CmaCh15G009430 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCACCCAAACACTGCCATCGCCGCCGTGCTCCTGCCCTTCATCCTCGCTGTCCTCCCGCTGCCGACAAGGACCGAAGACACCTGCCCATATCCCTGCTACCCTCCGCCCACCGGCCCCGCCACCGCTACTCCCACCACTCCATCTCCGCCATCGCAAACAGGCTATGGCTCCTATTCTCCTCCGGCCTTCTACCCTCCTCCGGCTGCTACCTACCCATATAACACCCCGCCCTCCAACGGCAACAGCTTCGATGGCGTCACTCCACCGCCTCCGGACCCGATTCTGCCGTACTTCCCTTATTACTTCAAGAAGCCTCCTCATAAACCGGACGATGAATCCAGTGGCTCCGCCATCGCAGGACGCAAATCGGAGGTCGGAATGATCGCTGGAACTTTGTTATTTATTACTCTCTCTCTCTCTCTCTCTCTCTTTCCTTCAATTTGA ATGGCTTCCCACCCAAACACTGCCATCGCCGCCGTGCTCCTGCCCTTCATCCTCGCTGTCCTCCCGCTGCCGACAAGGACCGAAGACACCTGCCCATATCCCTGCTACCCTCCGCCCACCGGCCCCGCCACCGCTACTCCCACCACTCCATCTCCGCCATCGCAAACAGGCTATGGCTCCTATTCTCCTCCGGCCTTCTACCCTCCTCCGGCTGCTACCTACCCATATAACACCCCGCCCTCCAACGGCAACAGCTTCGATGGCGTCACTCCACCGCCTCCGGACCCGATTCTGCCGTACTTCCCTTATTACTTCAAGAAGCCTCCTCATAAACCGGACGATGAATCCAGTGGCTCCGCCATCGCAGGACGCAAATCGGAGGTCGGAATGATCGCTGGAACTTTGTTATTTATTACTCTCTCTCTCTCTCTCTCTCTCTTTCCTTCAATTTGA ATGGCTTCCCACCCAAACACTGCCATCGCCGCCGTGCTCCTGCCCTTCATCCTCGCTGTCCTCCCGCTGCCGACAAGGACCGAAGACACCTGCCCATATCCCTGCTACCCTCCGCCCACCGGCCCCGCCACCGCTACTCCCACCACTCCATCTCCGCCATCGCAAACAGGCTATGGCTCCTATTCTCCTCCGGCCTTCTACCCTCCTCCGGCTGCTACCTACCCATATAACACCCCGCCCTCCAACGGCAACAGCTTCGATGGCGTCACTCCACCGCCTCCGGACCCGATTCTGCCGTACTTCCCTTATTACTTCAAGAAGCCTCCTCATAAACCGGACGATGAATCCAGTGGCTCCGCCATCGCAGGACGCAAATCGGAGGTCGGAATGATCGCTGGAACTTTGTTATTTATTACTCTCTCTCTCTCTCTCTCTCTCTTTCCTTCAATTTGA MASHPNTAIAAVLLPFILAVLPLPTRTEDTCPYPCYPPPTGPATATPTTPSPPSQTGYGSYSPPAFYPPPAATYPYNTPPSNGNSFDGVTPPPPDPILPYFPYYFKKPPHKPDDESSGSAIAGRKSEVGMIAGTLLFITLSLSLSLFPSI
BLAST of CmaCh15G009430 vs. TrEMBL
Match: A0A0A0KUZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576580 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.6e-53 Identity = 107/142 (75.35%), Postives = 119/142 (83.80%), Query Frame = 1
BLAST of CmaCh15G009430 vs. TrEMBL
Match: V7CHY2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G093200g PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 7.1e-23 Identity = 74/157 (47.13%), Postives = 94/157 (59.87%), Query Frame = 1
BLAST of CmaCh15G009430 vs. TrEMBL
Match: A0A067KPH5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04690 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.8e-18 Identity = 74/141 (52.48%), Postives = 90/141 (63.83%), Query Frame = 1
BLAST of CmaCh15G009430 vs. TrEMBL
Match: V4UGT7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017051mg PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.8e-18 Identity = 67/154 (43.51%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of CmaCh15G009430 vs. TrEMBL
Match: B9HW72_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0010s12350g PE=4 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 4.0e-18 Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh15G009430 vs. TAIR10
Match: AT1G23050.1 (AT1G23050.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 77.8 bits (190), Expect = 6.3e-15 Identity = 64/151 (42.38%), Postives = 82/151 (54.30%), Query Frame = 1
BLAST of CmaCh15G009430 vs. TAIR10
Match: AT1G70985.1 (AT1G70985.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11 Identity = 52/138 (37.68%), Postives = 70/138 (50.72%), Query Frame = 1
BLAST of CmaCh15G009430 vs. TAIR10
Match: AT5G49280.1 (AT5G49280.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 59.7 bits (143), Expect = 1.8e-09 Identity = 42/93 (45.16%), Postives = 51/93 (54.84%), Query Frame = 1
BLAST of CmaCh15G009430 vs. NCBI nr
Match: gi|659072902|ref|XP_008467157.1| (PREDICTED: extensin [Cucumis melo]) HSP 1 Score: 218.0 bits (554), Expect = 1.1e-53 Identity = 107/134 (79.85%), Postives = 118/134 (88.06%), Query Frame = 1
BLAST of CmaCh15G009430 vs. NCBI nr
Match: gi|778704056|ref|XP_011655467.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]) HSP 1 Score: 214.9 bits (546), Expect = 9.4e-53 Identity = 107/142 (75.35%), Postives = 119/142 (83.80%), Query Frame = 1
BLAST of CmaCh15G009430 vs. NCBI nr
Match: gi|593789372|ref|XP_007157725.1| (hypothetical protein PHAVU_002G093200g [Phaseolus vulgaris]) HSP 1 Score: 115.2 bits (287), Expect = 1.0e-22 Identity = 74/157 (47.13%), Postives = 94/157 (59.87%), Query Frame = 1
BLAST of CmaCh15G009430 vs. NCBI nr
Match: gi|1012112380|ref|XP_015960308.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Arachis duranensis]) HSP 1 Score: 109.0 bits (271), Expect = 7.3e-21 Identity = 66/125 (52.80%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of CmaCh15G009430 vs. NCBI nr
Match: gi|1021506389|ref|XP_016196587.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Arachis ipaensis]) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20 Identity = 68/137 (49.64%), Postives = 79/137 (57.66%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |