGTTACTGTTGTGCCTGATTCACACTTCGCGCTGGATGAGACTACACGTGATGGGAAGTTTTCTCAGTTGAATTGTGGAAGTTCAGCTTTAAGTGTGAACCAGCCATTGATTATGCAGTAAGTACACACCCAGATTTCCACCAGCTTTAATAGGGTGAATGACAAAATGTTACCATGCCGTTGTCTTAACAGCTTTTTTCATGATCTTCAGATGGGTATGGGAGCAAAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTATAGTCTTGAAATTGTTTCACCTTCGTAGCATGTTTTCCTGAAATGTTCTCTGGAGGAGGCTTGAACCTAGGACCTTGAGAGTTCTCTAGCATTATTTATAGAAAATTCCTAGATATTTATCCTTTTGTTATTTTGTTGGTAGGTGATCGGAATCTGGCTGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATAGCTCTAGGAATTCAGGCACCAAGGTAATGAGTGCTGAAAATTTTCTTGCAACAATAGATGCATCTGTCTTGGTGTTTGTCTGATCATTTGAGTTTTCTTTTGAACACAGGAAGAATTTCTCAATGAAGCTATATGCTAATTCATTGATTGGAGTTGGAGTTGCCTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTTAGATGGGCTGACTACACAATGATAGCTACAGCCACGGTGGTAAGTTCAAGTCGAATTGTTTATTGAAATAGACTAAGTGGCTACTTTACTGGGTTGCCAACTCTCCTAAGGCATAAAACTTGCTACTGTGGGCTCTCTCTAATGTTAAAGTATGATTAGGCTTTTATGCTTTGAGTTCCTTTTGTATGCATATTTGAAGTATCAATTGTCCAGGACAACGCTTGATATACTGGTAGTCATTCTAAACTATGTTGCAGTGTTTGACAGGAGCTCTCAGAAATGACAACCCGAAGTTGTTGATGGCTGCATCTGCATTTCTATTACCTTTGAGGCCTTTTACGGTTTCTGCTCTTCACACAGGGATGATGGAGGTAACCTTTTGGTGTCACTGTTATCTACCGTTCATTCCTTTACATGTTTCAATATTCTTTATGTTTCTGAAATCAATTGGCAGCATTCTATAGAAAGATCTGTTGAATGAAGCTTCATTTGCATACGTTAATGGTTTACTTATGTAATTTACATTTTTATTTCATGACTCAGGTAATATTTGCAAAAAGAGCTTTGAAGGATCCAGATTTAAGGATGGCTCACAATGTGCATAAGATGTCAACAATATTAGGTGGTGTACTTTTCATTGCTGATGATGCTTTGCCCAAAACTCCATTTATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGTAATAAGCTTCTTGTGTAATTGTTCACAAGAAACATAAATTCGTCGACGTCTCAGTCTTGCTTTCTCGAAGAGCAGCATTATACCCTTGGAGGATTATCTCTGCTGGTCGTTATTTATCGCGATCCAGGTTCGATCAATGATTGCTCTATCAGATTAGTTTTTTTTTCCCATGGAATTGTAACTTATTCAAGAGTAGACAAGAACAGCTATGCAAAAATACTCATCTCTGAAAAGCTTTTGAATGTAATGAATAAGCAATTGTTTACATGTTTTGTTGTTATAACAACAGAGATATCCAAAACGAATATGAAAAGATATATCTAACAAAACTACACTCACACTTTTACAGTATTGATCTGCACTCTTAACCTAAAACCTATGACAAAAATCTCAGGAACAATGGGAAGAAAAGAATAACTATGGTGAACAAACAAGTGTTTTTCTACAGCTTGTTAGATACAGCAGCTGCAGTTTCAAAGGTAAAACAAAAACAATGCCTCAGCCAAAACCTTACAAATGCTCTCAACCAAAATAAACTGCGGTCGTCCAAATCTTAG

mRNA sequence

ATGATTCAGCTTATTACTGAAACTCTGATGGGTACCCAGAATAAATCGAACTCTTGTAGAGCCCTTGAAGGTCTGCATGGGGTTACTGTTGTGCCTGATTCACACTTCGCGCTGGATGAGACTACACGTGATGGGAAGTTTTCTCAGTTGAATTGTGGAAGTTCAGCTTTAAGTGTGAACCAGCCATTGATTATGCAATGGGTATGGGAGCAAAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATCTGGCTGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATAGCTCTAGGAATTCAGGCACCAAGGAAGAATTTCTCAATGAAGCTATATGCTAATTCATTGATTGGAGTTGGAGTTGCCTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTTAGATGGGCTGACTACACAATGATAGCTACAGCCACGGTGTGTTTGACAGGAGCTCTCAGAAATGACAACCCGAAGTTGTTGATGGCTGCATCTGCATTTCTATTACCTTTGAGGCCTTTTACGGTTTCTGCTCTTCACACAGGGATGATGGAGGTAATATTTGCAAAAAGAGCTTTGAAGGATCCAGATTTAAGGATGGCTCACAATGTGCATAAGATGTCAACAATATTAGGTGGTGTACTTTTCATTGCTGATGATGCTTTGCCCAAAACTCCATTTATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGTAATAAGCTTCTTGTGAACAATGGGAAGAAAAGAATAACTATGGTGAACAAACAAGTGTTTTTCTACAGCTTGTTAGATACAGCAGCTGCAGTTTCAAAGGTAAAACAAAAACAATGCCTCAGCCAAAACCTTACAAATGCTCTCAACCAAAATAAACTGCGGTCGTCCAAATCTTAG

Coding sequence (CDS)

ATGATTCAGCTTATTACTGAAACTCTGATGGGTACCCAGAATAAATCGAACTCTTGTAGAGCCCTTGAAGGTCTGCATGGGGTTACTGTTGTGCCTGATTCACACTTCGCGCTGGATGAGACTACACGTGATGGGAAGTTTTCTCAGTTGAATTGTGGAAGTTCAGCTTTAAGTGTGAACCAGCCATTGATTATGCAATGGGTATGGGAGCAAAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATCTGGCTGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATAGCTCTAGGAATTCAGGCACCAAGGAAGAATTTCTCAATGAAGCTATATGCTAATTCATTGATTGGAGTTGGAGTTGCCTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTTAGATGGGCTGACTACACAATGATAGCTACAGCCACGGTGTGTTTGACAGGAGCTCTCAGAAATGACAACCCGAAGTTGTTGATGGCTGCATCTGCATTTCTATTACCTTTGAGGCCTTTTACGGTTTCTGCTCTTCACACAGGGATGATGGAGGTAATATTTGCAAAAAGAGCTTTGAAGGATCCAGATTTAAGGATGGCTCACAATGTGCATAAGATGTCAACAATATTAGGTGGTGTACTTTTCATTGCTGATGATGCTTTGCCCAAAACTCCATTTATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGTAATAAGCTTCTTGTGAACAATGGGAAGAAAAGAATAACTATGGTGAACAAACAAGTGTTTTTCTACAGCTTGTTAGATACAGCAGCTGCAGTTTCAAAGGTAAAACAAAAACAATGCCTCAGCCAAAACCTTACAAATGCTCTCAACCAAAATAAACTGCGGTCGTCCAAATCTTAG

Homology

[Close]

BLAST of CmoCh04G022240 vs. TrEMBL
Match: A0A0A0KPJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570380 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 2.8e-130
Identity = 227/257 (88.33%), Postives = 245/257 (95.33%), Query Frame = 1


Query: 1   MIQLITETLMGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVN 60
           MIQLITETLMG QNKSNS RALEGLHGVT+V +S F +++TT+DG+FSQ +CG+S +SVN
Sbjct: 1   MIQLITETLMGIQNKSNSSRALEGLHGVTIVAESQFTVEKTTQDGEFSQSSCGNSVISVN 60

Query: 61  QPLIMQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYA 120
           Q L+ QWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALG+QAPR+NFSMKLYA
Sbjct: 61  QSLLKQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGVQAPRRNFSMKLYA 120

Query: 121 NSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLP 180
           NSLIGVGVASSLYHSSRGK+RQYLRWADYTMIA ATVCLTGAL+NDNPKLLMAASA LLP
Sbjct: 121 NSLIGVGVASSLYHSSRGKVRQYLRWADYTMIAAATVCLTGALKNDNPKLLMAASALLLP 180

Query: 181 LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHA 240
           LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMST+LGGVLF+ADD LP+TPFIHA
Sbjct: 181 LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTLLGGVLFVADDVLPQTPFIHA 240

Query: 241 AWHLAAAVGVGTCNKLL 258
           AWHLAAAVGVGTCNKLL
Sbjct: 241 AWHLAAAVGVGTCNKLL 257

[Close]

BLAST of CmoCh04G022240 vs. TrEMBL
Match: A5BL15_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05030 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.9e-103
Identity = 185/248 (74.60%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  Q+KSN  RAL+G+HGV VVP S FAL+E T+ G F +  C  S++  NQ L+MQ VW
Sbjct: 1   MSHQSKSNPSRALDGVHGVRVVPHSPFALEEITKPGDFDRSTCERSSIEANQRLLMQ-VW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP+CLRPV  C+ GD +L E VANVLTSLPFIALGIQAPRKN + KLYANSLIGVG+A
Sbjct: 61  QQRPACLRPVRCCLNGDESLGETVANVLTSLPFIALGIQAPRKNLNCKLYANSLIGVGIA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           S LYHSSRGKLR+YLRWADYTMIATATVCL+ A+RN+NPKLLMAASAF LP++P  VSA+
Sbjct: 121 SGLYHSSRGKLRKYLRWADYTMIATATVCLSRAIRNENPKLLMAASAFFLPIQPLMVSAV 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTGMMEV FAKRAL DPDLRM HNVHKMS++LGG LFIADD  P+TPFIHAAWHLAAAVG
Sbjct: 181 HTGMMEVAFAKRALDDPDLRMVHNVHKMSSLLGGALFIADDVFPRTPFIHAAWHLAAAVG 240

Query: 250 VGTCNKLL 258
           VGTCNKLL
Sbjct: 241 VGTCNKLL 247

[Close]

BLAST of CmoCh04G022240 vs. TrEMBL
Match: M5Y006_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010437mg PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.4e-102
Identity = 183/248 (73.79%), Postives = 207/248 (83.47%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  Q+  N  RALEG+HGV VVP S F  +ETT+DG      CGSSA+  NQ L MQ VW
Sbjct: 1   MSPQSTLNPSRALEGMHGVRVVPYSLFESEETTQDGDLPHSTCGSSAVGANQQLFMQRVW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP CL+P+ GCIQGD ++ E VANVLTSLPFI LGI APRKN + K+YANSLIGVGVA
Sbjct: 61  QQRPPCLKPIQGCIQGDHSVVETVANVLTSLPFIVLGIHAPRKNLNSKIYANSLIGVGVA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           SSLYHSSRGKLRQYLRWADYTMIATATVCL+ ALRN+NPKLLMAASA  LP++P  VSA+
Sbjct: 121 SSLYHSSRGKLRQYLRWADYTMIATATVCLSRALRNENPKLLMAASALFLPIQPLMVSAV 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTG+MEV FAKRALKDP+LR AHNVHKMS+++GGVLFIADD  P+TPF+HAAWHLAAAVG
Sbjct: 181 HTGIMEVAFAKRALKDPELRTAHNVHKMSSLVGGVLFIADDMFPQTPFLHAAWHLAAAVG 240

Query: 250 VGTCNKLL 258
           V TCNKLL
Sbjct: 241 VSTCNKLL 248

[Close]

BLAST of CmoCh04G022240 vs. TrEMBL
Match: B9HW55_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12140g PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-102
Identity = 183/248 (73.79%), Postives = 207/248 (83.47%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  Q+  N  + LEG+HG+ VVP S FAL E  + G F Q  C SS   +NQ L+MQ VW
Sbjct: 1   MSHQSTFNPSKTLEGVHGIHVVPHSPFALKEINQQGDFPQSTCESSGNGLNQLLLMQRVW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP CLRP+ GCI GD++LAE VANV+TSLPFIALGIQAPRKN + KLYANSLIGVGVA
Sbjct: 61  QQRPGCLRPIQGCIHGDQHLAETVANVITSLPFIALGIQAPRKNLNTKLYANSLIGVGVA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           SSLYHSSRGKLR+YLRW DYTMIATATVCL+ ALRN+NPK LMAASA LLP++P  VSA+
Sbjct: 121 SSLYHSSRGKLRKYLRWFDYTMIATATVCLSRALRNENPKFLMAASAALLPIQPLMVSAI 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTGMMEV FAKRALKDPDLRMAHN+HKMS++LGGVLFIADD  P TPF+HA WHLAAA+G
Sbjct: 181 HTGMMEVAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDCFPSTPFLHAGWHLAAAIG 240

Query: 250 VGTCNKLL 258
           VGTCNKLL
Sbjct: 241 VGTCNKLL 248

[Close]

BLAST of CmoCh04G022240 vs. TrEMBL
Match: B9SJ64_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0843790 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.4e-102
Identity = 181/257 (70.43%), Postives = 211/257 (82.10%), Query Frame = 1


Query: 1   MIQLITETLMGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVN 60
           ++  I   +M  Q+ +N  +ALEG+HG+ VVP S FAL+E T  G FSQ  CG+     N
Sbjct: 5   LLATILIDIMNRQSTTNPSKALEGVHGIHVVPHSPFALEEITHQGDFSQSTCGNLVNRAN 64

Query: 61  QPLIMQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYA 120
           Q L++Q  WEQRP CLRP+  CI GD++LAE VANVLTSLPFIALG+QAPRKN + K+YA
Sbjct: 65  QQLLLQRAWEQRPGCLRPIRCCINGDKHLAETVANVLTSLPFIALGLQAPRKNLTTKMYA 124

Query: 121 NSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLP 180
           NSLIGVGVASSLYHSSRG++R+YLRW DYTMIAT TVCL+ ALRN+NPKLLMAASA LLP
Sbjct: 125 NSLIGVGVASSLYHSSRGRIRKYLRWLDYTMIATTTVCLSRALRNENPKLLMAASAALLP 184

Query: 181 LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHA 240
           ++P  VS +HTGMMEV FAKRALKDPDLRMAHN+HKMS++LGGVLFIADD  P TPFIHA
Sbjct: 185 IKPLMVSVVHTGMMEVAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDLFPSTPFIHA 244

Query: 241 AWHLAAAVGVGTCNKLL 258
            WH+AAAVGVGTCNKLL
Sbjct: 245 GWHIAAAVGVGTCNKLL 261

[Close]

BLAST of CmoCh04G022240 vs. TAIR10
Match: AT1G23110.1 (AT1G23110.1 unknown protein)

HSP 1 Score: 340.9 bits (873), Expect = 8.3e-94
Identity = 164/248 (66.13%), Postives = 197/248 (79.44%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  QN S S  ALEG+HGV V   S F+ ++TT+   F Q N  SS +  NQ L ++  W
Sbjct: 1   MSLQNVSKSSNALEGIHGVHVTSHSPFSFEKTTQVSDF-QTNTKSSVMESNQRLSIERFW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP CLRP+   I+GD+++ E  ANV TSLPFI LG+QAPRKN + K+YANSLIGVG+A
Sbjct: 61  QQRPPCLRPICCSIRGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVGIA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           SSLYH+SRGKLR+YLRW DYTMIAT T+CL+ ALRN+NPK LMAASA +LP +P  VSA+
Sbjct: 121 SSLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVSAV 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTGMMEV FAKR+LKDPDL+ AHNVHKMS++LGG LFIADD  P+TPF+HA WHLAAA+G
Sbjct: 181 HTGMMEVAFAKRSLKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAAIG 240

Query: 250 VGTCNKLL 258
           VGTCNKLL
Sbjct: 241 VGTCNKLL 247

[Close]

BLAST of CmoCh04G022240 vs. TAIR10
Match: AT1G70900.1 (AT1G70900.1 unknown protein)

HSP 1 Score: 337.4 bits (864), Expect = 9.2e-93
Identity = 161/248 (64.92%), Postives = 195/248 (78.63%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  Q+ S + ++LEG+HGV VV  SHF  +   +   F   + G+      Q L ++ VW
Sbjct: 1   MSPQSVSKTSKSLEGVHGVHVVSHSHFGFESIGQVSGFESADAGTK-----QRLFIERVW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP CLRP+   I GD+++ E  ANV+TS+PFI LG+QAPRKN +MK+YANSLIGVG+A
Sbjct: 61  QQRPPCLRPIHCSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGIA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           SSLYHSSRGK R+YLRWADYTMIATAT+CLT ALR +NPK LMAASA  LP +P  VSA+
Sbjct: 121 SSLYHSSRGKFRKYLRWADYTMIATATICLTRALREENPKFLMAASALALPFQPLVVSAV 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTGMMEV FAKRAL+DPDL+MAH+VHKMS++LGG LFIADD  P+TPFIHA WHLAAA+G
Sbjct: 181 HTGMMEVAFAKRALEDPDLKMAHDVHKMSSLLGGALFIADDLFPETPFIHAGWHLAAAIG 240

Query: 250 VGTCNKLL 258
           VGTCNKLL
Sbjct: 241 VGTCNKLL 243

[Close]

BLAST of CmoCh04G022240 vs. NCBI nr
Match: gi|659072858|ref|XP_008467131.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504559 [Cucumis melo])

HSP 1 Score: 476.5 bits (1225), Expect = 3.6e-131
Identity = 230/257 (89.49%), Postives = 246/257 (95.72%), Query Frame = 1


Query: 1   MIQLITETLMGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVN 60
           MIQLITETLMG QNKSNS RALEGLHGVT+V +S FA+++TT+DG+FSQ +CG+SA+SVN
Sbjct: 1   MIQLITETLMGIQNKSNSSRALEGLHGVTIVAESQFAVEKTTQDGEFSQSSCGNSAISVN 60

Query: 61  QPLIMQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYA 120
           QP + QWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPR+NFSMKLYA
Sbjct: 61  QPFLKQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRRNFSMKLYA 120

Query: 121 NSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLP 180
           NSLIGVGVASSLYHSSRGK+RQYLRWADYTMIA ATVCLTGAL+NDNPKLLMAASA LLP
Sbjct: 121 NSLIGVGVASSLYHSSRGKVRQYLRWADYTMIAAATVCLTGALKNDNPKLLMAASALLLP 180

Query: 181 LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHA 240
           LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMST+LGG  FIADDALP+TPFIHA
Sbjct: 181 LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTLLGGXFFIADDALPQTPFIHA 240

Query: 241 AWHLAAAVGVGTCNKLL 258
           AWHLAAAVGVGTCNKLL
Sbjct: 241 AWHLAAAVGVGTCNKLL 257

[Close]

BLAST of CmoCh04G022240 vs. NCBI nr
Match: gi|449465761|ref|XP_004150596.1| (PREDICTED: uncharacterized protein LOC101204891 [Cucumis sativus])

HSP 1 Score: 473.0 bits (1216), Expect = 4.0e-130
Identity = 227/257 (88.33%), Postives = 245/257 (95.33%), Query Frame = 1


Query: 1   MIQLITETLMGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVN 60
           MIQLITETLMG QNKSNS RALEGLHGVT+V +S F +++TT+DG+FSQ +CG+S +SVN
Sbjct: 1   MIQLITETLMGIQNKSNSSRALEGLHGVTIVAESQFTVEKTTQDGEFSQSSCGNSVISVN 60

Query: 61  QPLIMQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYA 120
           Q L+ QWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALG+QAPR+NFSMKLYA
Sbjct: 61  QSLLKQWVWEQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGVQAPRRNFSMKLYA 120

Query: 121 NSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLP 180
           NSLIGVGVASSLYHSSRGK+RQYLRWADYTMIA ATVCLTGAL+NDNPKLLMAASA LLP
Sbjct: 121 NSLIGVGVASSLYHSSRGKVRQYLRWADYTMIAAATVCLTGALKNDNPKLLMAASALLLP 180

Query: 181 LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHA 240
           LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMST+LGGVLF+ADD LP+TPFIHA
Sbjct: 181 LRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTLLGGVLFVADDVLPQTPFIHA 240

Query: 241 AWHLAAAVGVGTCNKLL 258
           AWHLAAAVGVGTCNKLL
Sbjct: 241 AWHLAAAVGVGTCNKLL 257

[Close]

BLAST of CmoCh04G022240 vs. NCBI nr
Match: gi|225424250|ref|XP_002284485.1| (PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera])

HSP 1 Score: 383.3 bits (983), Expect = 4.2e-103
Identity = 185/248 (74.60%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  Q+KSN  RAL+G+HGV VVP S FAL+E T+ G F +  C  S++  NQ L+MQ VW
Sbjct: 1   MSHQSKSNPSRALDGVHGVRVVPHSPFALEEITKPGDFDRSTCERSSIEANQRLLMQ-VW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP+CLRPV  C+ GD +L E VANVLTSLPFIALGIQAPRKN + KLYANSLIGVG+A
Sbjct: 61  QQRPACLRPVRCCLNGDESLGETVANVLTSLPFIALGIQAPRKNLNCKLYANSLIGVGIA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           S LYHSSRGKLR+YLRWADYTMIATATVCL+ A+RN+NPKLLMAASAF LP++P  VSA+
Sbjct: 121 SGLYHSSRGKLRKYLRWADYTMIATATVCLSRAIRNENPKLLMAASAFFLPIQPLMVSAV 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTGMMEV FAKRAL DPDLRM HNVHKMS++LGG LFIADD  P+TPFIHAAWHLAAAVG
Sbjct: 181 HTGMMEVAFAKRALDDPDLRMVHNVHKMSSLLGGALFIADDVFPRTPFIHAAWHLAAAVG 240

Query: 250 VGTCNKLL 258
           VGTCNKLL
Sbjct: 241 VGTCNKLL 247

[Close]

BLAST of CmoCh04G022240 vs. NCBI nr
Match: gi|596203192|ref|XP_007223731.1| (hypothetical protein PRUPE_ppa010437mg [Prunus persica])

HSP 1 Score: 380.9 bits (977), Expect = 2.1e-102
Identity = 183/248 (73.79%), Postives = 207/248 (83.47%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  Q+  N  RALEG+HGV VVP S F  +ETT+DG      CGSSA+  NQ L MQ VW
Sbjct: 1   MSPQSTLNPSRALEGMHGVRVVPYSLFESEETTQDGDLPHSTCGSSAVGANQQLFMQRVW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP CL+P+ GCIQGD ++ E VANVLTSLPFI LGI APRKN + K+YANSLIGVGVA
Sbjct: 61  QQRPPCLKPIQGCIQGDHSVVETVANVLTSLPFIVLGIHAPRKNLNSKIYANSLIGVGVA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           SSLYHSSRGKLRQYLRWADYTMIATATVCL+ ALRN+NPKLLMAASA  LP++P  VSA+
Sbjct: 121 SSLYHSSRGKLRQYLRWADYTMIATATVCLSRALRNENPKLLMAASALFLPIQPLMVSAV 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTG+MEV FAKRALKDP+LR AHNVHKMS+++GGVLFIADD  P+TPF+HAAWHLAAAVG
Sbjct: 181 HTGIMEVAFAKRALKDPELRTAHNVHKMSSLVGGVLFIADDMFPQTPFLHAAWHLAAAVG 240

Query: 250 VGTCNKLL 258
           V TCNKLL
Sbjct: 241 VSTCNKLL 248

[Close]

BLAST of CmoCh04G022240 vs. NCBI nr
Match: gi|645276626|ref|XP_008243376.1| (PREDICTED: uncharacterized protein LOC103341607 [Prunus mume])

HSP 1 Score: 380.6 bits (976), Expect = 2.7e-102
Identity = 182/248 (73.39%), Postives = 207/248 (83.47%), Query Frame = 1


Query: 10  MGTQNKSNSCRALEGLHGVTVVPDSHFALDETTRDGKFSQLNCGSSALSVNQPLIMQWVW 69
           M  Q+  N  RALEG+HGV VVP S F  +E T+DG      CGSSA+  NQ L MQ VW
Sbjct: 1   MSPQSTLNPSRALEGMHGVRVVPRSLFESEEITQDGDLPHSTCGSSAVGANQQLFMQRVW 60

Query: 70  EQRPSCLRPVGGCIQGDRNLAERVANVLTSLPFIALGIQAPRKNFSMKLYANSLIGVGVA 129
           +QRP CL+P+ GCIQGD ++ E VANVLTSLPFI LGIQAPRKN + K+YANSLIGVGVA
Sbjct: 61  QQRPPCLKPIQGCIQGDHSVVETVANVLTSLPFIVLGIQAPRKNLNSKIYANSLIGVGVA 120

Query: 130 SSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPKLLMAASAFLLPLRPFTVSAL 189
           SSLYHSSRGKLRQYLRWADYTMIATATVCL+ ALRN+NPKLLMAASA  LP++P  VSA+
Sbjct: 121 SSLYHSSRGKLRQYLRWADYTMIATATVCLSRALRNENPKLLMAASALFLPIQPLMVSAV 180

Query: 190 HTGMMEVIFAKRALKDPDLRMAHNVHKMSTILGGVLFIADDALPKTPFIHAAWHLAAAVG 249
           HTG+MEV FAKRALKDP+LR AHNVHKMS+++GGVLF+ADD  P+TPF+HAAWHLAAAVG
Sbjct: 181 HTGIMEVAFAKRALKDPELRTAHNVHKMSSLVGGVLFVADDMFPQTPFLHAAWHLAAAVG 240

Query: 250 VGTCNKLL 258
           V TCNKLL
Sbjct: 241 VSTCNKLL 248

The following BLAST results are available for this feature:

BLAST of CmoCh04G022240 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G022240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPJ5_CUCSA	2.8e-130	88.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570380 PE=4 SV=1	[more]
A5BL15_VITVI	2.9e-103	74.60	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05030 PE=4 SV=...	[more]
M5Y006_PRUPE	1.4e-102	73.79	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010437mg PE=4 SV=1	[more]
B9HW55_POPTR	1.9e-102	73.79	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12140g PE=4 SV=1	[more]
B9SJ64_RICCO	2.4e-102	70.43	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0843790 PE=4 SV=1	[more]

BLAST of CmoCh04G022240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23110.1	8.3e-94	66.13	unknown protein	[more]
AT1G70900.1	9.2e-93	64.92	unknown protein	[more]

BLAST of CmoCh04G022240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072858\|ref\|XP_008467131.1\|	3.6e-131	89.49	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504559 [Cucumis me...	[more]
gi\|449465761\|ref\|XP_004150596.1\|	4.0e-130	88.33	PREDICTED: uncharacterized protein LOC101204891 [Cucumis sativus]	[more]
gi\|225424250\|ref\|XP_002284485.1\|	4.2e-103	74.60	PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera]	[more]
gi\|596203192\|ref\|XP_007223731.1\|	2.1e-102	73.79	hypothetical protein PRUPE_ppa010437mg [Prunus persica]	[more]
gi\|645276626\|ref\|XP_008243376.1\|	2.7e-102	73.39	PREDICTED: uncharacterized protein LOC103341607 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G022240.1	CmoCh04G022240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35100	FAMILY NOT NAMED	coord: 10..268 score: 4.5E
None	No IPR available	PANTHER	PTHR35100:SF1	F15H11.13 PROTEIN	coord: 10..268 score: 4.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G022240	Cucsa.280340	Cucumber (Gy14) v1	cgycmoB0775
CmoCh04G022240	CmaCh15G009580	Cucurbita maxima (Rimu)	cmacmoB310
CmoCh04G022240	CmaCh04G021270	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G022240	Cla003928	Watermelon (97103) v1	cmowmB710
CmoCh04G022240	Csa5G570380	Cucumber (Chinese Long) v2	cmocuB723
CmoCh04G022240	MELO3C005303	Melon (DHL92) v3.5.1	cmomeB614
CmoCh04G022240	ClCG01G006270	Watermelon (Charleston Gray)	cmowcgB640
CmoCh04G022240	CSPI05G19550	Wild cucumber (PI 183967)	cmocpiB730
CmoCh04G022240	Lsi09G006620	Bottle gourd (USVL1VR-Ls)	cmolsiB615
CmoCh04G022240	Cp4.1LG13g03720	Cucurbita pepo (Zucchini)	cmocpeB658
CmoCh04G022240	Cp4.1LG01g18470	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G022240	MELO3C005303.2	Melon (DHL92) v3.6.1	cmomedB703
CmoCh04G022240	CsaV3_5G028400	Cucumber (Chinese Long) v3	cmocucB0855
CmoCh04G022240	Cla97C01G006580	Watermelon (97103) v2	cmowmbB681
CmoCh04G022240	Bhi12G000785	Wax gourd	cmowgoB0829
CmoCh04G022240	CsGy5G019050	Cucumber (Gy14) v2	cgybcmoB633

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G022240	CmoCh15G009970	Cucurbita moschata (Rifu)	cmocmoB263

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G022240	Cucumber (Gy14) v2	cgybcmoB656
CmoCh04G022240	Melon (DHL92) v3.6.1	cmomedB709
CmoCh04G022240	Silver-seed gourd	carcmoB0252
CmoCh04G022240	Silver-seed gourd	carcmoB1189
CmoCh04G022240	Cucumber (Chinese Long) v3	cmocucB0878
CmoCh04G022240	Cucumber (Chinese Long) v3	cmocucB0879
CmoCh04G022240	Watermelon (97103) v2	cmowmbB676
CmoCh04G022240	Watermelon (97103) v2	cmowmbB753
CmoCh04G022240	Wax gourd	cmowgoB0823
CmoCh04G022240	Cucurbita moschata (Rifu)	cmocmoB471
CmoCh04G022240	Cucumber (Gy14) v1	cgycmoB0545
CmoCh04G022240	Cucumber (Gy14) v1	cgycmoB0777
CmoCh04G022240	Wild cucumber (PI 183967)	cmocpiB752
CmoCh04G022240	Cucumber (Chinese Long) v2	cmocuB743
CmoCh04G022240	Melon (DHL92) v3.5.1	cmomeB621
CmoCh04G022240	Melon (DHL92) v3.5.1	cmomeB627
CmoCh04G022240	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G022240	Watermelon (97103) v1	cmowmB706
CmoCh04G022240	Bottle gourd (USVL1VR-Ls)	cmolsiB610