CmaCh14G020190 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G020190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	LIM domain-containing family protein
Location	Cma_Chr14 : 14115674 .. 14117188 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCAGACAACTTGCAATTTTTTTTTTTTTTTTTTTGCAGTTTCTCGAGGAGCTATCGCTCGAATCGTTGTCGTAGACGAAAAATCGAGAAGGAATAAAGATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGACAAGACTGTTTATGTGGTTGAGTTGCTTTCTCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCCGTATGTCTCGATTTACACTTTTCGTTCTTTTGTTCGTTTGATATGATCAATCTTTGACCCAAATCGTCTTTCACGACAGATGAGTAGTTACTCATGGATGGATGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCGGGAAATTTCAGCAAGAATTTTCAAACTTGTAATGTTTTTTCTTTTCCATCTCTTATCATTTTACCTATTTTTCTATCATTCTCATTCTCATTATATTTTTGGCAACAGCCAAGCCTTCCGAGAAGCAAAATGATATGGTATGTTCCCATTCTGGACCGTTCCATAACGATTTGAAACATGATATATTATAGTACTATCAAGAATCGTTATTTCTCAAGATCACTCCCGAACATGCTTGAAAGCACGAGATGTCTTCTATAATTCATGTTTTAGTTTACCATCAAATGCAATTCGGATATTAATTACGTAGCTCGGTAACTTTCAAAATGTGTAGCAATCGAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTCTATAGTTCTTCATTTGGTTTTGTTTTGTTTTGTTAAATTATAGGTAGAATGTTAGTAGATTTGTTGGATAATTAAAAGTATGGTTCAGGTGACTCTTGAGGGGGAATGTTACCATAAGACTTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCGGAGGAAGATGAGGCCAAGGGCAACGCCGAAGCTCAGTCCGAGGAAGGGGCTGTAGAAACTTAAAATGCCTTCATTCTGCTTCCATTCACCAGAGTTTGGGAGTCCTTGGCTTTCTTATTTTTTTGTTGTTGTTTGAGCTATTTTTTCTCTCTTTTGCTTCCAAAGTTGATTTGTAACCAATTTGGGTTTGTTTTAAGGCAATTCAACACATTATTTCTATGCCCCATTGGAGCATGGAAACACAATGTGCCATAGTTTCTTTCGGTGAGAGGAGAAGCTGGAATAAAGCACACTGAATGCTATATATCATTTCCAATCACTATTTGTCCCAAATATGTGCTCTCTTTCTCGTTTTCGGTTTTTATTTCAAACTACTGTTCTAAATCGTTACTAATATTTTG

mRNA sequence

CCTCAGACAACTTGCAATTTTTTTTTTTTTTTTTTTGCAGTTTCTCGAGGAGCTATCGCTCGAATCGTTGTCGTAGACGAAAAATCGAGAAGGAATAAAGATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGACAAGACTGTTTATGTGGTTGAGTTGCTTTCTCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCCATGAGTAGTTACTCATGGATGGATGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCGGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCCGAGAAGCAAAATGATATGCAATCGAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGACTTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCGGAGGAAGATGAGGCCAAGGGCAACGCCGAAGCTCAGTCCGAGGAAGGGGCTGTAGAAACTTAAAATGCCTTCATTCTGCTTCCATTCACCAGAGTTTGGGAGTCCTTGGCTTTCTTATTTTTTTGTTGTTGTTTGAGCTATTTTTTCTCTCTTTTGCTTCCAAAGTTGATTTGTAACCAATTTGGGTTTGTTTTAAGGCAATTCAACACATTATTTCTATGCCCCATTGGAGCATGGAAACACAATGTGCCATAGTTTCTTTCGGTGAGAGGAGAAGCTGGAATAAAGCACACTGAATGCTATATATCATTTCCAATCACTATTTGTCCCAAATATGTGCTCTCTTTCTCGTTTTCGGTTTTTATTTCAAACTACTGTTCTAAATCGTTACTAATATTTTG

Coding sequence (CDS)

ATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGACAAGACTGTTTATGTGGTTGAGTTGCTTTCTCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCCATGAGTAGTTACTCATGGATGGATGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCGGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCCGAGAAGCAAAATGATATGCAATCGAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGACTTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCGGAGGAAGATGAGGCCAAGGGCAACGCCGAAGCTCAGTCCGAGGAAGGGGCTGTAGAAACTTAA

Protein sequence

MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKATTPPPESAEEDEAKGNAEAQSEEGAVET

Homology

[Close]

BLAST of CmaCh14G020190 vs. Swiss-Prot
Match: PLI2C_ARATH (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.0e-81
Identity = 148/209 (70.81%), Postives = 172/209 (82.30%), Query Frame = 1


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQT+  +EK ND  ++AP++LSS FSGTQDKC+AC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDA-TKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHKTCFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 TTPPPESAE--EDEAKGNAEAQSEEGAVE 209
           +T   +  E  EDEA    E  S+  A E
Sbjct: 183 STAEEDKTEPKEDEANPTEEETSDAAAEE 210

[Close]

BLAST of CmaCh14G020190 vs. Swiss-Prot
Match: PLI2A_ARATH (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 5.1e-81
Identity = 147/214 (68.69%), Postives = 172/214 (80.37%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKC+ C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHKTCFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------ATTPPPESAEEDEAKGNAEAQSEEGAVE 209
                   +PP +  + D+     EA+ ++ A E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

[Close]

BLAST of CmaCh14G020190 vs. Swiss-Prot
Match: PLI2B_ARATH (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 7.4e-80
Identity = 144/212 (67.92%), Postives = 168/212 (79.25%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKC+AC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HKTCFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 ---ATTPPPESAEEDEAKGNAEAQSEEGAVET 210
                T PPE  E+       EA+ E G  E+
Sbjct: 181 TASGNTLPPEPTEDVA----VEAKEENGVSES 205

[Close]

BLAST of CmaCh14G020190 vs. Swiss-Prot
Match: WLI2A_ARATH (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71
Identity = 122/191 (63.87%), Postives = 160/191 (83.77%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP-SEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP ++K     +R PS+L+ MFSGTQDKC+ C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKATTPPPESA 190
           K+AT     +A
Sbjct: 181 KRATAAATAAA 191

[Close]

BLAST of CmaCh14G020190 vs. Swiss-Prot
Match: WLI2B_ARATH (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.4e-70
Identity = 118/182 (64.84%), Postives = 154/182 (84.62%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K     +R PS+++  FSGTQ+KC+ CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANK 180
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 KA 182
           ++
Sbjct: 181 RS 182

[Close]

BLAST of CmaCh14G020190 vs. TrEMBL
Match: A0A0A0L4A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.0e-104
Identity = 186/208 (89.42%), Postives = 194/208 (93.27%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+ SRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVE 209
           A TPPPE AEE+E    A+ Q++E  VE
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVE 207

[Close]

BLAST of CmaCh14G020190 vs. TrEMBL
Match: A0A0A0L6A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.7e-94
Identity = 171/208 (82.21%), Postives = 185/208 (88.94%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQT K S+K ND+ +R PSKLSSMFSGTQDKCS C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQT-KSSDKPNDL-TRTPSKLSSMFSGTQDKCSVCTKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           +LEGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK
Sbjct: 121 SLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVE 209
            TTPP +  +ED        +S E AVE
Sbjct: 181 TTTPPADHTDED---AEPSPRSGEQAVE 203

[Close]

BLAST of CmaCh14G020190 vs. TrEMBL
Match: W9RX88_9ROSA (Pollen-specific protein SF3 OS=Morus notabilis GN=L484_006564 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.6e-92
Identity = 164/211 (77.73%), Postives = 181/211 (85.78%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKAC+KTVYVV+++SLEG PYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MAFTGTLDKCKACNKTVYVVDMMSLEGVPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT--------------------SKPSEKQNDMQSRAPSKLSSMF 120
           HFEQLFKESGNFSKNFQT                    +K SE+QND  +RAPSKLSS+F
Sbjct: 61  HFEQLFKESGNFSKNFQTVFLLGLFANNNKRVGEKFVTAKSSERQNDQLARAPSKLSSLF 120

Query: 121 SGTQDKCSACSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFA 180
           SGTQDKC+ CSKTVYPLEKV+LEGECYHK+CFRCAHGGC LTHSSYAALDGVLYCKHHF 
Sbjct: 121 SGTQDKCATCSKTVYPLEKVSLEGECYHKSCFRCAHGGCPLTHSSYAALDGVLYCKHHFQ 180

Query: 181 QLFMIKGNYNHVLEAAANKKATTPPPESAEE 192
           QLFM KGNY+HVL+AAANKK  TPPPE+A++
Sbjct: 181 QLFMEKGNYSHVLKAAANKKNATPPPETADQ 211

[Close]

BLAST of CmaCh14G020190 vs. TrEMBL
Match: A0A0L9U419_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g053500 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.7e-92
Identity = 162/204 (79.41%), Postives = 184/204 (90.20%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LL+LEG PYHK+CF+CSHCKG L+MS+YS MDGVLYCKP
Sbjct: 410 MSFTGTLDKCKACDKTVYVVDLLTLEGTPYHKNCFRCSHCKGYLTMSTYSSMDGVLYCKP 469

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQT++ SEKQN+M ++ P++LSSMFSGT DKCS CSKTVYPLEK+
Sbjct: 470 HFEQLFKESGNFSKNFQTARSSEKQNEM-NKTPNRLSSMFSGTLDKCSVCSKTVYPLEKM 529

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKTCFRCAH GC+LTHSSYA+LDGVLYC+HHF QLFM KGNY+HVL+AAAN+K
Sbjct: 530 TLEGECYHKTCFRCAHAGCHLTHSSYASLDGVLYCRHHFQQLFMEKGNYHHVLQAAANRK 589

Query: 181 ATTPPPESAEEDEAKGNAEAQSEE 205
             TPPPE AEE+E     EA+ EE
Sbjct: 590 NATPPPEPAEEEEPPKPEEAEQEE 612

[Close]

BLAST of CmaCh14G020190 vs. TrEMBL
Match: A0A0S3RSW7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G084900 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.7e-92
Identity = 162/204 (79.41%), Postives = 184/204 (90.20%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LL+LEG PYHK+CF+CSHCKG L+MS+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLTLEGTPYHKNCFRCSHCKGYLTMSTYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQT++ SEKQN+M ++ P++LSSMFSGT DKCS CSKTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQTARSSEKQNEM-NKTPNRLSSMFSGTLDKCSVCSKTVYPLEKM 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKTCFRCAH GC+LTHSSYA+LDGVLYC+HHF QLFM KGNY+HVL+AAAN+K
Sbjct: 121 TLEGECYHKTCFRCAHAGCHLTHSSYASLDGVLYCRHHFQQLFMEKGNYHHVLQAAANRK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEE 205
             TPPPE AEE+E     EA+ EE
Sbjct: 181 NATPPPEPAEEEEPPKPEEAEQEE 203

[Close]

BLAST of CmaCh14G020190 vs. TAIR10
Match: AT3G61230.1 (AT3G61230.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 304.3 bits (778), Expect = 5.8e-83
Identity = 148/209 (70.81%), Postives = 172/209 (82.30%), Query Frame = 1


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQT+  +EK ND  ++AP++LSS FSGTQDKC+AC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDA-TKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHKTCFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 TTPPPESAE--EDEAKGNAEAQSEEGAVE 209
           +T   +  E  EDEA    E  S+  A E
Sbjct: 183 STAEEDKTEPKEDEANPTEEETSDAAAEE 210

[Close]

BLAST of CmaCh14G020190 vs. TAIR10
Match: AT2G45800.1 (AT2G45800.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 302.0 bits (772), Expect = 2.9e-82
Identity = 147/214 (68.69%), Postives = 172/214 (80.37%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKC+ C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHKTCFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------ATTPPPESAEEDEAKGNAEAQSEEGAVE 209
                   +PP +  + D+     EA+ ++ A E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

[Close]

BLAST of CmaCh14G020190 vs. TAIR10
Match: AT1G01780.1 (AT1G01780.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 298.1 bits (762), Expect = 4.2e-81
Identity = 144/212 (67.92%), Postives = 168/212 (79.25%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKC+AC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HKTCFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 ---ATTPPPESAEEDEAKGNAEAQSEEGAVET 210
                T PPE  E+       EA+ E G  E+
Sbjct: 181 TASGNTLPPEPTEDVA----VEAKEENGVSES 205

[Close]

BLAST of CmaCh14G020190 vs. TAIR10
Match: AT2G39900.1 (AT2G39900.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 270.8 bits (691), Expect = 7.1e-73
Identity = 122/191 (63.87%), Postives = 160/191 (83.77%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP-SEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP ++K     +R PS+L+ MFSGTQDKC+ C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKATTPPPESA 190
           K+AT     +A
Sbjct: 181 KRATAAATAAA 191

[Close]

BLAST of CmaCh14G020190 vs. TAIR10
Match: AT3G55770.7 (AT3G55770.7 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-55
Identity = 108/216 (50.00%), Postives = 142/216 (65.74%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K     +R PS+++  FSGTQ+KC+ CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 V---------TLEGECYHKTCFRCAHGGCN-------------------------LTHSS 180
           +           +    H+       G C                          ++ S+
Sbjct: 121 IHNPLSYRELARKPNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGCPISPSN 180

Query: 181 YAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 182
           YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K++
Sbjct: 181 YAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS 216

[Close]

BLAST of CmaCh14G020190 vs. NCBI nr
Match: gi|659075311|ref|XP_008438077.1| (PREDICTED: pollen-specific protein SF3-like isoform X1 [Cucumis melo])

HSP 1 Score: 394.4 bits (1012), Expect = 1.2e-106
Identity = 187/209 (89.47%), Postives = 197/209 (94.26%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+QSRAPSKLSSMFSGTQDKC+AC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVET 210
           ATTPPPE AEE+E    A+ Q++E   +T
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEAVEQT 209

[Close]

BLAST of CmaCh14G020190 vs. NCBI nr
Match: gi|778677275|ref|XP_004134333.2| (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 6.0e-106
Identity = 187/208 (89.90%), Postives = 195/208 (93.75%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+QSRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVE 209
           A TPPPE AEE+E    A+ Q++E  VE
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVE 208

[Close]

BLAST of CmaCh14G020190 vs. NCBI nr
Match: gi|659075313|ref|XP_008438078.1| (PREDICTED: pollen-specific protein SF3-like isoform X2 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 8.7e-105
Identity = 186/209 (89.00%), Postives = 196/209 (93.78%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+ SRAPSKLSSMFSGTQDKC+AC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVET 210
           ATTPPPE AEE+E    A+ Q++E   +T
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEAVEQT 208

[Close]

BLAST of CmaCh14G020190 vs. NCBI nr
Match: gi|778677278|ref|XP_011650764.1| (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X2 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 4.3e-104
Identity = 186/208 (89.42%), Postives = 194/208 (93.27%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+ SRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVE 209
           A TPPPE AEE+E    A+ Q++E  VE
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVE 207

[Close]

BLAST of CmaCh14G020190 vs. NCBI nr
Match: gi|659075295|ref|XP_008438068.1| (PREDICTED: pollen-specific protein SF3-like [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 7.4e-96
Identity = 174/208 (83.65%), Postives = 186/208 (89.42%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQT KPSE+QND+ +R PSKLSSMF GTQDKCS C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQT-KPSERQNDL-TRTPSKLSSMFCGTQDKCSVCTKTVYPLEKV 120

Query: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVE 209
            TTPP E  +ED        +S E AVE
Sbjct: 181 TTTPPAEHTDED---AEPSPRSGEQAVE 203

The following BLAST results are available for this feature:

BLAST of CmaCh14G020190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLI2C_ARATH	1.0e-81	70.81	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana GN=PLIM2C PE=1 SV=1	[more]
PLI2A_ARATH	5.1e-81	68.69	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1	[more]
PLI2B_ARATH	7.4e-80	67.92	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana GN=PLIM2B PE=1 SV=1	[more]
WLI2A_ARATH	1.3e-71	63.87	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana GN=WLIN2A PE=1 SV=1	[more]
WLI2B_ARATH	2.4e-70	64.84	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana GN=WLIM2B PE=1 SV=1	[more]

BLAST of CmaCh14G020190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4A1_CUCSA	3.0e-104	89.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122620 PE=4 SV=1	[more]
A0A0A0L6A8_CUCSA	3.7e-94	82.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122580 PE=4 SV=1	[more]
W9RX88_9ROSA	2.6e-92	77.73	Pollen-specific protein SF3 OS=Morus notabilis GN=L484_006564 PE=4 SV=1	[more]
A0A0L9U419_PHAAN	7.7e-92	79.41	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g053500 PE=4 SV=1	[more]
A0A0S3RSW7_PHAAN	7.7e-92	79.41	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G084900 PE=...	[more]

BLAST of CmaCh14G020190 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61230.1	5.8e-83	70.81	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	2.9e-82	68.69	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	4.2e-81	67.92	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	7.1e-73	63.87	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.7	3.0e-55	50.00	GATA type zinc finger transcription factor family protein	[more]

BLAST of CmaCh14G020190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075311\|ref\|XP_008438077.1\|	1.2e-106	89.47	PREDICTED: pollen-specific protein SF3-like isoform X1 [Cucumis melo]	[more]
gi\|778677275\|ref\|XP_004134333.2\|	6.0e-106	89.90	PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus...	[more]
gi\|659075313\|ref\|XP_008438078.1\|	8.7e-105	89.00	PREDICTED: pollen-specific protein SF3-like isoform X2 [Cucumis melo]	[more]
gi\|778677278\|ref\|XP_011650764.1\|	4.3e-104	89.42	PREDICTED: LIM domain-containing protein PLIM2b-like isoform X2 [Cucumis sativus...	[more]
gi\|659075295\|ref\|XP_008438068.1\|	7.4e-96	83.65	PREDICTED: pollen-specific protein SF3-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001781	Znf_LIM

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G020190.1	CmaCh14G020190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	GENE3D	G3DSA:2.10.110.10		coord: 100..169 score: 2.4E-21coord: 4..71 score: 1.1
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 score: 2.1E-13coord: 107..162 score: 9.1
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 106..158 score: 1.2E-12coord: 9..61 score: 5.4
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44 scor
IPR001781	Zinc finger, LIM-type	PROFILE	PS50023	LIM_DOMAIN_2	coord: 105..165 score: 12.335coord: 8..68 score: 13
None	No IPR available	PANTHER	PTHR24206	FAMILY NOT NAMED	coord: 1..204 score: 2.4E
None	No IPR available	PANTHER	PTHR24206:SF22	PROTEIN PLIM2A	coord: 1..204 score: 2.4E
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 133..172 score: 4.13E-13coord: 36..76 score: 2.6E-15coord: 3..35 score: 1.17E-8coord: 99..132 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G020190	Cucsa.258170	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G020190	Lsi05G020180	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G020190	Cp4.1LG03g16840	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G020190	Cp4.1LG08g01620	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G020190	CsGy3G009080	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G020190	Carg14794	Silver-seed gourd	carcmaB0874

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G020190	Watermelon (97103) v2	cmawmbB263
CmaCh14G020190	Wax gourd	cmawgoB0332
CmaCh14G020190	Cucurbita maxima (Rimu)	cmacmaB253
CmaCh14G020190	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh14G020190	Cucurbita maxima (Rimu)	cmacmaB285
CmaCh14G020190	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G020190	Cucurbita moschata (Rifu)	cmacmoB255
CmaCh14G020190	Cucurbita moschata (Rifu)	cmacmoB260
CmaCh14G020190	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G020190	Wild cucumber (PI 183967)	cmacpiB253
CmaCh14G020190	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G020190	Cucumber (Chinese Long) v2	cmacuB250
CmaCh14G020190	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G020190	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G020190	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G020190	Watermelon (97103) v1	cmawmB242
CmaCh14G020190	Cucurbita pepo (Zucchini)	cmacpeB253
CmaCh14G020190	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G020190	Silver-seed gourd	carcmaB0918
CmaCh14G020190	Cucumber (Chinese Long) v3	cmacucB0291