CmaCh14G015310 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGAAGCTCAAGCCATTCAAGCCTCAACCTCGTCCTCGGCCTTCTATATCTATTGATTTTTACTAACGTCGTCGTTGTCGTCGCAGTCGATAGCTCAATAAGCCTGTGCAATGGTTCGATAGCGGAGTGCTATAAAGAGGTTGAGACGTTGATGGAGTCGGAGATAACTCGGAGGTTTCTTGGACAAGTTAATGAATTAACCTATAAATTTTTGGATAAAGACAAAGCACCTTGTGCTAATGGTAGAGGTAAACCTTACTTTGTAAAGTGTCAGCCTCGTGAAGCTAATCATTATGACAGGAGATGCAGCGGAACGTATAATCGATGTAAATTTTCATAG ATGGAAGGAAGCTCAAGCCATTCAAGCCTCAACCTCGTCCTCGGCCTTCTATATCTATTGATTTTTACTAACGTCGTCGTTGTCGTCGCAGTCGATAGCTCAATAAGCCTGTGCAATGGTTCGATAGCGGAGTGCTATAAAGAGGTTGAGACGTTGATGGAGTCGGAGATAACTCGGAGGTTTCTTGGACAAGTTAATGAATTAACCTATAAATTTTTGGATAAAGACAAAGCACCTTGTGCTAATGGTAGAGGTAAACCTTACTTTGTAAAGTGTCAGCCTCGTGAAGCTAATCATTATGACAGGAGATGCAGCGGAACGTATAATCGATGTAAATTTTCATAG ATGGAAGGAAGCTCAAGCCATTCAAGCCTCAACCTCGTCCTCGGCCTTCTATATCTATTGATTTTTACTAACGTCGTCGTTGTCGTCGCAGTCGATAGCTCAATAAGCCTGTGCAATGGTTCGATAGCGGAGTGCTATAAAGAGGTTGAGACGTTGATGGAGTCGGAGATAACTCGGAGGTTTCTTGGACAAGTTAATGAATTAACCTATAAATTTTTGGATAAAGACAAAGCACCTTGTGCTAATGGTAGAGGTAAACCTTACTTTGTAAAGTGTCAGCCTCGTGAAGCTAATCATTATGACAGGAGATGCAGCGGAACGTATAATCGATGTAAATTTTCATAG MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDSSISLCNGSIAECYKEVETLMESEITRRFLGQVNELTYKFLDKDKAPCANGRGKPYFVKCQPREANHYDRRCSGTYNRCKFS
BLAST of CmaCh14G015310 vs. Swiss-Prot
Match: RLF32_ARATH (Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 1
BLAST of CmaCh14G015310 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 1
BLAST of CmaCh14G015310 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TrEMBL
Match: A0A0A0L624_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171850 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-08 Identity = 44/97 (45.36%), Postives = 53/97 (54.64%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TrEMBL
Match: B7FMN1_MEDTR (RALF OS=Medicago truncatula GN=MTR_8g083150 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-08 Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TrEMBL
Match: A0A072TUW6_MEDTR (RALF OS=Medicago truncatula GN=MTR_8g083150 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-08 Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TrEMBL
Match: A0A0A0L9A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171840 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.4e-08 Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TrEMBL
Match: A0A151SJC7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_001065 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07 Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TAIR10
Match: AT4G14010.1 (AT4G14010.1 ralf-like 32) HSP 1 Score: 57.4 bits (137), Expect = 6.7e-09 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1) HSP 1 Score: 53.9 bits (128), Expect = 7.5e-08 Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 1
BLAST of CmaCh14G015310 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22) HSP 1 Score: 53.9 bits (128), Expect = 7.5e-08 Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 1
BLAST of CmaCh14G015310 vs. NCBI nr
Match: gi|720097363|ref|XP_010247297.1| (PREDICTED: protein RALF-like 32 [Nelumbo nucifera]) HSP 1 Score: 80.5 bits (197), Expect = 2.1e-12 Identity = 51/116 (43.97%), Postives = 66/116 (56.90%), Query Frame = 1
BLAST of CmaCh14G015310 vs. NCBI nr
Match: gi|720097359|ref|XP_010247296.1| (PREDICTED: protein RALF-like 32 [Nelumbo nucifera]) HSP 1 Score: 75.1 bits (183), Expect = 8.9e-11 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 1
BLAST of CmaCh14G015310 vs. NCBI nr
Match: gi|1012104675|ref|XP_015958329.1| (PREDICTED: protein RALF-like 32 [Arachis duranensis]) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-08 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 1
BLAST of CmaCh14G015310 vs. NCBI nr
Match: gi|697128698|ref|XP_009618400.1| (PREDICTED: protein RALF-like 32 [Nicotiana tomentosiformis]) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-08 Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 1
BLAST of CmaCh14G015310 vs. NCBI nr
Match: gi|700202095|gb|KGN57228.1| (hypothetical protein Csa_3G171850 [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 3.2e-08 Identity = 44/97 (45.36%), Postives = 53/97 (54.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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