Carg14794 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14794
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	LIM domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_079 : 17680 .. 19271 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTTTTCTCATCCATCCCATTTCACTTACCTTCTTTTCATAATCTTGTCTGAGATCTCATCCTCAGACAACTTGCAATCTTTTTTTTTTTTTTGTTTGCAGTTTCTCGAGGAGCTATCGTGTTTCGGTTCGAGTCGTTGTCGTAGACGAAAAATCGAGAAGGAATAAAGATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGAACCCTTTCCGTACGTCTCGATTTACACGTTTCGTTCTTCTTTTTTCGTTTCATATGATCAATCTTTGACCCGAGTTGTCTTTCACGACAGATGAGTAGCTACTCATGGATGGACGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTGTAATGTTTTTTCTTTTCCATCTCTTATCATTTTACCTATTTCTCTATCATTCTCTCATTCTCATTATATTTTTGGCAACAGCCAAGCCTTCCGAGAAGCAAAATGATATGGTATGTTCCCATTCTTGACCGATCCATAACGATTTGAAACGTGATATATTGCAGTACTGTCAAGAATCGTTATTTCTCAAGATCACTCCCGAACATACTTGAAAGCATGAGATATCTTCTTTAATTCATGTTTTAGTTTACTATCGAATGCAATTCCGATATTAATTACGTAGCTCGGTAACTTTCAAAATGTGTAGCAATCAAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGTATAGTTCTTCATTTGGTTTTGTTTTGTTTTGTTGAATTATAGGTAGAATGTTAGTAGATTTGTTGGATAATTAAAAGTATGGTTCAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCTGAGGAAGACGAGGCCAAGGGCGATGCCGAAGCTGAGGAAGGGGCTGTAGAAACTTAAAATGCCTTCATTCTGCTTCCATTCACCAGAGTTTGGGGGTCCTTGGCTTTCTTATTTTTTTTTTGTTGTTTTGTTGTTTGAGCTATTTTTTCTCTCTTTTTTGCTTTCAAAGTTGGTTTGTAACCAATTTGGGTTTGTTTTAAGGCAATTCAACACGTTATTTCTATGCCCCATTGGAGCATGGAAACACAATGTACCATAGTTTCTTTCGGTGAGAGGAGAAGCTGGAATAAAGCACACTGAATGCTATATCATTTCCAATCACTATGTGTCCCAAATATGTGCTCTCTTTCTCTTTTTCGATTTCTATTTCAAACTACTCTTCTAAATAGTTATTAATATTTT

mRNA sequence

TTCTCTTTTCTCATCCATCCCATTTCACTTACCTTCTTTTCATAATCTTGTCTGAGATCTCATCCTCAGACAACTTGCAATCTTTTTTTTTTTTTTGTTTGCAGTTTCTCGAGGAGCTATCGTGTTTCGGTTCGAGTCGTTGTCGTAGACGAAAAATCGAGAAGGAATAAAGATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGAACCCTTTCCATGAGTAGCTACTCATGGATGGACGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCCGAGAAGCAAAATGATATGCAATCAAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCTGAGGAAGACGAGGCCAAGGGCGATGCCGAAGCTGAGGAAGGGGCTGTAGAAACTTAAAATGCCTTCATTCTGCTTCCATTCACCAGAGTTTGGGGGTCCTTGGCTTTCTTATTTTTTTTTTGTTGTTTTGTTGTTTGAGCTATTTTTTCTCTCTTTTTTGCTTTCAAAGTTGGTTTGTAACCAATTTGGGTTTGTTTTAAGGCAATTCAACACGTTATTTCTATGCCCCATTGGAGCATGGAAACACAATGTACCATAGTTTCTTTCGGTGAGAGGAGAAGCTGGAATAAAGCACACTGAATGCTATATCATTTCCAATCACTATGTGTCCCAAATATGTGCTCTCTTTCTCTTTTTCGATTTCTATTTCAAACTACTCTTCTAAATAGTTATTAATATTTT

Coding sequence (CDS)

ATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGAACCCTTTCCATGAGTAGCTACTCATGGATGGACGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCCGAGAAGCAAAATGATATGCAATCAAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCTGAGGAAGACGAGGCCAAGGGCGATGCCGAAGCTGAGGAAGGGGCTGTAGAAACTTAA

Protein sequence

MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKATTPPPESAEEDEAKGDAEAEEGAVET

Homology

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BLAST of Carg14794 vs. NCBI nr
Match: XP_022980412.1 (LIM domain-containing protein PLIM2c-like [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 1.4e-103
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXX 180
           TLEGECYHK CFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXX
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXX 180

Query: 181 XXXXXXXXXXXXXAKGDAEA--EEGAVET 208
           XXXXXXXXXXXXXAKG+AEA  EEGAVET
Sbjct: 181 XXXXXXXXXXXXXAKGNAEAQSEEGAVET 209

[Close]

BLAST of Carg14794 vs. NCBI nr
Match: XP_022924376.1 (LIM domain-containing protein PLIM2c-like [Cucurbita moschata])

HSP 1 Score: 384.8 bits (987), Expect = 1.8e-103
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXX 180
           TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXX
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXX 180

Query: 181 XXXXXXXXXXXXXAKGDAEA--EEGAVET 208
           XXXXXXXXXXXXXAKG+AEA  EEGA ET
Sbjct: 181 XXXXXXXXXXXXXAKGNAEAQSEEGAGET 209

[Close]

BLAST of Carg14794 vs. NCBI nr
Match: XP_023528481.1 (LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382.5 bits (981), Expect = 9.2e-103
Identity = 196/209 (93.78%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAXXXXX 180
           TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA   XX
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANXX 180

Query: 181 XXXXXXXXXXXXXAKGDAEA--EEGAVET 208
           XXXXXXXX     AKGDAEA  EEGA ET
Sbjct: 181 XXXXXXXXVEEDEAKGDAEAQSEEGAGET 209

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BLAST of Carg14794 vs. NCBI nr
Match: XP_004134333.2 (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 4.4e-97
Identity = 168/175 (96.00%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+QSRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 175

[Close]

BLAST of Carg14794 vs. NCBI nr
Match: XP_008438078.1 (PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 1.4e-95
Identity = 167/175 (95.43%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+ SRAPSKLSSMFSGTQDKC+AC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 174

[Close]

BLAST of Carg14794 vs. TAIR10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 294.3 bits (752), Expect = 6.0e-80
Identity = 136/175 (77.71%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKC+ C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +A
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQA 174

[Close]

BLAST of Carg14794 vs. TAIR10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-79
Identity = 132/175 (75.43%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKC+AC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+A
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQA 172

[Close]

BLAST of Carg14794 vs. TAIR10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 265.4 bits (677), Expect = 3.0e-71
Identity = 117/177 (66.10%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP-SEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP ++K     +R PS+L+ MFSGTQDKC+ C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKS 177

[Close]

BLAST of Carg14794 vs. TAIR10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-65
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+                        H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRXXXXXXXXXXXXXXXXXXXXXXXTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQT+  +EK ND  ++AP++LSS FSGTQDKC+AC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-ATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+A
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQA 175

[Close]

BLAST of Carg14794 vs. TAIR10
Match: AT3G55770.7 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 246.1 bits (627), Expect = 1.9e-65
Identity = 116/210 (55.24%), Postives = 149/210 (70.95%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K     +R PS+++  FSGTQ+KC+ CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 ----------------------------------VTLEGECYHKNCFRCAHGGCNLTHSS 176
                                             VT+E + YHK+CF+C+HGGC ++ S+
Sbjct: 121 IHNPLSYRELARKPNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGCPISPSN 180

[Close]

BLAST of Carg14794 vs. Swiss-Prot
Match: sp|O80839|PLI2A_ARATH (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78
Identity = 136/175 (77.71%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKC+ C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +A
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQA 174

[Close]

BLAST of Carg14794 vs. Swiss-Prot
Match: sp|Q1ECF5|PLI2B_ARATH (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.4e-78
Identity = 132/175 (75.43%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKC+AC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+A
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQA 172

[Close]

BLAST of Carg14794 vs. Swiss-Prot
Match: sp|O04193|WLI2A_ARATH (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.3e-70
Identity = 117/177 (66.10%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP-SEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP ++K     +R PS+L+ MFSGTQDKC+ C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKS 177

[Close]

BLAST of Carg14794 vs. Swiss-Prot
Match: sp|Q9M047|WLI2B_ARATH (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.0e-69
Identity = 116/176 (65.91%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K     +R PS+++  FSGTQ+KC+ CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKS 176

[Close]

BLAST of Carg14794 vs. Swiss-Prot
Match: sp|Q500W4|PLI2C_ARATH (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-64
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+                        H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRXXXXXXXXXXXXXXXXXXXXXXXTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQT+  +EK ND  ++AP++LSS FSGTQDKC+AC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-ATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+A
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQA 175

[Close]

BLAST of Carg14794 vs. TrEMBL
Match: tr|A0A1S3AW36|A0A1S3AW36_CUCME (LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC103483293 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 9.4e-96
Identity = 167/175 (95.43%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+ SRAPSKLSSMFSGTQDKC+AC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 174

[Close]

BLAST of Carg14794 vs. TrEMBL
Match: tr|A0A0A0L4A1|A0A0A0L4A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.1e-95
Identity = 167/175 (95.43%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+ SRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 174

[Close]

BLAST of Carg14794 vs. TrEMBL
Match: tr|A0A1S3AVG8|A0A1S3AVG8_CUCME (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.5e-90
Identity = 157/175 (89.71%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQT KPSE+QND+ +R PSKLSSMF GTQDKCS C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQT-KPSERQNDL-TRTPSKLSSMFCGTQDKCSVCTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           TLEGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEA
Sbjct: 121 TLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEA 173

[Close]

BLAST of Carg14794 vs. TrEMBL
Match: tr|A0A0A0L6A8|A0A0A0L6A8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 155/175 (88.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQT K S+K ND+ +R PSKLSSMFSGTQDKCS C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQT-KSSDKPNDL-TRTPSKLSSMFSGTQDKCSVCTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEA 176
           +LEGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEA
Sbjct: 121 SLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEA 173

[Close]

BLAST of Carg14794 vs. TrEMBL
Match: tr|W9RX88|W9RX88_9ROSA (Pollen-specific protein SF3 OS=Morus notabilis OX=981085 GN=L484_006564 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 8.8e-86
Identity = 153/195 (78.46%), Postives = 167/195 (85.64%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKAC+KTVYVV+++SLEG PYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MAFTGTLDKCKACNKTVYVVDMMSLEGVPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ--------------------TSKPSEKQNDMQSRAPSKLSSMF 120
           HFEQLFKESGNFSKNFQ                    T+K SE+QND  +RAPSKLSS+F
Sbjct: 61  HFEQLFKESGNFSKNFQTVFLLGLFANNNKRVGEKFVTAKSSERQNDQLARAPSKLSSLF 120

Query: 121 SGTQDKCSACSKTVYPLEKVTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFA 176
           SGTQDKC+ CSKTVYPLEKV+LEGECYHK+CFRCAHGGC LTHSSYAALDGVLYCKHHF 
Sbjct: 121 SGTQDKCATCSKTVYPLEKVSLEGECYHKSCFRCAHGGCPLTHSSYAALDGVLYCKHHFQ 180

The following BLAST results are available for this feature:

BLAST of Carg14794 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980412.1	1.4e-103	98.09	LIM domain-containing protein PLIM2c-like [Cucurbita maxima]	[more]
XP_022924376.1	1.8e-103	98.09	LIM domain-containing protein PLIM2c-like [Cucurbita moschata]	[more]
XP_023528481.1	9.2e-103	93.78	LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo]	[more]
XP_004134333.2	4.4e-97	96.00	PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus...	[more]
XP_008438078.1	1.4e-95	95.43	PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo]	[more]

BLAST of Carg14794 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45800.1	6.0e-80	77.71	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	1.3e-79	75.43	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	3.0e-71	66.10	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	1.1e-65	67.24	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.7	1.9e-65	55.24	GATA type zinc finger transcription factor family protein	[more]

BLAST of Carg14794 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80839\|PLI2A_ARATH	1.1e-78	77.71	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
sp\|Q1ECF5\|PLI2B_ARATH	2.4e-78	75.43	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
sp\|O04193\|WLI2A_ARATH	5.3e-70	66.10	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
sp\|Q9M047\|WLI2B_ARATH	2.0e-69	65.91	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
sp\|Q500W4\|PLI2C_ARATH	2.0e-64	67.24	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]

BLAST of Carg14794 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AW36\|A0A1S3AW36_CUCME	9.4e-96	95.43	LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC10348329...	[more]
tr\|A0A0A0L4A1\|A0A0A0L4A1_CUCSA	2.1e-95	95.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1	[more]
tr\|A0A1S3AVG8\|A0A1S3AVG8_CUCME	3.5e-90	89.71	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
tr\|A0A0A0L6A8\|A0A0A0L6A8_CUCSA	1.1e-88	88.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
tr\|W9RX88\|W9RX88_9ROSA	8.8e-86	78.46	Pollen-specific protein SF3 OS=Morus notabilis OX=981085 GN=L484_006564 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001781	Znf_LIM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14794-RA	Carg14794-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 106..158 e-value: 4.8E-13 score: 59.3 coord: 9..61 e-value: 5.4E-13 score: 59.2
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 107..162 e-value: 5.3E-11 score: 42.5 coord: 10..65 e-value: 2.2E-13 score: 50.1
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.464
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 105..165 score: 12.454
None	No IPR available	GENE3D	G3DSA:2.10.110.10		coord: 6..74 e-value: 1.7E-19 score: 71.7 coord: 101..171 e-value: 4.7E-19 score: 70.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..207
None	No IPR available	PANTHER	PTHR24206:SF22	LIM DOMAIN-CONTAINING PROTEIN PLIM2A-RELATED	coord: 1..202
None	No IPR available	PANTHER	PTHR24206	FAMILY NOT NAMED	coord: 1..202
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 7.44765E-37 score: 124.114
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 99..132
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 133..172

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14794	Cucsa.258170	Cucumber (Gy14) v1	carcgyB0693
Carg14794	CmaCh14G020190	Cucurbita maxima (Rimu)	carcmaB0874
Carg14794	CmoCh14G020810	Cucurbita moschata (Rifu)	carcmoB0850
Carg14794	Lsi05G020180	Bottle gourd (USVL1VR-Ls)	carlsiB565
Carg14794	Cp4.1LG03g16840	Cucurbita pepo (Zucchini)	carcpeB0884
Carg14794	Cp4.1LG08g01620	Cucurbita pepo (Zucchini)	carcpeB0885

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14794	Silver-seed gourd	carcarB548
Carg14794	Cucumber (Gy14) v2	carcgybB0617
Carg14794	Cucurbita maxima (Rimu)	carcmaB0877
Carg14794	Cucurbita moschata (Rifu)	carcmoB0852
Carg14794	Wild cucumber (PI 183967)	carcpiB0651
Carg14794	Cucumber (Chinese Long) v2	carcuB0644
Carg14794	Cucumber (Chinese Long) v3	carcucB0652
Carg14794	Melon (DHL92) v3.5.1	carmeB0622
Carg14794	Melon (DHL92) v3.6.1	carmedB0629
Carg14794	Watermelon (Charleston Gray)	carwcgB0602
Carg14794	Watermelon (97103) v1	carwmB0617
Carg14794	Watermelon (97103) v2	carwmbB0647
Carg14794	Wax gourd	carwgoB0738