CmaCh14G017700 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G017700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nod-factor receptor 5A
Location	Cma_Chr14 : 12844747 .. 12845851 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCCCAATCCGCCATACCCTTACCTCCTCTGCACTCTTCATTTTCTTCTTCATCTTCTTCTTCCATAACTCCGCTGCTCAACCCCCCGACGCCGACGGCTACACCTGCTCCACCAACCACACTGCCAACCCATGTCAGGCCTACGTCTTCTACCGAGCCGCCGCCCCCGGTTTCCTCGACTTGGCTACCATTGCTGACCTCTTCTGGGTTAGCCGCCTCCAAATTTCCCGCCCAAGCAATATCTCCGACTCCAACGCCACTTTCCCTCTCCTCTCCGGCCAGCCATTCTTCATTCCTATTAACTGCTTTTGCAAGTCCGTCAATTCTTCTGTCTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAATATTTGTCTTATTATCATAGGTATCTTTCTATTTATTGTTATTTCCATTTATTACTATTTCTATATCCTTATAATTTATTTGATTATAAATAAGACAACCTTAGCACTGTGTGGATTAATCAAACAAGTCAGCATCTCTTATGCTAATCTCTCCTACAAAATCAACCACGGCGATAACTTGTGGCAAGTCTCCACCTTTAAGTTTCAGAATCTTACCACTTACCAATCTGTCGAAGTCGTCAATCCCACTCTCGTCGCGGTCGATCTCCCCATCGGCGTCGGCGTCGTTTTCCCCATCTTTTGCAAGTGTCCTACTCACACCCAATCCCAAAATCGCGTCAACTTCATGATTCAGCCCACCGATACTCTGCCTTCGATAGCTTCGAGATTTGGGGTAGAGACGTCGGATATCGCAGACGCGAATCGGCCCAACCCGGAGCCGTTCGAGACGATTTTCATCCCGGTGAGTCGTCTGCCCAATTTGACGCAGCCCATTGTGGTGTCGCCGTCTCCAGAGCAGACCCCGGTCCCAGTGGTGGAGGGGAGAAACAGAGCAGTGACAGGGCTGGCCATTGGGATTGGGATTGTGGGGTTTCTGCTGATCGTGGTGGTGGGTTTGTGGGTTTGTGGAGTGGGGAAGAGGAGGAGTAAGGAAAGGGAAATGGAGGAGGGAGTTGAGAAACACTGA

mRNA sequence

ATGGAACCCCCAATCCGCCATACCCTTACCTCCTCTGCACTCTTCATTTTCTTCTTCATCTTCTTCTTCCATAACTCCGCTGCTCAACCCCCCGACGCCGACGGCTACACCTGCTCCACCAACCACACTGCCAACCCATGTCAGGCCTACGTCTTCTACCGAGCCGCCGCCCCCGGTTTCCTCGACTTGGCTACCATTGCTGACCTCTTCTGGGTTAGCCGCCTCCAAATTTCCCGCCCAAGCAATATCTCCGACTCCAACGCCACTTTCCCTCTCCTCTCCGGCCAGCCATTCTTCATTCCTATTAACTGCTTTTGCAACATCTCTTATGCTAATCTCTCCTACAAAATCAACCACGGCGATAACTTGTGGCAAGTCTCCACCTTTAAGTTTCAGAATCTTACCACTTACCAATCTGTCGAAGTCGTCAATCCCACTCTCGTCGCGGTCGATCTCCCCATCGGCGTCGGCGTCGTTTTCCCCATCTTTTGCAAGTGTCCTACTCACACCCAATCCCAAAATCGCGTCAACTTCATGATTCAGCCCACCGATACTCTGCCTTCGATAGCTTCGAGATTTGGGGTAGAGACGTCGGATATCGCAGACGCGAATCGGCCCAACCCGGAGCCGTTCGAGACGATTTTCATCCCGGTGAGTCGTCTGCCCAATTTGACGCAGCCCATTGTGGTGTCGCCGTCTCCAGAGCAGACCCCGGTCCCAGTGGTGGAGGGGAGAAACAGAGCAGTGACAGGGCTGGCCATTGGGATTGGGATTGTGGGGTTTCTGCTGATCGTGGTGGTGGGTTTGTGGGTTTGTGGAGTGGGGAAGAGGAGGAGTAAGGAAAGGGAAATGGAGGAGGGAGTTGAGAAACACTGA

Coding sequence (CDS)

ATGGAACCCCCAATCCGCCATACCCTTACCTCCTCTGCACTCTTCATTTTCTTCTTCATCTTCTTCTTCCATAACTCCGCTGCTCAACCCCCCGACGCCGACGGCTACACCTGCTCCACCAACCACACTGCCAACCCATGTCAGGCCTACGTCTTCTACCGAGCCGCCGCCCCCGGTTTCCTCGACTTGGCTACCATTGCTGACCTCTTCTGGGTTAGCCGCCTCCAAATTTCCCGCCCAAGCAATATCTCCGACTCCAACGCCACTTTCCCTCTCCTCTCCGGCCAGCCATTCTTCATTCCTATTAACTGCTTTTGCAACATCTCTTATGCTAATCTCTCCTACAAAATCAACCACGGCGATAACTTGTGGCAAGTCTCCACCTTTAAGTTTCAGAATCTTACCACTTACCAATCTGTCGAAGTCGTCAATCCCACTCTCGTCGCGGTCGATCTCCCCATCGGCGTCGGCGTCGTTTTCCCCATCTTTTGCAAGTGTCCTACTCACACCCAATCCCAAAATCGCGTCAACTTCATGATTCAGCCCACCGATACTCTGCCTTCGATAGCTTCGAGATTTGGGGTAGAGACGTCGGATATCGCAGACGCGAATCGGCCCAACCCGGAGCCGTTCGAGACGATTTTCATCCCGGTGAGTCGTCTGCCCAATTTGACGCAGCCCATTGTGGTGTCGCCGTCTCCAGAGCAGACCCCGGTCCCAGTGGTGGAGGGGAGAAACAGAGCAGTGACAGGGCTGGCCATTGGGATTGGGATTGTGGGGTTTCTGCTGATCGTGGTGGTGGGTTTGTGGGTTTGTGGAGTGGGGAAGAGGAGGAGTAAGGAAAGGGAAATGGAGGAGGGAGTTGAGAAACACTGA

Protein sequence

MEPPIRHTLTSSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCNISYANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMIQPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEEGVEKH

Homology

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BLAST of CmaCh14G017700 vs. Swiss-Prot
Match: NFP_MEDTR (Serine/threonine receptor-like kinase NFP OS=Medicago truncatula GN=NFP PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.8e-31
Identity = 95/297 (31.99%), Postives = 146/297 (49.16%), Query Frame = 1


Query: 10  TSSALFIFFFIFFFHNSAAQPP--DADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 69
           +S ALF+   +FF  N +AQP       +TC  +   + C+ YV YRA +P FL L+ I+
Sbjct: 9   SSHALFLVLMLFFLTNISAQPLYISETNFTCPVDSPPS-CETYVAYRAQSPNFLSLSNIS 68

Query: 70  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFC--NISYANLSYKINHGDNLWQ 129
           D+F +S L+I++ SNI   +    L+  Q   +P+ C C  N S+AN++Y I  GDN + 
Sbjct: 69  DIFNLSPLRIAKASNIEAEDKK--LIPDQLLLVPVTCGCTKNHSFANITYSIKQGDNFFI 128

Query: 130 VSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI----Q 189
           +S   +QNLT Y   +  NP L    LP+   V  P+FCKCP+  Q    + ++I    Q
Sbjct: 129 LSITSYQNLTNYLEFKNFNPNLSPTLLPLDTKVSVPLFCKCPSKNQLNKGIKYLITYVWQ 188

Query: 190 PTDTLPSIASRFGVETSDIADANRPN--PEPFETIFIPVSRLPNLTQPIVVSPSPEQTPV 249
             D +  ++S+FG    ++   N  N       ++ IPV+ LP L Q             
Sbjct: 189 DNDNVTLVSSKFGASQVEMLAENNHNFTASTNRSVLIPVTSLPKLDQ------------- 248

Query: 250 PVVEGRNRAVTGLAIGIGI----VGFLLIVVVGL--WVCGVGKRRSKEREMEEGVEK 291
           P   GR  +   LA+ IGI      F+L++ + L    C   KR ++     E  +K
Sbjct: 249 PSSNGRKSSSQNLALIIGISLGSAFFILVLTLSLVYVYCLKMKRLNRSTSSSETADK 289

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BLAST of CmaCh14G017700 vs. Swiss-Prot
Match: LYK4_ARATH (LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-20
Identity = 87/271 (32.10%), Postives = 142/271 (52.40%), Query Frame = 1


Query: 35  GYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLS 94
           GY+C  N     CQAYV +R+  P F  + +I+ LF V    +S  ++ S S + FP  S
Sbjct: 45  GYSC--NGLNKTCQAYVIFRST-PSFSTVTSISSLFSVDPSLVSSLNDASPSTS-FP--S 104

Query: 95  GQPFFIPINCFC--NISYANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDL 154
           GQ   IP+ C C  + S +N++Y I   D+ + ++    Q L+T Q++   N  + +  L
Sbjct: 105 GQQVIIPLTCSCTGDDSQSNITYTIQPNDSYFAIANDTLQGLSTCQALAKQN-NVSSQSL 164

Query: 155 PIGVGVVFPIFCKCPTHTQ-SQNRVNFMIQPT----DTLPSIASRFGVETSDIADANRPN 214
             G+ +V PI C CPT  Q +++ V +++  T    DT+  I+ RFGVETS    AN  +
Sbjct: 165 FPGMRIVVPIRCACPTAKQINEDGVKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMS 224

Query: 215 PE-----PFETIFIPVSRLPNLTQPIVVSPSP----EQTPVPV-VEGR-NRAVTGLAIGI 274
            E     PF TI IP+   P  T  ++  P P      +P P+  +GR ++  T +    
Sbjct: 225 FENSEVFPFTTILIPLVNPPANTNSLIPPPPPPPPQSVSPPPLSPDGRKSKKKTWVYALA 284

Query: 275 GIVGFLLIV-VVGLWVCGVGKRRSKEREMEE 287
           G++G  L++ V+G  +  + K+++K +  EE
Sbjct: 285 GVLGGALVLSVIGAAIFCLSKKKTKTQTQEE 308

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BLAST of CmaCh14G017700 vs. TrEMBL
Match: A0A0A0LA24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144110 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.7e-119
Identity = 228/304 (75.00%), Postives = 245/304 (80.59%), Query Frame = 1


Query: 1   MEPPIRHTLTSSALFIF---FFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAA 60
           M  PIRH+  SS LF+F   FF FFFH SAA+ PDADGYTCS N TANPCQAYVFYRA  
Sbjct: 1   MYSPIRHS--SSILFLFSFFFFFFFFHYSAAEAPDADGYTCSANQTANPCQAYVFYRATP 60

Query: 61  PGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISY 120
           P FL+LA IADLFWVSRLQISRPSNISDSNATFPLLSGQP FIPI C C+       ISY
Sbjct: 61  PNFLNLAAIADLFWVSRLQISRPSNISDSNATFPLLSGQPLFIPITCSCHSVNASVSISY 120

Query: 121 ANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHT 180
           ANLSYKIN GDN W VST KFQNLTT+QSVE+ NPTL+A +L IGV VVFPIFCKCP  T
Sbjct: 121 ANLSYKINAGDNFWLVSTSKFQNLTTFQSVEIANPTLIATNLSIGVDVVFPIFCKCPNPT 180

Query: 181 QSQNRVNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQ 240
           Q +NRVNFMI    QP DTL SIASRFGV+TS+I DAN PNP+PFETIFIPVSRLPNLTQ
Sbjct: 181 QLRNRVNFMISYVIQPADTLSSIASRFGVQTSEIRDANWPNPQPFETIFIPVSRLPNLTQ 240

Query: 241 PIVVSPSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 291
           PIV+ PSPEQ P PV E +NR VTGLAIG+GIVGFLLI+ VGL V GVGKRR  EREMEE
Sbjct: 241 PIVLPPSPEQAPAPVREDKNRVVTGLAIGLGIVGFLLILAVGLLVFGVGKRRKNEREMEE 300

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BLAST of CmaCh14G017700 vs. TrEMBL
Match: A0A067ESN2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037224mg PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73
Identity = 150/293 (51.19%), Postives = 193/293 (65.87%), Query Frame = 1


Query: 11  SSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLF 70
           S   F FFF+F +H S AQP    GYTCS N T  PC+ Y FYRA+AP FLDLA+IADLF
Sbjct: 11  SVLFFFFFFLFSYHQSQAQP-STTGYTCSANQTTYPCRTYAFYRASAPDFLDLASIADLF 70

Query: 71  WVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYKINHGDNL 130
            VSRL IS PSNIS  ++  PL+  QP F+PI C CN       IS+ANLSY I  GD  
Sbjct: 71  SVSRLMISEPSNISSPSS--PLIQNQPLFVPITCSCNTLNASYTISFANLSYTIKSGDTF 130

Query: 131 WQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI--- 190
           + VST K+QNLTTYQSVEVVNPT V   L +G  ++FP+FCKCP  TQ +NRVN+++   
Sbjct: 131 YLVSTNKYQNLTTYQSVEVVNPTFVPTKLEVGDVIIFPVFCKCPNQTQLRNRVNYLVSYV 190

Query: 191 -QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQTPV 250
            QP++ L S+ASRFG+ET  I D N  N  PF+T+F+PV+RLP L QP V   +P     
Sbjct: 191 LQPSENLSSVASRFGIETQAIIDVNGNNIRPFDTLFVPVARLPELKQPAVAPSTPPSAET 250

Query: 251 PVVE-GRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVG-KRRSKEREMEEGVEK 291
           P  +  R   + GL+IG+GI G  L++V G+W+      ++ +ERE++E  +K
Sbjct: 251 PSRKTERKGVIIGLSIGLGICGASLVLVAGMWIYREALLKKKREREIDEQKQK 300

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BLAST of CmaCh14G017700 vs. TrEMBL
Match: B9RTG0_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0909430 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 8.5e-73
Identity = 151/290 (52.07%), Postives = 191/290 (65.86%), Query Frame = 1


Query: 8   TLTSSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 67
           +L  S LFIF+     ++  AQP   DG TC+ N T+NPCQ Y FYRA AP FLDLA++ 
Sbjct: 6   SLILSFLFIFYLNHVLNHLRAQP-STDGITCTVNQTSNPCQTYAFYRAMAPNFLDLASVG 65

Query: 68  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFC-------NISYANLSYKINHG 127
           DLF VSRL IS PSNIS  ++  PL+  Q  F+PI+C C       N+SYANLSY I   
Sbjct: 66  DLFSVSRLMISEPSNISSPSS--PLIPNQSLFVPISCSCRAINSTTNLSYANLSYTIKKD 125

Query: 128 DNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI 187
           D  + VST +FQNLTTYQ+V+VVNPTLV   L IG  V+FP+FCKCP  TQ QN+VNFMI
Sbjct: 126 DTFYLVSTTQFQNLTTYQAVQVVNPTLVPTLLEIGQEVIFPVFCKCPNQTQLQNQVNFMI 185

Query: 188 ----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQ 247
               QP+D L  +AS FG  T  I D N  N +PF+TIF+PV+RLP L+QP+VV   P +
Sbjct: 186 SYVFQPSDNLSLVASSFGTNTQSIVDVNGNNIQPFDTIFVPVNRLPQLSQPVVVPSVPTE 245

Query: 248 TPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 287
                 + R   +TGLA+G+G+ GFLLI+++G WV   GK   K+ E +E
Sbjct: 246 K-----KERKGLITGLAVGLGVCGFLLILIIGSWVFREGKLNRKKSEEDE 287

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BLAST of CmaCh14G017700 vs. TrEMBL
Match: F6HDX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04610 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 6.1e-71
Identity = 147/280 (52.50%), Postives = 186/280 (66.43%), Query Frame = 1


Query: 4   PIRHTLTSSALFIFFFIFFFHNSAAQP-PDADGYTCSTNHTANPCQAYVFYRAAAPGFLD 63
           P+  T++S  LF F      H S AQP P+A GY CS N ++ PC  + FY A +P FLD
Sbjct: 5   PLNDTVSSLLLFFFLCSLHLHYSQAQPEPNATGYPCSANLSSYPCHTFAFYTATSPNFLD 64

Query: 64  LATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSY 123
           LA+I DLFWVSRL IS PSNIS  +   PL++GQ  F+P+NC CN       ISYANLSY
Sbjct: 65  LASIGDLFWVSRLMISEPSNISSPSN--PLVAGQSLFVPLNCSCNSVNTTTAISYANLSY 124

Query: 124 KINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNR 183
            I  GD  + VSTF F NLTTY SVE+VNPTLV  DL +G  V+FPIFCKCP  TQ +N 
Sbjct: 125 TIKSGDTFYLVSTFSFLNLTTYYSVEIVNPTLVPTDLDVGDKVIFPIFCKCPNETQLRNG 184

Query: 184 VNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVS 243
           VNF+I    QP+D L  +A+  G +T+ I D N  N +PF+TIF+PVSRLPN++QP V  
Sbjct: 185 VNFLISYVFQPSDNLTGVAASLGSDTASIIDVNGDNIQPFQTIFVPVSRLPNISQPNVT- 244

Query: 244 PSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWV 272
            +   T V  VE R   + GLAIG+G+ G LL++++G+WV
Sbjct: 245 -ASVATSVRKVE-RKGVIIGLAIGLGVCGILLVLLIGVWV 279

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BLAST of CmaCh14G017700 vs. TrEMBL
Match: A0A067KZA2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02266 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.3e-70
Identity = 148/292 (50.68%), Postives = 186/292 (63.70%), Query Frame = 1


Query: 8   TLTSSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 67
           TL  S+L IF    +  N     P  +G+TC+ N T+ PCQ Y FYRA AP FLDL +I 
Sbjct: 5   TLPFSSLLIFLCFNYILNHLQAQPSTEGFTCTVNLTSYPCQTYAFYRAMAPDFLDLGSIG 64

Query: 68  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCNI---------SYANLSYKIN 127
           DLF VSRL IS+PSNIS  ++  PL+ GQ  F+P++C CN          SYANLSY I 
Sbjct: 65  DLFSVSRLMISKPSNISSPSS--PLIPGQSLFVPLSCSCNTVNITTGVFYSYANLSYTIK 124

Query: 128 HGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNF 187
            GD  + VST  FQNLTTYQSVEVVNPTLV  +L IG  V+FPIFC CP  TQ QN+VN+
Sbjct: 125 KGDTFYMVSTNYFQNLTTYQSVEVVNPTLVPTNLSIGQNVIFPIFCMCPNQTQLQNQVNY 184

Query: 188 MI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSP 247
           +I    QP+D L  +ASRFGVE   I D N    +PF+TIFIP+++LP L+QP+V +   
Sbjct: 185 LISYVFQPSDNLSLVASRFGVERQSIIDVNGNRTQPFDTIFIPLNKLPQLSQPVVAASVS 244

Query: 248 EQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 287
                   + R   + GLA+G+GI G LLI++ G WV   GK + KERE +E
Sbjct: 245 SGR-----KERKGLIAGLAVGLGISGILLILMSGFWVYREGKLKRKEREEDE 289

[Close]

BLAST of CmaCh14G017700 vs. TAIR10
Match: AT2G23770.1 (AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 87/271 (32.10%), Postives = 142/271 (52.40%), Query Frame = 1


Query: 35  GYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLS 94
           GY+C  N     CQAYV +R+  P F  + +I+ LF V    +S  ++ S S + FP  S
Sbjct: 45  GYSC--NGLNKTCQAYVIFRST-PSFSTVTSISSLFSVDPSLVSSLNDASPSTS-FP--S 104

Query: 95  GQPFFIPINCFC--NISYANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDL 154
           GQ   IP+ C C  + S +N++Y I   D+ + ++    Q L+T Q++   N  + +  L
Sbjct: 105 GQQVIIPLTCSCTGDDSQSNITYTIQPNDSYFAIANDTLQGLSTCQALAKQN-NVSSQSL 164

Query: 155 PIGVGVVFPIFCKCPTHTQ-SQNRVNFMIQPT----DTLPSIASRFGVETSDIADANRPN 214
             G+ +V PI C CPT  Q +++ V +++  T    DT+  I+ RFGVETS    AN  +
Sbjct: 165 FPGMRIVVPIRCACPTAKQINEDGVKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMS 224

Query: 215 PE-----PFETIFIPVSRLPNLTQPIVVSPSP----EQTPVPV-VEGR-NRAVTGLAIGI 274
            E     PF TI IP+   P  T  ++  P P      +P P+  +GR ++  T +    
Sbjct: 225 FENSEVFPFTTILIPLVNPPANTNSLIPPPPPPPPQSVSPPPLSPDGRKSKKKTWVYALA 284

Query: 275 GIVGFLLIV-VVGLWVCGVGKRRSKEREMEE 287
           G++G  L++ V+G  +  + K+++K +  EE
Sbjct: 285 GVLGGALVLSVIGAAIFCLSKKKTKTQTQEE 308

[Close]

BLAST of CmaCh14G017700 vs. NCBI nr
Match: gi|778678340|ref|XP_011650952.1| (PREDICTED: lysM domain receptor-like kinase 4 [Cucumis sativus])

HSP 1 Score: 436.4 bits (1121), Expect = 3.9e-119
Identity = 228/304 (75.00%), Postives = 245/304 (80.59%), Query Frame = 1


Query: 1   MEPPIRHTLTSSALFIF---FFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAA 60
           M  PIRH+  SS LF+F   FF FFFH SAA+ PDADGYTCS N TANPCQAYVFYRA  
Sbjct: 1   MYSPIRHS--SSILFLFSFFFFFFFFHYSAAEAPDADGYTCSANQTANPCQAYVFYRATP 60

Query: 61  PGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISY 120
           P FL+LA IADLFWVSRLQISRPSNISDSNATFPLLSGQP FIPI C C+       ISY
Sbjct: 61  PNFLNLAAIADLFWVSRLQISRPSNISDSNATFPLLSGQPLFIPITCSCHSVNASVSISY 120

Query: 121 ANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHT 180
           ANLSYKIN GDN W VST KFQNLTT+QSVE+ NPTL+A +L IGV VVFPIFCKCP  T
Sbjct: 121 ANLSYKINAGDNFWLVSTSKFQNLTTFQSVEIANPTLIATNLSIGVDVVFPIFCKCPNPT 180

Query: 181 QSQNRVNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQ 240
           Q +NRVNFMI    QP DTL SIASRFGV+TS+I DAN PNP+PFETIFIPVSRLPNLTQ
Sbjct: 181 QLRNRVNFMISYVIQPADTLSSIASRFGVQTSEIRDANWPNPQPFETIFIPVSRLPNLTQ 240

Query: 241 PIVVSPSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 291
           PIV+ PSPEQ P PV E +NR VTGLAIG+GIVGFLLI+ VGL V GVGKRR  EREMEE
Sbjct: 241 PIVLPPSPEQAPAPVREDKNRVVTGLAIGLGIVGFLLILAVGLLVFGVGKRRKNEREMEE 300

[Close]

BLAST of CmaCh14G017700 vs. NCBI nr
Match: gi|659076279|ref|XP_008438594.1| (PREDICTED: lysM domain receptor-like kinase 4 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 5.2e-116
Identity = 216/287 (75.26%), Postives = 232/287 (80.84%), Query Frame = 1


Query: 15  FIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSR 74
           F FFF FFFH SAAQ PDADGYTCS N TANPCQAYVFYRA+ P FLDLA IADLFWVSR
Sbjct: 19  FFFFFFFFFHYSAAQAPDADGYTCSANQTANPCQAYVFYRASPPNFLDLAAIADLFWVSR 78

Query: 75  LQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYKINHGDNLWQVS 134
           L+ISRPSNISDSNATFPLL GQP FIPI C C+       ISYANLSYKIN GDN W VS
Sbjct: 79  LEISRPSNISDSNATFPLLPGQPLFIPITCSCHSVNASVSISYANLSYKINAGDNFWLVS 138

Query: 135 TFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFM----IQPT 194
           T KFQNLTT+QSVE+ NPTL+  +L IGV VVFPIFCKCP  TQ QNR+NFM    IQP 
Sbjct: 139 TSKFQNLTTFQSVEIANPTLIPTNLDIGVNVVFPIFCKCPNPTQLQNRINFMVSYVIQPA 198

Query: 195 DTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQTPVPVVE 254
           DT+ SIASRFGV+ S+I  AN PNP+PFETIFIPVS LPNLTQPIV+ PSPEQ P PV E
Sbjct: 199 DTMSSIASRFGVQASEIRAANWPNPQPFETIFIPVSHLPNLTQPIVLPPSPEQAPAPVRE 258

Query: 255 GRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEEGVEK 291
            +NRAVTGLAI +GIVGFLLI+ VGLWV GVGKRR  EREMEE  EK
Sbjct: 259 VKNRAVTGLAIALGIVGFLLILAVGLWVVGVGKRRKNEREMEERFEK 305

[Close]

BLAST of CmaCh14G017700 vs. NCBI nr
Match: gi|1009119721|ref|XP_015876533.1| (PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba])

HSP 1 Score: 295.8 bits (756), Expect = 8.2e-77
Identity = 160/279 (57.35%), Postives = 191/279 (68.46%), Query Frame = 1


Query: 7   HTLTSSALFIFFFIFFFHNSAAQP-PDADGYTCSTNHTAN--PCQAYVFYRAAAPGFLDL 66
           H  +S  LF FFFIFF  +S AQP P  DGYTCS N T N  PCQ YVFYRA AP +LDL
Sbjct: 6   HYDSSLLLFFFFFIFFVFHSKAQPLPTTDGYTCSANQTTNSFPCQTYVFYRAMAPDYLDL 65

Query: 67  ATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYK 126
           A+I DLF VSRL IS PSNIS  ++  PL+  Q  F+PI C CN       ISYAN+SY 
Sbjct: 66  ASIGDLFSVSRLMISEPSNISSPSS--PLVPNQSLFVPITCSCNSLNTSETISYANISYT 125

Query: 127 INHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRV 186
           I  GD  + +ST KFQNLTTYQSVEVVNP LVA +L +GV V+FPIFCKCP  TQ QNRV
Sbjct: 126 ITPGDTFYDISTKKFQNLTTYQSVEVVNPELVATNLTVGVNVIFPIFCKCPNQTQLQNRV 185

Query: 187 NFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSP 246
           N+++    QP+D + ++ASRFGVETS I D N  N + ++TIF+PV++LP L QP VV  
Sbjct: 186 NYLVSYVLQPSDNISTVASRFGVETSSIIDVNGNNSQTWDTIFVPVAQLPELAQPTVVPS 245

Query: 247 SPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWV 272
           SP        + R   VTGLAIG+GI G LL++V G WV
Sbjct: 246 SPPGNN----DDREGVVTGLAIGLGITGVLLLLVSGFWV 278

[Close]

BLAST of CmaCh14G017700 vs. NCBI nr
Match: gi|1009174665|ref|XP_015868460.1| (PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba])

HSP 1 Score: 293.1 bits (749), Expect = 5.3e-76
Identity = 161/280 (57.50%), Postives = 192/280 (68.57%), Query Frame = 1


Query: 7   HTLTSSALFIFFF-IFFFHNSAAQP-PDADGYTCSTNHTAN--PCQAYVFYRAAAPGFLD 66
           H  +S  LF+FFF IFF  +S AQP P  DGYTCS N T N  PCQ YVFYRA AP FLD
Sbjct: 6   HYDSSLLLFLFFFFIFFVFHSKAQPLPTTDGYTCSANQTTNSFPCQTYVFYRAMAPDFLD 65

Query: 67  LATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSY 126
           LA+I DLF VSRL IS PSNIS  ++  PL+  Q  F+PI C CN       ISYAN+SY
Sbjct: 66  LASIGDLFSVSRLMISEPSNISSPSS--PLVPNQSLFVPITCSCNSLNTSETISYANISY 125

Query: 127 KINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNR 186
            I  GD  + +ST KFQNLTTYQSVEVVNP LVA +L +GV V+FPIFCKCP  TQ QNR
Sbjct: 126 TITPGDTFYDISTKKFQNLTTYQSVEVVNPELVATNLTVGVNVIFPIFCKCPNQTQLQNR 185

Query: 187 VNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVS 246
           VN+++    QP+D + ++ASRFGVETS I D N  N + ++TIF+PV++LP L QP VV 
Sbjct: 186 VNYLVSYVLQPSDNISTVASRFGVETSSIIDVNGNNSQTWDTIFVPVAQLPELAQPTVVP 245

Query: 247 PSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWV 272
            SP        + R   VTGLAIG+GI G LL++V G WV
Sbjct: 246 SSPPGNN----DDREGVVTGLAIGLGITGVLLLLVSGFWV 279

[Close]

BLAST of CmaCh14G017700 vs. NCBI nr
Match: gi|470104040|ref|XP_004288425.1| (PREDICTED: lysM domain receptor-like kinase 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 290.0 bits (741), Expect = 4.5e-75
Identity = 161/285 (56.49%), Postives = 201/285 (70.53%), Query Frame = 1


Query: 12  SALFIFFFIFF---FHNSAAQ-PPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 71
           S+LF+FFF+ F    H S AQ  P ADGYTCS N T NPCQAY +YRA AP F+DLA+IA
Sbjct: 10  SSLFLFFFLCFHLVLHLSEAQIGPPADGYTCSANETTNPCQAYAYYRAMAPNFIDLASIA 69

Query: 72  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYKINHG 131
           DLF VSRL IS+PSNIS  + T PL+  QP F+P++C C        IS+ANLS+ I  G
Sbjct: 70  DLFSVSRLMISKPSNIS--SPTSPLIQDQPLFVPLSCSCKSVNSSTAISFANLSHTIIQG 129

Query: 132 DNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI 191
           D  + +ST  FQNLTTYQSVE+VNPTLVA +L IGV   FPIFCKCP  TQ QN+VN+++
Sbjct: 130 DTFYHLSTQTFQNLTTYQSVELVNPTLVATNLTIGVTAYFPIFCKCPNKTQLQNKVNYLV 189

Query: 192 ----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQ 251
               QP+D   ++ASRFGV+T  I + N  N +PF+TIFIPV++LP L+QP  VSPSP  
Sbjct: 190 SYVFQPSDNFSTVASRFGVQTKSIVEVNGNNTQPFDTIFIPVTQLPVLSQP-TVSPSP-- 249

Query: 252 TPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVG--KRRS 280
            P  +   R   +TGLA+G+GI GF+LI+VVG+ V G G  K+RS
Sbjct: 250 -PPGIKTERKGVITGLAVGLGITGFMLILVVGVLVFGGGLVKKRS 288

The following BLAST results are available for this feature:

BLAST of CmaCh14G017700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFP_MEDTR	8.8e-31	31.99	Serine/threonine receptor-like kinase NFP OS=Medicago truncatula GN=NFP PE=1 SV=...	[more]
LYK4_ARATH	1.8e-20	32.10	LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4 PE=1 SV=1	[more]

BLAST of CmaCh14G017700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA24_CUCSA	2.7e-119	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144110 PE=4 SV=1	[more]
A0A067ESN2_CITSI	2.2e-73	51.19	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037224mg PE=4 SV=1	[more]
B9RTG0_RICCO	8.5e-73	52.07	Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCO...	[more]
F6HDX0_VITVI	6.1e-71	52.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04610 PE=4 SV=...	[more]
A0A067KZA2_JATCU	2.3e-70	50.68	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02266 PE=4 SV=1	[more]

BLAST of CmaCh14G017700 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23770.1	1.0e-21	32.10	protein kinase family protein / peptidoglycan-binding LysM domain-co...	[more]

BLAST of CmaCh14G017700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778678340\|ref\|XP_011650952.1\|	3.9e-119	75.00	PREDICTED: lysM domain receptor-like kinase 4 [Cucumis sativus]	[more]
gi\|659076279\|ref\|XP_008438594.1\|	5.2e-116	75.26	PREDICTED: lysM domain receptor-like kinase 4 [Cucumis melo]	[more]
gi\|1009119721\|ref\|XP_015876533.1\|	8.2e-77	57.35	PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba]	[more]
gi\|1009174665\|ref\|XP_015868460.1\|	5.3e-76	57.50	PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba]	[more]
gi\|470104040\|ref\|XP_004288425.1\|	4.5e-75	56.49	PREDICTED: lysM domain receptor-like kinase 4 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018392	LysM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G017700.1	CmaCh14G017700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	GENE3D	G3DSA:3.10.350.10		coord: 180..205 score: 2.
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 180..205 score: 3.
None	No IPR available	PANTHER	PTHR33734	FAMILY NOT NAMED	coord: 5..230 score: 8.0
None	No IPR available	PANTHER	PTHR33734:SF6	SUBFAMILY NOT NAMED	coord: 5..230 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G017700	Cucsa.254810	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G017700	Cla021574	Watermelon (97103) v1	cmawmB242
CmaCh14G017700	Csa3G144110	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G017700	MELO3C006481	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G017700	CSPI03G12580	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G017700	CmoCh06G013620	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G017700	CmoCh14G018070	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G017700	Lsi05G016580	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G017700	Cp4.1LG08g03790	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G017700	MELO3C006481.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G017700	CsaV3_3G012700	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G017700	Cla97C05G085750	Watermelon (97103) v2	cmawmbB263
CmaCh14G017700	Bhi01G000532	Wax gourd	cmawgoB0328
CmaCh14G017700	CsGy3G012740	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G017700	Carg06187	Silver-seed gourd	carcmaB1320
CmaCh14G017700	Carg16594	Silver-seed gourd	carcmaB0325

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G017700	CmaCh06G013490	Cucurbita maxima (Rimu)	cmacmaB284

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G017700	Cucumber (Chinese Long) v3	cmacucB0277
CmaCh14G017700	Cucumber (Chinese Long) v3	cmacucB0278
CmaCh14G017700	Watermelon (97103) v2	cmawmbB266
CmaCh14G017700	Watermelon (97103) v2	cmawmbB273
CmaCh14G017700	Wax gourd	cmawgoB0310
CmaCh14G017700	Wax gourd	cmawgoB0344
CmaCh14G017700	Cucurbita maxima (Rimu)	cmacmaB015
CmaCh14G017700	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh14G017700	Cucurbita maxima (Rimu)	cmacmaB267
CmaCh14G017700	Cucurbita maxima (Rimu)	cmacmaB296
CmaCh14G017700	Cucumber (Gy14) v1	cgycmaB1073
CmaCh14G017700	Cucurbita moschata (Rifu)	cmacmoB251
CmaCh14G017700	Cucurbita moschata (Rifu)	cmacmoB279
CmaCh14G017700	Wild cucumber (PI 183967)	cmacpiB240
CmaCh14G017700	Cucumber (Chinese Long) v2	cmacuB238
CmaCh14G017700	Melon (DHL92) v3.5.1	cmameB235
CmaCh14G017700	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G017700	Watermelon (Charleston Gray)	cmawcgB235
CmaCh14G017700	Watermelon (Charleston Gray)	cmawcgB240
CmaCh14G017700	Watermelon (97103) v1	cmawmB236
CmaCh14G017700	Watermelon (97103) v1	cmawmB250
CmaCh14G017700	Cucurbita pepo (Zucchini)	cmacpeB259
CmaCh14G017700	Cucurbita pepo (Zucchini)	cmacpeB266
CmaCh14G017700	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G017700	Cucurbita pepo (Zucchini)	cmacpeB290
CmaCh14G017700	Bottle gourd (USVL1VR-Ls)	cmalsiB225
CmaCh14G017700	Bottle gourd (USVL1VR-Ls)	cmalsiB247
CmaCh14G017700	Cucumber (Gy14) v2	cgybcmaB188
CmaCh14G017700	Silver-seed gourd	carcmaB0313
CmaCh14G017700	Silver-seed gourd	carcmaB0453
CmaCh14G017700	Silver-seed gourd	carcmaB1075