CmaCh14G017700.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G017700.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nod-factor receptor 5A
Location	Cma_Chr14 : 12844747 .. 12845851 (+)
Sequence length	876

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCCCAATCCGCCATACCCTTACCTCCTCTGCACTCTTCATTTTCTTCTTCATCTTCTTCTTCCATAACTCCGCTGCTCAACCCCCCGACGCCGACGGCTACACCTGCTCCACCAACCACACTGCCAACCCATGTCAGGCCTACGTCTTCTACCGAGCCGCCGCCCCCGGTTTCCTCGACTTGGCTACCATTGCTGACCTCTTCTGGGTTAGCCGCCTCCAAATTTCCCGCCCAAGCAATATCTCCGACTCCAACGCCACTTTCCCTCTCCTCTCCGGCCAGCCATTCTTCATTCCTATTAACTGCTTTTGCAAGTCCGTCAATTCTTCTGTCTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAATATTTGTCTTATTATCATAGGTATCTTTCTATTTATTGTTATTTCCATTTATTACTATTTCTATATCCTTATAATTTATTTGATTATAAATAAGACAACCTTAGCACTGTGTGGATTAATCAAACAAGTCAGCATCTCTTATGCTAATCTCTCCTACAAAATCAACCACGGCGATAACTTGTGGCAAGTCTCCACCTTTAAGTTTCAGAATCTTACCACTTACCAATCTGTCGAAGTCGTCAATCCCACTCTCGTCGCGGTCGATCTCCCCATCGGCGTCGGCGTCGTTTTCCCCATCTTTTGCAAGTGTCCTACTCACACCCAATCCCAAAATCGCGTCAACTTCATGATTCAGCCCACCGATACTCTGCCTTCGATAGCTTCGAGATTTGGGGTAGAGACGTCGGATATCGCAGACGCGAATCGGCCCAACCCGGAGCCGTTCGAGACGATTTTCATCCCGGTGAGTCGTCTGCCCAATTTGACGCAGCCCATTGTGGTGTCGCCGTCTCCAGAGCAGACCCCGGTCCCAGTGGTGGAGGGGAGAAACAGAGCAGTGACAGGGCTGGCCATTGGGATTGGGATTGTGGGGTTTCTGCTGATCGTGGTGGTGGGTTTGTGGGTTTGTGGAGTGGGGAAGAGGAGGAGTAAGGAAAGGGAAATGGAGGAGGGAGTTGAGAAACACTGA

mRNA sequence

ATGGAACCCCCAATCCGCCATACCCTTACCTCCTCTGCACTCTTCATTTTCTTCTTCATCTTCTTCTTCCATAACTCCGCTGCTCAACCCCCCGACGCCGACGGCTACACCTGCTCCACCAACCACACTGCCAACCCATGTCAGGCCTACGTCTTCTACCGAGCCGCCGCCCCCGGTTTCCTCGACTTGGCTACCATTGCTGACCTCTTCTGGGTTAGCCGCCTCCAAATTTCCCGCCCAAGCAATATCTCCGACTCCAACGCCACTTTCCCTCTCCTCTCCGGCCAGCCATTCTTCATTCCTATTAACTGCTTTTGCAACATCTCTTATGCTAATCTCTCCTACAAAATCAACCACGGCGATAACTTGTGGCAAGTCTCCACCTTTAAGTTTCAGAATCTTACCACTTACCAATCTGTCGAAGTCGTCAATCCCACTCTCGTCGCGGTCGATCTCCCCATCGGCGTCGGCGTCGTTTTCCCCATCTTTTGCAAGTGTCCTACTCACACCCAATCCCAAAATCGCGTCAACTTCATGATTCAGCCCACCGATACTCTGCCTTCGATAGCTTCGAGATTTGGGGTAGAGACGTCGGATATCGCAGACGCGAATCGGCCCAACCCGGAGCCGTTCGAGACGATTTTCATCCCGGTGAGTCGTCTGCCCAATTTGACGCAGCCCATTGTGGTGTCGCCGTCTCCAGAGCAGACCCCGGTCCCAGTGGTGGAGGGGAGAAACAGAGCAGTGACAGGGCTGGCCATTGGGATTGGGATTGTGGGGTTTCTGCTGATCGTGGTGGTGGGTTTGTGGGTTTGTGGAGTGGGGAAGAGGAGGAGTAAGGAAAGGGAAATGGAGGAGGGAGTTGAGAAACACTGA

Coding sequence (CDS)

ATGGAACCCCCAATCCGCCATACCCTTACCTCCTCTGCACTCTTCATTTTCTTCTTCATCTTCTTCTTCCATAACTCCGCTGCTCAACCCCCCGACGCCGACGGCTACACCTGCTCCACCAACCACACTGCCAACCCATGTCAGGCCTACGTCTTCTACCGAGCCGCCGCCCCCGGTTTCCTCGACTTGGCTACCATTGCTGACCTCTTCTGGGTTAGCCGCCTCCAAATTTCCCGCCCAAGCAATATCTCCGACTCCAACGCCACTTTCCCTCTCCTCTCCGGCCAGCCATTCTTCATTCCTATTAACTGCTTTTGCAACATCTCTTATGCTAATCTCTCCTACAAAATCAACCACGGCGATAACTTGTGGCAAGTCTCCACCTTTAAGTTTCAGAATCTTACCACTTACCAATCTGTCGAAGTCGTCAATCCCACTCTCGTCGCGGTCGATCTCCCCATCGGCGTCGGCGTCGTTTTCCCCATCTTTTGCAAGTGTCCTACTCACACCCAATCCCAAAATCGCGTCAACTTCATGATTCAGCCCACCGATACTCTGCCTTCGATAGCTTCGAGATTTGGGGTAGAGACGTCGGATATCGCAGACGCGAATCGGCCCAACCCGGAGCCGTTCGAGACGATTTTCATCCCGGTGAGTCGTCTGCCCAATTTGACGCAGCCCATTGTGGTGTCGCCGTCTCCAGAGCAGACCCCGGTCCCAGTGGTGGAGGGGAGAAACAGAGCAGTGACAGGGCTGGCCATTGGGATTGGGATTGTGGGGTTTCTGCTGATCGTGGTGGTGGGTTTGTGGGTTTGTGGAGTGGGGAAGAGGAGGAGTAAGGAAAGGGAAATGGAGGAGGGAGTTGAGAAACACTGA

Protein sequence

MEPPIRHTLTSSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCNISYANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMIQPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEEGVEKH

Homology

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BLAST of CmaCh14G017700.1 vs. Swiss-Prot
Match: NFP_MEDTR (Serine/threonine receptor-like kinase NFP OS=Medicago truncatula GN=NFP PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.8e-31
Identity = 95/297 (31.99%), Postives = 146/297 (49.16%), Query Frame = 1


Query: 10  TSSALFIFFFIFFFHNSAAQPP--DADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 69
           +S ALF+   +FF  N +AQP       +TC  +   + C+ YV YRA +P FL L+ I+
Sbjct: 9   SSHALFLVLMLFFLTNISAQPLYISETNFTCPVDSPPS-CETYVAYRAQSPNFLSLSNIS 68

Query: 70  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFC--NISYANLSYKINHGDNLWQ 129
           D+F +S L+I++ SNI   +    L+  Q   +P+ C C  N S+AN++Y I  GDN + 
Sbjct: 69  DIFNLSPLRIAKASNIEAEDKK--LIPDQLLLVPVTCGCTKNHSFANITYSIKQGDNFFI 128

Query: 130 VSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI----Q 189
           +S   +QNLT Y   +  NP L    LP+   V  P+FCKCP+  Q    + ++I    Q
Sbjct: 129 LSITSYQNLTNYLEFKNFNPNLSPTLLPLDTKVSVPLFCKCPSKNQLNKGIKYLITYVWQ 188

Query: 190 PTDTLPSIASRFGVETSDIADANRPN--PEPFETIFIPVSRLPNLTQPIVVSPSPEQTPV 249
             D +  ++S+FG    ++   N  N       ++ IPV+ LP L Q             
Sbjct: 189 DNDNVTLVSSKFGASQVEMLAENNHNFTASTNRSVLIPVTSLPKLDQ------------- 248

Query: 250 PVVEGRNRAVTGLAIGIGI----VGFLLIVVVGL--WVCGVGKRRSKEREMEEGVEK 291
           P   GR  +   LA+ IGI      F+L++ + L    C   KR ++     E  +K
Sbjct: 249 PSSNGRKSSSQNLALIIGISLGSAFFILVLTLSLVYVYCLKMKRLNRSTSSSETADK 289

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BLAST of CmaCh14G017700.1 vs. Swiss-Prot
Match: LYK4_ARATH (LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-20
Identity = 87/271 (32.10%), Postives = 142/271 (52.40%), Query Frame = 1


Query: 35  GYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLS 94
           GY+C  N     CQAYV +R+  P F  + +I+ LF V    +S  ++ S S + FP  S
Sbjct: 45  GYSC--NGLNKTCQAYVIFRST-PSFSTVTSISSLFSVDPSLVSSLNDASPSTS-FP--S 104

Query: 95  GQPFFIPINCFC--NISYANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDL 154
           GQ   IP+ C C  + S +N++Y I   D+ + ++    Q L+T Q++   N  + +  L
Sbjct: 105 GQQVIIPLTCSCTGDDSQSNITYTIQPNDSYFAIANDTLQGLSTCQALAKQN-NVSSQSL 164

Query: 155 PIGVGVVFPIFCKCPTHTQ-SQNRVNFMIQPT----DTLPSIASRFGVETSDIADANRPN 214
             G+ +V PI C CPT  Q +++ V +++  T    DT+  I+ RFGVETS    AN  +
Sbjct: 165 FPGMRIVVPIRCACPTAKQINEDGVKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMS 224

Query: 215 PE-----PFETIFIPVSRLPNLTQPIVVSPSP----EQTPVPV-VEGR-NRAVTGLAIGI 274
            E     PF TI IP+   P  T  ++  P P      +P P+  +GR ++  T +    
Sbjct: 225 FENSEVFPFTTILIPLVNPPANTNSLIPPPPPPPPQSVSPPPLSPDGRKSKKKTWVYALA 284

Query: 275 GIVGFLLIV-VVGLWVCGVGKRRSKEREMEE 287
           G++G  L++ V+G  +  + K+++K +  EE
Sbjct: 285 GVLGGALVLSVIGAAIFCLSKKKTKTQTQEE 308

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BLAST of CmaCh14G017700.1 vs. TrEMBL
Match: A0A0A0LA24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144110 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.7e-119
Identity = 228/304 (75.00%), Postives = 245/304 (80.59%), Query Frame = 1


Query: 1   MEPPIRHTLTSSALFIF---FFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAA 60
           M  PIRH+  SS LF+F   FF FFFH SAA+ PDADGYTCS N TANPCQAYVFYRA  
Sbjct: 1   MYSPIRHS--SSILFLFSFFFFFFFFHYSAAEAPDADGYTCSANQTANPCQAYVFYRATP 60

Query: 61  PGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISY 120
           P FL+LA IADLFWVSRLQISRPSNISDSNATFPLLSGQP FIPI C C+       ISY
Sbjct: 61  PNFLNLAAIADLFWVSRLQISRPSNISDSNATFPLLSGQPLFIPITCSCHSVNASVSISY 120

Query: 121 ANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHT 180
           ANLSYKIN GDN W VST KFQNLTT+QSVE+ NPTL+A +L IGV VVFPIFCKCP  T
Sbjct: 121 ANLSYKINAGDNFWLVSTSKFQNLTTFQSVEIANPTLIATNLSIGVDVVFPIFCKCPNPT 180

Query: 181 QSQNRVNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQ 240
           Q +NRVNFMI    QP DTL SIASRFGV+TS+I DAN PNP+PFETIFIPVSRLPNLTQ
Sbjct: 181 QLRNRVNFMISYVIQPADTLSSIASRFGVQTSEIRDANWPNPQPFETIFIPVSRLPNLTQ 240

Query: 241 PIVVSPSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 291
           PIV+ PSPEQ P PV E +NR VTGLAIG+GIVGFLLI+ VGL V GVGKRR  EREMEE
Sbjct: 241 PIVLPPSPEQAPAPVREDKNRVVTGLAIGLGIVGFLLILAVGLLVFGVGKRRKNEREMEE 300

[Close]

BLAST of CmaCh14G017700.1 vs. TrEMBL
Match: A0A067ESN2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037224mg PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73
Identity = 150/293 (51.19%), Postives = 193/293 (65.87%), Query Frame = 1


Query: 11  SSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLF 70
           S   F FFF+F +H S AQP    GYTCS N T  PC+ Y FYRA+AP FLDLA+IADLF
Sbjct: 11  SVLFFFFFFLFSYHQSQAQP-STTGYTCSANQTTYPCRTYAFYRASAPDFLDLASIADLF 70

Query: 71  WVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYKINHGDNL 130
            VSRL IS PSNIS  ++  PL+  QP F+PI C CN       IS+ANLSY I  GD  
Sbjct: 71  SVSRLMISEPSNISSPSS--PLIQNQPLFVPITCSCNTLNASYTISFANLSYTIKSGDTF 130

Query: 131 WQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI--- 190
           + VST K+QNLTTYQSVEVVNPT V   L +G  ++FP+FCKCP  TQ +NRVN+++   
Sbjct: 131 YLVSTNKYQNLTTYQSVEVVNPTFVPTKLEVGDVIIFPVFCKCPNQTQLRNRVNYLVSYV 190

Query: 191 -QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQTPV 250
            QP++ L S+ASRFG+ET  I D N  N  PF+T+F+PV+RLP L QP V   +P     
Sbjct: 191 LQPSENLSSVASRFGIETQAIIDVNGNNIRPFDTLFVPVARLPELKQPAVAPSTPPSAET 250

Query: 251 PVVE-GRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVG-KRRSKEREMEEGVEK 291
           P  +  R   + GL+IG+GI G  L++V G+W+      ++ +ERE++E  +K
Sbjct: 251 PSRKTERKGVIIGLSIGLGICGASLVLVAGMWIYREALLKKKREREIDEQKQK 300

[Close]

BLAST of CmaCh14G017700.1 vs. TrEMBL
Match: B9RTG0_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0909430 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 8.5e-73
Identity = 151/290 (52.07%), Postives = 191/290 (65.86%), Query Frame = 1


Query: 8   TLTSSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 67
           +L  S LFIF+     ++  AQP   DG TC+ N T+NPCQ Y FYRA AP FLDLA++ 
Sbjct: 6   SLILSFLFIFYLNHVLNHLRAQP-STDGITCTVNQTSNPCQTYAFYRAMAPNFLDLASVG 65

Query: 68  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFC-------NISYANLSYKINHG 127
           DLF VSRL IS PSNIS  ++  PL+  Q  F+PI+C C       N+SYANLSY I   
Sbjct: 66  DLFSVSRLMISEPSNISSPSS--PLIPNQSLFVPISCSCRAINSTTNLSYANLSYTIKKD 125

Query: 128 DNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI 187
           D  + VST +FQNLTTYQ+V+VVNPTLV   L IG  V+FP+FCKCP  TQ QN+VNFMI
Sbjct: 126 DTFYLVSTTQFQNLTTYQAVQVVNPTLVPTLLEIGQEVIFPVFCKCPNQTQLQNQVNFMI 185

Query: 188 ----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQ 247
               QP+D L  +AS FG  T  I D N  N +PF+TIF+PV+RLP L+QP+VV   P +
Sbjct: 186 SYVFQPSDNLSLVASSFGTNTQSIVDVNGNNIQPFDTIFVPVNRLPQLSQPVVVPSVPTE 245

Query: 248 TPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 287
                 + R   +TGLA+G+G+ GFLLI+++G WV   GK   K+ E +E
Sbjct: 246 K-----KERKGLITGLAVGLGVCGFLLILIIGSWVFREGKLNRKKSEEDE 287

[Close]

BLAST of CmaCh14G017700.1 vs. TrEMBL
Match: F6HDX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04610 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 6.1e-71
Identity = 147/280 (52.50%), Postives = 186/280 (66.43%), Query Frame = 1


Query: 4   PIRHTLTSSALFIFFFIFFFHNSAAQP-PDADGYTCSTNHTANPCQAYVFYRAAAPGFLD 63
           P+  T++S  LF F      H S AQP P+A GY CS N ++ PC  + FY A +P FLD
Sbjct: 5   PLNDTVSSLLLFFFLCSLHLHYSQAQPEPNATGYPCSANLSSYPCHTFAFYTATSPNFLD 64

Query: 64  LATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSY 123
           LA+I DLFWVSRL IS PSNIS  +   PL++GQ  F+P+NC CN       ISYANLSY
Sbjct: 65  LASIGDLFWVSRLMISEPSNISSPSN--PLVAGQSLFVPLNCSCNSVNTTTAISYANLSY 124

Query: 124 KINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNR 183
            I  GD  + VSTF F NLTTY SVE+VNPTLV  DL +G  V+FPIFCKCP  TQ +N 
Sbjct: 125 TIKSGDTFYLVSTFSFLNLTTYYSVEIVNPTLVPTDLDVGDKVIFPIFCKCPNETQLRNG 184

Query: 184 VNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVS 243
           VNF+I    QP+D L  +A+  G +T+ I D N  N +PF+TIF+PVSRLPN++QP V  
Sbjct: 185 VNFLISYVFQPSDNLTGVAASLGSDTASIIDVNGDNIQPFQTIFVPVSRLPNISQPNVT- 244

Query: 244 PSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWV 272
            +   T V  VE R   + GLAIG+G+ G LL++++G+WV
Sbjct: 245 -ASVATSVRKVE-RKGVIIGLAIGLGVCGILLVLLIGVWV 279

[Close]

BLAST of CmaCh14G017700.1 vs. TrEMBL
Match: A0A067KZA2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02266 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.3e-70
Identity = 148/292 (50.68%), Postives = 186/292 (63.70%), Query Frame = 1


Query: 8   TLTSSALFIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 67
           TL  S+L IF    +  N     P  +G+TC+ N T+ PCQ Y FYRA AP FLDL +I 
Sbjct: 5   TLPFSSLLIFLCFNYILNHLQAQPSTEGFTCTVNLTSYPCQTYAFYRAMAPDFLDLGSIG 64

Query: 68  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCNI---------SYANLSYKIN 127
           DLF VSRL IS+PSNIS  ++  PL+ GQ  F+P++C CN          SYANLSY I 
Sbjct: 65  DLFSVSRLMISKPSNISSPSS--PLIPGQSLFVPLSCSCNTVNITTGVFYSYANLSYTIK 124

Query: 128 HGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNF 187
            GD  + VST  FQNLTTYQSVEVVNPTLV  +L IG  V+FPIFC CP  TQ QN+VN+
Sbjct: 125 KGDTFYMVSTNYFQNLTTYQSVEVVNPTLVPTNLSIGQNVIFPIFCMCPNQTQLQNQVNY 184

Query: 188 MI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSP 247
           +I    QP+D L  +ASRFGVE   I D N    +PF+TIFIP+++LP L+QP+V +   
Sbjct: 185 LISYVFQPSDNLSLVASRFGVERQSIIDVNGNRTQPFDTIFIPLNKLPQLSQPVVAASVS 244

Query: 248 EQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 287
                   + R   + GLA+G+GI G LLI++ G WV   GK + KERE +E
Sbjct: 245 SGR-----KERKGLIAGLAVGLGISGILLILMSGFWVYREGKLKRKEREEDE 289

[Close]

BLAST of CmaCh14G017700.1 vs. TAIR10
Match: AT2G23770.1 (AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 87/271 (32.10%), Postives = 142/271 (52.40%), Query Frame = 1


Query: 35  GYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLS 94
           GY+C  N     CQAYV +R+  P F  + +I+ LF V    +S  ++ S S + FP  S
Sbjct: 45  GYSC--NGLNKTCQAYVIFRST-PSFSTVTSISSLFSVDPSLVSSLNDASPSTS-FP--S 104

Query: 95  GQPFFIPINCFC--NISYANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDL 154
           GQ   IP+ C C  + S +N++Y I   D+ + ++    Q L+T Q++   N  + +  L
Sbjct: 105 GQQVIIPLTCSCTGDDSQSNITYTIQPNDSYFAIANDTLQGLSTCQALAKQN-NVSSQSL 164

Query: 155 PIGVGVVFPIFCKCPTHTQ-SQNRVNFMIQPT----DTLPSIASRFGVETSDIADANRPN 214
             G+ +V PI C CPT  Q +++ V +++  T    DT+  I+ RFGVETS    AN  +
Sbjct: 165 FPGMRIVVPIRCACPTAKQINEDGVKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMS 224

Query: 215 PE-----PFETIFIPVSRLPNLTQPIVVSPSP----EQTPVPV-VEGR-NRAVTGLAIGI 274
            E     PF TI IP+   P  T  ++  P P      +P P+  +GR ++  T +    
Sbjct: 225 FENSEVFPFTTILIPLVNPPANTNSLIPPPPPPPPQSVSPPPLSPDGRKSKKKTWVYALA 284

Query: 275 GIVGFLLIV-VVGLWVCGVGKRRSKEREMEE 287
           G++G  L++ V+G  +  + K+++K +  EE
Sbjct: 285 GVLGGALVLSVIGAAIFCLSKKKTKTQTQEE 308

[Close]

BLAST of CmaCh14G017700.1 vs. NCBI nr
Match: gi|778678340|ref|XP_011650952.1| (PREDICTED: lysM domain receptor-like kinase 4 [Cucumis sativus])

HSP 1 Score: 436.4 bits (1121), Expect = 3.9e-119
Identity = 228/304 (75.00%), Postives = 245/304 (80.59%), Query Frame = 1


Query: 1   MEPPIRHTLTSSALFIF---FFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAA 60
           M  PIRH+  SS LF+F   FF FFFH SAA+ PDADGYTCS N TANPCQAYVFYRA  
Sbjct: 1   MYSPIRHS--SSILFLFSFFFFFFFFHYSAAEAPDADGYTCSANQTANPCQAYVFYRATP 60

Query: 61  PGFLDLATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISY 120
           P FL+LA IADLFWVSRLQISRPSNISDSNATFPLLSGQP FIPI C C+       ISY
Sbjct: 61  PNFLNLAAIADLFWVSRLQISRPSNISDSNATFPLLSGQPLFIPITCSCHSVNASVSISY 120

Query: 121 ANLSYKINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHT 180
           ANLSYKIN GDN W VST KFQNLTT+QSVE+ NPTL+A +L IGV VVFPIFCKCP  T
Sbjct: 121 ANLSYKINAGDNFWLVSTSKFQNLTTFQSVEIANPTLIATNLSIGVDVVFPIFCKCPNPT 180

Query: 181 QSQNRVNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQ 240
           Q +NRVNFMI    QP DTL SIASRFGV+TS+I DAN PNP+PFETIFIPVSRLPNLTQ
Sbjct: 181 QLRNRVNFMISYVIQPADTLSSIASRFGVQTSEIRDANWPNPQPFETIFIPVSRLPNLTQ 240

Query: 241 PIVVSPSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEE 291
           PIV+ PSPEQ P PV E +NR VTGLAIG+GIVGFLLI+ VGL V GVGKRR  EREMEE
Sbjct: 241 PIVLPPSPEQAPAPVREDKNRVVTGLAIGLGIVGFLLILAVGLLVFGVGKRRKNEREMEE 300

[Close]

BLAST of CmaCh14G017700.1 vs. NCBI nr
Match: gi|659076279|ref|XP_008438594.1| (PREDICTED: lysM domain receptor-like kinase 4 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 5.2e-116
Identity = 216/287 (75.26%), Postives = 232/287 (80.84%), Query Frame = 1


Query: 15  FIFFFIFFFHNSAAQPPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIADLFWVSR 74
           F FFF FFFH SAAQ PDADGYTCS N TANPCQAYVFYRA+ P FLDLA IADLFWVSR
Sbjct: 19  FFFFFFFFFHYSAAQAPDADGYTCSANQTANPCQAYVFYRASPPNFLDLAAIADLFWVSR 78

Query: 75  LQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYKINHGDNLWQVS 134
           L+ISRPSNISDSNATFPLL GQP FIPI C C+       ISYANLSYKIN GDN W VS
Sbjct: 79  LEISRPSNISDSNATFPLLPGQPLFIPITCSCHSVNASVSISYANLSYKINAGDNFWLVS 138

Query: 135 TFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFM----IQPT 194
           T KFQNLTT+QSVE+ NPTL+  +L IGV VVFPIFCKCP  TQ QNR+NFM    IQP 
Sbjct: 139 TSKFQNLTTFQSVEIANPTLIPTNLDIGVNVVFPIFCKCPNPTQLQNRINFMVSYVIQPA 198

Query: 195 DTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQTPVPVVE 254
           DT+ SIASRFGV+ S+I  AN PNP+PFETIFIPVS LPNLTQPIV+ PSPEQ P PV E
Sbjct: 199 DTMSSIASRFGVQASEIRAANWPNPQPFETIFIPVSHLPNLTQPIVLPPSPEQAPAPVRE 258

Query: 255 GRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVGKRRSKEREMEEGVEK 291
            +NRAVTGLAI +GIVGFLLI+ VGLWV GVGKRR  EREMEE  EK
Sbjct: 259 VKNRAVTGLAIALGIVGFLLILAVGLWVVGVGKRRKNEREMEERFEK 305

[Close]

BLAST of CmaCh14G017700.1 vs. NCBI nr
Match: gi|1009119721|ref|XP_015876533.1| (PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba])

HSP 1 Score: 295.8 bits (756), Expect = 8.2e-77
Identity = 160/279 (57.35%), Postives = 191/279 (68.46%), Query Frame = 1


Query: 7   HTLTSSALFIFFFIFFFHNSAAQP-PDADGYTCSTNHTAN--PCQAYVFYRAAAPGFLDL 66
           H  +S  LF FFFIFF  +S AQP P  DGYTCS N T N  PCQ YVFYRA AP +LDL
Sbjct: 6   HYDSSLLLFFFFFIFFVFHSKAQPLPTTDGYTCSANQTTNSFPCQTYVFYRAMAPDYLDL 65

Query: 67  ATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYK 126
           A+I DLF VSRL IS PSNIS  ++  PL+  Q  F+PI C CN       ISYAN+SY 
Sbjct: 66  ASIGDLFSVSRLMISEPSNISSPSS--PLVPNQSLFVPITCSCNSLNTSETISYANISYT 125

Query: 127 INHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRV 186
           I  GD  + +ST KFQNLTTYQSVEVVNP LVA +L +GV V+FPIFCKCP  TQ QNRV
Sbjct: 126 ITPGDTFYDISTKKFQNLTTYQSVEVVNPELVATNLTVGVNVIFPIFCKCPNQTQLQNRV 185

Query: 187 NFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSP 246
           N+++    QP+D + ++ASRFGVETS I D N  N + ++TIF+PV++LP L QP VV  
Sbjct: 186 NYLVSYVLQPSDNISTVASRFGVETSSIIDVNGNNSQTWDTIFVPVAQLPELAQPTVVPS 245

Query: 247 SPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWV 272
           SP        + R   VTGLAIG+GI G LL++V G WV
Sbjct: 246 SPPGNN----DDREGVVTGLAIGLGITGVLLLLVSGFWV 278

[Close]

BLAST of CmaCh14G017700.1 vs. NCBI nr
Match: gi|1009174665|ref|XP_015868460.1| (PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba])

HSP 1 Score: 293.1 bits (749), Expect = 5.3e-76
Identity = 161/280 (57.50%), Postives = 192/280 (68.57%), Query Frame = 1


Query: 7   HTLTSSALFIFFF-IFFFHNSAAQP-PDADGYTCSTNHTAN--PCQAYVFYRAAAPGFLD 66
           H  +S  LF+FFF IFF  +S AQP P  DGYTCS N T N  PCQ YVFYRA AP FLD
Sbjct: 6   HYDSSLLLFLFFFFIFFVFHSKAQPLPTTDGYTCSANQTTNSFPCQTYVFYRAMAPDFLD 65

Query: 67  LATIADLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSY 126
           LA+I DLF VSRL IS PSNIS  ++  PL+  Q  F+PI C CN       ISYAN+SY
Sbjct: 66  LASIGDLFSVSRLMISEPSNISSPSS--PLVPNQSLFVPITCSCNSLNTSETISYANISY 125

Query: 127 KINHGDNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNR 186
            I  GD  + +ST KFQNLTTYQSVEVVNP LVA +L +GV V+FPIFCKCP  TQ QNR
Sbjct: 126 TITPGDTFYDISTKKFQNLTTYQSVEVVNPELVATNLTVGVNVIFPIFCKCPNQTQLQNR 185

Query: 187 VNFMI----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVS 246
           VN+++    QP+D + ++ASRFGVETS I D N  N + ++TIF+PV++LP L QP VV 
Sbjct: 186 VNYLVSYVLQPSDNISTVASRFGVETSSIIDVNGNNSQTWDTIFVPVAQLPELAQPTVVP 245

Query: 247 PSPEQTPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWV 272
            SP        + R   VTGLAIG+GI G LL++V G WV
Sbjct: 246 SSPPGNN----DDREGVVTGLAIGLGITGVLLLLVSGFWV 279

[Close]

BLAST of CmaCh14G017700.1 vs. NCBI nr
Match: gi|470104040|ref|XP_004288425.1| (PREDICTED: lysM domain receptor-like kinase 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 290.0 bits (741), Expect = 4.5e-75
Identity = 161/285 (56.49%), Postives = 201/285 (70.53%), Query Frame = 1


Query: 12  SALFIFFFIFF---FHNSAAQ-PPDADGYTCSTNHTANPCQAYVFYRAAAPGFLDLATIA 71
           S+LF+FFF+ F    H S AQ  P ADGYTCS N T NPCQAY +YRA AP F+DLA+IA
Sbjct: 10  SSLFLFFFLCFHLVLHLSEAQIGPPADGYTCSANETTNPCQAYAYYRAMAPNFIDLASIA 69

Query: 72  DLFWVSRLQISRPSNISDSNATFPLLSGQPFFIPINCFCN-------ISYANLSYKINHG 131
           DLF VSRL IS+PSNIS  + T PL+  QP F+P++C C        IS+ANLS+ I  G
Sbjct: 70  DLFSVSRLMISKPSNIS--SPTSPLIQDQPLFVPLSCSCKSVNSSTAISFANLSHTIIQG 129

Query: 132 DNLWQVSTFKFQNLTTYQSVEVVNPTLVAVDLPIGVGVVFPIFCKCPTHTQSQNRVNFMI 191
           D  + +ST  FQNLTTYQSVE+VNPTLVA +L IGV   FPIFCKCP  TQ QN+VN+++
Sbjct: 130 DTFYHLSTQTFQNLTTYQSVELVNPTLVATNLTIGVTAYFPIFCKCPNKTQLQNKVNYLV 189

Query: 192 ----QPTDTLPSIASRFGVETSDIADANRPNPEPFETIFIPVSRLPNLTQPIVVSPSPEQ 251
               QP+D   ++ASRFGV+T  I + N  N +PF+TIFIPV++LP L+QP  VSPSP  
Sbjct: 190 SYVFQPSDNFSTVASRFGVQTKSIVEVNGNNTQPFDTIFIPVTQLPVLSQP-TVSPSP-- 249

Query: 252 TPVPVVEGRNRAVTGLAIGIGIVGFLLIVVVGLWVCGVG--KRRS 280
            P  +   R   +TGLA+G+GI GF+LI+VVG+ V G G  K+RS
Sbjct: 250 -PPGIKTERKGVITGLAVGLGITGFMLILVVGVLVFGGGLVKKRS 288

The following BLAST results are available for this feature:

BLAST of CmaCh14G017700.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFP_MEDTR	8.8e-31	31.99	Serine/threonine receptor-like kinase NFP OS=Medicago truncatula GN=NFP PE=1 SV=...	[more]
LYK4_ARATH	1.8e-20	32.10	LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4 PE=1 SV=1	[more]

BLAST of CmaCh14G017700.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA24_CUCSA	2.7e-119	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144110 PE=4 SV=1	[more]
A0A067ESN2_CITSI	2.2e-73	51.19	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037224mg PE=4 SV=1	[more]
B9RTG0_RICCO	8.5e-73	52.07	Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCO...	[more]
F6HDX0_VITVI	6.1e-71	52.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04610 PE=4 SV=...	[more]
A0A067KZA2_JATCU	2.3e-70	50.68	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02266 PE=4 SV=1	[more]

BLAST of CmaCh14G017700.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23770.1	1.0e-21	32.10	protein kinase family protein / peptidoglycan-binding LysM domain-co...	[more]

BLAST of CmaCh14G017700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778678340\|ref\|XP_011650952.1\|	3.9e-119	75.00	PREDICTED: lysM domain receptor-like kinase 4 [Cucumis sativus]	[more]
gi\|659076279\|ref\|XP_008438594.1\|	5.2e-116	75.26	PREDICTED: lysM domain receptor-like kinase 4 [Cucumis melo]	[more]
gi\|1009119721\|ref\|XP_015876533.1\|	8.2e-77	57.35	PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba]	[more]
gi\|1009174665\|ref\|XP_015868460.1\|	5.3e-76	57.50	PREDICTED: lysM domain receptor-like kinase 4 [Ziziphus jujuba]	[more]
gi\|470104040\|ref\|XP_004288425.1\|	4.5e-75	56.49	PREDICTED: lysM domain receptor-like kinase 4 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR018392	LysM_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G017700	CmaCh14G017700	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G017700.1	CmaCh14G017700.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G017700.1.exon.1	CmaCh14G017700.1.exon.1	exon
CmaCh14G017700.1.exon.2	CmaCh14G017700.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G017700.1.CDS.1	CmaCh14G017700.1.CDS.1	CDS
CmaCh14G017700.1.CDS.2	CmaCh14G017700.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	GENE3D	G3DSA:3.10.350.10		coord: 180..205 score: 2.
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 180..205 score: 3.
None	No IPR available	PANTHER	PTHR33734	FAMILY NOT NAMED	coord: 5..230 score: 8.0
None	No IPR available	PANTHER	PTHR33734:SF6	SUBFAMILY NOT NAMED	coord: 5..230 score: 8.0