CmaCh13G000310 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G000310
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	Cma_Chr13 : 380617 .. 381075 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATAGTTTAAGGCATTGTCTGGGTTGTGTTCTTCCCTGTGGCGCTTTGGACTTGATCAGAGTGGTTCATCTCAACGGCCATGTCCAGGAATTCTCTCCGCCCATCGCCGCCGCCGAGATCCTAGATGCCAATCCTGGACACGTCCTCACCACTCCCTCCGACGACCACCACCACCTCGTCCGTCACGTTACCATTCTCTCCCCCGAATCTAACCTCCGTCGTGGCGGCATTTATTTCTTGATTCCGGCCAGCTCCGACCACCGGAAGGCTGCCAAAAAGCCCTCCTCCGCCACCTCCAGCGACGCGGTTTTCCCAGAACCCAACGATCTCACCCACCGGATGGAGGATGTCATTGTCTTCAAGAAGGCTAAACCTGGCCGCCGAGATCGTCGGAGCAGCCGCGCCGGCAGTGGCGCGTGGCGGCCTCATCTACTGAGCATTAATGAAGATTAA

mRNA sequence

ATGGGGAATAGTTTAAGGCATTGTCTGGGTTGTGTTCTTCCCTGTGGCGCTTTGGACTTGATCAGAGTGGTTCATCTCAACGGCCATGTCCAGGAATTCTCTCCGCCCATCGCCGCCGCCGAGATCCTAGATGCCAATCCTGGACACGTCCTCACCACTCCCTCCGACGACCACCACCACCTCGTCCGTCACGTTACCATTCTCTCCCCCGAATCTAACCTCCGTCGTGGCGGCATTTATTTCTTGATTCCGGCCAGCTCCGACCACCGGAAGGCTGCCAAAAAGCCCTCCTCCGCCACCTCCAGCGACGCGGTTTTCCCAGAACCCAACGATCTCACCCACCGGATGGAGGATGTCATTGTCTTCAAGAAGGCTAAACCTGGCCGCCGAGATCGTCGGAGCAGCCGCGCCGGCAGTGGCGCGTGGCGGCCTCATCTACTGAGCATTAATGAAGATTAA

Coding sequence (CDS)

ATGGGGAATAGTTTAAGGCATTGTCTGGGTTGTGTTCTTCCCTGTGGCGCTTTGGACTTGATCAGAGTGGTTCATCTCAACGGCCATGTCCAGGAATTCTCTCCGCCCATCGCCGCCGCCGAGATCCTAGATGCCAATCCTGGACACGTCCTCACCACTCCCTCCGACGACCACCACCACCTCGTCCGTCACGTTACCATTCTCTCCCCCGAATCTAACCTCCGTCGTGGCGGCATTTATTTCTTGATTCCGGCCAGCTCCGACCACCGGAAGGCTGCCAAAAAGCCCTCCTCCGCCACCTCCAGCGACGCGGTTTTCCCAGAACCCAACGATCTCACCCACCGGATGGAGGATGTCATTGTCTTCAAGAAGGCTAAACCTGGCCGCCGAGATCGTCGGAGCAGCCGCGCCGGCAGTGGCGCGTGGCGGCCTCATCTACTGAGCATTAATGAAGATTAA

Protein sequence

MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHHLVRHVTILSPESNLRRGGIYFLIPASSDHRKAAKKPSSATSSDAVFPEPNDLTHRMEDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED

Homology

[Close]

BLAST of CmaCh13G000310 vs. TrEMBL
Match: A0A0A0LYB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533440 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 8.1e-51
Identity = 109/156 (69.87%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H 
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPAS-SDH---RKAAKKPSSATSSDAVFPEPNDLTHRM 120
           LVR V ILSP+S+LRRGGIYFLIPA  SDH   +  AKK SSA S   VFPE        
Sbjct: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPE-------S 120

Query: 121 EDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
           EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Sbjct: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149

[Close]

BLAST of CmaCh13G000310 vs. TrEMBL
Match: B9INS0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14490g PE=4 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 7.7e-33
Identity = 84/163 (51.53%), Postives = 104/163 (63.80%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIRVVHLNGHV+E + PI AAE+L ANP HVL+ PS     
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRVVHLNGHVEEITGPITAAEVLKANPNHVLSKPSS--QS 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASS---DHRKAAKKPSSATSSDA--------VFPEP 120
           +VR + ILSPES L+RG IYFLIP+SS   + +K     S  + S +        +  + 
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPSSSLPGEKKKGGNNCSHKSKSSSKKSKKYCNINKDV 120

Query: 121 NDLTHRMEDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
            D    +  ++   + KP RRDRR+SR     WRPHL SI+ED
Sbjct: 121 QDCDRHLNALV--SEKKPSRRDRRTSRV--RVWRPHLQSISED 157

[Close]

BLAST of CmaCh13G000310 vs. TrEMBL
Match: A0A0A0KBY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G217470 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-32
Identity = 87/160 (54.37%), Postives = 103/160 (64.38%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNGHV+E + PI A ++L ANP HVL+ PS     
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSS--QG 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASS---DHRKAA---KKPSSATS--SDAVFPEPNDL 120
           +VR + ILSPES L+RG IYFLIP++S     R AA   K PS      + A  P   D 
Sbjct: 61  VVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTADT 120

Query: 121 THRMEDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
              + DV+  K  KP RR+RR SR     WRPHL SI+ED
Sbjct: 121 DSYLSDVVSDK--KPSRRERRGSRV--IVWRPHLESISED 154

[Close]

BLAST of CmaCh13G000310 vs. TrEMBL
Match: B9I6L4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s14930g PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-32
Identity = 84/162 (51.85%), Postives = 104/162 (64.20%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNG+V+E + PI AAE+L ANP HVL+ PS     
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITGPITAAEVLKANPNHVLSKPSS--QG 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASS---DHRKAA-------KKPSSATSSDAVFPEPN 120
           +VR + ILSPES L+RG IYFLIP+SS   D +K+        K  S  +       +  
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPSSSLPGDKKKSGNNCGHQMKSSSKKSKRYCNNKDAR 120

Query: 121 DLTHRMEDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
           D    + D++  KK+   RRDRR+ R   G WRPHL SI+ED
Sbjct: 121 DCDRYLTDIVSEKKS--SRRDRRTGRV--GVWRPHLQSISED 156

[Close]

BLAST of CmaCh13G000310 vs. TrEMBL
Match: M5WKE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012908mg PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-32
Identity = 83/154 (53.90%), Postives = 98/154 (63.64%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNG+V+E S  + A EIL+ANP HVL+ PS     
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEISHSVTAGEILEANPNHVLSKPSS--QG 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASSDHRKAAKKPSSATSSDAVFPEPN--DLTHRMED 120
           +VR + ILSPE+ L+RG IYFLIP SS   K  K  +S     +     N  + T R   
Sbjct: 61  VVRRILILSPETELKRGSIYFLIPTSSIPEKKKKSKTSGVKKPSKKSTKNHTESTDRYLM 120

Query: 121 VIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
            IV +K    RRDRR+ RA    WRPHL SI ED
Sbjct: 121 EIVTEKKSSSRRDRRAGRA--TVWRPHLESITED 150

[Close]

BLAST of CmaCh13G000310 vs. TAIR10
Match: AT2G30230.1 (AT2G30230.1 unknown protein)

HSP 1 Score: 135.6 bits (340), Expect = 2.6e-32
Identity = 82/177 (46.33%), Postives = 97/177 (54.80%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNGHV E + P+ A EIL ANP HVL+ P      
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQG-- 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIP-ASSDHRKAAKKPSSATSSDAVFPEPNDLT------ 120
           +VR + ILSPES L+RG IYFLIP  S   +K  KK              ND+       
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVST 120

Query: 121 -------------HRMEDVIVFKK----AKPGRRDRRSSRAGS-GAWRPHLLSINED 153
                          +EDV++ +K     K  R  R+ SR+ S   WRPHL SI ED
Sbjct: 121 NKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSITED 175

[Close]

BLAST of CmaCh13G000310 vs. TAIR10
Match: AT1G06980.1 (AT1G06980.1 unknown protein)

HSP 1 Score: 125.2 bits (313), Expect = 3.5e-29
Identity = 82/169 (48.52%), Postives = 96/169 (56.80%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNG+V+E +  I A EIL ANP HVL+ P      
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCSQG-- 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASSDHRK--------AAKKPSSATSSDAVFPEPND- 120
           +VR + ILSPES L+RG IYFLIP SS   K          KK     S+DA   E    
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKGD 120

Query: 121 ------LTHRMEDVI-VFKKAKPGRRDRRSSRAGS-GAWRPHLLSINED 153
                     +E+V+      K  R  RR SR+ S   WRP L SI+ED
Sbjct: 121 EECVKLCEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWRPLLDSISED 167

[Close]

BLAST of CmaCh13G000310 vs. TAIR10
Match: AT1G29195.1 (AT1G29195.1 unknown protein)

HSP 1 Score: 97.4 bits (241), Expect = 7.8e-21
Identity = 64/190 (33.68%), Postives = 91/190 (47.89%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVL---TTPSDD 60
           M  ++R C+ C+LPCGALD+IR+VH NGHV+E S  I A+EI+ A+P HVL   ++P+ D
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  HHH----LVRHVTILSPESNLRRGGIYFLIPASSDHRKAAKKPSSATSSDAVFPEPNDLT 120
           H          + I+ PE+ L+RG IYFL+PA+   + A         S+A         
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 HRMEDVIVFKKAKPG--------------------------------RRDRRSSRAGSGA 152
           +R +     +K   G                                ++DRR  R   G 
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVATQKDRRKGRV--GV 180

[Close]

BLAST of CmaCh13G000310 vs. NCBI nr
Match: gi|778661798|ref|XP_011658739.1| (PREDICTED: uncharacterized protein LOC105436080 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 109/156 (69.87%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H 
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPAS-SDH---RKAAKKPSSATSSDAVFPEPNDLTHRM 120
           LVR V ILSP+S+LRRGGIYFLIPA  SDH   +  AKK SSA S   VFPE        
Sbjct: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPE-------S 120

Query: 121 EDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
           EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Sbjct: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149

[Close]

BLAST of CmaCh13G000310 vs. NCBI nr
Match: gi|743897110|ref|XP_011041838.1| (PREDICTED: uncharacterized protein LOC105137704 [Populus euphratica])

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33
Identity = 85/163 (52.15%), Postives = 105/163 (64.42%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIRVVHLNGHV+E + PI AAE+L ANP HVL+ PS     
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRVVHLNGHVEEITGPITAAEVLKANPNHVLSKPSS--QS 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASS---DHRKAAKKPSSATSSDA--------VFPEP 120
           +VR + ILSPES L+RG IYFLIP+SS   + +K     S  + S +        +  + 
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPSSSMPGEKKKGGNNCSHKSKSSSKKSKKYCNINKDV 120

Query: 121 NDLTHRMEDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
            D    + D++   + KP RRDRR+SR     WRPHL SI+ED
Sbjct: 121 QDCDRHLNDLV--SEKKPSRRDRRTSRV--RVWRPHLQSISED 157

[Close]

BLAST of CmaCh13G000310 vs. NCBI nr
Match: gi|1000954626|ref|XP_015578139.1| (PREDICTED: uncharacterized protein LOC107261688 [Ricinus communis])

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33
Identity = 83/162 (51.23%), Postives = 101/162 (62.35%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNG+V+E + PI AAEIL ANP HVL+ P      
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITHPITAAEILKANPNHVLSKPCSQG-- 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASS----------DHRKAAKKPSSATSSDAVFPEPN 120
           +   + ILSPES L+RG IYFLIPASS           H+K ++K     S D      +
Sbjct: 61  VGHKILILSPESELKRGSIYFLIPASSLPDKKKNSSNTHKKYSRKSKKCNSDDI-----S 120

Query: 121 DLTHRMEDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
           +    + D+I+    K  RRDRR+ R   G WRPHL SI+ED
Sbjct: 121 NCDRYLTDIIISSNNKSSRRDRRTGRV--GVWRPHLQSISED 153

[Close]

BLAST of CmaCh13G000310 vs. NCBI nr
Match: gi|657951821|ref|XP_008354594.1| (PREDICTED: uncharacterized protein LOC103418232 [Malus domestica])

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 84/154 (54.55%), Postives = 100/154 (64.94%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNG+V+E S P+ A EIL+ANP HVL+ PS     
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEISHPVTAGEILEANPNHVLSKPSSQG-- 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASS--DHRKAAKKPSSATSSDAVFPEPNDLTHRMED 120
           +VR + ILSPES L+RG IYFLIP+SS  + RK +K       S       +D T R   
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPSSSVPEKRKKSKSNGIKKPSKKSSKSQSDSTDRYLT 120

Query: 121 VIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
            IV +K    RRDRR+ R     WRP+L SI ED
Sbjct: 121 EIVTEKKFTSRRDRRAGRV--AVWRPNLESITED 150

[Close]

BLAST of CmaCh13G000310 vs. NCBI nr
Match: gi|1021547778|ref|XP_016165388.1| (PREDICTED: uncharacterized protein LOC107608009 [Arachis ipaensis])

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 87/165 (52.73%), Postives = 109/165 (66.06%), Query Frame = 1


Query: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60
           MGNSLR CL CVLPCGALDLIR+VHLNG+V+E + PI A E+L ANP HVL+ PS +   
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITGPITAGEVLKANPNHVLSKPSSE--G 60

Query: 61  LVRHVTILSPESNLRRGGIYFLIPASS---DHRK-----AAKKPSSATSSDAVFPEPNDL 120
           +VR + ILSPE+ L+RG IYFLIPASS   D R+     + KK SS T S+    E +D 
Sbjct: 61  VVRRILILSPETELKRGSIYFLIPASSLPADKRRHMNGSSCKKGSSITKSNH-HKETSDH 120

Query: 121 THR-----MEDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 153
           + R       +++   K    RRDRRS+   SG+W+PHL SI ED
Sbjct: 121 SRRQNVPIQNEIVSKDKRCSRRRDRRSNGGRSGSWQPHLESILED 162

The following BLAST results are available for this feature:

BLAST of CmaCh13G000310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh13G000310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYB2_CUCSA	8.1e-51	69.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533440 PE=4 SV=1	[more]
B9INS0_POPTR	7.7e-33	51.53	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14490g PE=4 SV=2	[more]
A0A0A0KBY5_CUCSA	1.0e-32	54.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G217470 PE=4 SV=1	[more]
B9I6L4_POPTR	1.0e-32	51.85	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s14930g PE=4 SV=1	[more]
M5WKE6_PRUPE	1.3e-32	53.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012908mg PE=4 SV=1	[more]

BLAST of CmaCh13G000310 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30230.1	2.6e-32	46.33	unknown protein	[more]
AT1G06980.1	3.5e-29	48.52	unknown protein	[more]
AT1G29195.1	7.8e-21	33.68	unknown protein	[more]

BLAST of CmaCh13G000310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778661798\|ref\|XP_011658739.1\|	1.2e-50	69.87	PREDICTED: uncharacterized protein LOC105436080 [Cucumis sativus]	[more]
gi\|743897110\|ref\|XP_011041838.1\|	1.3e-33	52.15	PREDICTED: uncharacterized protein LOC105137704 [Populus euphratica]	[more]
gi\|1000954626\|ref\|XP_015578139.1\|	2.2e-33	51.23	PREDICTED: uncharacterized protein LOC107261688 [Ricinus communis]	[more]
gi\|657951821\|ref\|XP_008354594.1\|	2.9e-33	54.55	PREDICTED: uncharacterized protein LOC103418232 [Malus domestica]	[more]
gi\|1021547778\|ref\|XP_016165388.1\|	2.9e-33	52.73	PREDICTED: uncharacterized protein LOC107608009 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G000310.1	CmaCh13G000310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..151 score: 1.5
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..152 score: 4.4
None	No IPR available	PANTHER	PTHR33052:SF26	SUBFAMILY NOT NAMED	coord: 2..152 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G000310	Cucsa.151780	Cucumber (Gy14) v1	cgycmaB0417
CmaCh13G000310	Cla013399	Watermelon (97103) v1	cmawmB209
CmaCh13G000310	Cla008137	Watermelon (97103) v1	cmawmB190
CmaCh13G000310	Csa1G533440	Cucumber (Chinese Long) v2	cmacuB211
CmaCh13G000310	MELO3C020520	Melon (DHL92) v3.5.1	cmameB201
CmaCh13G000310	ClCG02G019220	Watermelon (Charleston Gray)	cmawcgB189
CmaCh13G000310	ClCG03G000440	Watermelon (Charleston Gray)	cmawcgB199
CmaCh13G000310	CSPI01G24180	Wild cucumber (PI 183967)	cmacpiB213
CmaCh13G000310	CmoCh02G007120	Cucurbita moschata (Rifu)	cmacmoB232
CmaCh13G000310	Lsi10G014670	Bottle gourd (USVL1VR-Ls)	cmalsiB196
CmaCh13G000310	Cp4.1LG20g07720	Cucurbita pepo (Zucchini)	cmacpeB235
CmaCh13G000310	Cp4.1LG05g09900	Cucurbita pepo (Zucchini)	cmacpeB249
CmaCh13G000310	MELO3C020520.2	Melon (DHL92) v3.6.1	cmamedB222
CmaCh13G000310	CsaV3_1G036480	Cucumber (Chinese Long) v3	cmacucB0242
CmaCh13G000310	Cla97C02G045190	Watermelon (97103) v2	cmawmbB220
CmaCh13G000310	Bhi08G000392	Wax gourd	cmawgoB0274
CmaCh13G000310	Bhi10G000669	Wax gourd	cmawgoB0244
CmaCh13G000310	CsGy1G023660	Cucumber (Gy14) v2	cgybcmaB069

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh13G000310	CmaCh02G007100	Cucurbita maxima (Rimu)	cmacmaB228

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G000310	Cucumber (Chinese Long) v3	cmacucB0250
CmaCh13G000310	Watermelon (97103) v2	cmawmbB225
CmaCh13G000310	Wax gourd	cmawgoB0252
CmaCh13G000310	Cucurbita maxima (Rimu)	cmacmaB220
CmaCh13G000310	Cucurbita maxima (Rimu)	cmacmaB235
CmaCh13G000310	Cucumber (Gy14) v1	cgycmaB0418
CmaCh13G000310	Cucurbita moschata (Rifu)	cmacmoB238
CmaCh13G000310	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G000310	Cucurbita moschata (Rifu)	cmacmoB226
CmaCh13G000310	Wild cucumber (PI 183967)	cmacpiB220
CmaCh13G000310	Cucumber (Chinese Long) v2	cmacuB219
CmaCh13G000310	Melon (DHL92) v3.5.1	cmameB194
CmaCh13G000310	Watermelon (Charleston Gray)	cmawcgB194
CmaCh13G000310	Watermelon (97103) v1	cmawmB185
CmaCh13G000310	Cucurbita pepo (Zucchini)	cmacpeB231
CmaCh13G000310	Cucurbita pepo (Zucchini)	cmacpeB239
CmaCh13G000310	Bottle gourd (USVL1VR-Ls)	cmalsiB201
CmaCh13G000310	Cucumber (Gy14) v2	cgybcmaB075
CmaCh13G000310	Melon (DHL92) v3.6.1	cmamedB215
CmaCh13G000310	Silver-seed gourd	carcmaB0462
CmaCh13G000310	Silver-seed gourd	carcmaB0728
CmaCh13G000310	Silver-seed gourd	carcmaB0939