CmaCh14G013700 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G013700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr14 : 10632092 .. 10632994 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAAACCAAAAACGCCCTCTTGGGCATGGATTGGAAGTAGATGATTCACGCCATGAGAAGGCTTTAAGAGCATTTGATCAAAATGGGGTTACGAGAAACTCATCAAAAGACGGTCCCAGTTGGAGAGTTGAACCTTGTGAAGTTGAGAAGATCAGTAGAAGACTGAGCCTTCTTGAAGAAGATACTAGAGCTATGAAGAAAGCTTTGTTTGAGAGTTTGGAGGAAAGAAGAAATCTGGTGTATGAGATAAACCAGCAATTTCAGAGCATAAGCAAACACCATCAACTCTGTAACGAGGTAGCTGAAGATCATGATGAGACACTCCAACTCCCTGAGGTAAAATGCTTCGAATCTTCTGATATACTTCAAATTTCTTGAATTCATACTTCGAATGGAATATAGATTGTCTGAACATTGTTTGCAGAACAAAGAGAGCTTGTTTTTGTTTTGTTTTACATGAATTCCATAGCCTCGCTGTGGATGAAAGAATAGGATTAGGAACTGAAATTCATAGATACACGTTAAGGTTTGCATCATTTTGTGGCATTACTTAAAGCCCTCAGCTCCCATATGACTGATCGATCTTATGTGGTGTGGTGTGGATTTTGGTGGAGAAAACAGGAATGGAGACGTGGTGCTGGCCTATCACAAATCTTTCACCACCAACCAAATATATCTCTCGTCTTCAAACATTTCAAACCAAATTTGTTGGCATTCTCTGATTATCTTCCAAGAGAAAAATGATCTATTTGGAGAGACTCAAGAATGTAAGTATTGGGAGTTCGTACTTTAACCAATTGAGCTATATTTATATGGGCTATTAGAGAAATGAATTCTTCATATTTGATATCATTTTATTTGGCTTGTGATGTTCAAAGATTCTAATTCTGATTCGAG

mRNA sequence

ATGGCAGAAAACCAAAAACGCCCTCTTGGGCATGGATTGGAAGTAGATGATTCACGCCATGAGAAGGCTTTAAGAGCATTTGATCAAAATGGGGTTACGAGAAACTCATCAAAAGACGGTCCCAGTTGGAGAGTTGAACCTTGTGAAGTTGAGAAGATCAGTAGAAGACTGAGCCTTCTTGAAGAAGATACTAGAGCTATGAAGAAAGCTTTGTTTGAGAGTTTGGAGGAAAGAAGAAATCTGGTGTATGAGATAAACCAGCAATTTCAGAGCATAAGCAAACACCATCAACTCTGTAACGAGGTAGCTGAAGATCATGATGAGACACTCCAACTCCCTGAGGAATGGAGACGTGGTGCTGGCCTATCACAAATCTTTCACCACCAACCAAATATATCTCTCGTCTTCAAACATTTCAAACCAAATTTGTTGGCATTCTCTGATTATCTTCCAAGAGAAAAATGATCTATTTGGAGAGACTCAAGAATGTAAGTATTGGGAGTTCGTACTTTAACCAATTGAGCTATATTTATATGGGCTATTAGAGAAATGAATTCTTCATATTTGATATCATTTTATTTGGCTTGTGATGTTCAAAGATTCTAATTCTGATTCGAG

Coding sequence (CDS)

ATGGCAGAAAACCAAAAACGCCCTCTTGGGCATGGATTGGAAGTAGATGATTCACGCCATGAGAAGGCTTTAAGAGCATTTGATCAAAATGGGGTTACGAGAAACTCATCAAAAGACGGTCCCAGTTGGAGAGTTGAACCTTGTGAAGTTGAGAAGATCAGTAGAAGACTGAGCCTTCTTGAAGAAGATACTAGAGCTATGAAGAAAGCTTTGTTTGAGAGTTTGGAGGAAAGAAGAAATCTGGTGTATGAGATAAACCAGCAATTTCAGAGCATAAGCAAACACCATCAACTCTGTAACGAGGTAGCTGAAGATCATGATGAGACACTCCAACTCCCTGAGGAATGGAGACGTGGTGCTGGCCTATCACAAATCTTTCACCACCAACCAAATATATCTCTCGTCTTCAAACATTTCAAACCAAATTTGTTGGCATTCTCTGATTATCTTCCAAGAGAAAAATGA

Protein sequence

MAENQKRPLGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVAEDHDETLQLPEEWRRGAGLSQIFHHQPNISLVFKHFKPNLLAFSDYLPREK

Homology

[Close]

BLAST of CmaCh14G013700 vs. TrEMBL
Match: A0A0A0KVL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006360 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-35
Identity = 84/121 (69.42%), Postives = 93/121 (76.86%), Query Frame = 1


Query: 1   MAENQKRPLGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLL 60
           MAE+QKR  GHG E D S HE  LR FD+NGV +NSSKDG +  V+ CEVEKI RRLS+L
Sbjct: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60

Query: 61  EEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA-------EDHDETLQLP 115
           EEDTRAMKKALF+SLEERRNLVYEINQQFQ I+K H L NEVA       EDHDETL  P
Sbjct: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120

[Close]

BLAST of CmaCh14G013700 vs. TrEMBL
Match: F6HXL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08110 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-09
Identity = 48/147 (32.65%), Postives = 75/147 (51.02%), Query Frame = 1


Query: 6   KRPLGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLLEEDTR 65
           K+PLGH      S++ K +  F                     EVE++++RL +LEED  
Sbjct: 24  KQPLGHSEVQAWSKYHKGMVVFQAG------------------EVEQLNKRLQILEEDAA 83

Query: 66  AMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVAEDHDET------LQLPEEWRRG 125
            +K++ F S+EER+ L+ EI+Q FQ I  HH LC +     ++T      +   ++ R G
Sbjct: 84  VIKQSFFSSVEERKKLIREIHQLFQII--HHFLCLQSQGTGEKTHAGALIINPHKDGRMG 143

Query: 126 AGLSQIFHHQPNISLVFKHFKPNLLAF 147
            GLSQ+     N +LV +  + N+LAF
Sbjct: 144 TGLSQVLIQDSNPALVTRGLRANMLAF 150

[Close]

BLAST of CmaCh14G013700 vs. TrEMBL
Match: V4S052_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026559mg PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-06
Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 1


Query: 50  VEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA--EDHD 109
           VE+++ RL+ LE +  AMK+A  E+LEER  LV EI + FQ + + H+L N+V   +  D
Sbjct: 84  VEELNERLNSLEVENEAMKQAFIETLEERNKLVQEIYRDFQKLHQRHRLGNQVTGLKIWD 143

Query: 110 ETLQLPEEWR--RGAGLSQIFHHQPNISLVFKHFKPNL 144
           E++ +   +    G+GLSQ+   + N  +V +    NL
Sbjct: 144 ESIIVNSSYEAVMGSGLSQVLFEESNPCIVTRDHSANL 181

[Close]

BLAST of CmaCh14G013700 vs. TrEMBL
Match: A0A067E0L0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029773mg PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-06
Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 1


Query: 50  VEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA--EDHD 109
           VE+++ RL+ LE +  AMK+A  E+LEER  LV EI + FQ + + H+L N+V   +  D
Sbjct: 84  VEELNERLNSLEVENEAMKQAFIETLEERNKLVQEIYRDFQKLHQRHRLGNQVTGLKIWD 143

Query: 110 ETLQLPEEWR--RGAGLSQIFHHQPNISLVFKHFKPNL 144
           E++ +   +    G+GLSQ+   + N  +V +    NL
Sbjct: 144 ESIIVNSSYEAVMGSGLSQVLFEESNPCIVTRDHSANL 181

[Close]

BLAST of CmaCh14G013700 vs. TrEMBL
Match: W9R3P4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025726 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.7e-06
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 49  EVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVAEDHDE 108
           EVE++S RL +LEE+T+ +K+A+F SLEER++++ EI +QFQ +  + Q  N +      
Sbjct: 37  EVEELSERLKILEEETQIIKEAVFWSLEERKSMMNEICKQFQLLQGYLQPKNHLVIKESF 96

Query: 109 TLQLPEEWRRGAGLSQIFHHQPNISLVFKHFKPNLLAFSDY 150
            +   E+ R    L  I    P   L+ K  K N LAF ++
Sbjct: 97  YVNPFEDGRFRKSLPNIQIPDPKPCLLTKELKANALAFQEH 137

[Close]

BLAST of CmaCh14G013700 vs. NCBI nr
Match: gi|778689642|ref|XP_011652992.1| (PREDICTED: uncharacterized protein LOC105435163 isoform X1 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-53
Identity = 111/155 (71.61%), Postives = 123/155 (79.35%), Query Frame = 1


Query: 1   MAENQKRPLGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLL 60
           MAE+QKR  GHG E D S HE  LR FD+NGV +NSSKDG +  V+ CEVEKI RRLS+L
Sbjct: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60

Query: 61  EEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA-------EDHDETLQLP 120
           EEDTRAMKKALF+SLEERRNLVYEINQQFQ I+K H L NEVA       EDHDETL  P
Sbjct: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120

Query: 121 EEWRRGAGLSQIFHHQPNISLVFKHFKPNLLAFSD 149
           +EWR G GLS+IFH Q NISLVFKHFKPNLLAF++
Sbjct: 121 KEWRGGVGLSEIFHRQANISLVFKHFKPNLLAFTN 155

[Close]

BLAST of CmaCh14G013700 vs. NCBI nr
Match: gi|659108415|ref|XP_008454187.1| (PREDICTED: uncharacterized protein LOC103494668 isoform X1 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 107/154 (69.48%), Postives = 121/154 (78.57%), Query Frame = 1


Query: 1   MAENQKRPLGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLL 60
           MAE+QKR   H  E D S HE  LR FD+NGV + SSK G   RV+ CEVE+I RRL++L
Sbjct: 1   MAEHQKRSHWHATEADGSSHEMVLRTFDRNGVAKYSSKSGSRSRVKACEVEQIGRRLTIL 60

Query: 61  EEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA------EDHDETLQLPE 120
           EEDTRAMKKALF+SLEER+NLVYEINQQFQ I+K H+LCNEVA      EDHDETL  P+
Sbjct: 61  EEDTRAMKKALFDSLEERKNLVYEINQQFQIINKSHELCNEVAALMASLEDHDETLHSPK 120

Query: 121 EWRRGAGLSQIFHHQPNISLVFKHFKPNLLAFSD 149
           E R G GLS+IFHHQ NISLVFKHFKPNLLAF+D
Sbjct: 121 ESRGGVGLSEIFHHQANISLVFKHFKPNLLAFTD 154

[Close]

BLAST of CmaCh14G013700 vs. NCBI nr
Match: gi|778689645|ref|XP_011652993.1| (PREDICTED: uncharacterized protein LOC105435163 isoform X2 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 4.4e-45
Identity = 97/132 (73.48%), Postives = 108/132 (81.82%), Query Frame = 1


Query: 24  LRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVY 83
           LR FD+NGV +NSSKDG +  V+ CEVEKI RRLS+LEEDTRAMKKALF+SLEERRNLVY
Sbjct: 3   LRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSILEEDTRAMKKALFDSLEERRNLVY 62

Query: 84  EINQQFQSISKHHQLCNEVA-------EDHDETLQLPEEWRRGAGLSQIFHHQPNISLVF 143
           EINQQFQ I+K H L NEVA       EDHDETL  P+EWR G GLS+IFH Q NISLVF
Sbjct: 63  EINQQFQIINKSHALYNEVAAALMASLEDHDETLHSPKEWRGGVGLSEIFHRQANISLVF 122

Query: 144 KHFKPNLLAFSD 149
           KHFKPNLLAF++
Sbjct: 123 KHFKPNLLAFTN 134

[Close]

BLAST of CmaCh14G013700 vs. NCBI nr
Match: gi|659108417|ref|XP_008454188.1| (PREDICTED: uncharacterized protein LOC103494668 isoform X2 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-44
Identity = 95/131 (72.52%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 24  LRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVY 83
           LR FD+NGV + SSK G   RV+ CEVE+I RRL++LEEDTRAMKKALF+SLEER+NLVY
Sbjct: 3   LRTFDRNGVAKYSSKSGSRSRVKACEVEQIGRRLTILEEDTRAMKKALFDSLEERKNLVY 62

Query: 84  EINQQFQSISKHHQLCNEVA------EDHDETLQLPEEWRRGAGLSQIFHHQPNISLVFK 143
           EINQQFQ I+K H+LCNEVA      EDHDETL  P+E R G GLS+IFHHQ NISLVFK
Sbjct: 63  EINQQFQIINKSHELCNEVAALMASLEDHDETLHSPKESRGGVGLSEIFHHQANISLVFK 122

Query: 144 HFKPNLLAFSD 149
           HFKPNLLAF+D
Sbjct: 123 HFKPNLLAFTD 133

[Close]

BLAST of CmaCh14G013700 vs. NCBI nr
Match: gi|700197771|gb|KGN52929.1| (hypothetical protein Csa_4G006360 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-35
Identity = 84/121 (69.42%), Postives = 93/121 (76.86%), Query Frame = 1


Query: 1   MAENQKRPLGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVEPCEVEKISRRLSLL 60
           MAE+QKR  GHG E D S HE  LR FD+NGV +NSSKDG +  V+ CEVEKI RRLS+L
Sbjct: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60

Query: 61  EEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA-------EDHDETLQLP 115
           EEDTRAMKKALF+SLEERRNLVYEINQQFQ I+K H L NEVA       EDHDETL  P
Sbjct: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120

The following BLAST results are available for this feature:

BLAST of CmaCh14G013700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh14G013700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVL6_CUCSA	1.7e-35	69.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006360 PE=4 SV=1	[more]
F6HXL8_VITVI	2.1e-09	32.65	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08110 PE=4 SV=...	[more]
V4S052_9ROSI	2.8e-06	36.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026559mg PE=4 SV=1	[more]
A0A067E0L0_CITSI	2.8e-06	36.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029773mg PE=4 SV=1	[more]
W9R3P4_9ROSA	4.7e-06	36.63	Uncharacterized protein OS=Morus notabilis GN=L484_025726 PE=4 SV=1	[more]

BLAST of CmaCh14G013700 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh14G013700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689642\|ref\|XP_011652992.1\|	5.7e-53	71.61	PREDICTED: uncharacterized protein LOC105435163 isoform X1 [Cucumis sativus]	[more]
gi\|659108415\|ref\|XP_008454187.1\|	1.2e-50	69.48	PREDICTED: uncharacterized protein LOC103494668 isoform X1 [Cucumis melo]	[more]
gi\|778689645\|ref\|XP_011652993.1\|	4.4e-45	73.48	PREDICTED: uncharacterized protein LOC105435163 isoform X2 [Cucumis sativus]	[more]
gi\|659108417\|ref\|XP_008454188.1\|	2.2e-44	72.52	PREDICTED: uncharacterized protein LOC103494668 isoform X2 [Cucumis melo]	[more]
gi\|700197771\|gb\|KGN52929.1\|	2.4e-35	69.42	hypothetical protein Csa_4G006360 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G013700.1	CmaCh14G013700.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G013700	Cla012742	Watermelon (97103) v1	cmawmB232
CmaCh14G013700	Csa4G006360	Cucumber (Chinese Long) v2	cmacuB260
CmaCh14G013700	MELO3C017845	Melon (DHL92) v3.5.1	cmameB244
CmaCh14G013700	ClCG07G012260	Watermelon (Charleston Gray)	cmawcgB242
CmaCh14G013700	CSPI04G01920	Wild cucumber (PI 183967)	cmacpiB263
CmaCh14G013700	CmoCh14G014060	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G013700	Lsi07G004240	Bottle gourd (USVL1VR-Ls)	cmalsiB256
CmaCh14G013700	CsaV3_4G001890	Cucumber (Chinese Long) v3	cmacucB0298
CmaCh14G013700	Cla97C07G139040	Watermelon (97103) v2	cmawmbB275
CmaCh14G013700	Bhi01G002800	Wax gourd	cmawgoB0318
CmaCh14G013700	Carg06525	Silver-seed gourd	carcmaB0154

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G013700	Cucurbita maxima (Rimu)	cmacmaB254
CmaCh14G013700	Cucurbita maxima (Rimu)	cmacmaB257
CmaCh14G013700	Cucumber (Gy14) v1	cgycmaB0193
CmaCh14G013700	Cucurbita moschata (Rifu)	cmacmoB249
CmaCh14G013700	Cucurbita moschata (Rifu)	cmacmoB256
CmaCh14G013700	Wild cucumber (PI 183967)	cmacpiB279
CmaCh14G013700	Melon (DHL92) v3.5.1	cmameB221
CmaCh14G013700	Watermelon (Charleston Gray)	cmawcgB217
CmaCh14G013700	Watermelon (97103) v1	cmawmB220
CmaCh14G013700	Cucurbita pepo (Zucchini)	cmacpeB281
CmaCh14G013700	Cucurbita pepo (Zucchini)	cmacpeB282
CmaCh14G013700	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G013700	Cucurbita pepo (Zucchini)	cmacpeB286
CmaCh14G013700	Bottle gourd (USVL1VR-Ls)	cmalsiB238
CmaCh14G013700	Cucumber (Gy14) v2	cgybcmaB485
CmaCh14G013700	Cucumber (Gy14) v2	cgybcmaB915
CmaCh14G013700	Melon (DHL92) v3.6.1	cmamedB250
CmaCh14G013700	Melon (DHL92) v3.6.1	cmamedB278
CmaCh14G013700	Silver-seed gourd	carcmaB0274
CmaCh14G013700	Silver-seed gourd	carcmaB0276
CmaCh14G013700	Silver-seed gourd	carcmaB1418