Cp4.1LG08g03790 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCAGTAACATCTCCGACTCCAACGCTACCTTCCCCCTCGTCTCCGGCCAACCCCTCTTCATCCCCATCACCTGCTCCTGCAACTCCGTCAACGCCTCTGTCAGCATCTCGTACGCCAATCTCTCCTACAAAATCAACGCCGGCGACAGCTTCTGGCTCGTCTCCACCTCCAAGTTCCAGAATCTTACCACGTTTCAATCCGTCGAAGTCGTTAACCCCACTTTAGTCCCCACCAATCTCTCCATCGGCGCCGACGTCGTTTTCCCCATCTTCTGCAAGTGCCCTAACTCCACCCAATTCCAAAACCGCGTCAATTTCATGGTCTCTTACGTTATCCACCCACAGGACACTCTGTTTTCCATCGCTTCAAGGTTCGGAGTACCAACATCGGAAATCACCGCCGCGAACCGCCCCAATCCGAAAGCGTTCGACACAATCTTCATCCCGGTAAGTCGTCTCCCGAATTTGACGCAACCCATTATTCTTCCACCGCCGCCAGAGCAGCCGCCGGCTCCGGTGAGAGAGGGAAAAAACAGGGCAGTAACAGGGCTGGCGATTGGGATGGGGATTGCTGGGTTTTTACTGATTTTAATGGTGGGTTTGTGGGTGTGTGGAGTGGGAAAGCGGCGGAGAAGTGAGAGGGAAATGAAGGAGGGAATTGAGAGGCAGAAATTGCAGGAAGTGGGGATTTGGAAGGGAAAGGGGAAAGAAATGGAGATGGATTTAATGGCGGATGTGTCGGATTGTTTGGATAAATACAGAGTGTTCAAGATCGAGGAGCTGAATGAAGCAACAAATGGGTTTCATGAGAGGAGCTTGATTCAAGGATCGGTTTACAAAGGGAGTATCAATGGAGTTGAGTATGCTATCAAGAAGATGAAGTGGAACGCCTATGAACAGCTCAAGATCTTGCAGAAGGTAACATTTTTTTTTATATTTAATATATTTACAATTTCCGAATATTACTTTTGATATTATAACTCAAATTATTGATTTGCATTAATTTTCTTTAATGAAAATTTGGAGGCTAGTGGGGTTATTTATTTATTCATTATTAAGATAAACCACTTGTATATGAATTAACTCATGGTTTGAAAAAGTGTATAAGTTGAGGGTTAAAATGGGAATTTACATAGTCCATAATTGAATGATTATTAAAAAATAAAAAAAAATTAGGGATGAAATGCAGATAATTATTTTCAAAATTTTTATATTAATTTTTGAAAATTTATGAGTATTTTTGAAACGTGATATTAGAGTAAATTTTTTTTTTTTTTTTTTTTTTTGAAAAGGTAAAAGATAGTAACCTAACTTAGGACTAATGACTCGTTGAATGTGAAAAGGAAGAACCATAGGAACGTTTTTCAAACCGATTGTTTCAAAAGTTTTTTTTAAAATAATTTTCAAAAAGCTACTTGGAAAATGAAGACGATGGCTTTCATTAAAATATTGGAAGTCGGTATGGAATGAGACCATGAAAAAGACGAAAATAGCCTTGAGTGCTTTCGTTTTCTCGCTTCCTTTTCTAGTTGACACCGCTTCGATAAATATAAATATATATATATACAAACATTTCCTTTTCTTGAGGTTGAAAGTTCGGTTTATAGACTAATATTATACATGTTTAATTTGATTTTAAGGTGAACCATGGTAATCTAGTGAAGCTCGAAGGTTTTTGCGTTGACCCCGATGATGCAACATGCTACTTAATTTATGAATATGTAGAGAACGGTTCTCTACATTCATGGCTACACGGAAGCCAAAAGCAGAAGTTGAACTGGAGAACGAGATTGAGGATTGCGATTGATGTTGCTAATGGACTACTCTATGTTCACGAGCACACGAGGCCACGAGTTGTCCACAAAGACATTAAAAGTAGCAACATTTTGTTGGATGCAAGCATGAGAGCTAAGATAGCCAACTTTGGACTCGCGAAGTCAGGGTGCAATGCTATAACCATGCACATTGTTGGAACTCAAGGCTATATAGCACCCGAGTACATAGCAGATGGAGTCGTGTCGACAAAGATGGATATCTTTGCGTTTGGAGTTGTTTTGCTCGAGCTCGTCTCTGGTAAGGAGGCCATTGATGAGGAAGGAAGGGTTCTATGGATGCGAGCGAGTGGGTTTTCGGAAGGGAAAGAGAAGGAGAAGTTAGACAGATTGAAGAATTGGATTGATGAAGCTCTTTTCGAGCAATCGTGCCCGATGGAGAGCGTGATGGATGTAATGAATGTGGCTGTTAGTTGCCTGCAAAAGGACCCGACGAAGAGGCCGAGCATGGTCGAGGTGGTTTATGCACTGAGCAAGAGCGACGACGCCGTGTTCGACTTCTCCGATGATACTCTATCAGCACCTATCTTAACAGCTAGG CCCAGTAACATCTCCGACTCCAACGCTACCTTCCCCCTCGTCTCCGGCCAACCCCTCTTCATCCCCATCACCTGCTCCTGCAACTCCGTCAACGCCTCTGTCAGCATCTCGTACGCCAATCTCTCCTACAAAATCAACGCCGGCGACAGCTTCTGGCTCGTCTCCACCTCCAAGTTCCAGAATCTTACCACGTTTCAATCCGTCGAAGTCGTTAACCCCACTTTAGTCCCCACCAATCTCTCCATCGGCGCCGACGTCGTTTTCCCCATCTTCTGCAAGTGCCCTAACTCCACCCAATTCCAAAACCGCGTCAATTTCATGGTCTCTTACGTTATCCACCCACAGGACACTCTGTTTTCCATCGCTTCAAGGTTCGGAGTACCAACATCGGAAATCACCGCCGCGAACCGCCCCAATCCGAAAGCGTTCGACACAATCTTCATCCCGGTAAGTCGTCTCCCGAATTTGACGCAACCCATTATTCTTCCACCGCCGCCAGAGCAGCCGCCGGCTCCGGTGAGAGAGGGAAAAAACAGGGCAGTAACAGGGCTGGCGATTGGGATGGGGATTGCTGGGTTTTTACTGATTTTAATGGTGGGTTTGTGGGTGTGTGGAGTGGGAAAGCGGCGGAGAAGTGAGAGGGAAATGAAGGAGGGAATTGAGAGGCAGAAATTGCAGGAAGTGGGGATTTGGAAGGGAAAGGGGAAAGAAATGGAGATGGATTTAATGGCGGATGTGTCGGATTGTTTGGATAAATACAGAGTGTTCAAGATCGAGGAGCTGAATGAAGCAACAAATGGGTTTCATGAGAGGAGCTTGATTCAAGGATCGGTTTACAAAGGGAGTATCAATGGAGTTGAGTATGCTATCAAGAAGATGAAGTGGAACGCCTATGAACAGCTCAAGATCTTGCAGAAGGTGAACCATGGTAATCTAGTGAAGCTCGAAGATGGAGTCGTGTCGACAAAGATGGATATCTTTGCGTTTGGAGTTGTTTTGCTCGAGCTCGTCTCTGGTAAGGAGGCCATTGATGAGGAAGGAAGGGTTCTATGGATGCGAGCGAGTGGGTTTTCGGAAGGGAAAGAGAAGGAGAAGTTAGACAGATTGAAGAATTGGATTGATGAAGCTCTTTTCGAGCAATCGTGCCCGATGGAGAGCGTGATGGATGTAATGAATGTGGCTGTTAGTTGCCTGCAAAAGGACCCGACGAAGAGGCCGAGCATGGTCGAGGTGGTTTATGCACTGAGCAAGAGCGACGACGCCGTGTTCGACTTCTCCGATGATACTCTATCAGCACCTATCTTAACAGCTAGG ATGGTCTCTTACGTTATCCACCCACAGGACACTCTGTTTTCCATCGCTTCAAGGTTCGGAGTACCAACATCGGAAATCACCGCCGCGAACCGCCCCAATCCGAAAGCGTTCGACACAATCTTCATCCCGGTAAGTCGTCTCCCGAATTTGACGCAACCCATTATTCTTCCACCGCCGCCAGAGCAGCCGCCGGCTCCGGTGAGAGAGGGAAAAAACAGGGCAGTAACAGGGCTGGCGATTGGGATGGGGATTGCTGGGTTTTTACTGATTTTAATGGTGGGTTTGTGGGTGTGTGGAGTGGGAAAGCGGCGGAGAAGTGAGAGGGAAATGAAGGAGGGAATTGAGAGGCAGAAATTGCAGGAAGTGGGGATTTGGAAGGGAAAGGGGAAAGAAATGGAGATGGATTTAATGGCGGATGTGTCGGATTGTTTGGATAAATACAGAGTGTTCAAGATCGAGGAGCTGAATGAAGCAACAAATGGGTTTCATGAGAGGAGCTTGATTCAAGGATCGGTTTACAAAGGGAGTATCAATGGAGTTGAGTATGCTATCAAGAAGATGAAGTGGAACGCCTATGAACAGCTCAAGATCTTGCAGAAGGTGAACCATGGTAATCTAGTGAAGCTCGAAGATGGAGTCGTGTCGACAAAGATGGATATCTTTGCGTTTGGAGTTGTTTTGCTCGAGCTCGTCTCTGGTAAGGAGGCCATTGATGAGGAAGGAAGGGTTCTATGGATGCGAGCGAGTGGGTTTTCGGAAGGGAAAGAGAAGGAGAAGTTAGACAGATTGAAGAATTGGATTGATGAAGCTCTTTTCGAGCAATCGTGCCCGATGGAGAGCGTGATGGATGTAATGAATGTGGCTGTTAGTTGCCTGCAAAAGGACCCGACGAAGAGGCCGAGCATGGTCGAGGTGGTTTATGCACTGAGCAAGAGCGACGACGCCGTGTTCGACTTCTCCGATGATACTCTATCAGCACCTATCTTAACAGCTAGG MVSYVIHPQDTLFSIASRFGVPTSEITAANRPNPKAFDTIFIPVSRLPNLTQPIILPPPPEQPPAPVREGKNRAVTGLAIGMGIAGFLLILMVGLWVCGVGKRRRSEREMKEGIERQKLQEVGIWKGKGKEMEMDLMADVSDCLDKYRVFKIEELNEATNGFHERSLIQGSVYKGSINGVEYAIKKMKWNAYEQLKILQKVNHGNLVKLEDGVVSTKMDIFAFGVVLLELVSGKEAIDEEGRVLWMRASGFSEGKEKEKLDRLKNWIDEALFEQSCPMESVMDVMNVAVSCLQKDPTKRPSMVEVVYALSKSDDAVFDFSDDTLSAPILTAR
BLAST of Cp4.1LG08g03790 vs. Swiss-Prot
Match: LYK4_ARATH (LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16 Identity = 69/223 (30.94%), Postives = 112/223 (50.22%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. Swiss-Prot
Match: NFP_MEDTR (Serine/threonine receptor-like kinase NFP OS=Medicago truncatula GN=NFP PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.2e-16 Identity = 67/211 (31.75%), Postives = 101/211 (47.87%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. Swiss-Prot
Match: LYK5_ARATH (Protein LYK5 OS=Arabidopsis thaliana GN=LYK5 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.8e-11 Identity = 58/228 (25.44%), Postives = 111/228 (48.68%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. Swiss-Prot
Match: Y1332_ARATH (Probable receptor-like protein kinase At1g33260 OS=Arabidopsis thaliana GN=At1g33260 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 8.3e-09 Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. Swiss-Prot
Match: Y4230_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3) HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TrEMBL
Match: A0A0A0LA24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144110 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 5.7e-89 Identity = 171/210 (81.43%), Postives = 186/210 (88.57%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TrEMBL
Match: B9RTG0_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0909430 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.3e-56 Identity = 123/212 (58.02%), Postives = 152/212 (71.70%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TrEMBL
Match: A0A067KZA2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02266 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 5.9e-54 Identity = 122/217 (56.22%), Postives = 149/217 (68.66%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TrEMBL
Match: B9HKD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s16050g PE=4 SV=2) HSP 1 Score: 218.8 bits (556), Expect = 1.0e-53 Identity = 120/212 (56.60%), Postives = 152/212 (71.70%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TrEMBL
Match: K4CVU7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 8.5e-53 Identity = 120/223 (53.81%), Postives = 156/223 (69.96%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TAIR10
Match: AT2G23770.1 (AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein) HSP 1 Score: 86.3 bits (212), Expect = 4.0e-17 Identity = 69/223 (30.94%), Postives = 112/223 (50.22%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TAIR10
Match: AT2G33580.1 (AT2G33580.1 Protein kinase superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 3.8e-12 Identity = 58/228 (25.44%), Postives = 111/228 (48.68%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TAIR10
Match: AT1G33260.1 (AT1G33260.1 Protein kinase superfamily protein) HSP 1 Score: 62.8 bits (151), Expect = 4.7e-10 Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TAIR10
Match: AT4G03230.1 (AT4G03230.1 S-locus lectin protein kinase family protein) HSP 1 Score: 62.0 bits (149), Expect = 8.0e-10 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. TAIR10
Match: AT4G10390.1 (AT4G10390.1 Protein kinase superfamily protein) HSP 1 Score: 59.3 bits (142), Expect = 5.2e-09 Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. NCBI nr
Match: gi|659076279|ref|XP_008438594.1| (PREDICTED: lysM domain receptor-like kinase 4 [Cucumis melo]) HSP 1 Score: 339.7 bits (870), Expect = 5.6e-90 Identity = 171/210 (81.43%), Postives = 188/210 (89.52%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. NCBI nr
Match: gi|778678340|ref|XP_011650952.1| (PREDICTED: lysM domain receptor-like kinase 4 [Cucumis sativus]) HSP 1 Score: 335.9 bits (860), Expect = 8.1e-89 Identity = 171/210 (81.43%), Postives = 186/210 (88.57%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. NCBI nr
Match: gi|255551969|ref|XP_002517029.1| (PREDICTED: lysM domain receptor-like kinase 4 [Ricinus communis]) HSP 1 Score: 228.4 bits (581), Expect = 1.8e-56 Identity = 123/212 (58.02%), Postives = 152/212 (71.70%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. NCBI nr
Match: gi|802581501|ref|XP_012069750.1| (PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]) HSP 1 Score: 219.5 bits (558), Expect = 8.5e-54 Identity = 122/217 (56.22%), Postives = 149/217 (68.66%), Query Frame = 1
BLAST of Cp4.1LG08g03790 vs. NCBI nr
Match: gi|566184241|ref|XP_002311653.2| (hypothetical protein POPTR_0008s16050g [Populus trichocarpa]) HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53 Identity = 120/212 (56.60%), Postives = 152/212 (71.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |